DCAR_001540 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_001540

Identifier:

DCAR_001540.gene

Locus Tag:

DCAR_001540

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 2 relationships.
Relationships
The mRNA, DCAR_001540, is a part of gene, DCAR_001540.
The genetic_marker, MK004074 K1518, is located in gene, DCAR_001540.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_001540	DCAR_001540.mRNA	mRNA	DCARv2_Chr1:17206061..17210888

Sequence:

TGAAACTACTACCGTATACGTATTGCAAAATGTCCAATAATGTTAGCGTG
CGTGTTTGATACAGTAGCTCCTGTTTCTCCCTCAACTCCCTATTTTCTCT
GCACTACTCTCTCTCTACACTATTACTATTTCTCTCTCTTAGGACTTCCT
CCAACACGCCTCTCTCTCCCCAACCTTTGTACAAATATATATCAAGCTCG
TAGTGTTTTTCCTTCAGTTTGACAAGTTTATATGCTGAAATTTGGAGTTG
TCCTCGTTTAAATCCTCCTAATTTGTCGAAACTTCGATTCGATCGTTGAA
TTGTATTTAGCTCTATTGCAATCTCTGATTCTTCATCTATCTGTAAGTAT
TGCCCAATCTCTAATCCATTAAAAGTTTTTGTTTGATACTTATATATTAT
TGAGTTATTTTTAGATTTTGTGGTAGGTATATTAAGTCTGTCATTTTAAT
TTCGCCGTAGAATCTGGTGAATAATTTTTATGTATTGGGAAATGTAAATT
CGTCGTGATTGCAGTATACTGTCATTGCTGAGGAATTTGTTCACAAATAT
GTCTTGATTGTAAGGTAGAACCCGATAAAGTAATAATTGACAAATAAATA
ATCTCGATTAGTTAATTATGTTCATGGTTCAATAGATAAGGGGATAGTTG
TAACCTTAATAAAATTCTCAGGTCCTGATACCACTGGTTTATAGAGTTTT
CACCTTAGTTTGTGGGTTGAAATGTTATCAATTGTCTTCTGTGATTAATT
TATTCTCTTGTTAAGTGCAAGTTGCGCAAAGTGGTTGAATGTAAATTTTG
TATATGTCCAATAATATATGTTGAGCAGCTACTTTTATTTGGAATATAAA
GATGTTCGTACATGCTTACTGTTAACCGTTGTACAGTCTAATGGACAATA
TGAAGTCTTGGACGGTATATAAAAATGTTGTAGTGGGAGATAGGAATAGA
ATTTTCTGTTTGTATTATTTTAATTTTAAAAATATTTTAGCAGTTTTGTT
ATAAATAAAGAAAGCAGGATTTATATCTCTGTATTCTGGAGATCCTAAAA
AGTTTTCTGGTAGATTAATCTGCAATTAACTAGTTATTTATTGCTTGTAA
ATTATGATATAGAACATGAAAAGAAAACATTAATAAAACCACAAGATTAC
CAGCAAACTGGCAAAAGACAAGCAAAGAAAACATGATTATATATTTATAT
GAAGTTCATTAATTGTAGTGAGTCATTATTCCTATTAAAATTATCGACCA
GTAATCAATGTAAGCAAGTAATAATGAAGAATGATGTGAAAATCTAATCA
ATTAAATAAAAAAGAGTGAGAACTCAATCTTAATATACAGGCCTGTAATC
TAACTCTTTTTAATATAAGTAAACTATGTGTTTGACTAGAATCTGATAGT
