Resource Type:
Gene
Organism:
Name:
LOC108214235
Identifier:
LOC108214235
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017386115.1, is a part of gene, LOC108214235. |
| The genetic_marker, MK016679 SSR0021, is located in gene, LOC108214235. |
| The mRNA, XM_017386114.1, is a part of gene, LOC108214235. |
| The mRNA, XM_017386113.1, is a part of gene, LOC108214235. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017386113.1 | XM_017386113.1 | mRNA | DCARv2_Chr3:38141945..38158434 |
| XM_017386114.1 | XM_017386114.1 | mRNA | DCARv2_Chr3:38149596..38158434 |
| XM_017386115.1 | XM_017386115.1 | mRNA | DCARv2_Chr3:38150412..38158434 |
Sequence:
TCATTTATTTATGCTTACAATAATACCACTACTCTCCTTCCTAATCTATC
TGTATCTCTTTCTCTCTCTCAATTAGTCCCCAATTTCACAACTAATCTAC
ACACACATGTATATTTTATCATAACTCTATCTTCATCGCAATGCCTCTCG
TGACCGGCGATCGTTACCTCGAGTCTCTCGTCAAATTCGTCGACAAACTC
GCCGGAAATCTAATCGACGGCACCGTAACTCTCAAACTGAATCCAGTAGG
TCTCCACTACGTTCAATCGAGACTCGAAGCTTTATCGGAGCTCGAATCGC
TTCTCCACGGAGCTCCGGTCGATTATCTCCGTGCTTATATCTCCGATTTA
GGTGATCACCGTGCCCTAGAACAACTCCGCCGGATTTTACGCCTGTTGAC
GTCGTTAAAAGTTGTGTCGGTGCTTCCGCCCAATATTAGGGATCCGACAA
GGTTGTCGTTGCTGCCGTTTGAGAGATTGAAGGTGTTGGAGCTTCGGGGA
TGTGATTTGACTACTTCAGCCGCACGGGGATTGTTGGAATTGAGGCATAC
TTTGGAGAAATTTGTGTGTCATAATTCCACTGTGAGTGTTTTTAATTGAA
TTCAAGTGTTCGAATTAGTTTTATGTATTATTATGAGTGTCATGTCCTCA
ACTCGTATGCTAATTACATCTAGTTTAATTTTCCCTCAAATGTTAGAGTT
GGTTTGAGGTCATTTCTTTGATTCTCCAGCAAGTAACTTTAAAACCCATG
CATGAATTTTTCGTTTCTTTCTCTGTAGAGGACGAAGCTGCAATTTAGGG
GTAAGCTTAAGTGCTCTTGAATCATATTGTTTTGTAATGTTAAGTTATGA
AATAAAATTGTTTTAATTAGAACAAAAAGTAACAGATATCTCTTTGGGGA
AGTAGAACTACAGTAATTTTCTCCAAAACTTTTAGAGTGTCTGGTTTTGG
GTTACTGAAAGTTCTGTTTCAGTTCTGATTTACAGGTTTTGGTTGGGTAA
TCTTGCAAATCTTATAAGGTTTTTTGCATCTGTGTATTTGGATACTTAAA
TGCAGGGCCATAGAAAATTGTTGATTTTGTTAGATAAGTGAGTGTTTTTC
ACCTATCCCCTTTACACAACAAAGCGTATTGTTCATCATGATAATTATAC
CTGGAAATTAGATACCAAGATATTAAGATACCCTAAACAAGTTGTGCCTC
CTTTTGCCATCTTTTAATTATTGTTTGGTAGTGCACTTCTAATGCCCAAT
GCCCCCCTTCTTTTTCTGTACTCAGGATGCTCTTCGGCATGTATTTGCAA
GCAGAATTGCTGAGATAAAAGATTCTCCCCAGTGGAATCGATTAAATTCT
GTTTCATGTGCTTGTAATGGATTGCTTCTTATGGATGAGTCTTTGCAACT
TCTTCCTGTTGTTGAAACCTTAGATTTAAGTAGAAACAAGTTTACAAGGG
TAGATAATCTGCGTAAGTGTATCAATTTGAAGCACCTAGATCTCGGGTTC
