LOC108219604

Resource Type: 
Gene
Organism: 
Daucus carota subspecies sativus
Name: 
LOC108219604
Identifier: 
LOC108219604
Cross Reference: 
NCBI Gene
Relationship: 
There are 3 relationships.
Relationships
The mRNA, XM_017393123.1, is a part of gene, LOC108219604.
The genetic_marker, MK006527 K3971, is located in gene, LOC108219604.
The mRNA, XM_017393122.1, is a part of gene, LOC108219604.
Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
Transcripts: 
Transcript NameIdentifierTypeLocation
XM_017393123.1XM_017393123.1mRNADCARv2_Chr4:3359952..3378785
XM_017393122.1XM_017393122.1mRNADCARv2_Chr4:3359953..3378785
Sequence: 
TAAAATATAACAGAAAAACAATATCTTCCCCGTGGGTTGCAGAAGAGTTA
CCACTTACCAGTTGTATCAAGGCTAATGGGGTTCTCCATTCTGCACAGAA
GAAGCAGCAGCAGCAGCTTCGCAGCTTATGTCAAATCCAATCTCATCAAA
TTTACAGGTTTGCCATTCTCATAAACCCTATTTTAATTATTGAGTTTTGG
GGTTGTTTTTTCCTTGTTTGATGGATAAATTGATTTTAATTTAACTTATA
AAGTGTAAAGATTTGATCTTTATTTAGACTTAAATTAGTATTTGCTGTTT
TTCTTGGTATTAAATCTGTAAAAATTTAATCTTTTTAATATTCTATATGT
GTATGAGACATCTTATTAGAATCATGACAGGGCTTAAGCTTTTAGCTTAA
TGGTTAACTATAAGTTCTTGAAAACTATATTCTTTGTTAGTGATAAGATT
GTAAGATTAAAGGGTTCTCGTTTAAGGAATTATTATTCTCAAACTTTGCT
TAATTGTTGGAATTGAGATTGTCTTTTTAATCAACAAAAACAATGGACAA
CGAAGTCACCCCTGTAAGGACATTGATATTGGAACACAATAACACAATTA
AATCTGGTAAGTAATAAAAGTTCTCCTACAGCTTTTATTGAAAAATGCAG
AATGGCTATATATAAGCCTTAGGCCTCATTTGTTAAATCTGGATCAAATA
TCTGGATGAGTAAAATTTCTAAACGAGTAAAATTTCTGGACGAATAAAAT
TTATGAACGGTAAATTTCTATACAAATAGAAATTCTGAACGACTAAAATT
TTTCTGCATAGAAATGATATAATAAAAATATTTTTTAAGTATGTAAAATA
TGGACTATAAACAATATTTATATAAGTAAAACTATAAATTAAAAATTTTA
AAATTAATAAAAATTAGCACAGATGTTTCACAAATTTATTATTAATTAAT
CTTCATAAATAATATAAACTTTAGATTCATTTTTATATTTTTTTATGCTA
ATTATATACTGCACATAAATTTATATATAATAAAATTTAATTCAAAATTA
TATAATATAATTCAATATAAATATATGTGTCGGGATTTAAAAAGGTATTA
AAAACTATGCACACTTTTTGAACCATCCAGACACAATCTGGAGGTTGGGT
CGTCCAGCTAAATTTCCAGTGACTTCAGGTGTCGTCCAGGAATCATAAAT
TTTAAACAAACGAGTTGAATGCCGGATGATTCCTCGTTCAGTTAATACAG
TCTCGTTCAGTGGTTAACAAATGACCCCTTACATCAGAAACATGAAAACA
GTCCACTAACCTATAACTACGGCTTAGTGGTGATCCAACTAAATACTAAT
ATGAATAATGCTAAAACAACCCTAAAGACTCGGACTTTATTCCTGAATTA
GTGGACTGTGCATACTGGAGTTGACTACTTCAACATATCCTCCCTTGAAC
