Resource Type:
Gene
Organism:
Name:
LOC108218589
Identifier:
LOC108218589
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017391591.1, is a part of gene, LOC108218589. |
| The genetic_marker, MK009566 4_22665470, is located in gene, LOC108218589. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017391591.1 | XM_017391591.1 | mRNA | DCARv2_Chr4:22652721..22671636 |
Sequence:
GTTGTATCTCGTAATTACTGAATTTGCTTCTTCGGTAGCTCGTTCGTCTT
GGTTGATTGCAAACACAGACAAGGAAGACAGCCCAGCGACATCGTGATAT
ACACACACATATACATACAACATATAGCTCAGCATACACTCTTCTTCTCC
GTAAGACTTCTCCGATCTGTACTTTCCCTTTGATTTTCAACACTCTCTTC
GCCATTACATACACATATAGATACACAATTCTGCAGATTCATTTCCACAG
CTTTGTCAACTTCTAGGGTTTGTGATTGTTCGATTTCTAGGGTCTGATTG
CTGTTATGAACTTGCTTTGAAGTGTCTAGGGTTTGAATTGAAGTTTCAAT
TTCTGAGAATTTTAGGTTAGGTTTTGTGATGATTTGATCTGGAATGGCGA
GGCTATTGGGATTGACTCGCGGCGAATACGAGTCGCCGCGAGAGGTTACG
AGAACAATCCCAACTAGTGATACTAGTACTGAGAATGGCTGGTTGATTAG
GTTTTTTGATTCTGCGTTTTTTTGTGAGTGGATTGCGGTTAGTTATTTGT
ATAAACATGATCATCCCGGTGTGCGGGATTATTTGTGCAATAGGATGTAT
ACGTTGCCGTTGTCTGGTATTGAGAGTTACTTGTTTCAAGTGTGTTATAT
GTTAGTTCATAAACCGAGTCCGTCGTTGGATAAGTTTGTTATTGATATTT
GTTCAAAGTCGCTGCAAATTGCGTTGAAAGTGCACTGGTTTTTGATGGCG
GAGTTGGAGGATTCGGATGATAATGAAGGGATTAGTAGGATTCAGGAGAA
GTGTCAGATTGCGGCTACTTTGATGGGGGAGTGGCCTACTTTGATTAGGC
CGCAGAATGTGTCTTCGAATCCACTAGGTAAGAATCAAGTTCTTAATAGG
CTGTTATCATCGAAGCAGAAGCTTTTGTCACTGACTTCGTCACCCCCTAC
TCAGCGTTCAGCATCGTTAACAGTCCCGTCAGGCAACTCTTTGCAGGAGG
ATGGTAGTAAAATATCATCTGACGAGAGTAAGATTTTTAAGAAATTTATG
CCGGGTCAAAAAGTAAGAGATGCATTACTTTTTAGAAAATCAGTGGAGAA
AGATGACGGGGAGACGGACAAGGATGGGTTTTTCAAGAGGCTCTTAAGAG
ACAGCAAAGACGAGGATGTTAGGAAGTCGACTGATAAAGATGAGGAGGAG
ACCGAGAAGGATGGTTTTTTCAGAAGGTTTTTAAGAGACAGTAAGGACGA
AGACGAGGAGCTCACATCGAGCTCAGAGGGTTTCTTTAAAAGGTTGTTTC
GTGACAAAGCTGATTTAGAGGTGGTTACCAAATCTGTAGAAGATGATGAC
AAGGAAGGTTTTTTTAGGAAGTTTTTCAAGGATAAATTTGAGGACAAGAA
GGATGGCATTGACCAAAAGGACATTGATTTGATAAAATCTGTTGAAGATG
ATGAAAAAGAAGGGTTCTTCCGGAAACTTTTTAAAGATAAATTTGATGAC
AAAAAAGATAATTTAGACAGAACTGATGAGGAGACCAAGGGGCCAACCAA
TGAAGACGAAGAAGAACATTCTGAAGTTCCATTATTCCGTAGATTTTTCA
GCCTGAACCATGGAGATAAGAAGACTCCTGGAACTGATGAACACAGTAAT