AAAAACATATAGTGTATTACTTACTATGAGACAAGCATATATACTATTAC
ACATTACACACTTGAGTTTTTAAATTGGTAGAAAAATATTTTAATCATTT
ACTCACAATATGTTGAAGGAATAATATTAAAAACAATCAATGTAATTTTC
TAGGCGCCAAATTGTGCACCCTCAGTCATAATTCCACCAGTCAAAATTAG
ATGCCATAGGAGCTATTCAACATTTATGGACATTGGTGATTTATTAGAAT
TTTTTTTTGTCACTCTTTCAGAAGCTACTTATAGTTCTAAGAAGCAATGG
ATTTGTCTAGTTAGAATATACTCTCAGGAAACAAACACTTTAACTAACTA
AAGATTCCTCAGACTGATATGTTCAGTCATTCTTAGCTGCTTGCATATTA
TTATCCGTAATCCCCTTTCACTCTGTGATAAGATATTATTAATATTTCTC
TCTCTTAGGACTTCCTCCAACACGCCTCTCTCTCTCTCCCACCAACCTTT
GTACAAATATATATCGAGCTCATAGTGTTTTTCCTTCAGTTTGACAAGTT
TATATGCTGAAATTTGTAGCTGTCCTCGTTTAAATCCTCCTAATTTGTCG
AAACTTCGATTGGATCGTTGAATTGTATTTAGCTCTATTGCAATCTCTGA
TTCTTCATCTATCTGTAAGTATTGCCCAATCTCTAATTCATTAAAAGTTT
TTGTTTAATACTTATATATTGTTGAGTTATTTTTAGATTTTGTGCTGGGT
ATATTAAGTCTGTCATTTCAGTTTCGCCGTAGAATCTGGTGAATAATTTT
TATGTATTGGGAAATGTAAATTCGTCGTGATTGCAGTATACTGTCATTGC
TGAGGAATTTGTTCACAAATATGTCTTGATTGTAAGGTAGAACCCGATAA
AGTAATAATTGACAAATAAATAATCTCGATTAGTTAATTATGTTCATGGT
TCAATAGATAAGGGGATAGTTGTAACCTTAATAAAATTCTCAGGTCCGGA
TACCACTGGTTTATAGAGTTTTCTCTGTAGTTTGTTGGTTAAAATGTTAT
CAATTGTCTTCTGTGATTAATTTATTCTCTTGTTAAGTGCAAGTTGCGCA
AAGTGGTTGAATGTTAATTTTGTATATGTCCAATAATATATGTTGAGCAG
CTACTTTTATATGGAATATAAAGATGTTCGTACATGCTTACTGTTAACCG
TTGTACAGTCTCATGGACAATATGAAGTCTTGGACGGTATATAAAAATGT
TGTAGTGAGAGATAGGAATAGAATGTTGTGTTTGTATTATTATAATTTTT
AAAATATTTTAGCAGTTTTGTTATAAATAAAGAAAGCAGGATTTATATCT
CTGTATTCTGGAGATCCTAAAAAGTTTGCTGGTAGATTAATCTGCAATTA
ACTACTTATTTATTGCTTGTAATTATGATATAGAACATTAAATGAAAACA
TTAATAAAACTACAAGATTACCATCAAACTGGCAAAAGACAACCAAAGAA
AACATGATCATATGAATTTCATTAATTGTTGTCAGTTATTATTCCTACTC
CCTCTGTTTCAAAATACATGTCCACTTTAGAAAAAAATATTTGTTTCAAA
ATTCTTGTTCACTTCAACTTTCAATGTAAATCTATATTTCCAAAATCAAC
TCTCCTTCACATATTTCAAATTTATATTTCCAAGACCAACCCTATACCAC
ATATTAGGTTCAATTAATGACTTGATGTACCTCTTTTTTCTCAAAATCCA
CTTTTCTTAAACTATGTGATTTTTTGAAAGTGGACATGTAATCTGAAACG
GAGGGAGTATTAAAATTATCGACCAGTGATCAATTTAAGATAGTAATAAT
GAAGACTGATGTAAAAGTCTAATCAGTTAAATAAAAAAGAATGAGAACTC