TCACATTGTCATCAAACAATTAGTTCATCTGGAGCTTTGCATACTCCAAG
TTCCTTGTGTAGTTTCTGAAAAGCTTCAAACTTAAGTGGCTTGGTCATCA
AATCAGCAAGTTGATCTTGAGTGCCACAAAACAATAACTGTATAACTCCT
TCTTTTGCTAGATCACGCAGAAAATGATAACGCACTCTCATGTGCTTGGT
TCCGCCATGAAATACCGGATTCTTAGACAACTTAATAGCAGAAGTATTGT
CACATTTAATCATCGTACCATTGACCTGCTTATGGTTGATTTCTTCAAGA
ACTTTCATGAACCATATAGCTTGGCAGGCACATCCTACTGCAGCGACAAA
CTCTGCTTCTGTACTAGATAATGTTACTATGGGCTGCTTCTGTGAAGACC
AAGCTATGGCACCACCACTTAGCATAAAAACATAACCGGAGGTGCTTTTG
CTGTCATCAGAATCTCCTGCGTAATCACTGTCAGTGAAGCCCACTAAATT
ACTTGTACCTCCTCTTATATAAAACACTCCAAAATTCATTGTCCCTTGGA
GATACCTCAAAATCCTCTTGGCAATCGCAAAATGCAGGTGTGTTGGGCTG
GACATGTATCGACTGATAAGACTAACAACGAACATTATATCAGTTCAAGT
TGCTGTGAGATACATTAAGCTTCCCACTCTTTGTTTGTATAAAGTTGCAT
CCACTTTTTCTCCATCTACATCCTTGTGCAACCTCTGACCAGGAACAATC
GGATTTCGCACAGCATTGCTCTCTGCCATGCCAAAGCGTGAGAGTACTTC
TGAAGCATACTTCCTTTGACATATAAAAACTCCATCTGATCCTTGCAAAA
TTTCTATCCCCAAAAAAAATTTTGATTCACCTAAATCTGTCATATCGAAC
TCCTTCTTCATCAAGTACTTAAACTCCTCAAGTAACTCATCACTGTTACT
GGTAAAGAGTATATCATCAACAAAAATACTTACAATAAGAATGTCATCTC
CCTTTTTCTTCACAAACAAAGTCTGCTCGCTTGGACTACGTATAAAACCC
TCCTTAATAAAATATGACTCTAAGCGTATAAACCAAGCTCGAGGTGCTTG
TTTTAAGCGGTATAGAGCCTTATGCAGTTTATAGACCATCTGTTCACTTC
CTTTCTTTTTGTATCCTTTAGGTTGGTCAACATAAACATCCTCCTCTAAC
TCTCCATGTAGAAAAGCTGATTTTACGTCCAACTGATGCAATTTCCACCC
TCTTTGAGCAGCTAGAGCTATGATTAATCTAACAGTGTCCATCCTTGCCA
CTGGAGCATATACCTCTGAATAGTCAATCCTGTGACGCTGAGAATAACCT
TTCACAACAAGTCGGGCTTTGTGCTTGCTTATATTCCCTTGTTCATCCAG
CTTAGTTTTATACACCCACTTTACCCCAATTTACTTGGCTCCATCAGGTA
ACTTAACTAAACTCCAGGTCTTTTTTTTGTTGATGGAATCTATTTCACTA
TCCATAGCTATTCTCCATACAGACTTTTACGCAGCCTCCTCAAAGGTTGT
GGGATCCTCGGTTGTCATTAAAAACATGTTGCTTTCATCATTTTCATCTT
CTGATAATTCCTCACCAGATGTATAATATGCTGCCATTCTCATAAACCCT
ATAATAATTTGGGGATTTTTTTTCGTTGTTTGATGGATAAATTGATTTTA
ATTTTCATATGACAAGGTAATTAAACTGATAAAGTGTAAAGATTTCATCT
ACGGACTTCAATTATTCTTTGCTGTTTTTCTTGGTATTAAATCTGTAAAA
ATTTAATCTTTTTAATATTCTAATTGTGTATGAGACATCTTATAAGATGC
TTAAGCTTTCAGATTAAAGGTTAAGGTGTGTTTACTGTTTAGTGATAAGT
TCTTGAAACTATATTCTTTGTTAGTGATAAGATTTTAAAGATTCAGGGGT
TATCATTTAAGTAATTATTATTCTCAAACTTTGCTTAATTATTGGAATTG
AGATTGTTAGTAAAACTTTGTTATACTGAAGGAATTGCCATACAATTGTG
