LOC108218606 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

LOC108218606

Identifier:

LOC108218606

Cross Reference:


NCBI Gene	108218606

Relationship:

There are 3 relationships.
Relationships
The mRNA, XM_017391613.1, is a part of gene, LOC108218606.
The genetic_marker, MK008733 85036.36281, is located in gene, LOC108218606.
The genetic_marker, MK009573 4_22176369, is located in gene, LOC108218606.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100	The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
XM_017391613.1	XM_017391613.1	mRNA	DCARv2_Chr4:22165247..22182153

Sequence:

TGTTCATTAAGGGTTTAAGAAATTAAACAAAACCCTCGACCCGCTCCTAT
TCTTGCCAGACCTAACCGTCTCTCTCCTCTTTCTTCAACGTCCATCTATA
CACACAAATCCCTGTATCTATCCTTCACCACTCTCATTCAACCTGTAAAA
ACCTCCAATTCATCAATGGACTACGAAGCTCCACTCCTTGTAAGCTCCGT
AACGGAGCTCAAAAAGAAGGAAAAGCTCCAAAAGAAAGCCAAATCAGGCG
GATTCGAGTCATTAGGGTTAAGTTTCAATGTGTTTAGAGGCGTTAAACGG
AAGGGATACAAGGTGCCGACGCCGATTCAGCGCAAAACGATGCCGCTTAT
ACTCTCTGGCTGCGATGTTGTGGCCATGGCTCGGACTGGTTCCGGCAAAA
CGGCGGCGGTTTTGGTGCCGATGTTCGAGAAGTTGCGGAATCATTTGGAT
GAGTGCGGTGGGATTCGGGCTTTGATTTTGTCGCCGACGAGGGATTTGGC
GCTTCAGACTCTTAAATTTGCTCAGGAATTGGGTCGATATACCGGTACTG
ATACGTATTTATTGTATGTGTGTGTGTGTGTATGCTCCTGCGAGTATCTA
CGGTCTGAGATTTTTTGATTAAGTAATCGCCGACTATTAATTTGTAGGTT
GTTGGTAAAGAATGTGAATTGATAATAGTGTCTGAATTGTTAATAAAAAA
AAGTATGATATTATTAATTATATGAGAGATTGTTTTTAATAAAGAGGTAA
CAAGGAAGAAGATGGAAAATTGAACAAGTTTAAGGTGAACTTGATATGTA
GGAAGAGAAAGTTGAGAAATAAGCATAAAGGTGGAGAATTTGACTGTAAG
ATATATAAGATTGCATTCCTCTAGTTGGTGGCTCGGTGCTCATCATTGGT
CTTCTGCTCAATTTTGTATTCATCTATAATAAATTGTTCCTATTGGGGTA
ACTCTTAAAAGGACTACTTTGTTCTACTAGTGCATCTGACATTCTTTGAC
ACCGGAAGCAATGGAAACAAGTAGATCAGGGTTTAATACTCGCCACTCTA
AGGAATCCACCCTAGAGATAAGAGCAAACTCGCCACCCAAAGGAACCCAA
CCCCAGGGATAAGAGTATAAAGATCAATATTCTTTTAACAAAAGAAATAT
TTAATTTTTGTATTTTCAATTTCAGCTTTTGAGTACTGCCGTCGGTAGGG
GATAATATGTTTGCAAGATTACACCTCAGCTGTTCGATCTCTTTGTAGAG
TCTTCTTTTCCTGTTCCAAATCGAGAACTTTTTTCTCGTAATGTTGTTTT
AGAACAGATGTGTCAGCACCCGCAAACCGCTTCATTTCAGCCTCCTTTTG
TTCAAGTTTTTTGTCCAATTCTTTGAGCTCCATATCCAATTTTTCCTGAA
TACTAGAATGTTCTAGCTCTTTCATATCAACTTCAAATACTTTATTAAAA
TCTGGTAGTGCGAGAATAGGAGCTTCAGATACCTTTTTTTTTAGGAGTTC