AATCTTAATATACCGGCCTGTAATCTAACTTTTTTTTAATATAAGTTAAC
TATGTGTTTGATTAGAATCTGATAGTAAAAACATATAGTATATTACTTAC
TATGAGACAAGCTTATATACTATTACACATTACACACTAGACAAGCATAT
TTAGCTGAAAATTTTCCTAAATAAGTATTCTCATAAAATTGTAGCTCTAT
TTTAGAATCAGAAGGGAGAACTGTTATCAATGACCCTTTTGGTCTTTGTT
TTATGAAAATCACTCTTTACATACCCGTCATCTTGATTTAGTTGAAATAT
AGTATCAGTGATATTCTTTCTTGTCCCCCCTGATTTAGCGTCTTCTACCT
TTAGTAGAATAAACTAGAGTGTGAAGGAAGTCTTAGAATCTCTTTCATTA
ATTAACCTGTAGTCAAACATTGCCGGTATGGCAGAACTGGGCAAAAGTGG
TATGCAGCAAAAAAACTTGTAACCAAGCTTTTTGTGATGCACTTTATTAA
GTGGATTATGATTATAATTTTACAACAATTAAGCAGGAGACAGCTTTGTT
GAATCTTTGCTGATGTATTTGCAACTGCATTTTTCTTTGTTTCTTGTTTA
TTAATGCGTCTTTTTCATAAGAACTGATCATGGTCTAACATGTAGTATGG
CTGGACAAGTAGCTTTCAATCAATCACCTGCTCCTTCTGAGGACTTTGAG
ATTGTTTATGGTGATTTTAAAGTAGCATCCCAAGCTCAGTGTAGTCCTCT
AATTGATCCTTCAACTATAAAACTTAGACATAGACTCGGAAGAGGTCCAT
TTGGTGATGTTTGGTTAGCAACTCTTCATCAGACAGCTGAAGATTACGAA
GAGTATCATGAAGTGGCTGTGAAGATGTTACATCATGTTAAGGAAGATAG
CATTAGAACAGTATTAGATAAGCTGGCTGAGTTATTTTTCAAGAGTAGAG
GACTAAAGGGTGTTTGTTGGATGTATGGCACTTCAATTATAAGTGGCAAG
GTATGTAAATTTCCTTCATCAGCTTTTACTGTTGGACTGTAGTCCAACTT
TTTGTACTCTCTAGTCTCTACTAAAGTTTCTATCCTTTTTCTAGATATGT
ATAGTTATGAAATTCTATGAGGGATCCGTTGGTGACAAGATGGCTCGCCT
TAAAGGGGGGAAGCTCTCATTGCCTGATGTTCTGAGGTGGTGTTTATATT
CTGTCTGTGTGGATATACGTTTTATGGTCTTTCTATTGCATTTGAATTTA
TTTTTTTGAAATTTAATATTGAAATTGTATTTTCCATCTTAATATTGATA
TCTGTAGGCATGGAATTGATCTGGCTCAGGGAATTAGGGAAATGCATTCG
AAAGAGATTATGGTCCTGAACCTTAAACCCTGCAATTTCCTTTTGAATGA
AAATAACCAATCAATTTTGGGGGATTTGGGAATTGCATATGTACTTATGG
GGATTCCATTGCCGAGTTCAGATCTGACTCGTAGGCTTGGAACACCAAAC
TATATGGCTCCTGAACAATGGGAACCAGGTACAAGAGGTCCAATATCCTA
TGAGACAGACTCTTGGGGATTTGCTTGCAGCATTGTTGAGATGCTGACTG
GTACACAGCCTTGGTGTGGTATGTCTATTGATAACATATACAAGACTGTA
GTTGAAAAGCAAGAAAAGCCGTTCATACCTGAAGGTCTTCCTTCAGAGCT
GGAGAATGTTATCCTTGGCTGTTTTGAGTATGACTTCAGGAGCCGTCCAT
TAATGTCAGATATATTAAATGCTTTCAAAAGGTACGTTCCTAATACTTGT
TCCATTTTCTTCATTTCAGGCTCCCTGCTATTTAGCGGTTTTATCCAATT