AATCACCTGAGAACAATTGCATCATTAAATGAGGTAACACATGTTTACCA
CTTGTTTGTGTTGCTTTATACTTATAAGCTTATTGCACTTGTATATTAAA
CATGCATACTATTTCTTTAAGAAGCATCCCTCTTTCTTGGGCTCCGTGAC
TTGTTGAGTTTGTATATACAAAGATGGAAACAATCATTTCTACGAGTTAT
TATGAAAATTTATTCCCTTGTTAATGATTGTTATATGTTGTATAATTCAA
AAATGATAAATGATATTGTTAATTGGATTCACTGCTTTATTTAATCTTTC
TCTATTCATATAATGAATAGAGGATATTCTGTAAGATAAAATGTTTAGGT
GTTCAAATTGTATCAAGAGAACAATAAACTAATATGTTAAACTAAATTGA
AATATAGAATCATGGTCAACAAACAAAAAAAATTAGCAATAGTATACATG
AAATAGTAAATCAATCATATATTATAATGTTTTTGTTTTCTAAACAAATT
TATACATGTTACTATATAAGATTAAATTTGTTTTCTATAAAATAAGTTCA
CAAAATCAATCATAATGACAATGATAATATTACGGAAGTCAGATCACCAA
CTTGTAAAACTGCATAAGGCAAGGTGGATCACCTGTCCTCAGTGTGTTGG
TAACTTCATCTCTGATTATACCGAACTACCAATCAAATAATTTTTTCCAA
CTCGTATTTTTATCAGTGCAATGATCATTGGTTAGTTTTTTTTTTACAAA
AATTGTTCTGCAAGTTATTTATTTCATTTTCAGTTGTATGTCTATATGCT
TGATAGCCAATCACACTCGTTTTTTTGCTTTTATAATTCCGGCTTCCTTT
TTTCTGTGAAACAGAAATTCACTGAATATGTGTGTGTTACAAGGGATTTT
CAAGGATTTGTAGAATCGGTAGGTCATAGTTATCATGACTAGACATTTGT
CTGAAATTCCCTGACTAATCAGTTTAACTTGTCGATGACGTCACTTACCT
ATACAACCTATGAACCTAACATGTAATAAATTATACTTAACAATATGGTC
AAACAAACACATTCCTTGAATGCATATATGAAATATATATACGAAACAAA
TAGCATTATGTTATATTGAATTAGTACATCACATTATGTAATGTCCAAAA
GAATCTATTAAAAGTTACAAGTCACGATGACTTGCACAATTTAGTACAAA
GCATGATAGCATACTAAAGATAGAAGTGCAATATCCTAGAATTCAAAGTA
ATGAAGGAGCTCTAAAATTTATGTCTTGCAAGGACACACTTTTTTTCTTT
TGGTTTCAATCTCAGTTAGATTAAGTATACCAGCAGTCATGAAGCGGTTA
ATCGACTAGGTTAAGTCCGGTTGTTTATCTGGACTGTCAAATGGACATAT
TTTGATATGCTGGCAAGCTTTTAGCTGATAATTCTTTGAGACATCCCGAC
ATAGTAACCCTTCTACAAGTAAATGGCCGGAGCAGAAAAATTAAAGAGTT
TGCTGTTGGTCAGAGGGGATCTATATTCTATAAAGTGATAGGATTGCAAG
AACTTGTTGCATTACGGCTTTTTTTAGGACGCTGGAAATGCTATGGGTTA
TAATAAAGTTTCAGTAATATAGGTGCTAGCTTTTGGCATGACGTGTCTAC
ATGGTTTGGATCCATATAAGAATGTGTAAGTGTGTATCTTTTGATTACTC
CAGATGCTTTTAGTCAAATTTCTGACGTAATTGTAGATGTGAGTTATTTA
ATCAAATTACTCGTCTATGAACATAAGCAAAATAGAGGGCGCGATCTTTG
AGCCGATGATCCTTGAGTGCTTGGAGACCACTCACCCAATTAATAAGCCT
GCTGTATTTTGCTGACCAGAGTAAGTGATTGACAAATGTGCTATTGACGG
AAGGTTATCTCCTTTCTACTTTGGGAGAACCTGAAGATCTAGTATCTTTC
TCCTAATACATTGCCAATGCTGTGTATTCTTTTTATGCGGTAGCTTTTGG
CATGACATAGCTACTTTAATTTCTATAAAAGATCCTAACTGGAATATAAT
AATTTAAATCATTTTCCAATTTATTATTATATATACAATAAGTGTGGGAC
AAGAGGAGATTGACCATCTCATGTCGCCTTGTGAATATGCCATATGAGGA
TCTATCTTTTTGTCGCTTTCTTGGTTGTAGTTGTCTAGATATGTTAAAAT