CTCTGCCTCACCCTTTTTTGCTGACTACGTAAAATCTGATACTTGCTAAC
ATTTACCAGGACGAATTAGGAACATCACTATTCCTGAGGAGCCAACTTCG
AATCTGCTATCACTTGACTCCAGTCCTAGAACGCCGGTACTGGAAGTAAG
GAGTTTTGGATCACCAGATGATAGTTCAGCCATGAGTTTGCCATTGGCAA
AATACGTTAATCTAATCAACGGTGAGCTTGTCGTGCCTACTATATTGCAG
AAGTGTTACATTGTGCTTAAAAAATATACTTCCGTGTTAAAATCTCAGTA
TTTAAAAAGTTTCAGTAGTTATTAGCACCTAACGCTTCCCATGGTTGTAA
TTGACACGATACAATTCCATAATTCTAGGTATATCGACGTGTGCACACAC
ACACACACGCGCGCGCGCACACACGCGTCAGCAATACTTATGGTTGTTGA
GTCGCTCGACTAGTCGTCGGCTAGTTGAGCAGGCGGTGCAGAGTGGTAGA
CTTGGCTGGGAGACTTGAAAATTGTAAGGATTTTGGGGGACTTGGTACTG
ACTGGTCAACTGGGTCGACTGGAATACCCAGTCGGTCGACTGGTTTATAA
TTTCTGCCCACTGCCCAGATTTTAGAATTTAGATTCTGCAATTTTCTACT
TGTTGAACTTGGATTCTGCAGTTTAATGTTCTGTAGTTTATGGTTTTAAT
TTCTGCAGTTAGCCACTAACTCTGCAGTTACACAATTTACATTCTGCACT
TCAAAACTGCCCAGATTTCTGCTGCTTGAAACTGCCCAGATTTCTTTATG
ATTTCTGCCTCCAAATTTCCCTCATTAGGCTGTCTTTTTTTCATTGTATG
TAAAGAAAAGATTAAGAGTAGAGAAACCTAATTTAGAATCTGGCTTATGA
ATTGACAGGATACGGTTGCATTAGAGTCATTGGAGTAGAGAATATGCGAA
AAGGACCACATTTTAATCTGATACCTGCCCGTAACTATACAAAGATAAGT
GAGGACGTAGATGAACAAACGTGGAAGGTGGAAGGTAGAGGAGCAAAAGG
ATACATGTCTGCGTCTAATTTTCCCGACATTCTTTTCACCGAATATAGGG
ATTATCTTGTCAAATACAATGGACAACGGGTACACATTTATGTCTTTATC
ACTACATGTATGTGCAATGAATTAATATTTGCATTTTATATACTTATTTT
GCAGAATCCAATTGGTAAGGTTTATGTCGCTTACCAAATTTGTGCATGTC
ATATCAATAGATATTGTTATTGTTAACACACCACACTGAGCATGAGTGTG
TATATCTTGTCCAAGACACACTCTCTTCCTCTCCCTCTGCCTTCATATTT
CTGGTCATCTCTATTTCCCCCTTATATATATGCTCAAAACACACTACATG
TACCTGTAGATCACACTAATGAGCAGTTGTACAGTAGCACTTCGTTTTTG
TCAACACCAGCAACTTCGTCCATAACTTCAATTAAGGCACACAGTGAATT
GGTAACTATTGGGTATATCATGAATATGTGTATACAAGCATATAACCCGT
GCTTTGCACCATTACTTCAAGCATATTTATATTTGTTAAATTGTTTATTA
AATTAGAATAGATAGATTTTTTTATAAAAAAGTAATGTGTTTTAATTAGA
AAGGTTTTTAAATGAAGTGGTCCCACAAAATATCTTTTTAAATAAGTAGC
TTGTATATATTAGTTAAAATTGTTATACGCTTTTAATTGAAATAGGCCTA
AAAAACTAGTCCCGTTAGGATAGTTCATGTTTGTGAAGAACATCACTTGA
ATTATGACATTTCTGTGGATAATTAAAAAAAAAACTTGGGCACAAATCAT
ATAAAATATAAACACGGTTTTGTGAAAAGGAGTTCCAACACTTTTGTAGA
CAAATGTGAAACATTGAAAACGGATGAGTTGTTTAAATATGGTCTACTTT
TAGGCTTTTACAAGTTTAAATAATAAAACTTCCACATCAACTGGGAACAT
TCTGGAAGTCTGCTAAAACCTTGTGTCCAAGGAAGAAACATAATGTTGTA