AAAGCTCTTTTGTGCTTCTTCTGTCCAATGAAAGCTCCCACCTTTCAAAC
ATTCAGTGATAGGTGCAATAATAGAGCTGAAATTCCTTATGAATCGCCGA
TAAAAAGATGCTAGGCCATGAAAGCTCCGGATGTCATGAAGAGAGGCTGG
TGTAGGCCAGCAAGTTATTGCTTCAACTTTATTGTTATCCATCTTTAATC
CATCAGCTGAGACGACGAATCCAAGGAACACAAGGCTTTCTGCAAGGAAG
TGGCACTTCTTCAGATTTGCATATAATTTTTGCTCTCTTAGCACCTGAAA
AATGGCACGGAGATGTTCCAAATGTTGTTTTTCATCACGACTATAGATCA
GAATGTCGTCAAAATAAACTACCACAAATTTTCCGATGAATGGTTTAAAT
ATGTCATTCATGAGTCTCATGAATGTTGAAGGAGCATTAGACATTCCAAA
AGGCATAACCATCCATTCATACAACCCATCTCTTGTCTTGAAAGCCGTCT
TCCATTCATCTCCGGGCCTTATACGAATTTGGTGATAACCGCTGCGTAGA
TCGATTTTGCTGTGCACTTTAGAGCCTGAAAGTTGGTCAATCAGGTCATC
AAAACGCGGAATAGGAAAACGGTATTTGATAGTAATTTTATTGACTGCTC
TACTATCAACACACATCCGCCATGAACCGTCTTTCTTGGGTACAAGGAGT
GCAGGGACTGCACAAGGACTCTTACTTTCTTTAACCATTCCTTTATTCAA
GAGATCATCAACTTGCCTCTGTAATTCTTCATGTTGTTGTGGACTCATTC
TATAGGCTGCTTTGTTAGGCAATGAGGCTCCCGGAACCAGATCAATGCAA
TGTTGTATATCTCTCATTGGAGGCAGCCCAGGTGGTATTTCTTCAGGAAC
TACATCTGAAAATTCAAGAAGTAGAGGCTGCACTGGTGCTGGAATATCAT
ATACCTCTTCATTTTCTTTTAAGATAACCAAGGCATAAGTTTCCTCGGAC
TCATGAACAGCCCTGCAAATTTCTGCTCTTGACAGTAGATTGTTTCCTTC
CCCTTTACAAGGTTTAGGAATGTTGTTCATTTTTGAAGGGCCCAAAATAA
CCTTAACACCATCTTTAACAAAAGTATAGGTATTTTTATAACCATCATGG
TGAGTCCTTCTATCATACTGCCAAGGTCTACCAAGAAGTAAATGACATGC
ATCCATAGGAACAACATCACATAATACTTCATCTTTATACTTACTACCAA
TAGAGAATTGCACCAAACATTGTTTATCAACTTTTACCTCATTGCCTTTG
CGAAACCATGATAGCTTATAAGGACGTGGATGCTTCTCCGTCTTCAAATT
TAATTTTTGAACCATGTCGTTGGACACCACATTCTCACAGCTTCCTCCAT
CTATGATGACATTGCACACCTTTCCTTGTGAAGTGCATTTTGTATGGAAT
ATGTTACTACGAAGCCAAGAATCTTCTTGAGCTTGCATACTATTCAAACT
CCTTCGAATTACCAAAGATTCTCCCTGATCTTCATAAGTAATCTCCTCAT
CCTCTTGGCCACTTCCTTCAGCTTCCCATGGAGTCTGTTCTTCAATTTCT
TCCTCAAAAATGGTTATGACTTTACGGTTTGGACATTCAGAGGCTATGTG
TCCATAACCTTGGCATTTAAAACACTTTATTGAAGCTTTGGTGCCACTTC
CCCGACTAGTATTGGCTGTGCTATCATTCTTTTTGGATGATTTCAGATCT
GACCCCTTATCAGTAGGAGGAGATTTTCTTACGACACTTGAATGGGTTGT
ACCAGAAGCTTGATTTGAGAACCGATTATTGCGTCCCTTTGGCTTTTGTT
GTTTCTCCACCTTAAGAGCAAGTTTACATACATCTTGATAAGTCCAGAAA
GGTTGCAGATTAACGACATCACTGATTTCCTCCTTTAGTCCACCAAGAAA
TCAAGCAATGGTTTGCTCCTCTGGTTCTACCACCTCGCAGCGCATCATnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAG
CCTGAAAGTTGGTCAATCAGGTCATCAAAACGCGGAATAGGAAAACGGTA