GGTTTGCATGAAGGCGGTGCAGGTAGTCCGGGGACGGAGAAATTTTTCCG
CAAGTTGTTTAGGGATCGTGATCGTTCTGTGGAGGACTCTGAAATTTTTG
GTTTAAAGAAGCAAAAGGAGGTTAGCAAAGTTATATATTGTTTAGTTTTA
TTGCAGTGGTTTCTTATTAAAATTCCTCATGCTTTTTTAGCTTTTACAGT
ATTATTTTCATTGTATTAATGCGTGTGGCTTCTCTCTTGTACTATCCGTT
ACTTTGTTTTGAAGTTGTATGAAGCTTAGAGGGTCACACACATGATAGAC
AGTAAATTGGCTATCAATAATTATGCGTTAAATCCAACTTGTGCTTCTTG
ATTATCAATTGTTGTTTGGTGCTCCGATTAGCAAGAAACTGATTTTAAAA
TTAAAATTATCAATAGTGTAGAATAACGGATTATCACTTTAGGGATGGGA
GAAGCTGTAACACCTCTAGCCATGTTAAGTTAAATATAAGTACACTAAAG
TTGGCTAGGACAAATTCCGCCTATCTGTAGACCAAAGGGCCAAGACTCAT
CAACCTTCACTAAACTTTTAAAAAAGGGAGGGATCCCTTGAGGCTCCTGA
AAGATATAGACAGTAAATTGTCATAAGTTAAAAAAATGTTGAAAACCTGG
GAAGAAGAGAAATGGAGGTAGATTTTATTTTAAGCAATTACAAATGACGT
ATTTCAATTGATTATGGACCTTACTGAAATTATGTGAGTATAATATTACT
AGCATCTATACTTATCAGATTCAGTTGTTCGTATGCACAGAAATAAACCA
TACTTTCTTTTAACAAACAATAATAACAACTCACTGGCCTTTTGTATGTG
ATAGAATTATAGTATATTATACAATTACAACTCAGTGTCTTAATATTCCA
TTCCCATTTAATCCATGCACTTATTACGTCTTCCTGCTTTATTTAGCATT
CTGCTGCCATCACATAACATGAGTATGAAATTCGGTTATGGAGCAAGGAA
CCAATAAATTATTTATCAAGTATTTTTTATGTTACTTTGAGATACATATA
TCTATTATACTTGGTATTTTATTATATCAGGACGTAGTACTAACAGATAT
ATGTGCCTTAGTTAATCATATCAGTAGAATTTTTTATATTAGGATTAGTG
GATTGTTATAATAGTTTATTACCCCCTATGGACCATTATATATGTCGTTT
GACTTTTTACACGCATCTTTAAGAGGTTTGACCACATATCTAAAATTTGT
TTTTTTAAAAATTTCTTTTTCTGAATAAAAATATTTTAAATATTTTTTAT
TCAGAAAAGAAAAATTGCTTAATATTTTTGCTATATGGTCAAAACACCTA
GAGTTGCGCGTAAAAAGTCAAACCACTTATATAATGGACCAGAGGGAGTA
TTATTTTGTTTTAAGTATCAGTGAACATGAGAATTCAAGTACTGGAAGGA
TGATGTTGAGAGACGAGACAACAATTTTACACTTCTATAAATATGGTGTC
TATAACTAAGAGCAAAGAAATATATAACTTTTTCATATTTTGTATGTATG
AAGTCTTACTAAATATGACGATGCCAGGGGAAGGTGAAGTATTTTTATCA
ATATATTGTCTAATCGTATAAATGCTGTTCCTTTATCATTTATTGCAGAA
ACATCCTGGTTCGCCTAAGCAGCACAATGATAAATCAAATGTCAAGCCCC
CTCTTCCATATAATGCTTCACAGTTTAGGAAAGGGACGTATCATGAGTCA
CTGGACTTTGTGCAATCGCTCTGTGATACATCGTATGGTTTAGTAGATGT
ATTTCCTGTTGAAGATCGCAAAAGTGCTCTTTCTGAGGTTGTCATAGTCA
TCTACAATGATAATTACTTGTTTAAGGATAAATAGTCTATATTATTTTTT
TAATACAACAGCAACTTGATGGCTGAATTTTATTTCATGTGTTTCAGTCA
CTTACTGAGATCAATGCGCATATAACTGCTGCTCAAAGTAGTGGAGGTCT