CATGCTGATGGTAATAGTTATTTAATTGAGAGAGAGAGAGAGAGAGAGAG
AGTTGAGACAAGTGGAATCATAAAATAATGTTTATAGAGTTGGAGAGATG
TCTTGAATATTATAGATTGTGCTCCATGTGTTAGATTTTTTTTCCATATT
ACCCGCTTCTTAAGTCATGCAGAATATTGACATTTGCTGTACACTTAGTT
TTACGTGTTGAATGGATTTTTGCTCCAAGATTTATAGAATCCTATATACT
TATCATACATAGGGTGGTTTATAAAAATTATCATATTGGGTTCGCTATCC
TAATTCTAATTCAAACCATTAGATCAATTTATATATCTTTTTAAGTTTAA
AAGAACCTTCGTTTATGCCAAATTGATGGTTAGTAGTTTAGGTAATCATG
TAATGTGCATGTATCTGTGTACCAAAATCTAGTCTGATTTGCATTTCGTA
TATTATGGTCTTCCGTAGCATAAACGGATTCATATCCCTTGATTTTGGAA
AGGGAATCAACCTAAATGTTAAGTTTTGGAAATTTAACCCAAAGACCCGT
ATCTATACCACGGGTCCTCATATCTGAATGTAGAATATATTCTGCAGGTC
CATGTGGATCAATTGGCAGGCAAGGTGGTGGTTTTATTTTTTGTTCCATT
AACCCGTTTTTGTTCTTACACCAAACGGTGCATGATATCCTTGGTGGACA
CATACAATTATCTGCAACAGAACAACAATTTTGAGGTCGTTTTCATAGCT
GTTGATTCTAGAAAGAAGGAGATAAGATATGGTCGTCGTATTATTGAAGT
AGAGCCTTCGAAGCATTTTGAAGAATTATTTTCTTGCATGCCATGGACTG
CCATCCCATTGTCAGATATAACAGCTAGGAAACATGTGCAACAAAGATTT
GGTATCTCCGATGTGTATCATAATGCGATTGTCATTGGCACTAATGGCGA
GATTTTGCAGACTAATAGTTGTACTATTTTTGAGACTTATGGAGGTCAGG
GTTATCCTTTCACCGATGCAAAAATACTATCCTTGAAATCTCAAGATGAT
ACAATCGCAAAAAACCCCTCCTTGGAAGCACTCCTGGCCTCCCCGGAACG
TGACTATGTCATCTCAAACAAAGGGGACAAGGTACAAATTTCACATTTGA
TGGAAAAAGTAGTGGTTAAACTCTGCAATGAGTTAGCAATAATAAATGGT
TCATATTCACATCCCTACGAGTCTAGGTGATCATATTAATTAATGCTTGC
ATCAAAATTTTGCTGCATGTATTGACAGGTACCTATCCACACACTTGAAG
AAAAGGTAGTAGCCTTGTATTTTTATGAAGATGGTTCTTGTGGTCAACTC
ACCGAAAAACTTAAGATGGCTTACAAAGAACTGGCAAAAAAGAAAGAAAA
TTTTGAGGTTGTTCTCATTTACCTTTATGACACCATTTGTACTGATGACC
GTACAGATGAAGGATCATTTTGGGAAAAATTCAAGACTATGCCTTGGTTG
GCTCTTCCATATAGGGACCCGAATTATAGAAAGCTGTTGCGGCTTTTTTG
TTTTCCTCGTGAAGATTCGCTATGTTTCACTACTACGCTTGTGATTGTTG
GGCCTCGTGGGGAATTCATTGAACCTTGGGGTGCCTGCATGTTAACCTCA
TATAACATTGAAGCATTTCCATTCACTCGTGAGAAAGTTGCCCATTTATT
GATTGAGAAGGTAAAGGAACTGAAGTTGGAAAAGCTATGGGATCCAAACA
CAGTTTTCAAAGGAAAAAATGCAACCAAGGTGAGTTTGTTGGCATATTTT
TTGTGTCTTATAAATTCTATAAGATGAGGAAAACTGAGAATCTAAAGATA
TGCAAGCATGCTCCATCATGAACAAGTCATACAATATCCAGTACCAGTTT
ATTGTCTCAAGTACATGAAATGTTTTAACTACTTCAATTATGAATCACAT
TAACTAATAGTAGTAATTAGTAAAAAAATTGTTATTCAACTTAATTCATG
TTACAATATATACTAAGCATTGGTATATAGTCACACATCTATCTATACTA