CTTAAACATCAATTGGACACTGTTATATATTAATTTGTGCAACACTATTC
ATCAACTATTTCTTTATTATATGATCTTTTAATACTTCTTTTATACTACG
GAATGTTAATGTTGCACAAATTTCGATTTTTCGGGAGGTGGTTCAATAAT
TTTAAGTGTCACATCCATCTATAAATTAAGCATATACTTTGGTTCATACT
TATGTGCACTCTTTCATCATGCATGTGTTGGACAAATTACACATATATTA
AGCATTAGGCTTACTATTAGACATGCTAGATATTTCTAGCTGCTTTGAGT
TGGCCAAACCTGGTGTAGTTTACCTTAAACTTGTTTTACTGTCTTTGCAG
CTTTCTTGTCGAGTTGTTAAACTTGTTCTTAGGAACAATGCTCTTACAAC
ATTGCGTGGGATTGAAAATTTGTTGTCACTCGAAGGGCTTGATCTCTCCT
ACAACATTCTCTCCAATTTTTCAGAGCTGGAGATTCTTTCTGGTCTCACG
CATTTGAAAAGCCTGTGGTTAGAAGGAAATCCATTGTGTTGTGCCAGATG
GTACCGTGCACAAGTATTTAGCTTTTTCCCTGGACCATATGAAGTAAGTT
GTGGAATATAAAAATTATTTCTGTACCGTTTTGGAAATGTTTGTGAATCT
TAAATACATGCAGAGATAATCAATCCAAATATTAAGCAGCTCTACATTTA
ATATTTTAATGTCCCCTTAAAATTTATGACATCTGTAGATGCAGCTGGAT
GATAAGAGAATGTCTAGAGAAGAGTTTTGGAAGCGACAAATTATCATTGC
CAGAAGGCACTCACGGCCTGCTAGTTTTGGGTTTTATTTTAAAGCAAAAG
ATAATGCTGGATTAGAGGTCCCTATCAATACAAAACCAGTAAGTTGATGC
TGAAGCATACTAATTTGTCCTGCTACAACACACACGCGCGCGCGCGCGCA
CACACAATGGTAGATCTCCCCCAACGCAATTTACAAAAATTCCACGAATC
CATTGGTGGATAAGTCCTTGACTAAAAAGATAGAAAGGGCTTTTTCATCA
GGCAGGTTTATATGTGTGTGTGTGTGTGTGTGTGTATCCCCTTTGTATCA
AGTATTCTATAGGTATTGATTCCGACTTTGTAGGAGTGTTTGTTTTTTTT
GAATTATTTTGAATTTTTTTTTTCTGCAGAAAAAGATTTCGCGTCTTGCG
AATATTGAAAGTGAAGAGCAGAGTCCATCTGTATGTTCTGATCTGGAGTC
AGTTGAATGTGAAAATGAAATCCCAGGTAAAGTGGATAATAGTCTGGATG
AGAAAGACGAAATAGTTGATCTGATAAATAGAATTGAGTTGATGAAAAGA
GAGCGATCCAGTCTCTGGTTGGAGGAGCTTAAAGAATGGATAAATCATGA
TCCAAAATCTTCTATTGACGGTGCTCAATATAGTGGCAATGTAGTTGATC
CTGATCAGATAAATTGTCCAGAAAGCAATTCAAGATATCAACAACTAGGC
AAGTCCTCAAAATATGTGGCCGACTCTGCTCATGTTTCTTCTATTGATAG
TAGTGTGTATGCTCTGGAGTGTGATCCTGGTTTTAGTGGCCGGCAGTATT
ATGATCCAATTAGTGATGTATCTACAACATTGTCCATGAGGCATGTTGAT
GTAGAGGGGATTCCTTTTGTTGAAGGAAGCAATTCTAGCCCGAGGCATAT
GCTATCGCCTTGTACAGGAGGTGCTCAGCCCGTTTCTTGTGTTGTCCAAG
AAAATGATGGGGTTACGATGAAAAGAACTGTCAGACCTTTGGCTGCTATT
GATGAAATTATGGAATCGCAATCATCAACAGCTTGCCTGAGTTCACCACC
TCATTATCAGGAGGATATATTGCATCGTCGACAAAACTTAGAGGAAGAGC
TTTTTCAGATATCAGCAGAGTCCTATTCAACTGCATCTACGGATAGCAAT
ACAAGTGATAGTGATGATGATTCTGCTGAATTTTGTACACCTCAAGTTGA
TGCATCATTTATAGATGAGCCTTTGGACAAAAGTGTCGATGAATTCGATT
TTACTGTAAGTTATTCTGGTGAACCTTCTTATAAGAAAAGGTACGATGTT
CCAAAACCCACACACAATGGAAATCATTTGCTTGACTCAGATGCAAGACA