TTTGATAGTAATTTTATTGACTGCTCTACTATCAACACACATCCGCCATG
AACCGTCTTTCTTGGGTACAAGGAGTGCAGGGACTGCACAAGGACTCTTA
CTTTCTTTAACCATTCCTTTATTCAAGAGATCATCAACTTGCCTCTGTAA
TTCTTCATGTTGTTGTGGACTCATTCTATAGGCTGCTTTGTTAGGCAATG
AGGCTCCCGGAACCAGATCAATGCAATGTTGTATATCTCTCATTGGAGGC
AGCCCAGGTGGTATTTCTTCAGGAACTACATCTGAAAATTCAAGAAGTAG
AGGCTGCACTGGTGCTGGAATATCATATACCTCTTCATTTTCTTCTAAGA
CAACCAAGGCATAAGTTTCCTCGGACTCATGAACAGCCCTGCAAATTTCT
GCTCTTGACAGTAGATTGTTTCCTTCCCCTTTACAAGGTTTAGGAATGTT
GTTCATTTTTGAAGGGCCCAAAATAACCTTAACACCATCTTTAACAAAAG
TATAGGTATTTTTATAACCATCATGGTGAGTCCTTCTATCATACTGCCAA
GGTCTACCAAGAAGTAAATGACATGCATCCATAGGAACAACATCACATAA
TACTTCATCTTTATACTTACTACCAATAGAGAATTGCACCAAACATTGTT
TATCAACTTTTACCTCATTGCCTTTGCGAAACCATGATAGCTTATAAGGA
CGTGGATGCTTCTCCGTCTTCAAATTTAATTTTTGAACCATGTCGTTGGA
CACCACATTCTCACAGCTTCCTCCATCTATGATGACATTGCACACCTTTC
CTTGTGAAGTGCATTTTGTATGGAATATGTTACTACGAAGCCAAGAATCT
TCTTGAGCTTGCATACTATTCAAACTCCTTCGAATTACCAAAGATTCTCC
CTGATCTTCATAAGTAATCTCCTCATCCTCTTGGCCACTTCCTTCAGCTT
CCCATGGAGTCTGTTCTTCAATTTCTTCCTCAAAAATGGTTATGACTTTA
CGGTTTGGACATTCAGAGGCTATGTGTCCATAACCTTGGCATTTAAAACA
CTTTATTGAAGCTTTGGTGCCACTTCCCCGACTAGTATTGGCTGTGCTAT
CATTCTTTTTGGATGATTTCAGATCTGACCCCTTATCAGTAGGAGGAGAT
TTTCTTACGACACTTGAATGGGTTGTACCAGAAGCTTGATTTGAGAACCG
ATTATTGCGTCCCTTTGGCTTTTGTTGTTTCTCCACCTTAAGAGCAAGTT
TACATACATCTTGATAAGTCCAGAAAGGTTGCAGATTAACGACATCACTG
ATTTCCTCCTTTAGTCCACCAAGAAATCGAGCAATGGTTTGCTCCTCTGG
TTCTACCACCTCGCAGCGCATCATGAGATTCTCAAATTCTGTCATATAAT
CTTCCACGGACAGATTTCCTTGTTTAAAATTATGAAATTTGAGAAAAGCA
TCTTGCTTGTAATTGTCTGGCAAAAACTTTTTTCGCAGCTCTTTCTTCAT
CTTTTCCCAAGTGCAAATCTTAGCCTTTCCATCACGAACTCGTTGCTTCT
TAAGATGTTCCCACCATAAGGAGGCATATTTCTTCAATTTCACCGCCACT
AATTTAACCTTTTGTCGATCATGCACATCATTGTATTCAAAAACTCTTTC
CACCGTATTAAGCCAATCAATAAATTCATCTGGATGGTTTCTTCCTTCAA
AATCTGGAATTGTGATTTTCACATTGTAAGCACCTTGAAAATTGTTGAAT
TCTCTACGAGGTCGTCTAGGAGCAGATGTATGACTTGAGTGATCATCTGA
TTCTTCATGAAAGGGATTGTAGTCCTCATCATCAGGTGTTGATGAGCCAT
TTTCTGAGTTATGACTGCCTGTGTTATGTCCTCTGCCTGCTCCACGTGCA
AGCTGTTGTTGTAGCTCCTCTACTTGTCTTCTCAACTCCTCTAATTCAAT
ATCACGTACATTCCGTCGACGTGGAGGCATGGCTCTGATACCAAATTGAC
ACCGGAAGCAATGGAAACAAGTAGATCAGGGTTTAATACTCGCCACTCTA
AGGAATCCACCCTAGAGATAAGAGCAAACTCGCCACCCAAAGGAACCCAA