TACTATAATAAGCCAACATGGGTATAATTTGTAGTCCAAGGTTTTAGTTA
TATTTTTTGGTTTGGTACTCTCCTTTTGGTACTACAAGTCTACAAATGTG
GAGTCTATTAGTATTATATTGTTAAACAGTTTCAAATACTAAAAACAATC
ATAATAATACATTATCATATAATATTTCATTAAAAAATTATAATGATTTT
ATAAATAAAATTATTAAAAAAATTATAATGATGTTATAAATAAAATTATA
AATATACAATTTTGAACATCTTCTTTTAACAAGAACCTTCATATAACTCT
TTTTAACTTTAACGTGTTCTATTAATGATGTTATAAATAAAATTATAATG
ATGTTATGAATAAAATTATATATATACAATTTTGAACATCTTCTTTTAAC
AAAAACCTTCATATAACTCTTTTTAATTTTAACGTGTTCTATCTCAATAT
AAACACGAACCATTATATAACTCTTTCCAACTCTAATATTAAAAGTTATT
GTTGTCAAAAAACTATGTTGAAATTTGATTGATTTACTAAATATTTCAAA
GGTATTACACGATCGGANATCTCAATATAAACACGAACCATTATATAACT
CTTTCCAACTCTAATCTTAAAAGTTATTGTTGTCAAAAAACCAAAATTAC
AAAATTATATTAAAATTCGATTGATTTACTAAATCTTTCAAAAGTATTAC
ACGATCGGCTATGTTTGGAAAATATTTGAATTTTCTGATTTTTTTATTTT
TAAATCTACGTTACTAAATTCGGATTAAATGTACTAATATATATATATAT
ATATATATATATATATATATATATATTAGGATTTGTCCATTTTTAAGTAA
TCGGGTGAAAATATAGTCAGTTCAATAATATAATTTAATTAAAATTCAAT
CCGTTAATACTAAAATACCAATAAAATGATGTTAAAATTTAAATTACAAA
TAATAAATTACGAACTATATACCCGCCCGTGCTTCGCACGGGTTAAAGGC
TAGTACTATATAATAAGCAAACAAAGATATATTTTGTAGTTACATCCAAG
CTCGTAACTGAATGCACACCCGACCCAACAACCACCACGGGTTAGTCCAA
AAGAGTAATATTAGTTATTGACTTGTTAATATATAGGTCCCACGTACTTT
TATTCTTATCGGTGTGTGATGTTACAAATAGGTTAATCGCAGAAAGTATA
TTGATAGTTGAATTTTCAGTAAACAGATGAGAGTTGATATATCTAATATT
AAGGAATATTCCATATTTACTTATCAAAGTTCCAAGGTTCAAGTTCCGTC
AACAACATATATTTTTTTTGAATAATGAATCCAACTACAACCAAAGGTCT
AAGTTTGAACCCCATTAACAACATAAAATTCTTAGAATTATAAATCATTA
CCTATAATAAATCATGTTAGAATTATAATATATTGCGAATATTGTAAATT
ATTCATATCAATATCATTATAGATCTAATTAACATGGATAATATCAATAT
TGAATTAAAAATATCGCTAATATTAAAATAATTAAAATTGTAGAATAAGA
AATTATTATTTAATATAACTGTATAATCTAATGTTGCAATTTATAAATAC
TTATAAAACCAGACTTGAACTAAAATAAATATTCAAAGTATAATTTTAAT
ATATATATATATATATATATATATATATATATATATATATATTAAAAATA
ACTTATGCATTATGTTGGAGATGTATAGTCCGTCCTATATTTTTTTTGAC
AAAACGTATCTAATGATATATATATATTTTTTAATCAAGATGTATCTGAT
GATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGCTATT
CTACTACAAACCCTTCTTAATTTAAAAACCAAAATATTTTTTTTAAAATC
GCGTTGAAACATATCAAATATGGTATGCAAATTAATCGTTGAGAGATATA
AAAAAATACATTGAAATCGGATTTCAAAATAAACTTATCGATTGACGGGA
AAAATCAATTTAAAAACAAGGGGGTAAAAGCTGAAATTCTGTGCGCGAGG