AATTTCTGGTATCACTGAAGACAAGGAACCATACTCTTCTGAACTATTAC
AAGACATGTTTTGTAATGTACAACAGGAGGGGGACTGTCGGAAGAATAAA
AATTGTAAAAGGATTTCAAGGAGAAGAGTTGTCTCACTGGTAGACAGAGA
TGCTGCGGATGATGAGGGGGTGCCGTTGCCCGAAACTCTGGATGCTTCAA
GGGTTGATGTGGTAGACATAACAAAGAGACTAATCTCCCTTGACAGTGAT
ATACATACCTGTGAAAATGCAGGCTTAACATCACACTCTGAACCCAGCGG
GAATATTCTCTCTGAAACAAAATCAGGATATCTGGGATCAGATGATTTCA
TTGTGAATCATTTTAATTCAAATGTTGCTGATTCTTTAGTCCAAGAAACT
TGTAGACAGTATGTGCGCTGCAGTTCTTTTATTGGCACGAATGGTGATTG
CAAAGAATGGTAATGTTAGCTGTACTGTATATTGCCATTTTATTTAAAGA
AAAAAAAAATAGTCCAAACTAATAGGTATTATGATCTACTGACATATAAA
GATAGACAAGTAACGCAGATATGATTTACTCTCCAAAAAATATTTGTTCT
TTCAGTACTTCCATAGTTCCCAAGCTTAGAAATATCTTTTGTATCTTATG
ACTTATAATTCGATAGGTGTCCTTTCATAATCTCTCTGAGACTTAGTTTT
AGTACTTTTTAGCATTACTCTTGTCATGTTCTCAAGTCTTAGTTTAGACT
TTAGCTGGGCAAGTGCTGTGTTGCTTATTGTCATCTTCCTCACGGGTACC
AGCCAAATCTGTAACCTGTTGTATTACGAAGCAGGAACTAACTCTATGCC
TTCCAACAGTGGCGTCATCCGTTAGGTGGCAATCCTTTTGGTTTGCTCCC
CGTTCCCCTTTTGGTTTGCTCCCCGTTCTGTGTTATGAGCTTAGGATTGG
TGGTGGTTTATGGTCTTAACTTCAAAATTTCACATATCTATAGCTCACCT
AATCTCCTTTTTTCAACATTCAAATTAATTTTACTTTCCCCTTGTATAAG
CAAGTATAACGAACATACTTTTGGGAAAAAAGCCAGTATAGATTTACTAC
AGGTCTTGTAAGCAATATTTAACCTGTATATAGTAGTATTCTTTTGTAAA
ATGTCTTGCAGAGCTATGACAAACAGAAAATATCATAGGAAAAAAGCCAA
TTGAGAACACAGAGTGCCAAAACAAATCCACTCAGGCCTCCTGCGCAGGC
TTGCAGTTTTCCTAATTTATTCAGTATTATTTAGTCTTTCCCACATTCTG
GTCAGTGCGTAACAGGTTTGATGGGGTCAGACCTACTTTTTAAGTAATTG
CAGCTTTAATTGGTAACAGATAGTAACTTGAATGCTATAGATTAAGGTTT
CTACTTTCTCGGTTAATTTCTATGCTACTGAGCTTTTGTGATTATCTGGA
AAATGATGGGAGTTCAATACTACTAATTGTATGCGGGACTGTGTATTGTG
AATAACTGGATCCTATATCTCCTTGAGTTAGGTTTCAAGTCATATTGCTT
TATACCTTTTTTCTTGTCAGTTGAATTAGATTGAAGATTTTAATTATATA
CCTACCTGGAATACCTTCTTTCTTCTGTTCTTTCATATATGATTGGAGTA
TCTTCTTGATCGCTAATTATTAAACCCTATATGAAGCCTGTCTTACTATT
GTTCTTTACTCCTTACAGTGAACTAGTTGTATTGCGGAGTAGCGAACAAA
AGCTGTATATGCTACTCATCAGCAATGAATATGATGGGTCAGGTTAGATT
TGTTATGGTATGAATGTTTTACTTTTTTCTTGTGAAAAACTATGTCTCTG
TATGCCATCTTGCTTTTCTGAATATTGCTACCATACTGCATCTTAGCAGA
GACTACGTTGAGTTTAATTGGCTGCCATAAAATTGAGGATGTTAAGGAGG
TTTTAGTTGGTTTAGGACTTCATATAGTAAGGTAACTGAAATGGTGCGTC
TCTATTATAGCTGAGTGTAGCGAATCAGCAAGGTTTTCCACTGTTCTAAT
TGTGCATCATTTTTGTAATGGATGTGCTAGGGTATACATTGAGAAGAATG
GAACATATCTATTTCTTACCAGGAGCCTGGAAAAATCAAGGCAACTGTTC