CTCTCTCTCTCTCTCTCTCTCCCCCTCCCTCCCTCCCTCCCTCTCCCCTG
CGTGGGTGTGGGTGTTTCTCTCACACACAAACTCTTTTGCCAAATGTACG
CACAAGCATACAAGTATATTCTCATTTCTTCAAAATTACGTAATAATCTG
TAAGTGTAAGGATTTTGTTTCATGTACAACCAAATATAAATTCTTCTATA
GTATACACCATGAATATTACCTGTTTGGTTTAACTTAAAGAGCCTTTTTA
ACTTTTATTTGTGACTTCTAGGTTATTATCTTTTTAGATAATATATTTGA
TACTGTAATATATAAATGACAAAAAAAACAAAAAACCCAAGACTATCTAA
AGGTACATGTGGTGAAGATAGTACTCATTTTTGTCAAGTCAAATCACAGT
TAAATATATGTAATTTTTGTAAATACTGAAGATTAATAACTGAATGTCTT
TTTGATAACTCGTACATTATGTTGAATAACATCTAATTTTATAGGCCAGT
AATATTCATGTTATAGAAATCATTGTAATAGTAATAATAAATTATATCTG
GCATTTCATTCTCATATATTGTTAATAATATGTTATAGGTGTGTGCTTCC
CTATGGGAAAGGGTATGTACCGTGTTGTTCATATACCTGAAGATGAAGCT
GTTCTTTTAAATTCCAGAGAGAAGGCACCATACCTGATTTGCGTAGAAGT
TCTGAAAAGTGAGACAGTGAGGTAGTATGCAAACTGCAATAACTTCACTG
TAATTGCGAAAGTTTAAGAATTAAATGTATTTGTTATATTAGACAGGCTC
TGTTTTTCTAAAGGGAGGTTTGACCTAAGACATGCTCTCTCTTCCTTTCT
TTTTGTAGCAACACAAAGGATGTAAATAATAGTCAAAAACTTTTTAAAGG
AGGAATCCCTGTAGCAAACGGAGATGCATTTTTGCCGAAGCCTCCTCCAT
GGGCTTATCCATTGGCAGGACAGGACCGTTATGGTGGTTATGATAGGATG
TCAAGATCTGCTTCAGATGCTATTGATCAGGCTATGGCTCAATTATGGGA
TGCAAAAGCTAAAGTTGTTCATCTTGCTCTTTCAGTGGAGAAGCAACAGC
TCAGCCAGTCGACAGAAACCGCAGATCATGATTCTAATTGTGTCATTCAT
CCTTGTGATCAATTTGATTCAGACAAAGAAGGTACAAACTGTGCAGCCAG
AGGTGGTAGTCGTGACTTGGAAAGAGTAAGGGTAGTTCTGACAGCAGATC
CTGGGGTTAGCATGGATGACACGGAGGATCAAGAGCCACCACATCGGAAG
GAACACCGACGTGTTCCAAGTACAATAGCTTTTGAGGAAGTTAAGGTGGG
TAGTGCCACTATACTGTGTCCTTACTGTCAACATATCTGTTTCAGTTTTT
TTTTATCTCCTTGCAAATTTGGCCACCAAATCCTGTCAGCATCTTAATCA
TGTTAAACTGTACGATTCTCATATCTTTGTAAACTTCGATTATTAACTTC
ATAATTTATACAGCTAGTTCTATTTAAGTTACAAGGTAGCCTCTAGCCAG
TAGAATTATATATGGTCCTATGCATTACAAACGCTACTAACACCCAGCAG
CATTACCCAAGGGTCCGTGTGAATTCTGAATTCCTATCTTTCTTTGAGAT
GACTTGGTACATTGTATTTGCTGCATTACATTTTATATCTTGAGTTCTGT
TAGTAGTACCGTACTTATGCACTGGTAAGATAGATATAGCTAGACTTTTC
AAATAATAGAAGCCTAGTGAGGCAACTTAGTGGAGTAGTTGACTAGTCAT
CTTGATCATCTGCACCTGACCTGAATAAAGGACACTGAAGTCTCGGGGCA
CAGTGATTAATTGTACTGTTTTATATTGAAGTTATCACAATGACTTTCTC
TCTAAAAAATCAGTGACCGTATATATATCTAGGTTGTAAACTTTTTGTGC
CTAGGCTATTATATTACAGTGGAAGTTTAATCACTATCAGCTTAACGTTG
CTGTAAATTATCACAGTGACTACAGTTGAAGTAGCACAGGCATCTTGGTG