AAATTATGGTCATGGACTGGGGCCCCAGTAAAATTAAAATTTCTTTAACT
GCATAATTACTACATTCGATCTTATACTATACACACTTTAATAAGATATG
ATTACGAAATCCATTACTGTGAGAAGATCCATGAGCTTCGAGGTGAAGTG
TTGGAACCAACCACAAGGTTATTAATGTGTCGATGTTGAGATAAACTGTT
ACTAAAAGAAGATATGGGTGGAATATGTGGAATCAGATTATGTATTTAAA
GCACTATTTGTACTTGAATTATATTAGTAAAATGTGCCATAACATGCTTT
TTAAAGCAGCAGTTGTAGTATAGATCAGTATTATTAAACGCAATATTCAG
ATAAAAAGCGCAAAGGCCCCTTTGGAGCCGCGCAATGCGGGGATATATCA
AAGACAAATAAATATACATATATAAATGATATATAATGTAGAATATAGTT
ATTTTATAGATAAGAAGACTTTAAATTGATAAAGCAACCAAATTCATCAT
CATATAGATCCAAAGTAGAACAATTTGAATTAGTTGGTCCATTTTTCTTC
TTCTTCATCATCCATATCCACAAAATCATCATCTTCACTATATGATTCGG
ATCCTCGACAATGTCTTCTTCATCCTCAAGTCGTATGTGTATATACAACA
ATGTATGTATGAATTAATCAGTATATACAAGATACTAGTTTTTTACTCTG
CCACATAGTACCCCTTGCATCTAGGTAACTTAGATCTTCATCATTAAAGT
TGAAGAGATTTTTTACAATCCCCCACCCATGCTCAGGGGTGGCAAAATCC
GACACTACTCGAAACCCGACACGAACGCTGACTTGAAAAATTCGAATGAG
GCTTGGGTTTTTATACTTTGAGCCAGGTTCGGGTTGTGTAATTTTTTACC
TGAAAAACTCGGGTCAAGTTCGCATTGACCCGTACCCGACCCCGACCCGA
AATATTCATGTATATAATATATTATATATAATATATATCTATATTAGACA
ATTGCATACATTTTTCGTATTTATATATTAAAACAAATTTATCCACTTAT
AATCTCATTAAATTATTATTATTATTATTTTAATATATTATAATAAAATA
CAATTTTATATAACAAAATTAATTAATTTTAATTAAATTTCGGGTTGACT
CGAGTCATTTCGAGTTGATCGGGTACTGAACAGGTCGGGTTCGGGTTAAA
ATTTTCAACCCATTTCTGGATCGGGTTGACCCAAAAAATGGATCGGGTAA
GACCTGTTACCCGGAATTGCCAACCTACCCATGCTATCCAGTGGGGAGAA
AATAATAAGTAACAACAAATAATAGTATTAGTTAATTTATGTCCATAAGT
AATTTATGATTTATGCCCACATGCCGGGACGGATTTAGAAGGGGGGCAGT
GGAGGTACCCACTGACCCTCATAAAAGATATATATATTTCTACTATCATT
CTCACCAAATTGTTTATTTGCCCCCATGGTTGAGGTGTTCTATGTTAACC
AAGGAGGTACAGCTTCGATTTCTTCTTGTTGTTTTTATACCAAATTTTTT
GACCCTCTTCTTTTCTTTTCCTCTGTTATATTTTGACCCCACTACTTCAA
AAGTCTAGCTCCGTCCCTGCCCAGAGGTATTACATGGAATGGAAAAGTGT
TATGGTAGGATGGTAGATGAATTTTTTTCCCCCCTTAATGACTACTCATC
CCATAGTTTAGAAAAAGTGGGGTTAAAACTTGTAAGTGTGATTAAAACAT
GAATTAGAAATTTTGGTAAAGCATATAGTTGAATGTAAGCTCATGGAGGA
AGTTTTACTTAATATTTTAAAAAAAAAAAGCAAAAACAAAATGGAAGAAG
GTTTATTCGTTATGTTGAAAAGGATTGTCAGTTAAAACTATTTACTATAT