GTGCATGTTAATCCTGTGTACTGCATGCTAGGGGCCATCAGATTAGATTA
AATCAAGGGCTCACATTTAGTTTTTAGTTTTTAGGATAAGGAGAGTTTGT
AGTTGAGCACTAGCCTATATATATAGTCTTACTCTAATACAAACCTTCTT
AAAGTTAGAACTAAAAATTATTTTTTTCCCTTCAAAATCACGTCAAAACA
TAGCACATATGGTATGCAAATTGATCGTTTTGACATATGAAAAAATACAG
TGAAGTCGAATTTCAAAAAAGCCTCACCGATCAACTGGGAAAATCAAATT
AAAAATGAGGGGGAAAGCTTCAATTCTGTGTGGGAGGATACAGATTAATC
GTACTGTATCTAGGGGGTCATCAGATTATACTAAATCAATGACTCTCATT
TCTAAGTTTTTATTTTAAGTCTGGTTTGTATTTGAGCACTTGACATATTT
TGGATGTTTATGTATTAGAATTTCTTGATGAAATTATTTGTAGAGTCGAT
AATGTGACAGGGTTGTGCTAGATCTGGAGAGATGAAAAGGTTAATTAATT
TTATAATAAAAATACGGCTTTTGTGAAAATTAGTGTTGTGAAAATTACCT
TTATATATCAGAAATTTTTTGCCTAAAATATGGAAAATCATTTATAAATA
TTTACTATATAATTTAATTACTAAATTATGTGATTTATCATCTTTGAAAA
TAAATAATGCATCCAATTAAGTGAATTGATTTGAATTCCGATTTCAAACA
ATTTAATTTTTAAAGTCATGTAAAATGTGGCGCATATTCACATCTTGCAT
TATTTTTAGTTACCAAATTATGTTATTTATTATTTTTTAATCAAAAAAAT
AATTCATTGAAAAGTGCTAAATGGAGGTTAATTTATTTAATAATGTAAAA
TGATAATTATATAACAAAAATATCACAAAATTATTATATGTTTGTTTCGA
TTACATATTTGAATGAAATTGTTACATGATCACTTTACCTATTTTTTTTA
CAAATCTGTTCATATTTAGCACCAAGACTATTTACTGTTTGTTTTTTATG
ATATAAATTCGCAGGGTAATATAAAAAGATATTAATTTATATCAAACATT
TGTATTGATATTAAATGTAATACATACATATATACATACATACATACATA
CCCCATCATGCATGCATGCATGATGGCAGATGGGGGATGGGGGCTGATTA
GGGTTAGGGTTGACCTCTCTCTCAAGAGATATTCAAAATCAACTCCATAT
ATTTCACAATAATAATAATCTCTGCTGAATTACAATGATAAAAGTCCTAT
ATATAATAATCTACTTTCCTAAATATTAAATAATAATAATATGACTAAAC
CTATTCTCAAATATTTTAGTAAATGGGCTTCCAAAGTCTGTTATACTGCT
CCCAAATACTTTCTTTGGCCTTTTTGACCCGCTGGCCTGCATCAATATAT
ATATATATATATATATAGGGTCCTGCTCCAATACAAACTACTAAAATACA
AACTAAATACAAACCAACGCAGATTAAGTAGAATGGTAAGGGTTTTGGGA
CCGGGGATGGACCCCGAGATGGGCCTAGACGGGGTCTAAGTGGGGCCTAG
TAGGGTTGGGGCGGGGCCTAGTGGGACCATGGTGGGGACAAGTTTTGGCT
CTTAAGGCTGTCTGGAGCCAGTCCAGGGCCTGTGAGGAGCCATGGCAAGG
CCCTAGCGGGCCCCGGGTGGATTAAGTGGGGGCGAGGGTGGGCCCTAGGT
GGGTGATGACATATAGGGGGTGGGTGATGACATATAGGGGTGGGTGAGGT
CATTTAGATATAGTTTCTCTTGGTTTCCATTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTTTAATCAAAAGCCTAAATATATATATATAT
ATATATATATAGAGAGAGAGAGGGTTACTCCAGTGAGAACTTCTTAAAAT
GAGAACCGTGAGAACTTCCTTAATTTATCATATTTTGGCTAATATAAACA
TCAAACTAGTGGGTACCCAATATAAAAAATGTATATAAAACTAGTCTCTT
