Resource Type:
Gene
Organism:
Name:
LOC108214272
Identifier:
LOC108214272
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017386193.1, is a part of gene, LOC108214272. |
| The genetic_marker, MK017681 3_39034203, is located in gene, LOC108214272. |
| The genetic_marker, MK008682 85036.51580, is located in gene, LOC108214272. |
| The genetic_marker, MK017680 3_39036058, is located in gene, LOC108214272. |
| The genetic_marker, MK009528 3_39036067, is located in gene, LOC108214272. |
| The genetic_marker, MK009529 3_39036087, is located in gene, LOC108214272. |
| The genetic_marker, MK017674 3_39042083, is located in gene, LOC108214272. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017386193.1 | XM_017386193.1 | mRNA | DCARv2_Chr3:39032595..39047903 |
Sequence:
TTACTTCTCTCCCCTCCCCTGCACTCTCTCCCCCGCAATCTCTCTCTATG
CATTTCTTACTTCTCTCTTCTATATCCCCGCTCCCCCAATCTCTCTCTGC
TATTATCTCCCTCGTGCCCTGTCGTTTCCGCTATCATGTCCTCTAGTCAT
TTTTCACCTTCACTCATCGCTATTAACATTGCAATTGCCGTCATCGGTCA
CGCAAACCCCGCCCCATCTCTCTCATCGCATCTGCCTACAATAATCATAC
GGTGCAACTGTTTCTACCACTGCTCGCTTGAGTGTTCGTGTTTTGGTTTT
CGTTGATATCGTCTAAGGTGTTCATCTTTAGACTCATGCCTCATGCCGTC
TTGCATCATGATTGTATTGAAAAATTTACGCCTTGTTTGTTTTGAATAAG
ATTGATAGTTTGATTTTAAAATTGAAATTGACTCCTAAGTTGACTCTTAT
GGGAGTCTTTATTTTATCTTTATTAGGTTGCATGGGATTGTTTACGAGAT
TAACTTGGAAATGAGTATTATTATATTATTTTGTTGTTGTTATTTTTGTG
ATATTAATATTGGCCCGGATAGGATTATTTTCACCATTTGCAACACTTGT
AATTTATTATGCAATTAAATATAATTTTCAACCTATTCTTTTGCATATAT
GGTTGCTAGCAGTTGAGATATGATTGCAAATACGATCTTCTATATATTCG
CAAACTTTTTGAAAAATGATATTTTCATAATTTTTAAAAAAAATTATGTA
TATATTTTTAGATTTAGATATTTATGAAAAAATCCCAAACATATGTTATC
ACATGTTAGATTTAAAAAACAATATTATTGAATTATGCTTAGATGAATAT
TTAGATGGCGCAAATAATAATTGCCGTGATATTTGAGTGGAAACGATGAA
TGTGTCAGTCGGGAAAAGAAAAGAAAAAGTGAGGAGAAAAGTCAGTGTGG
ATTCCATTTGGGCGGCCTTGTCTTTCTATGTTTCCACCTTTGTTCATTGT
CATCCAGGCTCCATTGTAGATCATACATCAGAATTCCCCAATCTCATCAT
CACATTCATTTTGCTTCAAGATCGATCGCTGCTTTTCTCTGTGTTTATGA
CTTTTTTTCTTTATCTTCATGGCTGAAACTCGCCGCTTTGGACTTGCTCC
TCAATTAGGTTCCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCCCT
CCCCCCCTCTCTCTCTGATATGCGAGTGTAGTTTCCTAATTTGTTGAATA