GTAGAGCCATAGATCTGGGCATACCAAATATGAATTGAATGAGAGTAATA
TGTCAGACATCAGGCATTTTCAGCCCAAGATGGATGGCAGGATGGGTGTC
TGAATCTATGAGCGCGCCTGAGAGTTAATTGTGATTATGGGTGTCCATGT
TTTTTTCTTGTTGCAGAACTTAACAGGGAGTCCTGGAACTCCCTCGGAGT
ATTTTGGATAACCATGTGAAAGGCTCTAGAAGCATGAGCTTTTTATAATC
ATCTTGTAACATTTTATTCAACAAATTATTTTAAATAAGCTTGGTCCTAT
GAAATATGTTTTGTATTCCTACAAAAATGTGAAGATATTTGTAGACAACA
GTATTAACTCATAGGGACACATTCCTAGTGTAAAATGAACAAATTACGTT
GTATATAAGCGGTATTCTACTAAGCTGTCACCAATACAAGTGTTATTCTT
CTGCTAAATAGAGTTTTTTGTGTGCTCTGCTTTTACTGCTTGCCTCGTTA
CTAGGTGGGTGTCAAGGCTGACCTAGAGGAGTTTAATGGTTGAGCAAAAA
TGAGAGATATAGAACAATAATTAAAAGTTGTTTTATATATAAGCATAACC
TTGTTGGCTGTACTCTGTAGGACATAGTTTCACACCATATATGTATGTCC
TTATTACTACATTGTATGCTACAAGGTATATAAATTAATCTGTTATGTTA
AGTAATTGTGCTAAAAGCTTTATAAATTGCAGCTCGCAGAATGCAATATC
TTCCGATGAAAGAGGGATTGGTCTCGGCAGTAATGCAATCTTAGACAGAT
CAGCTACTTCAGGTTACACTGAGTGGTTCCTTTCAAAAGATTATCTTCAA
GTGGGTGATATGGTGCGTTCTAGAAAGCTATCAAACTCTTGCAAGCCTGA
GAACATGGATGTCCCGGAAGGGTCTATTGTGGGTTTGGAGCGTGACACTG
ATCGGAGGGGGTTTGTTTTAGTCAGGGTACATGCTATCCATGACCCTGTA
AGAGTTCATGCATCTACACTGGAGCGTGTGACATATGGTTTGGCCGCTGG
AGATTGGGTGCGCCTAAAGAACGTAGACAAGAAGCACTCACCGGTGGGCA
TCCTCCATTTCGTCCATCGTGATGGAGCTGTAGGTGTTGGTTTAATCGGG
GTTAATACTTTGTGGAAAGGTAGTTATTCGGACCTTGAGATGGCAGAAAC
CTATTGTGTTGGTCAGTTTGTAAGGGTGAAGTCAAATGTTTATAGCCCCC
GATTTGAATGGCCTCAAAAAAGAGGGGCCGAGTGGGTCACGGGGAGAATT
TGTCAAATTCTACCAAATGGGTGCTTAGTTGTAAAGTTTCCTGGTAGATT
GTCATTTGGAGATGAGAGCAGTAATTTTTTGGCTGATCCAGCTGAAGTAG
AAGTTGTTTCTTTTAAAAATTGTCCAGGCATGGTGAAAAAGTATCAGCAT
CTTGAGGATTTTCACTGGGCTGTGAGGCCACTACTTATTGCTTTGGGCCT
CTTCACTGCCATGAAGCTAGGGTTTATTGTAGGAAACAAAGTGGGAGGTT
CAAAAGTGAAGAAGGACCAGAAGCTCATATCGCAGGAAGACAGTCGTATG
CATATGGATGGAAAGAATGCCATATGGGTTCCAGCGAAGATGGATGGCCA
GAATGCGGGATGGATTCCTCCTAATGTCGCTAATATAATCTTCAGAGATG
GTGTGAGTACTGCTTCCACTTGATCCAGAAGTTAAACCCAAACTCAGTTA
CAGTCAGTTGCTCAAAGCAAGTCGCTGGACGTAAATAAAGCTATCTAGTT
TATTAATCATCTGACAAACTGCTTATGTTCCTAAGCTACACACTCTGCAG