CCTAGCTAGTCAAAAAAAAAAATTCAAAAAAAAAGTCCACTGCCACGAAA
CTAGTCTCTTCCTAGCTAGTCAAAAAAAAAAATTCAAAAAAAAAGTCCAC
TGCCACGTCATCAGTGATTTTATTTTTTATTCGTCATCAGTGATTTTTTT
TTTTAAATTTTTTTTTCGGCTAGCTAGGGNCGTCATCAGTGATTTTTTTT
TTTAAATTTTTTTTTCGGCTAGCTAGGTGAAGACCTTAATGATATACATT
TTTTGTGAAGGTGCCCCTGGCCCCCTTCAAATTAATGAGATTTTGATAAA
TTACAAAAGTTCTCACGGTTCTCATTTTAAGAAAGTTCTCATTTGAGCAA
GTGCCTATATATATATATATTAATAATGTTTTTCACCAAAGTAATAATCT
TGATAAATAATTTTCTTTAGTGATCCAATTAATATTATTGTTATATACTT
ATGTGATATGTTCACTAATTATATATTTAGATGGAATTGTTCCATAATTG
TTAAGTTTTGGATAATTATTGTTTTCTATAAATAATTTCTTATTCACTTT
ATTTTTTTGTTACATGTTTTTTCATATTTAGCACCTCAACTATTTAAACA
TTTAAGTTTTATAAAGCAAATTATTAATTAAACATTTGAAAATTTAGGCA
TAAATGAAAATTCTTTGTTTTATTTTAATGTGATTTGCATGTTTGATATT
ATCAAGTATTTTGATTTTTGATTAAAAAAAATTGTAAGTAAAATACAAAC
CTACATATTTAAAATTATAAACAGTAATTTTAGTATGATAAAATCATGAA
TAAAGTGTCTATTTGTGTACATATATTTTGATTGATATTGATATTGATTT
TTAAATTATTAATTGATAATTTCAGAGGAAAAAAATAAGAAGTGAGCAAT
GTTAAATATTTATGAAAAGTGATTTAAAAAAAAAGTAAAAAAAAAGTTAG
TGACGTGTGGATAATTAAGAAATAGATAGAAACAAAAAAGTTAGTGGAGT
GGTACCCTTGAGAAATTTCTAGATTCCAATGACCGTCTTCCAGTAAGATA
CCGCGTCCCGCGGAGATGAGAAAAATTGACTTGATACACTCACTGCAAAA
GGTATGTCTGGTTGAGTGACTATGACAGTAATGTAGTAAGTATTCCAACC
AATCTTCGATATCTTTTGTGATCCTCTGTTGACTCACCTTCTTTAGTGGT
TCACTTTTGCCTTTCATCTATGGGTAAAGGCCATAATTACTCCTTTGATT
TAAATATTAATAGACTGTTTGGGCAAGCTTAAAAAAAGTGATTCCGTGCT
TAATGTAAAGAAGTGGATGAGAAGTGAGAAGTAGATAAGTTAATAAAGTG
TTTGGAAAAAAAGCAGAAGTTGTGAAAGAGAAGCTAGCATGCTCAGCTTC
TTAAAAGTGCTTCTACTTATTTAGACAAACGGGTCAAGAGAAGCAGAAGT
CAGAAGCAGCTTCTGATTCTTTAAAACAAACAGGCCCTAAATCATGCCAG
AACACTTCTAGCAACAAATCCGGGTGATATGGCAGATGGGCCACTTAAAA
AAACAAACAAACATAAGCCGTATAAGTTGGTAAACCTTGGGTAAGTGAAC
ATTTAACCCTTCAAAAAAAATGTCACAATTAAACAACCCATATTAATTGA
ATATTTATATATTATAATTCTTGAATGACGAAACCTAAAAGAATCAAACT
CCAACACATAATTATATAATTCCACACACACACATGTAAGATTTAACATT
CAATACAGAATCATGAATCTTAATTGTCTGAAAGTTGCAGTGATTTACAA
GTGTCATTTCCCTTTCTTTTTTTAAAAGCCTTTCACAATTAAACCTCAGG
TGCAAACCACTCTACCATCGTGCCGCAAATAAAATGTTAGTTCTTTTATC
AAATTTAATTATATTGTAATATTCTATATATATGTTAAATTCTTATATAA
AGTATCTTCAATAATCAATCCTATTGAAATCATAAATGTCAGACTACTTT
ATAATTGTAATTCAGTGCGTGTTTTACTTTTGATAACACTGACAGGGATC
TACTTTGTATATATTGTTTCTATAATCTACAAGGATGTGTTTGCGTAGTT