CCCCAGGGATAAGAGTATAAAGATCAATATTCTTTTAACAAAAGAAATAT
TTAATTTTTGTATTTTCAATTTCAGCTTATAGGTACATAGTTGTGATAGT
CTTTATATAGACTTGGCCAGAAACATCCCTTCTGCCATAGGTAGGTGCAA
TGAACATGAGATTAATGCTAATCTTTTGATATTCTTTGACTTGGACTACT
AAAAGATATAACTGATATCATTCCTAGGGACTTGCTAATACATGAACTAG
CCTAGTAAATGATATGAATACCAGAAAATAATCTCAATGCAAATACTTTA
ACTCAGAATGTACCCTGCTGGACAGCTTGACCACCTCTGACTAAAAATGA
GATAACTTCTTGTAGAAAATGTATTTCTTTGATCCGTAAAATTTGTTGAA
AACTAGACTCCAATACCTTTCCAATGATATATCACACTGCACCCAGAACG
TCCTAGATAAAATCAGTTTATTCTTCGAAGTTGACTCAAAATATCCTCAG
AATTCTGAATTTTCTGCGTCATTCTCCCCGGGTTGAAAAGGACTCGTCCT
CGAGTCTTTATTGCCGTCATTATCTATGTAAGGTGAGAGATCGGACACAT
TAAATGTAGCAGACACACCATAGTTACCAGGCAGTTCAATCTTGTAAGCA
TTTTCACCAATTCTTTGAAGTACTTTAAATGGGCCATCAGCTCTAGGACT
TAACTTTCCGGATCTTCCTCTAGGGAAGCGTTCTTTACGCAGATGAATCC
ATACCAGATCACCCTCTTTGAAGACAGCTGGTTTTCTGTACTTGTCTGCT
TGCTTCTTATACTTCTCATTTTGCTTCGCTATTTTTAATCTGACATGCTC
ATGTAGCTTCTTGATGTGATCAGCTCTATCAGCTGCATCTCCACTGAAAT
GACTAGTAGCTGGTAGCGGAGCTAGGTCCAATGGACTAGAAGGATTCTGA
CCATAAACAACCTCAAAAGGACTTTTTCCCGTTGTCTGGCTTATTGACCG
ATTGTATGCAAACTCGGATTGGGCTAACGTCAGATCCCATTGGCGTGGAT
TGTTACCAACTAAACTCCTCAATAGATTTCCGAGACTCCTATTAACAACT
TCAGTTTGTCCATCCGTTTGTGGATGATGGGACGAACTAAATTGCAGATG
AGTTCCCAGCTTCTTCCATAATGTACGCCAAAAGTGACCCGTAAACTTTG
TGTCACGATCTGAAGTTATTGTCTTTGGAACACCATGGAGTTTCACAATC
TCTCTGAAATATAAGTCAGCCACATGAGAAGCATCTAATGTTTTAGAACA
TGGCACAAAGTGAGCCATTTTTGAAAATCGATCAACTACTACCATTATAG
AATCTTTGCTTCGTTGAGTTCTTGGTAACCCAACCACAAAATCTAAACTC
ACATCTTCCCAAGGTGCAAGAGGAACCGGAAGTGGGGTGTATAATCCTGT
ATTTTGTGAACGACTCTTTGCAATGCGGCAAACTCGACATCCTTCTACAT
GGCGTTTTACATCACGTTCCATCCTTGGCCAATAAAAATTTTCTTGGACA
AGAGCAAGGGTTTTGTCTCTGCCAAAATGCCCAGCAAGTCCTCCTTCATG
AGCTTCAAAGATTATAGCTTTCCTCAAAGAACAAGCGGGAATGCAAAGAC
GATTATTTTTGAAAAGAAAACCATCTTGAATAACAAAGTCACGAATTGGC
CTATTGGAAGAATGTTCCCAAATCTGACCAAAACAAGGATCATCTTTGTA
CAGCTCCTTTAGAATATCAAATCCCAGCACCTTTACTTGCATAGTGGACA
TCAATGATCTTCTTCGACTTAAAGCATCAGCTACTTTGTTCAGAGCACCA
GATTTATGCTTGATAGAAAAGGTAAATGATTGAAGAAATTCCACCCATTT
GGCATGTCGAGCACTTAACTTCTGCTGAGAGTTGATATACTTCAGCGCCT
CATGATCAGAGAAGAGAATGAACTCCTTATGTAAAAGATAATGTTGCCAA
TGGTCCAATGCTCGAACAATAGCATAGAACTCTTTATCATAAGTTGAATA
ATTTTTACGACCATCGTTCAATTTTTCACTGAAGTAGGCAATAGGTTGTC