GGTGTTGATGTTACTAGCACAAACTGTTCATTGCAATTAATTTGTTATAT
GCATGCAATTATGTCTAGTAAGCAAAAAATCAACCCCAGTCAATTTTACC
CAGCTTCTACTCTAGCTTTTCTATGCTCATTTATCACCCAATTAACACAA
TATATTTATTCATCTTTATGCAATTTAACCAATAACAACGGCTGTTTAAG
ATATGTTGAAATAACAAAGATTGATTTTCATAAAACATTCTTCAATACTA
TGTTGGTTAGATGATAAGTATTTCAATGACACATATATTCCAACAATGAT
TTTGGCTATTATAGGAATGAGTTCTAAACGATAAAACTGTTTTTTTTTTG
TTTTATTTTACAAGTAGAATTGACCTAAGTTTGACTTACAATGAAACTAG
TAGCCCAATATAATGGTAAGCTGTATACACTGAAAATGGTAAAATCTTAA
ATGAAAATATCAGCAAGATAACTGGTAAGCTGTATATATCTTCAAAATAC
TGAATATAAGCTTAAGTCAAGTATTAAGTACACTAACAACACGTCATACC
ATAAGCTTAAGTCCAACTACGAAGAGCAAGTCCAACAGTGTCATAGATTT
AGGACATTGTTTAGTATTTCAATTCGAACAATATTTCTTATTTTTATTCA
CTATTATTAAAATAAAAATATATTTGATGTAGTAGATGTTAAATGGTGGG
AGTTGGGACCAAAAGTATAGCAAGTGGAAACTAAATGGTACAGAAGGAGG
GAAGTAAATTTTTTAGGGTATTTATCAACTTTTTGTAAGTTATTTTTTGC
AATTTTACCATCTTGTGAAAATAATGTGAATATACCTTTCAACCAAATAT
GCAACTAAATGCAACTTTCTTATTTTTAGAATTCCATAATCTTCAGATAG
AAATCTCTGCTCTTGTGCTTTTAGCCTTTCAGGTAACAATGACCCGATAA
GGTCATGACTCTTGACAATCCACCCATCCACATACGCACATACATTCCTG
GACAGTGAAGCATTCTTCCCGGACACTGAAGCCTCGACATATATCAAAAC
ATTGAAATTACAATAATTGATACCAAAATCTGTAGCTACGGCTTACTAGA
TTGAGCAAGGGTGGAAAATGTTCTAGAATTAGAGGACCACATGCATGGTA
TATAAACGAAAATAGCCCGTGGATATGGTGGGGGTGGTTATGGAGGCTGC
GGCTATGGTAGTTGAGGTGGCTATGGTTGTGTTGCTGGGATAGGGTAATT
AGGCTGTTTGATTGCTGATACTAGGCCCAGGCCCTGCAAGGGCACTTCAT
CCTATCTGAAGTTGTTTTTAATAGTGTTTTTTTAAAGTTGCATATATGGT
TGCAAATATGGTTGCTAGCAGTTGCATATTCAGTTGCAAAGTTACAAACC
GTATTTTTGCAAAAATAGTTTCAGAAAATGGTATTTTTGCAATTTTTATT
TGGAAAATTGTATTTTTGCAATTTTTGAAAAAAGTTACAGTATTTTTGGA
AAAATCTTTCTAGCCTTGGGTATTTGTGAAAACCCCCAATTTTTTATCCC
TAAAAATGATAAAAGAATGACTAGTGTTTAACTAAAGATAGGGAATGAGA
GGGATGTCCTAGTGATATAGGAAGTCAGTAGACAATGCTAGAGCCATTTT
ATCCTACATTTAGGGAAGTTGTTGGACTTGCTTCATACATTAACAAGTCA
TTATATTTGGAGAGCTTGTGGATCCCTGAAGTTAGTTAAACTTGGCCCAG
TGGACTTGGGCTGTTAACTGTGTAGTATAAAAATAGATTTTTTCAAACAG
CTATATTTTATTATCATACCATTCAGTTATAAATGTTTCAAATATGTTAA
GATCTCAATTTCTTTTTTGTTTTCATGTGAAATATATATCATAGCGTGAA
ATCACCACATATCTAGAAATTTATATGAATGTGGTAAAAAGGGAATTCTG
TAGGTATCTAAAGGAATTGAAGTGGCAAATGATATGAGTATCATACTAGA