GACGAAAGTGTACAAGTGAAAGTTTGCAAATGTGTTTAATTCATTCGGAC
AACTTTTTTTTAATTTTCCCCCATAAATCTGGTCCATTTCAAATTGAATA
TAGAGATTCAAAAAATAAAAAAACTCACAACCCCCTCTCCATCTATAGTA
GGAATAACAGATTCAACAAGGTTATGCACAGTAACATTATGTCTATACCA
TTACATAATTTGGATAGATAGATCGAAGAACTTTGAGTCTAAAGATTTTC
ATCTTGTGCTGAACACATGTCCCCGTGCATTTAATTTAAGGCTGATTTAT
AATGTTAAATGTGTCGGCTCCGTCAGGTTTATCTTATCAAGTTTTCTTTT
TATTTGTAGTTATATGTTTGCGTTTAAGAAGATCCAAAACTTTTCTTATG
ATGAATTATCAGGCTTTATTGGTAATCATTACATCTAGATTTACTGGAAT
ATGGTGTGTGAGGAAGGCGGAACAAAAAGGAAATAGAAATTCTGAAAAAT
AGATACTGTTTGTGTTAATTTCAGGAACATTGCTTCCATTTATAACACTG
TAGAGCCTGTCACTAGAACAATAATCTCATTCTTTCCTGCTGAGTTCACT
ATTACTATTTTCAATATCAGCAACACAATTCAAGCGAACGTTCCTTTAAA
CTAAAAATCAGAACTGAACAAGTGTCTTACATAAGATGACAGTGGGCCAA
GGTTGCTGATCATGAGTCTAACGATTGAAGGAACGGAAGATATACTATTA
AATAGTTTGTGTTGTACATAATGTAGTTTTAAAATCCAGCTAAAGCTTAA
TGAATATATATAGTCTTTTTTCCTCTCCCATCCCTTCCTGCCCCCCCCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCTTCAGAGGTC
GTGCCTTCCCTTCTGTCTATTTGAAATATATGAAGATAGCCCATTCAAGA
CCATCCAAATTAGTTGTAATGTTACTTTCAAATGGCATAAGTCTTGATGT
ATATGTAATACATCAGAATAAAGCTCAGTTTAGGTATACTATATGATGCG
CCTGCTTTCCAACTTTTCTCTGCTTATTGACTTAACAAAATTACATACAG
GTGCAGCTCTCTCAACTTGCTGGGAAGAGAATCATACTGTTTTTTGAGGG
TCATACGTTTGACGAAGGTCGCGTGGAGTTCTGCGTGGAGTTCTTGAGGT
TGTTGAAAGAAATGTATCTCGATATGAAGGACACAGATGATGAGTTTGAA
GTGATACATATCTCAAATAGCAAAAATGAATCTTGCTATGTTGAAGATGT
CCCGTGGTTGGTATCGCCCGCAACGGAGTTGTTACCTGCTGATTATAGGT
TGTATTGTTGTTTCTGTCGGTGGACTCAGTTACATCCTGATATCGGTAAT
TGTTTGCCTGGTGACTGCCACGGGAATTCTTCGATTCTTGCCTTTGATCA
AGACGGGAGGCTCGTTAGGAAATCTATATCTCTTACAATCGAGCATAGGC
ATTTCCCATTTTACGGGGGCAGTATGGAGAAGGAGGCCTTTTTTGATTAC
AATGAGTATTTTGATTATAATGAGTTTTATTTAGAAGATGGTTATCTTCA
GCCAGTGTATCAAGGGTTGCTGCGTAACTCATACTGCCATCATGACCGAG
TGCCATATCTTGAGAATATTAAGGCTGATTGATTTGTTTCTCATATGCGA
TTAGGAATTTGATAGATTTATTATTACTTTACAATAGTGAGACAGTAGGA
TATTTATCAAGTCATTTCACTGACAATCGAACTTTAAAAAATTTCTTTCT
GCAACCATGATATGAATTTATAAATGTCTGAGC
Sequence Length: 
18833
Sequence Checksum: 
3b792a3f14e14dd5ba57951cb5424088
View location in JBrowse: 
DCARv2_Chr4:3359953..3378785+
Gene: 
LOC108219604
Gene Biotype: 
protein_coding
Gbkey: 
Gene