CTTCTTGGCTAAGAACAGCACCAATTCCCACATTTGAGGATATTTTGAGG
ATATTTTGAGTCAACTTCGAAGAATAAACTGATTTTATCTAGGACGTTCT
GGGTGCAGTGTGATATATCATTGGAAAGGTCAACCGCGATCCAGCTGCAG
CACAGATGCAAAGAATGCGGAACCAAATTGAGCAATTGCAGGCTGAGTTG
CTTTACATTCATGGAGAATCTGGTAGGCCGTTCGAGGAACTTCTGATTTT
AAAGCAGAAGATTTCTTTGCTTGAGGCTAGCAATGCAGAGCTACAACGGC
AGCTTCAAGAATGTCGGATCAGCTCTAAGCATCTCTGGCAACGAGCTATT
GATGATCAGGTAGAAAAGGATAACCGGATCATGAAACTTGAATTGGCACG
TAGTGGTAAATCTTGGGAGGAGATTGACGCTGATCTGAACCAGAGAGATA
TTGGGTTGGTTAAAAATTATGTGACGGAATTAGAAGGTGAATTCCTTCGA
ATACAGAAGTCGAATACTTCCGAACACCATGAATTTGCAGGTTACCTTAA
ATTTGATGTTGTTGGGTCTGCTCCAAAAAAATCCCTGTTCGATCAGTCGG
ACACAGAAGCTACAGATACTGATGGTGAAGCTGAAATTGAAAATACAAAA
ATTAAATATTTCTTTTGTTAAAAGAATATTGATCTTTATACTCTTATCCC
TGGGGTTGGGTTCCTTTGGGTGGCGAGTTTGCTCTTATCTCTAGGGTGGA
TTCCTTAGAGTGGCGAGTATTAAACCCTGATCTACTTGTTTCCATTGCTT
CCGGTGTCAATTGTGCATGATAAATTAGGCGATAGCAGTTGCTTTTTTGA
AAATGGGCCATAAGTAAGTGTAGGAGTCTTGGAGAACATCCCAGAATTTT
ATATCTGGAGCAATACAGGTTCTTGCCGAAATACACATGAGTACATGACC
TGTTTTAATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAACCGGATATGATCCAGTATCGTATTTCTATT
TTTTAACCGGGTAGTTTATGATCCATCGAATATGAGCCGGATATGATCCA
CTAACACTAAGTATCATTATTATTTCAGTTGTTCAAATAACTATCATTAG
TCTAAGTAAACATAATATTATAAAGTATAATAATTTTAAATTAAAACTTA
TAGTTATATATTGATATATATCATTTATTAAATATATATGAAGATAATAA
GTATGATCACATTAAATAAATCATATTTTATGAAGATATAAACTTAAATA
AGATATTAAAATTTTATAAAATGATAACTATTTACTTGCAAATATGATGG
TGTTAAAATATAATATGTATATAAGTTTGAATCGAATATGAACCGCGGAT
CATATTCGGTTATTCGGGTAGGATCATATTATGAAAAGTTATATGAGCCC
GGATCTGAGCGGGTATAGGTGTGCTCGTATCCGGGATCATATATTATACG
GGCTTAATTTTTCCGCCAGATTTGGATCGTTTTCAAAACGTATATGAGAC
ATGTATCATATTTTCGAGCCGAATATGAGCCGAGACACCGGATAGTCCGT
ATCGATTTACAGCCCTAATCAAGAGAGAGACATGTAGTTTCTCCTGCATG
ATGCTTGTATATATGATTATGCATTTTGGGAGCATATTCATTGTATTAAC
ATAATATTGATTGCAGATCTTCGAATTAGTTTATTAGTAGGAGGCGATAG
TATGGAAAGTCAGTTTGAAGAGTTGGCACAGAACCCCGATATCATTATTG
CAACCCCTGGTAGACTCATGCACCATTTGTCTGAGGTTGAAGATATGTCA
CTGCGTAGTGTGGAGTATGTGGTTTTTGATGAAGCTGACTGTATCTTTAG
CATGGGGTTTGCTGAGCAGCTGCATCAAATTCTGTCCAAACTTAGTGACA
ATCGTCAAACCTTGCTCTTCAGTGCAACTTTACCAAGTGCCCTTGCCGAA
TTTGCCAAAGCTGGTTTACGAGATCCCCAGCGTGTGCGACTTGATTTGGA
GACTAAGATTAGCCCTGACTTGAAGCTTGTCTTTTTCACTTTAAGGCAGG