TGCAGTGTGAAAGAAATAAAAAACTGTTGAACAAAGCTGAAGTATTGGAG
AGAGATATTATAACCCTATGTGTTAGTGTTACAAGGGCAAGAACTGTGAG
ATGGATGGATGGATATCATTGCATGACTATGGATTACAAGCTGCAAATAT
AATTTGTTGGTACACTGAATATATATGATGAATGTAGACAGTATGCTGAT
TATGTTTATAAACTTTGTAGGTTTGATGTACTCATATAGTTGTTTCACTG
CAGATATTGAGCAAATACTCTTGGAAGCTCAAAATCGATGGCTACGGCCT
GCTGAAATATGTGAAATACTTAGAAATTATAACAAGTTTCGAATTTCTCC
TGAGCCAGCGCATAGGCCTCCAAGTATGACAATAAGTGCATCAAACAAGG
CATCTGTTAACTATTATTTGACTAGCTTAATCTTGCGGATGATTGATTTA
CCATCCTGCTTCCTGTGCAACATGCTTGTTTGCTATGTAATGTTTTCCTG
TTTCGTGTTGTGTATTGATCATTTTCTGCTCACACAAACATGCACGCCTA
CACTTGCTCTCATAAAAATTTGCGAATAGAAGCTGTGAAAGATGCAGAGG
TTAAAAATAAATGGTCAAGTTTTCATGTTATAAATTCCCTGTTTAGAGTA
GTGTGTGTTCTTCTCTATGCAATATGTATCTGTCCACACACATCTATACA
TAAATGGTATAGATTATAATTTATGTTAAAGATTTATCAAGGATTCTTAG
GCCTTTACTGTTAGCAATCAGATTTAAGTGTCCTGACTTAGTTGAGTGAA
TTCCATAACTAATGTGCTGTTCTTTTCATTCTAGACTCTAGTTAAGACTT
AAGAAAACCAATATAATGATAAATGACACTAAATAACAGCACTTATGTAT
TCTTCACGTATAGTGTGTATTTGTTTGTCTAGTATTGTTTCTTGGAAACA
CACTCTTTATTGAATTTGTACTCTTTTACCAAGTTAGAACTCATGTTAAA
TAGCTTCACTAGCTGAATGGTAAATCTGTGCTTTTTTCTGTGATGTGGAT
AAATAACTTCCTTATTATGTGAATCTGTGGGAAATGGTTGAGTTGGCTCG
TGGATGACATATAGTTAGCTGTCAATTTTTCTTAGTGTAGTTTGAATAGT
GTGTATTCCGCTTTCCCACAAACATGTATAGCAGCTTGATCTCTCTTAAT
TACTTTGCTTCCCTTCTTTTATCACTATAAGTAAGCACTGTAACATCTCT
CTCTCTCTGTGTGTGTGTGTGTGAATTTTCAAGTTAAAGATGCTCTAATA
GTTGATGATTTACGATTATACAGCGGCTTGACATGGAATTCTTTTTTCAG
ATGGTTCACTATTTCTTTTTGACCGTAAAGTTTTAAGGTATTTTAGAAAA
GATGGACATAATTGGAGGAAAAAAAGGGATGGAAAGACAATTAAGGAAGC
TCATGAAAGACTCAAGGTTGGTATTAAGAATTGTCCTGTTTGGATATGAG
GATTAGTGGAATATTTTTTAATAAGTACTTTACCAACTCGTTCCTCCTGC
TTCCTATGCTAATAAATTTGCAAAAACTAGTAGGATTGTTTAAAATACTC
TACATACTATGGGATCCCCCGCCCCCTCTTCTTTTAGTTTCCGCATTCTC
CCTTCACTGCTTAGAAAGGAAAGAAACATATGTTAATAAGTTGCAATGGC
TGTAAAAGTAAGCATTTCAAGAATGCATAAACACTTGCAATTGACTTGAT
CAGTTTATTTTCTGTTATTATCATTTTCTGCTAAACAGTTTTTGTTCATG
CATCAATCTTAAGTATGTAGATTTAACATTTTTTCAGGCTGGAAGTGTTG
ATGTTTTGCATTGTTACTATGCTCATGGAGAAAATAATGAAAATTTTCAA
AGGCGCAGCTACTGGTTGCTTGAAGAGTGAGTATCTAAAATATATGTTAC
TTCAGATCATTTTCTAAATTATAGTACTCTCTCCATGCACACAGACTTGT