TGCATATTGGATATCCTGGATCCATATAACACAAAGGACGGCTTAATCTT
AAGGAGGTGATCCATTAAGTGTGCTTTAAATTTTAGTTAAGCTTTTGAAT
ATTTTGCCACTTCTCTTGCAACTTAGAAATGTTATGTAATTCAATATTCT
CATTTATGAACGATTCACGATGACCAAGTGTCACTGTTACGGCGTTTATA
AACTCATAGGCTCACACATGTGTAGGATAAATACTCAACAATAAGTTATT
ACACTTTGTTTTGTCCTCCCCACCCTTTTATTCTGAATTGCAGAAACAAT
TGTGACATCAGATGAATGTTATTTATTTAAGAAAATGGCTACATTACTTT
ATGCCTTGCATTTGTGTTACTTTGACTGATGTTGGCGTGCTCAAGTCAAA
CCACACATCCCAGTGTATCTTTGTCAGGCAAAGCCTATAGGAAGTATTAG
CATATTAAGTACAAGTGCAGGGCAAGAATGTCTTTTAGTCATTCTATTCT
GTGTTAGCTATAAATAGACTTGTGTGCTGGTATTATGCATATTATGAAAT
ACAAAACTTCTCTTCCAAGTTTCTCTCTCTCTTCTCTAACTGATTTTCCC
TCTCTTTCTCTCTCTAAACTCTGTCTCTCTCTCCTGATCTGATCTCTCTC
TCTCTCATTTCTACATCTCTCTGCCCTAATTCATCTCTATCTAGCTATAA
TCTACTGTTCTGTTACTTGCTTTGCTGCTATTTCAGTTCATAAACTCAGA
AAACACCAAAAATATACAAAAACAGCTTTGTCATACATTGAAGGCATGAC
AAATTGGTATCAGAGCTCTCAAAATCGATCCAGCCACTGCTTCTATCATA
CTGTGCTACTCAAAACGACTGGAGCGGTTGTGGAATCACTGTAATCGCAT
AAGTAAATCTGTAGAATTGATCAAAACAATCCAGGTACTCTGTTCTGTGA
CTTCTCTCTTAGATCTGAGATTTCAGTTGATTGATTTGGAGTTTACTGTT
GAGATTTTATAGATTACAGTCAGTTTTGTTAGTATATACTGTTAGAGTAC
TTGTTTGTTGAGATTTGTGTGTTTTGGGAGATTGTGTTGCTGTTGGAGAA
GTAATTGAGACAATTCAGTGAAACTGAAGTTATCTGTGAAGCATGATGAA
GGACATGGTAGTTTATGAAGGTGTGGACACTGAATTTGATAAGGCTGTGT
TAGGACTCAGGCAACAGCTTAAAGATGATGAAGAAGCTCTAGAACAGAAG
ATTGTAAAGCTGGAGTCTAGTATTGCAGTGGCAAGACAACTGATGGAGAG
ATTCCTGAAAACAAAAGTTAATAAAGCTAAGAATCAAGCAACACTGGGTA
GCACAAGAAATGTGCAAGGTTTACAACATCTTAAGCTCACTTTCCCTAAG
TTCAGTGAAGGTGATGATGTGGAAGACTGGTTACAGGACTGTAATCAGTA
CTTTGAGGTATTTGGAGTCAATGAGAGAAAGAAAGTGACAGTTGCAGGAA
TGCATTTGGAAGGAACTGCCAGGAGTTGGTACCACATCTACTCCCTTCAT
AATTCCATTTGTGAGTGGAAAAACTTTGCTGAACAGTTTACTCAGAGATT
TGGAAAAGGCAAGCAAGAATGGCTGGTGGAAAGGTTCAAAAAACTAAAAC
AGACTAAGTCAATGGAGCAATACTACACTGAATTTGAAGGATTGGTGGGG
CAACTGAAAGAAAAGATACCCTCTCTGACAGAGGAGTATTTCTTAGAAAG
TTTCATTGGGGGAATGCAGGCTGAAGTGCAGCAAGTTCTCAGGATATTGA
CTCCTAAATCTAGAGAAGAAGCTTATAAGAAAGCTAAGTATTTAGAACAG
ACCAGAAGGGGTCAGCAAGGGAATAGTAGCCAACTAAAAACCTCAGCTAA
GGAGAGCCAGGCTGTGAGCCAGGCTGCAGCTCAAGGAAACCTAGAGGTAC
TTGAAGCAAGTACAGGGCAAGACACAGAAATAAATAAGGATGAGGTGGCT
ACCACAGTAGAAACAATCACTCCTGAGGAGGGACAGACTCAGAAGCAACA
GATAGAAGTGTCTGTACATGCCATTGAGGGCCTTAAAGGGAGTCAAACAA
TCACTCTGACTGGGTATAAGAATAAGAAGCAGTTCTCTATTCTGGTAGAT