AAGAAAAACATGCTGCATTGTTGTACTTAATTGAGGAGAGGATTAGACCT
GATGAACAGACTTTGATCTTTGTTTCCACAAAATATCACGTTGAGTTTCT
TAATGTTCTCTGTCAAGAAAGGGGTATTCGTCCATCTGTTTGCTATGGTG
ATATGGACCAAGATGCTCGCAAGATGGCTGTATCCCAATTTAGATCAAGA
AAGACTATGCTGCTGATCGTGACTGATGTAGCAGCCAGGGGGATTGACAT
TCCTCTGCTTGATAATGTCATCAACTGGGATTTTCCTCCTAGACCTAAGC
TTTTTGTCCATCGAGTAGGACGAGCTGCAAGGGCTGGTCGGACTGGTACT
GCATTTTCTTTTGTCACAACTGAAGATATGCCCCATGTTTTAGATCTTCA
TCTCTTTCTTTCAAAGCCTGTCAGGGCTGCTCCCACTGAGGAAGAGGTTT
CACATAATGTGAATAATCTCATGTCTAAAATTGATCAAGCAATTGCCAAC
GGAGAAACCGTTTATGGGCGCTTCCCTCAGACAGTTCTTGATCTCTACGC
AGATAGGGTTCGGGAGTTACTGGATTCTTCTACCGAATTACATTCATTGG
AGAGGCCGTGTACTAAAGCATTTCGTTTATATTACAAGACGAAAGCAAAG
CCTTCTAAGGAGTCTGTTAGAAGAGCAAAGAAGTTGCCCCGTGAAGGACT
TCATCCAATATTCAAAAGTTCGCTAGGTGGTGATGAGATAACTGCACTTG
CCTATCTTGAGCAGTTGAAAAAATACAGGTACATTATACATGTTATGGTT
AGATGTTTAAAATGTAAGTTTGTTTTGTATAATATTTAGACGAGGCTCTG
ATTAATATTGAATCAATCTGTTGTAAACTAGACCCAAGCAGACTATCTTG
GAAGCTGAAGGTGAAGTTGCTAAATCAAAGAAAGTAAAAGTAAGATTTAC
ATTTGTTGGCATGAATTTCTTTTGTGATTTATACTTTTCGAATGTGTATG
TGCAACATAGTCTTGTCTATAGCCTGTCTATGGTTACAGACACACACATA
CATTAATATATATATATATATATATATATATTTATATATATTTATATTAG
TCGGTTGGTTCTCGATATGCTTTATTGTACTTCACTTTCTAGTGAAATTT
TTTAATTATTACATTGATATGTTATGTGATTGAAGGGGTCTGCAAGTCAA
GGGGGTGATGTAATGAAAATGAAAAGAGCTGTGCATGAGGAGATCATTAA
TAAAGAACATCAGAAACACTCCAGAGAGTGTGCAGAAAAGGTGAACTTGA
TGTTTTGAACATATGAGTAGACATTTTTGACTTCATCAGCATGATAGGAC
TTAGTCACATATATACAGCAACTATCGTACTCGTATTATCATCTTGTTTT
GTATTCTTAGAGCAAGTAACAAAATATATCTGTCAAACTGTTAAGCACTT
GAGGGAGCTGCTGAGTGCTGAGACAGGCTTGCAAATGCTGAAAAATTAGA
CATTTGTTATTTTGTCACCGAGTTTTCCAGGGTGTGATTCTGAAGTTAGA
AGATAAGATGATAATGTTCAGATACTTGTGTCCTCCGTATAGGTCCTTAG
TCATGTGCGATTGCCCGGAGCCAACTCTAATATCTTATGCCTCTTCTCTT
ATTTTATAATTTCTGCCTCGTAGAGATTGGTTTTGTACTTTTGCCTGAAT
TTTCCTGATCTTCCCTTGTAGGATCCCTTTCAATAATGTAGTGATTGTAC
ATTTGTATAATCTGCTCAGGGCATCTTAAAGATTAATGCCCAGTGGCAGC
CAATGTTTAAATACCTTACTTTATGGAGCTGATTTTAACTGTGACAACAT
GTAAAATGTTATATAATGTTTTTTAGATCTCATATTGTGAGCTAACCTTA
TTGTATTGTGCACAGAAATATGAAATGGATGATGATATGGATGAAGTTAT
GGAAAACGTTCCTACAGCTGGCATTGAAAAGAAAGGTTTGTCCTTGGCTA
ACTCTTTATCGCATGTTTCGGTCTTGTTTGTTCTATGTTTCTTGTATATT