GGACATAAATATACGCAATATAACAATGGAAATTGCCCAGGGGGAAGGGG
TGGCGGGAGGATTGCTCAGACATTGATTCGACTTTTAAATCTGTTATTTT
GTGCATTACTTGCATAGACAATGATATATACAATGATTGATGACTTTGGA
GAACTACAGGTTAAGGTTGCAGAATTATAACATCAAATGCTTTTGAGATT
CATGTTCTAAGAACACCAATGCATCTTAAACACTGCAGGGTGTACTTTTG
AGTTGATATATATAAGTCTTTGACAAATGAGGCTAAATCCGTATTCTCCT
GTGATGATTTGTGAGACATTTTCTGATTTCATCAGCTCAAGCTTGCACTT
GAGCTTCACAAGTTGAGTCGAGTTTGAGCTGTTTCATTTATTTCAAAATT
ATTACTATGCTATATAGATCAGGCACAAACCAGACTAATTTATGAGTCTA
AATTCTATAAGCAGGTGCTGGCGGAGTTATGTGATGAAAGTAAAAAAATT
AGAAAGGAGGTAGGTTCATTGAGGTCGAGCTTGAACAACATATAAGTCGG
AGAGTATCTGAACTCGGCTGCCTGCTTCGAAACTCTATGACACACTGAAC
TTAGCAGCCTTAAAGGCCAAAACTTTATTTGTTATGATAATTAATAATAA
TTATAGTGGAAAAAGTAAAAAAAAAAACTTTAAAGGCTCGAGTTTGAATT
AATGTGTGTGGTTAGTAAATATATGAAACACTTTACGTCCTTCAGATATT
GATGCATGAATTTTTTAGCTACTTGATAACTAAAGCCCTTAGAAGTGCAC
TAAGTTTTTGTGCATGCCGTATATTTTCTGAAGCATTTTACAATTTCTGA
CTTTCCTGTATTCTTATTAACTGCCTCAGGGAGCTCTCCAACATAGTTCT
TGTCCACTACCGGGAAGTAAAGGTTAGTATTTATCCTTTCAGTCTCTACT
CTCTAGTCATTTTTCCTTTTACAATTTAATTAAGAACAACCTTCAGTTAA
ATTTAGATGTCACAAAAATGGTTGTCACTGCACTCGACTAGTCAACATCG
AGCAGTCGAGATCTCCTAAATGACTAATTTAGTCAACTTGCTATTTCGAG
GAATTTGGCCGACTTGTCGACGTAGTGACTAGTCGGATTTCCTTGCTGTT
TTGGACCATTGACTGGTGCGTCGAACAAAACACAATATAAATCCTATCGT
TTTTTGTTTGAATTGCTTAATCTCTTAGCGTAGAAACCTTATTGTTGAAA
GGGATGACTAAATCTGTTGTGGCTTGTCAAGCCTCGTCGTCTTTTCAATC
TCTGTTCAATGCCGATTTACCTTGAGTTCTATTTCTTCAGAAAAATGTGA
AAACATATAAATAAACAAAAAATGTCAGTTTGTGTGTATTTTACCTTTAG
TTTTTATGTACTCCTGCAATGTGTTTACATATGCATATATACTCCGTGCG
GGTGCGTGTGTGTGTGGCAGTGCGGGTATGCTTGTATTAACATGTACATT
CATATTGTTTTATATGCATGTTACTCCAATTTGTAAGTGTCTCAATATTA
TGTTGACCATTGACTAATTACTGTGGTAGTCATGATTTCTCTTCCTTGTT
TATTTTATCAAGACTAGATTTACTTGCTTCTTAGTATAATACTATATATA
TACATATTGTACAATGTATAAATTATTATTAATATTTATAATAGTATATA
TATACATATTGTACAATGTATAAATTATTATTAATATTTATAATAGTATA
TATATACATATTGTACAATGTATAAATTATTATTAATATTTATAATAGTA
TATATATACATATTGTACAATGTATAAATTATTATTAATATTTATATATT
GACTATCTGAAGACTAGAATACGACTTACCGGCTAGTCGACTAGCTGAGC
CACACCTCCATCTACTCGACTCCACTTACCACCTAGACAATCCCCGTCAC
AAATAATCTGAACTCGTTGATTTATTGCATACCTGGGTTAATTTTTGTAA
AGATTCAAGATAACCTATTGGTTTACCTGTATGTCGTTTGGGCAAAAAGT