ACATCATATTAATTGACTTTTGTGGAAAATATAGTAATGGTAGGATATCT
GTATGTATTAAATTTTATTAGAAATGATGATTGGAACTTAGAAGCACTAA
TATTGACATCAAATTTAAGTGCAAAGGCCGGTTCATTTACATTGTCCACC
TATTAGGCGTAGTTACTGCTATGTCCTTCGGATTATCTGGAACGCAGTCC
GAGATAACCGTAATAGGACTGTTGTGCAAGTTATTGTTTTTTATTCTTTA
TTTTAAATGTTCAGCTGGTCACCCATATATGATATGCATATTATAAATGT
TGAACGGGGTTAATACTGTTAAATTTAAGTGAAAAGCTAGAAACGTTTGT
GGACTTGCCAATTAGAGATTGCTCTCTATTTATACTTTCATGATACAGAC
ACTGTTCCAGTAATTTTATTGCCTGTTCACCTTGTTTTCTAGGGAGCTGC
TTATGGTTTAGTTTCCACTTCTCTCTTTGCCTTTCAATTGCTCATTTTGC
TTGTCTTGACAGGCTGCTGCTTTGAAAGGAGAAGCTCCTCTTGGACTTCC
TATAAAAGGCGCTGGTCAAGATTCATCTGACTCCCGATCACATGTGAGCC
TCTACTGAAATTTAAACTGTTCCATTGTTGTTTGAGTGAGGCATGGATTT
TAGTGTGGGGGCAACTTTCCCTTTTAACATTCAAAGTATTTATCTTTGTA
TTATAATATATAGAGATTGTTAACATATTCCCAAAGTCTTATGGCAAGTG
AAATTGAGTTATATCGAATTAATACAACTACTGAAGTGCGGATTGTATAC
TAATTTGATAGATAGGATCAGTTATCTTATTCTACTTGAACCTTTAGGCA
AAATTTGCCTGCACTAGTACAAAGTTCGAGATCTGTCCTTGGTTCAAGCC
ACTGTGTTTATTAAGTTCAAATTATGTTTGAAACAGGTTAGTAATGGTGA
TACGCCAAAAGCAAGCGATGCTTTATCTGGTGAGCTATGGGAAGTAAAGA
AACTGAGAATTCGTAATGCATCAGTACATGGAAAATTACCTGGCTGGGAC
TTGCGCTCTGTAAGTTCTGCATTATTTGGGAACTTCTTAACAGAAGTGCC
AACTATACACATCCATTTAAAGTTATCCATGGAATACAGTGTCTTAGCTA
GACTGCCATGTTAGCAAATTAATTTTATGTACTGATAATTTTCTTATATA
GGTAAGTACGAATGTTGTTTTCTGTGGTTTTAAGATTAGTCCTTTTTGTG
TTTGAGTATGAGATTGTTTGTGCAAAATACCAAATTTTTTTGTGTTTGTT
TTTGTAAATCTGTGGTTAATCTTACATCCCTGTATTCAGTAAATATTTTA
CTTGTCCTTTATCTGCATATCCCTATGTATCTTAAATCATGTCATCTGGT
ACAGTTAGTTCCTTACTAGATGAAGTAATTCTAGTGATCCTTGTCTCTGT
TTTTATGATCAATTTATTTGGACGGATTCAAAGTGGAAGATTACATAAAA
ATCTTAAGCTGCTTTTATGCTATTGCCAGTATCAGGTGCAACTCTTTAGC
ATAAAAATTGAATCCATTTCTTTTACTAGTTAAAGTTTCTGGTCCAGGTG
ACTCATGTCCATTGTACTTTTTTGAGTGTAAATACGTACAGTGTCATGCC
AATCTATATACTGTTTATTACCGGAGTATATTAAGAGTTTAAGACCAAAG
CGATTCCTAGTCTTCCATATGGGAATGATCTTGTGTCTTTTGAGTCAATC
ATCTATAGATTGAATGCTTAAGAATATGCGATTATGTATCTTGTCCAATC
AATCTTTGGGAAGTACTGGAAATGAGAACTTTTAAAGAATAAATTGGTCT
GCGGGTCTTCATAGGTGCAATACTAGTGATTTACTAGCTTGAGTTACTAC
TTCACATTATTGTTTCAGAATGTGCATTCTGTTTGCTGCACAACTAGATA
ACTTTGCTAAGTTTTCACAAATAACAATTTCATTTTCATTTAGCAAACTT
ACTAGTTTTATTTTTCTGTTTCCCCCAGTTAATTGTCAAGAGTGGTGATG