Sequence Length:

8900

Sequence Checksum:

73bb3ad036c440334c77868af2df62be

View location in JBrowse:

DCARv2_Chr1:17205935..17214834-

Cds:

>DCAR_001540cds ATGGCTGGACAAGTAGCTTTCAATCAATCACCTGCTCCTTCTGAGGACTT TGAGATTGTTTATGGTGATTTTAAAGTAGCATCCCAAGCTCAGTGTAGTC CTCTAATTGATCCTTCAACTATAAAACTTAGACATAGACTCGGAAGAGGT CCATTTGGTGATGTTTGGTTAGCAACTCTTCATCAGACAGCTGAAGATTA CGAAGAGTATCATGAAGTGGCTGTGAAGATGTTACATCATGTTAAGGAAG ATAGCATTAGAACAGTATTAGATAAGCTGGCTGAGTTATTTTTCAAGAGT AGAGGACTAAAGGGTGTTTGTTGGATGTATGGCACTTCAATTATAAGTGG CAAGATATGTATAGTTATGAAATTCTATGAGGGATCCGTTGGTGACAAGA TGGCTCGCCTTAAAGGGGGGAAGCTCTCATTGCCTGATGTTCTGAGGCAT GGAATTGATCTGGCTCAGGGAATTAGGGAAATGCATTCGAAAGAGATTAT GGTCCTGAACCTTAAACCCTGCAATTTCCTTTTGAATGAAAATAACCAAT CAATTTTGGGGGATTTGGGAATTGCATATGTACTTATGGGGATTCCATTG CCGAGTTCAGATCTGACTCGTAGGCTTGGAACACCAAACTATATGGCTCC TGAACAATGGGAACCAGGTACAAGAGGTCCAATATCCTATGAGACAGACT CTTGGGGATTTGCTTGCAGCATTGTTGAGATGCTGACTGGTACACAGCCT TGGTGTGGTATGTCTATTGATAACATATACAAGACTGTAGTTGAAAAGCA AGAAAAGCCGTTCATACCTGAAGGTCTTCCTTCAGAGCTGGAGAATGTTA TCCTTGGCTGTTTTGAGTATGACTTCAGGAGCCGTCCATTAATGTCAGAT ATATTAAATGCTTTCAAAAGCTCGCAGAATGCAATATCTTCCGATGAAAG AGGGATTGGTCTCGGCAGTAATGCAATCTTAGACAGATCAGCTACTTCAG GTTACACTGAGTGGTTCCTTTCAAAAGATTATCTTCAAGTGGGTGATATG GTGCGTTCTAGAAAGCTATCAAACTCTTGCAAGCCTGAGAACATGGATGT CCCGGAAGGGTCTATTGTGGGTTTGGAGCGTGACACTGATCGGAGGGGGT TTGTTTTAGTCAGGGTACATGCTATCCATGACCCTGTAAGAGTTCATGCA TCTACACTGGAGCGTGTGACATATGGTTTGGCCGCTGGAGATTGGGTGCG CCTAAAGAACGTAGACAAGAAGCACTCACCGGTGGGCATCCTCCATTTCG TCCATCGTGATGGAGCTGTAGGTGTTGGTTTAATCGGGGTTAATACTTTG TGGAAAGGTAGTTATTCGGACCTTGAGATGGCAGAAACCTATTGTGTTGG TCAGTTTGTAAGGGTGAAGTCAAATGTTTATAGCCCCCGATTTGAATGGC CTCAAAAAAGAGGGGCCGAGTGGGTCACGGGGAGAATTTGTCAAATTCTA CCAAATGGGTGCTTAGTTGTAAAGTTTCCTGGTAGATTGTCATTTGGAGA TGAGAGCAGTAATTTTTTGGCTGATCCAGCTGAAGTAGAAGTTGTTTCTT TTAAAAATTGTCCAGGCATGGTGAAAAAGTATCAGCATCTTGAGGATTTT CACTGGGCTGTGAGGCCACTACTTATTGCTTTGGGCCTCTTCACTGCCAT GAAGCTAGGGTTTATTGTAGGAAACAAAGTGGGAGGTTCAAAAGTGAAGA AGGACCAGAAGCTCATATCGCAGGAAGACAGTCGTATGCATATGGATGGA AAGAATGCCATATGGGTTCCAGCGAAGATGGATGGCCAGAATGCGGGATG GATTCCTCCTAATGTCGCTAATATAATCTTCAGAGATGGTGTGAGTACTG CTTCCACTTGA

Pep:

>DCAR_001540pep MAGQVAFNQSPAPSEDFEIVYGDFKVASQAQCSPLIDPSTIKLRHRLGRG PFGDVWLATLHQTAEDYEEYHEVAVKMLHHVKEDSIRTVLDKLAELFFKS RGLKGVCWMYGTSIISGKICIVMKFYEGSVGDKMARLKGGKLSLPDVLRH GIDLAQGIREMHSKEIMVLNLKPCNFLLNENNQSILGDLGIAYVLMGIPL PSSDLTRRLGTPNYMAPEQWEPGTRGPISYETDSWGFACSIVEMLTGTQP WCGMSIDNIYKTVVEKQEKPFIPEGLPSELENVILGCFEYDFRSRPLMSD ILNAFKSSQNAISSDERGIGLGSNAILDRSATSGYTEWFLSKDYLQVGDM VRSRKLSNSCKPENMDVPEGSIVGLERDTDRRGFVLVRVHAIHDPVRVHA STLERVTYGLAAGDWVRLKNVDKKHSPVGILHFVHRDGAVGVGLIGVNTL WKGSYSDLEMAETYCVGQFVRVKSNVYSPRFEWPQKRGAEWVTGRICQIL PNGCLVVKFPGRLSFGDESSNFLADPAEVEVVSFKNCPGMVKKYQHLEDF HWAVRPLLIALGLFTAMKLGFIVGNKVGGSKVKKDQKLISQEDSRMHMDG KNAIWVPAKMDGQNAGWIPPNVANIIFRDGVSTAST*