GTAGTATAACATATATTACTTCATTAAATGATTGATTAGATTCAGCTCAG
TGATATATTATATAAATATCATCTTTCAGTATTATAATATCAAGTGATAT
TCTTATTGTAAACACCTTAAATTCGATATGGAATTATTGGTGATACACAC
ACACACACACACATATATATATAGAGAGAGTCTTATTGTACTACAGATCT
CCTTATTCTACAAACTAAAAACCCAGCTGCAATATCACTAAAATCTAAAC
ACAAAATCACCAAATCTTTCAACAACCCCGTTTCCACCTCCATCTCAAGC
TCCACCTCCACTTCTGGCAACTTCGGTCCGCCGCCCCCTCCGCCTTCTGC
ACGTCCGGCGTCCCTCCAATGCGCCTCCTCCACGTCTGTTGTCCCTCCAG
TCCGCCTCCACCGTCTATACCACCAACGTCTACCCCACCTCCACCATCCC
CTCCACCTTCTCCTCCTTCACCACTCCATGTGCGTCACCTCCTCCACCTT
CGTCGTCTTTATCTCCGCCATCTCCGCTGCTTTACTGCCAATATAAAGGC
ATTGCTCGATTTTGTTTATATATCAGATCTGCCGAACACTCCTGCCGAAA
CTGTTGCTCCATTACCTCCTTCGATGTCCACCGCCTTCATCTCCACCACC
GCCACCACCACAAGAATCGAGTACAAGAACAGATTCACCGATTTTCACCA
ATTCCCGGAAATTTTCACCAATTTTGCAACACTAATCACTAAATTCTAAA
GAGAATATCACTAAATCGTATTGAGAATATCACTAAATTAAACTAAGCTG
GTTTTTAGTATTTATTTAATGGTTGGTTTGTATATGATACTAGCCTATAT
ATATAAATATATGTATATATATATATATATAATATGTGTGTATATATATA
ATATTTATATATATATTCATACATACATACTACACACACATATAGAGTGT
TACTCTTATATATGTGTGTGTGTGTGTGTGTGTCTAGCAGGAAACAGGAT
TAAAATGATAAGGTTCAAAGTACAGAGTGACTATATCCAGTATTGATCCA
TTTAGGATGGATCAATCAGTCTACCATCAAACCTTGTTGATAAATATACA
AGCATATTAGATTTTTCATACTTAATAAAGCTGGAACAAGTCGGGTCACA
CAAATGATAATATAGTAACGGGTATTATATCAAAGTGCCCACCATTTTTA
TCAAAAACTACAAGTGACTAACCGATCTCGACAGAGACTCATTTAAGTCA
CTATGATCACTATATATATCACTCCGCTAAATCTTGAAAACATATAAATG
AAAAAGTTAACAAACAAATGACGTGTTTGCTACAACCTTTTTATATTTCT
TTGTGATCTTTGGTTCTAGTTCTTTTTTGTAATCCATGTGACTCACACAT
CATCTGTTGATTTGTGTAAAGGAACCAGTTACTCTAAAACCTCAAGGTCT
TAGAGAATGGCCCTTTTCAGGATCTTATATTCTAACATTCCCCCTCACTC
GAGAGCCCATTTATGGGTCGAAGAGTGGATCACGGACGCTCATCTAACAT
TCCCCCTCACTCGAGAGCCCATTTATGGGTCGAAGAGTGGATCACGGACG
CTCATCTAACATTCCCCCTTTATGGGTCGAAGAGTGGATCAGGGACGCTC
ATCTTTGGAGCATTAATTTGCCATTCGTGCCACTATAAATTGTGAGAATA
TTGGGGGTGGCAGGGATCGAACCTGAGTCCTCTGCCAACCTGGCTCTGAT
ACCATGTAAAGGAACCAGTTACTCTAAAACCTCAAGGTGTTAGAGGATGG
CCCTTTTCAGGATCTTATATTCTAACAATTTGGATTTTATTAAGTTTTCT
ATTAATTATTTTTCAAGATTTAACATAGTGATATATATAGTGATTCCATT
GGCTAAAATGAGTCCCCCGGGTAGTCACTTGATAGTTTTTGGTGAGAATT
GTGGGCACTTTGATATAAAACTCATATAGTAACTAAAAGTATCTTAAACA