ATTGTAGACAAGAGCATCTTGCAGTGCAACTAATCTCTCACTTTTATGGT
AGGCACTTCACTATCCTTACTGGTCATATAATGTCAGAATTGCTCCATAT
TCATATTGTCTGAATCCTTTAAGCTGGAATAACTACTTCATGGACATTGT
CTGTGTTTTAATGGTAGGCAGTTAAGTCTTCTCGTTAGGTTATATAATGA
ACCAAAATATCTGCATCCATATTCTCTGAATCAGTTATACTGGACTACTT
TTTTGAACAGTAATTGTGCATAGATGTTCCTCGGACATCTCTGTCCCTTC
TGGGGGATAATAGATATAGTGATAAGTTACTTATTACATATCAAGATATA
TCTAATTGCATAGATCACCTGTATTTGTTGGTTGTGGCCCTTAATCTTTC
TGTCTAATATAGTTTTTTTCGAGCTTTTTAAAGGTTACGTGGTGTATAGA
ATCGAATTTCTACACATATGGTGAAATAGTTGAATATTGATTACAGAAAT
ACAATTACGTTTGCAGTATGGAAAGAAGTTCAAATTTGTTCCCTATATTA
GCACAAGAATAGTCGAGTGACCTATAGACACATCTAAGCTCTACATGGAG
CACAATGAAGTTAGCAAGCAACAATATTTTGTGTCGCTAGTCATAACAAG
TTAAAGGAATAACAATATCAGTATCAGACCTGTTGTGTTCCTGTAAAGTC
GAATTGTTATATCAATTAATCCACTTCAGATAGCAGTGTGAGTTCACTTG
CAATATATTCTTTGCATGCAAATATGCAAAGATCGAACTAGGCACTCTTT
GTTTTGGCTTATTTGGGCCGAGTGAGTAGTTTGACAAAAGTACTTCTCTC
GCTTCTCTTTGCAAGTACTGTAGTGAACAAGATGAGGGAATTAACGAGAT
GATCAGTGTGAAGTTTGACTTGGTGCTTCTTGCTTTGGTCGATTTAATTT
GGATTGTTAATGGATTTTTTTTTAAAAGCTAGCTCTGGATTAGGTACATT
AAGTTTCAAAGTTTTGTTGTACTCTTCTTTAAAGGACTGCATTACAGTTC
TTTGTTCTGTTGCCACCCCCTAAATATTTATTTAAAGCTGTAGAATGAGG
AAAAAAGAGAAAGTCAAGCCTTCTTCTGGGAAAAAGGAAAAAGTGAATCT
TATCAAGTCTTCTTTCCTGTGTGAAATTAATGAATATGTTTACTGACTGC
CCACTTGGCTAAGCCTTTTTCCTGACTTGCAAGTCAATAGTGTTTCCTGA
ACTGAAGTTCCTTTCACTATGTTTTCAAACTTGTAAGACAGATAAATGCC
CTTAAGCTCAAAGGGCTCTAATTAACTCACGATTGAATAAGCACAAGACA
TGTTTTGGGAAATAGTTACCAGGTCCTTGTCTCTTCTTTTACTGTTTTAT
TTTATGTCCCACCCCCCATTTCTGTTTTCCCTTGTAAATCAGTATTTTAT
TTTGTTTCTGTTTTATAATCTTTTTTCTTTCTGGGTTCTAATTGGGTTTT
TCTTTTCTCCTGGTACTTTTTTCCATTCTACTTTTCACTCAGATATCTTT
ATGTTTTAGCGATGTATCCTGACGTGTTCTTATTTCTAAATTGTGCATCA
CCCAGCTTTCTGTTGTAATAGATAATAATATAATTGTTACTGCAAAAATT
GAGGAAAGACATTAAAAAAAATTTGCTGAACACCACAATTTCTCTCTCTC
TCTCTCTCTCTGTGAACACCACAATTTCTCTCTCTCTCTCTCTCTCTGTT
TTTTTTTTTTTCCGTAAAATATACATAAACGAAAGGTGAAATAATATATA
TGTTCTGGATAAGACTTTATTATTACTTTAAGTTCTAATGAATGACTACA
TAAAGAGTGCGGTAAAAGGCATCGACTTGATTGTTATATATAAAACTTGG
GGAGTGAAGGATCCTAATTTTAGGTTAAACATATCTTTCATGGGTTGGGT
GTATGAGATTGTTGGTACGCAAGATTATGTTGTCTAACTATCAAGTGCTA