GGTGGCAGCACCCATAGTTTTTTAGATGAAAAGACTGCTGCACAACTAAA
ATGTGAGCTGGTTAAAACTAAACCTCTGAAAGTAATGGTTGCCAATGGGA
ATCAGCTGGTTAGTCATTATGAATGTCAAGGATTTTCTTGGAATATTGGC
AAATACAGGTTTAATACCCCTGTGAAAACCTTGCCAATGGGAAGCTATGA
CCTGGTGTTAGGGGTAGATTGGCTGGGATCTCTAGGTCCTGTGACATTTG
ATTTCAAGAAACTAGAGATGAGATTTCAGAAAGGAGAAGAAATGATTGTG
CTGCAAGGAAACCAAGGGTCTGATAAACCCAGGCTGCACCAAATGACTGC
TGACCAGTTTGTGAGGAGTTGTCAGAGGCAAGAACATGGACTCTTGTTTA
TTCTGGATGTGGTTCACCAGCCAGCAGGATCCCTACTCTCTCTTCAGTCA
GATGATGGGAACAACAACTCAGAGGGGAATAAGAAGCAGCTCCACAATTT
ATTGGAGGAGTACAGTGACATCTTTAAAGCCCCTGAAGGGTTGCCTCCTG
AGAGACAAATAGAGCATTCAATTGACTTAAAAGAAGGCTCACAACCTTTT
TCTATAAGGCCTTATAGGAACTCTTATAACCAGAAAAATGAGATTGAAAA
ACTGGTGGCTGAAATGCTAGAATCTGGTATAATCAGACCTAGTAGCTCAC
CTTTTGCATCTCCTATATTACTGGTAAAGAAGAAGGATGGCAGCTGGAGA
TTCTGCATTGACTACAGGAAGCTCAATTCAATGACTATAAAGAACAAGTT
TCCAATTCCACTAATTGAAGAGTTGCTAGATGAGCTTCATGGAGCTAAGT
ACTTCACCAAGCTAGATTTAAGAGCTGGATACCACCAAGTCAGAATGAAA
GAAAGGGATGTAGAGAAGACAGCATTCAGAACTCATTTGGGGCATTATGA
ATTCACTGTGATGCCCTTTGGCCTCACCAATGCCCCTGCCACCTTTCAGA
GCTTAATGAATGAAGTTTTCAGGCCTTACTTGAGGAGTTTTACTCTGGTC
TTCTTTGATGATATCTTGGTCTACTCTAAGACCAAGGAAGATCATTTGGT
ACACTTAAAGAAGGTCTTCCAGTTGATGAGGCAAAACACTCTATTTGCTA
AGCAATCTAAATGTGACTTCATGACTACTAAAGTAGCTTACTTAGGACAT
GTCATTTCACAACAAGGGGTAGCTGTGGATCAAGCTAAGGTTGCTGACAT
GGTCTCCTGGCCTCTGCCTCAGAACTTAAAAGCATTAAGAGGATTTTTGG
GCCTGACTGGCTACTACAGGAAATTTGTGCAGCACTATGGAACTATAGCC
AGGCCTCTGACAGATTTATTGCAGAAGGATAGCTTTCATTGGAGTGAAGA
AGCTACTAAAGCATTTCAGGCTCTCAAGAATGCCATGGCTAGTACTCCTG
TATTGAGGTTACCAGATTTCAGTAAAGAATTCACCATTGAATCTGATGCT
TGTAATACTGGCATAGGTGCTGTATTGACTCAAGAGGGCCAACCACTAGC
TTATTTCAGCAAGGCATTGGGGATAAAAGGACAAGCAATGTCTACCTATG
AAAAGGAATTGATGGCCTTAGTAGCAGCAGTGAAGAAGTGGTCTTCCTAC
CTAATGGACAAGCATTTTACTATTAAGACTGATCACTGGTCTCTAAAGTA
CTTGACTGATCAAAAGATCAGTAATCTGTTGCAGCAGAAATGGATCAGCA
AGTTATTAGGCTATGACTACACTATTGTGTACAGGAAGGGAAAGGAGAAC
ACTGTAGCTGATGCATTGTCCAGAAGATTTGAGGATGAGTCAAGTGGAGG
TGTTGATAACCATGAGGACATGGCTGCTGTTAAGGGGGAAGGATTGTCAG
GCAAAGCCTATAGGAAGTATTAGCATATTAAGTACAAGTGCAGGGCAAGA
ATGTCTTTTAGTCATTCTATTCTGTGTTAGCTATAAATAGACTTGTGTGC
TGGTATTATGCATATTATGAAATACAAAACTTCTCTTCCAAGTTTCTCTC
TCTCTTCTCTAACTGATTTTCCCTCTCTTTCTCTCTCTAAACTCTGTCTC
TCTCTCCTGATCTGATCTCTCTCTCTCTCATTTCTACATCTCTCTGCCCT
AATTCATCTCTATCTAGCTATAATCTACTGTTCTGTTACTTGCTTTGCTG