TTTAGGGAAAAAGGTGTAAATTTTAAGTGTGTTGTTTTGTAAGTGTAGAG
ATTTTTTTAAAACTTTTAACTGTCTGCTATATTACTCTAATTGTTGAAGA
GATACTAAGATCATCAATAAGATATATATTGGATTGGTGGATAACAAACA
ATAAAATTTTATGAATTTGTCTTATATAAACTGAAGGTATTTGAGGCCTA
GTCCCAGGGAGTGGTACCCCAAAGTCTTCTTCAAAACCCATAATCCATGC
TTGTTAACTTTCACTCAGTCTAGCACTAGAAAAGCAAGGCCGCAGATATG
TAAGTGACTCTAAATCACTTTAATGTTACAAGGTCACAGAATGTCTCTCC
AGAGTTTTTAATACATCCCAACTTTGCAAAGTTGTGGGTGTTTTTTTTAT
ATTAAAATACTAATGCCAAGCAGAAGGAGATATACGATATCCTAGTCTAT
ATAAGAGATATCAGTATACGACTTATGCATGAGACTATCAATACATTACT
TATGCATGAGACTATATATTAGCTTGCTTATATAGTTTTAAGAAAAAATA
TCCATTTCAGGGGAACAGGACACACTACAATCGTACCAGGGGAACTGAAG
GAGTTATTCCCAACTCTCTAGAAGAAGAAATTTTGCCTGATACTGAAGTT
GACAGCTCTCTATCTTCCAAGTTTCAGCAATATGGTTATAATGTGCCCTC
ACAAACTACTGACACAACAAGCCTGAACAGCACTCAAACCTCAGAATATG
CAGATGCTGAGTCAGGTTTGTTTTTAGACATGCCATCTTAGTTCCTAAGC
CATATTCAGTGGTCAAGCTTAGATCATGCTTATATTCAACTTTAACTAGT
GTGTTTTACAATGTTTTTATATTTTTTAGAAATTTTTTCCTATTATACTT
GAATAATCCAAAATGTTAATTTTTTTGCAGCATATAGTTACCGATCAGGT
TCTGGGCTCCAATCCTTTCACAAGTTGCAGCAGTCTGACGCAGAAAAGAT
GGATGATGCACTTTCTGTGCCTTATTATTCAGCTCTTTCAAGTAAAGTAT
TTGCTACAAATTGTTTTCAACCATTTAAGTCGTAAATAGCTCAACACTGT
TCTATGGGAGATTATAATGTATTGAACTGTTAACAGATGATTACCAAGGA
AGCATTCAAGCCACTTCACACATTCAACCCATACATCCGTCTAGAGAATC
TGCCCTGAATATTGTAACGGGATGGGGAAATGAAAATTCTGCCCAAGATT
GCGGAGATGCTTTTGGCAAAATTGAGGAGTTTGGAAATCATTTACGTGGC
CAAGGAGGGTGGCAGGTATGGAATTACTTGAAAACACTTAAAGTACATTC
GTCATGTAATGTTAAATAGTATCTACTTTATGTTTTCTTTTGGCAGGATT
TTTTTTTTTTTTTTTTTTTTTATATTTGCCTCTAGTACCAAAACTGATCT
GTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGGTTTTTTTTTTTTTTTT
TTTTCTTCATATTTGCCTCTAGTACCAAAACTGATCTGTCTACCCAGACT
TTCCCTCTCCTGGGGGGCGGGTGGCTTGGGGATTGGCCTCCTTTATTCAT
CCTAAAAATATACCCATGAAGATATAATTAGCTACTTGTGAGATGTGATT
GCCTTCTGATATGGATCATTTATTTTCTCAATAAAAATTGAAAATCTAAA
TTTCTTGTTAGGAAACATAATCGTTGAATGTGTATCCAACTTTTAGCTTT
TATAAAAATTCTTGAAATTAAAGTTTCATTTTTGATTATTCATCACATGC
TGACTAGCTTAAGTTTCATGTCAAGAACAGCAAGGTGACGCTCTAATCTT
TGAGAAATTTGTCTTGGGTAATCTCTGTAAAAAGCAATGTTATGTTCTGT
TTTATATTTTTCCAAGAATGATAATTTACAATTTCTTTAAGGGCAATCGA
TATAAGTAGCTGTAACATGCGTAAATAAGATATCTAATTATGAATAGTCC