CTTCATCAGAGTTTTTACATGGTTAACTTTTGCATTGCTAAATCTTTATG
AGCCACCATATTAGAGATCATTATATGAGTGGTAGAGGAATCAACTATGA
AATAAATACCCTTAAGAAGTATCATTTGTCGCTTTTACTTTTGGTGATAG
GCTGAAAACTCCATATACTCAATTGGATTATTCAGCCAATGCTATAAAGG
AGTTTTAGTGTGGTTTCCCTTGAATTACAGCCCAGGGGAACCTAATAGCA
TTTTTGTTTATATGTTGGGCATCAGAAACTGCAAACATGTACATGTTGTA
GACTTGTAGTAAGCCATCTCACCGACGTAGTATAACAATCATTTGCTACT
TTAATGTGACAAGAATAGTAGTCCGCCAGCATATTTAAGTAATATTGTAC
CCAGTGTGATGTAAAAAATAATCTGTGGAATTTCAGATGTACAAACCACG
TGTTTGGTTATTAACTTATACAGAAATAGATCAGTAATCCTCTTGTGGTT
ATGCTGTTGCATTTTGACTGTGCTTAGACGTTATTGTAATACAAGTGAAT
AAGTAATGGTTTTTGCTGTTAGGATGTAATTCCTAATTAACATCTCATGT
TTGTGTAATGCTTGCAATGCTTGTGAGACATGCTCGTATACTGTGTTCAT
TTTTTTATTCTTGGCAGTTTATTAATGAAAAATAAATGGGCAAAATTTGT
TCATTTTACTAGTTTCTGGTTCTAAAAGGAAGGCAAAGAGCTTCAAGGAT
GAGGAGTACTTCATAAGTTCCGTGCCAACAAACCAAGTAAGATTATTTTG
TCAGGAAATAAGAAATTTTAGAGTTGAACAGAAAACCATATTATGCTACA
GGCTTGACAAAAAACTTGCCCCATCGTCTGTGTTCTGTAAAGTGATTGTG
TTTCTCCTGTATCTTTGCGTGTTTCTGAGAATGATGGTTGTAACAATTCC
ACCTGCCAGAACACGTTGTTCAGTAAACTATTAACTTCTTTGTGGTTAAT
CATTTCAGCATTATGAGGCAGGACTTTCAGAAAAGGGCAGCAGAGGGTTT
GAATCTAATAGGTAAAGCTTTTTTGCCTGTTTATCTACTTTATAAGCATT
TATTTATTATGTAATTAAACTGTGCTGGCCTTTGAACTGCTATCCTATTC
GAGGACTTGGTTGGTTTGAATTTAGTTCCTTTTGCTAGTTGATATTCAAT
CTGTATATGATAAGATATGGAACAAATGGAATCGAAATAGGTATCATTGG
CGCCAGGTTGTTAAAAGGAGTTACTTAAGATGCTGTCACGAAGTAAATCA
TTATAAATGTAATGAATTGTCGTATTTATTTAAATTTTTGGAAGTTGGGC
TTATACTTGATTGTCATGGTATTGAAGTAAATCCATATCCTTTTTTTAGG
GAATTATGAATATGTCATTTGGATAGTGTAAAATGAAGCCCTGTTCCTAA
ATATACCATAGGATTATCTTATATGAATGTTCTTTATCTGAATAACCGTT
TTGTTGTATTTCTTTGTTTTTTTACATTTTAATGAATTAGGTATTTTATA
AAGGTTACTTGGCAGATTTTATAACTTTAGTTAAAAAGCGTCAATGATTT
TACGAAGTTTAGAATGAAAAAGGATCATGTAAGATTTCATGGTTATCACA
TGGGCAGTATTGTGCAAAAATATTTTATTTTAATATAATACAAGCATATA
ATTATTTTTTTACTTCATATTTAAACTAGGAAACAGATGTGTTTATTATG
TATTCTATCAAATAAATCTATGTACATTACAGACTTGTCGACTTGTTATA
ACTAGTCTTCTGGAAGGCACTCAAGTGGCTCAAGGGACTTGGCATCGTGA
TAAGTAATTACCAACAAAACCACACTTATGGTTTTGGTGCATAGCACTCA
TGGAAAAATAATTCTTGACACATAGCACTTGTGGAAATGAGTAGGTGCTT
TTGTTTTTTTCCCGTTTTAAAATTGGATATCGTCTCTGATTACAAATCTG
AAATGGTCTTGCTATCGGTCATTGATCTTGTGTAAGGAGATATATTCCCC
ACATCTCCTATTTTTGTTTCTTGGAATCAATAATTAGAAACTCTAGGTTG