CTATTTCAGTTCATAAACTCAGAAAACACCAAAAATATACAAAAACAGCT
TTGTCATACATTGAAGGCATGACAATCTTAAAGCAGGGTTTGGGGATGAT
AAGGTTATATAGACTCACCTGTACTCTTAAGAGTACAGAGGTGGTCTCTG
TAAAGATCCCTGACTGTCAACATGTTATATGATTCTGGTAATTGATTTCT
TTAGCTGGTGTAGTTGCTTGGAAAATATATAGGACTTGATTTTTCTGTTT
AATGTCATTTTAGCTAGTTATATGTTGTATTCTGCTCTGATGCTATATTA
CTGTTTTGTAATATGGCAGCTTGGAGCAGGTTCAAGTAGATTTAATTTCC
AGGAATTTTCTTGGAGGCTCCAATACGAGCATCTTTCAGTTCTCGATGGT
TCTCCACTGGCGATGTACTTTTACAGGTAAGTGAATTTCGAAGTCTGCCT
TAATTTTTTTTTTCGATACTATCACCTTGACATGTGGCCAAAACAATAGA
TAGTCACTAATGGTAGATAGGTGAATGAAATTATTGTTGAAAGATTTGTG
AGTTTAAGCATCACAATGAGCCTGAAGTTAATGATTAATATTATTAGTGT
TTTTTACATATCAGGATAATTATATAAATAGGAAGTGGATTCTATTATCC
AAAGGTCTTATTGGCTGTGCCGAAACTGAATCAGTTGATTTCATTGGATG
TTTGTAGGATAGAAGAAGGCAAGTGAAGGCTGCGTTAGTTAAATAAAATA
AAAATTTAGCCGATTTGAATTTATACTGTAGGATATGAAGTGCTTTCATG
TAATGTTCATCATTACTTATATCCATCCTGAAAATAGCATACATCTTAGT
TCTCCTTGCTTAAGAATGACAGTTTCATACTTTTGAGCAGTACATTAAAA
TTGTCTATTGTGCCGGATGAATTTTTAAGATCTCTGTTTTGAGAGGCGAT
TTCTTCTAATCATTGTATATATGTTGCAGTCAGCATTCAAACATATTTTC
AAAGGAGGTGCTACTTCAGTCAAAATGAACTTAAACATGCTATCTGTAAT
ATAAATTTGTTTTCCTCGAGAACTGTGTTATTCATGTTTCCAGTTAGCAG
TATTAAATATCTCCATGTTATGCAGAGGACTCGTGGCTCTCAAGATCTCT
TTTCGTCCTGGAAAGACATTTGCTTCTTTGCATTGAAGACTTTTTGCAGT
TCGGATCTTTAACTGAGATTTCGCCTTGCTCATCCTACTTCTCGTTTGAT
TCATGCTGCTCCATTGTTGATGTGCAGGAGTTGGTATGTATTCTTGGGCT
TATTTAAATCTTGAGCATTCTACCTATCATCTGTTTATATGACTATATAA
AGCTTTATCTGTTCCGATGGTGCATTATCTGCATTATATTTTTGCAAGTC
AAAATATACTTGTAGGTATCTTCTTCATTTTTTAACAAGAAAGGGTAGGG
AGACCAACCCCCTATATTGATAGAAACACTCCTCACTTGGAGAAAATTTC
TCCTCCGGCAGGAGAAAATATATTAGGGAAATTACATTAAAGGGACCCTT
CAAAACTCTCGATGAAATACAGTGGAACATCAGAATATTTAACAAATATA
CGAAAAGTCACGATATATTTCACCTCAAGCTAGGGGAGGAATCATTAGCA
GTGAATTGATATCAGTCGATATATTGTTAGATAATTGGAGATCCAGGAAA
GATGAGAGCATCAAAAGCCCTAAAGGTCATGCTACATATAACGAATACAA
ATTCTCAATGGTACCCTTCTGCTTTCGTCTTTTTTAAGTGGTGACATTTT
GCATTTCGACTTATGAGTGGTCCCCTTTATTCTAATTTTCATATATAAAG
AGTAACACTTCTGGAAATTTAAATTTGTTCAAATATTTTGATGATTATGT
TTTTAAATGCAGTAGATTGTTACAGGTGTTGGAAGCACGAAAGGAACTAA
ATTTAAAATGGCTAATCAAGTCATTTACTTAAATTTTAACGTTTATTTGA
CGGAATGGAATGGCTAATTAACACTTAGTTAACGGAATGGTTAACTAACA
TTTAGCTAATGGAATGGCATAAATCAAGTCATTTACTTAAATTTTAACGT
TTATTTAACGGAATGGAATGGCTAATTAACACTTAGTTAACGGAATGGTT