CATGACATTTTGTAAAAGTTTAAATTCTTATTCAAAACTGTATTTAGTCT
ATGGAAATCATAAGTGTATTTTACATCAACAATCAAATTGGGATATGCAT
GTAAATTAGGAGTTTTTTTTTCTTAAAATCTGCCAGAGATAACTGCATGT
TTTAATCCAACTTGCAAATAGTCTTTTGAAGGTGAATCTTTGCACCTGCC
GAAGTGGTCCATGGAACAGAATTTGCAACAGTACCCAAATTACAATCAGA
ATGCTATGCTTTATGAAGGGAACATTGACTCTTTTGACTTGTTTAATTAC
ACGGAGTCACAACATGGTGAGCAGAATGGACAGTTTGCAGCTGCAGAAGT
TGGAAGCTTCATGAAAACAGAGGTGGAGAACAGTGCGACAGTAGATGCGA
AAGCCAATCATTTAGCCTTGAAGCAGCCATTGGATGGCCTTAAAAATCTT
GATAGCTTTGGTCGATGGATGAGCAAGGAACTCGGAGATGTTAATGAGGC
ACAAATTCAATCTAGCTCTGGGGCTTACTGGGAGGCAGTTGGAAGTGAAG
TCGCAGTTGTCGATTCTAACATTTCCTCTCAACTGGAGTTCGAAACCTAC
ACAATGAGCCCCTCTCTTTCCCAAGACCAGCTATTTAGCATTATTGACTT
CTCACCAAACTGTGCTTATTCTGGGACTGAAGTTAAGGTACATTGAATGC
TAACGTTTGAATCCCCTGCTACAAATTTACTTCAAATTTTTTTTTTGGGG
ATATAGAATTCATTTGTAATGATGGATTTGACATGACTGTCATGGAATTG
AACCAAATCCAGCCCAAAGTATTTTGATAGTCCAAACTTATCATTTGGAC
CGAATCCATCATTTGAAATTATGCGGTTGTATGTTTGTATTTCAGGAGAA
CTATATGAAATTTGTAATTTACATGCACTAAAATAAGAAGATTGTTGATG
CACTAATACATCTTGTATTTTTTTGGCTTATATGATAACTAGGTGGTAAT
AACTGGAAGGTTCTTAAAGAGTCATCAAGACGTTGTGAACTGTAAGTGGG
CGTGCATGTTCGGGGAAGCTGAAGTTCCAGCAGAGGTTGTAGCAGATGGC
GTTCTTCATTGCCATACACCCCATCACGATTCTGGAAGAGTTCCTTTCTA
TGTAACATGTGCCAATAGGCTGGCTTGCAGTGAAATACGCGAATTTGAAT
TTAAGGTTTATAATCTCAGAGATGTGGATGCCGCTGATTTAAGTAGTGAT
AGTTCAAGTGAGGCTCTTCTTCATATGCGATTTACAAATCTGCTATCCAT
AAGATGTGCTTACCATAATTCAGTTCCGGGTATCATGGATGATAATTTGA
ACTTCAGCAGTAACCTTAACTCATTAATAAAGGATGAGAATGAGTGGCAA
CAAATATTTATGCTTACAAGTACAGACGAATTCTCCTCTGAAACATTAGC
CAACCAATTTCCAGAGAAATTACTCAAGGAGAAGTTGCATGCATGGCTCC
GCGAAAAAGTAGCCGAAGGAGGAAAAGGCCCAAGTGTAGTGGATGAGGGT
GGCCAAGGGGTGCTACACTTTGCAGCTGCTCTTGGTTATGATTGGGCTAT
AACTCCCACCGTAGCTGCAGGTGTCAATATCAATTTCCGAGATGTGAATG
GCTGGACTGCACTCCACTGGGCAGCATATTTTGGCAGGTAAAGATATTGA
ATGCTTGTAAATTGTATTCTAGTATGTAGTCTTCTCTTGGTAGAAATCTC
TGCCATTCAAAACTTGTGGACATAATGTGTTTGCTAGTGCACCATTTTGT
TATTGCATTTCTGGTAATATTTTATTTCTTATTTTCTGTTAACCCAGGGA
GCATACAGTGCCTTTCCTCATCTCTCAAGGGGCAGCTCCTGGAGCATTAA
CGGATCCTTCACCTAAATATCCGAGAGGCAGAGATCCAGCAGAACTTGCT
TCTGCCAATGGGCACAAGGGAATTGCAGGATATATTGCCGAATGTGCATT