TAACCTTTCCTGCATCATTTTGTTGTTGATCAATGATATAGGTTAGATGC
TGATGTTCTGGATCTAGCTGCGGATGATAATAGTGGGCTGCAGAAACAAA
AGGCATCATATCACTGGGACAAGGTTTATAACTATATATGTTCATGTATT
GATTAGTCAATTTGGTCACTCAATCTCTCCCTTACAAATGATTTAAATTT
TATGGATGACAGAGAAGTAAGAAATACATCAAGCTAAACAGTGGGGACCG
TGTAACAGCTAGTGGAAAGGTAAGTGATATCTCACTTGCATGAGTCCGAT
GATTCAGTTAAGGATAAAGCATCCCCGTTCACATTTGATTGGTAGAAACT
TGTATGATACGTTCTTAGCTGAAAGGTTTAGGTGGTGATCTTATAAGGAA
GCAAGAGCCAATTTGGAGTAGATACTGTAAAGTATCATTTTTGGAAAGAC
CCAAATGGAGTATTTAGTGTCACGCTTGTAACGTTTTCATTATTGGCAAC
TTTTAGTACTTACATTAACATGTGCAGGAGTGGTTTTTTCCTGGATTGTA
GGTCTAGATTATTTTCCTTTAGTTTTTTGCACAAGTAGAAAGAAGACTTG
ATGAAATCAATTAGCAAGAGCAAAGACTCGAATAATATTTGAATACGTGA
TGCAAATTATTGATATATATATAGATATAGATAATGTTATACTTTTCTCT
GTGTCTTGTTTAAAACAAAGATAATTCTGATTGAGGTTGTTACTACTCTA
TATTATTTACCAGGATATTTTTCAAAACTTAAATGTAAATAATGGTGTGC
AGGTGAAGACTGAAAGTGGCGCAAAAGTCAAAGCTAATAAGACTGGGATA
TACAAAAGATGGAAAGAAAGGTCACACAATACAATATCTTCCCGAGGAAC
AAGTCGTGATGGCGGTGCTGAAGAACCTACGAATATTGCAGGTAAATCCT
TTTGAATCACCGTGGTGTCTAACTAATATGTCTTTCCTACTATAGATTTT
ATTTCGGTGTTGGTTGTTATTAAGCATATTCCCCATTTCAAGTTGCATGC
ACTTGGACAAAATGTGTGGCATGACTATAGTTATCAGATCTGATGGTACA
CTAGGGTTGCTTAGGCACAGGTGTGCACCTCAACATATATTTCAGTGTCG
AAATGACAAAATGTGTGAAATGAATATTTCAGTGTCACATTTATGCGCAC
ATTTATGTTGCGTGTGGTTGGAGTGAATGTATTCGGAAGGAATGGAATGA
AATTTGAACTATGTTGGGGATAATTGTTAATAAATTCCATTCCTTATCCC
CTATACTAGATAGCACACCCCCAATTTGGGAAGGAATGCTTCATTCCTCA
TATACTTGGTTTCTTTTCAAATTTCATCATAACAAACTTGTACTCACTCA
ATTATTTTTCTTCAAAACTTCCCTCCTACCTCTGTTATCTTTATTTATTT
TTAGTCATTCCATTCTATTGTCCCTAACCACATTCTATTGTCCCTAACCA
AACACGACATTAGGATTTGTCTTCAATCATGAGTAAAACAAAATGCAATT
GGTCTCTAACATGGATTATTCTGTTAGGTGCTCGGGGGCGTATGGATAGC
AGAAGGTTTAAAGGTGGAAAACAACGGCAGTCTATACCTAATGCTCATGT
GCGTTCGGAATTGAAAAACAATGAACAAGTTCGGAAGGAAAGGCAAAAGA
AAGCAACCAAGCTTCAACAATTAAAGAGTAATCCCAAGAGGGGTAAAAAA
TTTGGTAAAGGGGGGAAAAATGGCAAGAGAGGAGGAAAGTCAAGGTAATT
GAACACGAGAGACTTGGTTGTTTTGCTCCCTCTGTGCTCCGGGGGTAACA
AATTTTTTTTGAAGATGTAACAAGTTACTTGAAAAATATACATTTTTAAA
CTGAGA

Sequence Length:

16906

Sequence Checksum:

8ca319707626c1cd1df3291acb6fd5d5

View location in JBrowse:

DCARv2_Chr4:22165248..22182153+

Gene:

LOC108218606

Gene Biotype:

protein_coding

Gbkey:

Gene