DCARv2 Gene annotation V1.0 locations on DCARv3 assembly

Resource Type: 
File
File Type: 
GFF3
Download: 
Download File NameAvailable atSizeMD5
30.dcar-1-to-3.gff3.gzCarrotOmics3.83MBe3e08978a5a99e560bb9b977fcd4d3fa
Description: 

DCARv2 Gene annotation V1.0 locations on the DCARv3 assembly. This is the GFF3 file used for JBrowse. See the linked analysis below for further details.

References: 
The following records refer to this file:
Analysis
Project
Project: 
NameDescription
Improved Hybrid de novo Genome Assembly, Gene Prediction and Annotation of Carrot

The project goals are to improve the assembly of the genome of cultivated carrot, and improve gene predictions using this improved assembly.
Analysis: 
NameDescription
DCAR Gene annotation V1.0 locations on Carrot Genome Assembly DH1 V3.0

Gene predictions from the Carrot Genome Assembly DCARv2 were transferred to the Carrot Genome Assembly DCARv3 using GMAP. Organellar annotations were transferred separately using CrossMap with manual corrections for trans-spliced genes.
License: 
NameAttribution 4.0 International (CC BY 4.0)
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