AAGTTCCCATCTTTCATCACTCAACTTAAAGGATGCAAATAACTGTGATG
CTGGAGGTGTTCCGAGTCTAAATGATGTGCAGGCAGTTGCAGAGAGGACC
CCAACCCCAATCAGTGATGGGGACTTTCAACAGGGACTTTCCTTGAAGGA
TTCGCTAGCTGCTGTCTGTCATGCTACTCAAGCCGCTGCTCGCATTCATC
AAGTTTACAGGATACAGTCATTCCAGAAGAAGCAGCTAAAAGAATATGAT
GATAGTCAGTTCGGAATGTCAGACGAGCATGCTCTTTCTCTTCTTGCTGT
CAAGTCAAGCAGAGCGGGTCAGCATGATGAGCCGGTCCATGCCGCTGCAA
CCAGAATACAGAATAAGTTCCGTAGTTACAAAGGCAGAAAGGATTTCTTG
ATATTTCGGCAAAGAGTAGTCAAAATTCAGGTTTAATGCAATCCTTCCTC
AATAAGTAGTATTTAACACAGTTTTTAAAAAAAATTATATTTAACACGGT
CACACACACTTGACGCACAATTGTCCTTATCTGCAACCATCTAGTTTTGT
ATTTAAACATAATTTTAATTTCAAAGGCTCATGTAAGAGGACACCAAGTG
AGGAAGAACTATAAAAAGATCATCTGGTCTGTGGGAATCCTGGACAAGGT
GATTTTACGCTGGAAAAGGAAAGGAAGAGGTTTGAGTAGTTTCAAGACAG
AGACACGTCTTGAGGGCCCCAGCACGCAAGGCACATCTTCTAAAGAAGAC
GATTATGATTTCTTGAAAGAAGGCAGAAAGCAGACAGAGGAGAGGTTGCA
AAAGGCCCTTGCTAGGGTAAAGTCAATGGTTCAGTATCCTGAGGCAAGAG
ATCAGTATCGTAGGTTGCTTAATGTTGTTTCTGAGATGAAGGAAACAAAG
GTATTTGATGTCTTAACCTCAAGCATGCATCATATATATTACATGTCTGT
TTCAATCATAAAATTTACAATGCTGAATTTCATTCTGAGATGCAGGAAGC
AAAGATACTTTTATGCTTTGACTTTGAGTATGCATCATATATATCACATG
TCTGTTTAAATCATAGAATCAATAACTACTTGTACTATGCGCTGATACCC
AATTGCAAGCTATTTATTTGATGGTTACAACTTAAATATCCCTGATGCTG
ATAAATGAAAAAGGATATCTTTGCTGTGTATAAATTTTGATTCTTCAAGT
GGATTATTTTTATTTCCTATCGATTCAGATTTTACTTAATTACCTAGGAT
TGCTTAAAAAGAAGCGTATAGCCGACAATAACCAAGACCTGAAAGTTGAT
TTTTTTTTTTATAATAATTAAACTCTAGATATTTTATCTTGACCATGTCA
AAACTTGTTCTTCCAAATTTAAAGCAAGACATTTTAGTGGACAAGGTTTA
ATGGGGCTTGCTCATAAAATCATACTCTATTTTATTAACTTCCATAAAAT
GGTGTACCAGTATGTAATATTTCTTGATTTCAATCATGCTGCAGGCAACA
GATGATATGGCAATGAACAACTCAGATGAAGCAGCAGTAACAGCAGACTA
TTTTGACGATGATCTTCTTGATCTTGAAGCATTACTGGGCGATGACACCT
TCATGTTTGCAGAAGCCTGATTTGATCAGTCTTAGTTTGCATTTCTTGTA
AAACTTAGATCTCTCAAATTCAGTTCAAGGGATTAGTAGGACTACACATA
TATATTAGACTACACTTATATTAGAATTTACCTGTAATCGTTTGTAAATC
CCATCTACCTGATTTAACCATGTATGTTTAATGTTTTTCAGTAATAGAAT
TTATTTGAAGAGATGACGGTGAAGATGTGAAATATCAAATTCATGCAGTT
GGTGTTAA
Sequence Length:
15308
Sequence Checksum:
cb10c71d86c4f2099952c98fdd035b04
View location in JBrowse:
Gene:
LOC108214272
Gene Biotype:
protein_coding
Gbkey:
Gene