AACTAACATTTAGCTAATGGAATGCATCATATACGTGATACTTAAAATAC
AAGAAGTACCACTCATAAGTCGGAAATAAAAGACGCCACTTGGGAAAGTC
AATATAGATGGGTAACATTGAGAATATCTCATTAACTAGAAGGCAAAGAA
AAGAAATCCAGTCCGTCCTCGAATCAACAAGATACCAATCTTCAAGCTGT
GCCTCAAATCAACAAGCTACCAAGCTCTAAGCCGTGCTGAACATCAAATC
ATATCATGAATCGAAGAAATGATTGCATAGAAAGTCTGAAAATAGGGTAA
AATTATAAATTGCAGTAAACAGATCACAAAATCACATATATGTATGTTGT
ATAAAGGCCTCTGGTCAGTGGAGAAGACATAAAAACCACATCATAAATCG
AAGAAAACTGAACCAAAGAAACTGCGGGTAAAGTTATAGATTGAAGGACT
AAACAGATTACATAATCTTATATATGTATATTATATTAAGGCCTCTGGTT
AGTAGATAAGCCACCGGCGGAGGAGAAGACACGGAATTTGGGTTTCTTCT
TTTATGTGGTGTTTACAATTTCCTCTGTTCTCATATTTATCTCTTTGTAT
CTACTGAACTGGGAATAAAATTAATTATAAAAATTAAATATTTTTGAATC
TGTGTTATTGGATATATAGCACAGCACAAAGATGGGCCACTTTCCCAATT
AGTTAGTTGGATGCTTTTCAAAGCTGGTACAAAGATATCAATTAGTGAGA
GAATTTTAAAATTAGTGATTACTGGAAGTTGGGTATGTACTTGGGGAGAA
GATATATGTTTCTTTTTGCAACCAATCAGTCATGGGTTCGACTATCTTAT
TTGAAATGCTAGGGGCCATTTTCTGGAAACCCAAAACAGCCTATTTACTG
GGTAGAGGTAGGCTTGCTACATCCTTTCCTACCCACACCCTGCTCGAAGA
GTGATATAAGTGGGTGCGTTCTTTTTCCTTCTAGGTATGGTTGTTGACAT
CCTTCACCATCTTCAAACTAAATACATTTTTCAATTCTCAATATCTATTA
TGTATCTCGCTATACTACTACTGTAAATGTTCCTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNGCGGCTCTCTTCTATTGTGTATCTGCTCTATT
ATTTCAAAATAATTCCAAACCTCGCTATACTACCACTGTAAATTTTCCTC
CCCCCTCACTTATGACTTGTTTATGGCTTTTTGTAGCCCTTATCCCGTGT
CATGCTCATTCGCTCTCCCTCCCAGCCTCCCAGCCTCCCCTCTCTCGATG
ACCTGTTTATGGCTTTTTAAAGTCCTCACTGTTGCTTGCTTCATGCTCTA
TACTTATTGTAATGACCTGAATACCTGATTGATTCCTTTTGAAGTTAAAA
AGCTGAGTGGCTTATATTTTAAACTATTACTACCATCATGCATTCTCAAA
CTCGCCTTCTTGTGCAGCAAAAGTCTCACTTAATGTTATTTTGTTTTGCA
CTAGATCAAAATTTCTTATGATATCACTTGGCAAAAATATGAATTCTGAT
ATAGATGATGATTATCAATCTCATTTTTCAGGTCATAGAAAGCAGTGAGA
GTTTGTGCTTAACGTTGGCTGTTAAAAAGGTCATGTCAAAGCTCTGCCTT
GACAAAACAACTAATGAAGTGGGGACCATACACTCTCCAGCAGTTCCCCT
GACATGGAAGCTCAGATGGTTCTCTGAAGAAAGTCTTTTCAAGTTTTTGT
CATTATTTAAGGCCCTTCATGATTCAGTAACATCGGCTCCTTTAGTTGTA
GTACATAAAATGTGAATTCCTTTTGTGTGTTTCATATTTAGTTATGTACA
AATGGTTGTTATTATCTGTATATCGGTTCTTGTTAGGTCAGTAGTTCTTT
CTTATTTTTTCATTCTTTTATATCTTGTAGGATATTCAAACACTGTGAAT
AGTTTTGAGCTACATCTTCCCCATTGTTCCCTAAATCTA
Sequence Length:
16489
Sequence Checksum:
8ca2111b63a8920ac4e114dc183fa4fe
View location in JBrowse:
Gene:
LOC108214235
Gene Biotype:
protein_coding
Gbkey:
Gene