TATGTACTTGGTAATCATTGGATAGTCATATTCCTCATAATCGTTTGAGA
GTTGAGAAAAGGAACTTTTAGAGGAGCAATGGTACTTCTTTATTTTGCAT
TCGGCATGGTGTAAAAGTTCATTGTAGTACTTTTACCTTCGCATATTTAA
TGTAGCAGGCATTTAATAGGTTATTTATCTAATATATTGCCAGATGATTC
TTGAAATTTGATGACTATTTACTTTTTAATATGTATAAAACCAGATATAT
TTCAAGAAGCTGGTCTGCCACTTTGGTTGCGCCCGTATGAAGTGCTAGTT
ACTTCTTCGTACACTGCACTCATTGAAACAATTCCAGACACGGTATTTCT
AGTGTTCAATGTTCACTCTATTAAATTTTTATATTTTTTTGAATACAGTG
TGAAGGTAACATCTACCTTCTTTTTTTTTATAGGCATCACTTCATTCTCT
CAAAAGTAGATACCCCAACATTTCCAGTTTAAGACAGTTCTTTGTCGATA
AGTATCAGGAGAATTCTCCGAACTTTAAGCTTGCCCAGGTAAATGACATA
GAGAAGGAAACCTATCTTGTTATAATATAGGTTTGGTGCACAATTTGTAT
TCTTCTACATCCATCTCAATCTGTTTGCCTGTTATAACATATCTTATTAA
TGTATTGACATTGTTTTTCTTGTTGTCGTTTTGCCTGGCTTATGTCTTCT
GATATACTTTGAATATGTCATCTGGTTTCCATAGGGCATTTTCATATCCT
GTTAAATAGTGAAATTGATGAACTTCATAATCTATTGCTTTTATCTTTCT
TTGTTTCACTATTATTGCCACAAGATAGTTTGAGCTATTTCTGGTATATT
TCGGAATTTTAATTTGTAGTATATGCATTAGTCATTCGGTTTTCTTTTAT
ATCGGAAACTTTTGTTATTACTTTTTGTTTCTGGTTTCAATTATATGCTG
TTTCTTGGTCTTAATACGAGAAGCTTATTGCAGAGAAATTTTGTGGAAAG
CATGGCTGGTTATTCTCTTGTTTGCTACCTGTTGCAGGTAACTTACTCTC
GAATTCCGTCTTTTTTGGAAATGAAAATGTAATTTGAAGTGGCTCTGATG
GTTTTTATTGAATTGGAGCAAAGCATTCATTTGCTAAATAGAACATTTCT
GTACATCTTAAAACATTTTAAAAGCTGCTCTTCAATTTTGCTGTTGGTAT
CTGTAGTTTTCGTTGTGGGATGATACTAACTACACACGTATCTTATACCA
CCTTAATAGTGAAAGTTCATTTACTAGTCTTTTGTTTAGAATTCTATTTT
TAGAAGTGAGAACTAATTGAAAACGGGTAAAGCAAAATATGTATATTCTG
TGTGCACTTATTTCTGCATATCTGTATTTGTACTTTCATATAAAAGACAT
GCTTATCGTGCAGCCAGTATAAGATACGTGTGAATAGCGTAAAAGGATGA
AATGTAAGTGTTTATAATGTAGTATATCTTGTCGTTACAATCTTTTGGTG
ACTTGGAGGAGGATAAGAAATTGGGCGACAGAAGCTAAATTGTTTGTCTC
TATGTCACATACATTTATTTTGTTTGTTTGGGATTCTATTTGTGGAGAAT
AAAACCATTCGAAATAGGGTAGAGCAATTTAAGTGCATGCTGCATACACT
CACTTCTGCATTTCTATTATATTTTGTCGTTACAATCTTTTGGTGACTTC
GAGGAGGATAAGAAATTGGGAGATAGAAGCTAAATTGTTAGTCTCTATGT
CACATACATTTATTTTGTTTGTTTTGGATTCTATTTATAGAGGATAGAAC
TATTCAAAATAGGGCAGAGCAAAATAAGTGCATGCTGTGTACACTCAGAT
CTGCATTTCTAGATTCTCACTTAAGCTTACATAATATTTACTTATTGAGC
AGCCAGTATAAGTATATGAGTGTATAGCCTACAAGGATTTGTAAAAATAT
TATAGTTTAGCGTTGCTATCTTTTGGTGACTTGGAGAAGGTTAAGAAATT
TGGAGATGGAAGTATAATTATTGTTGTCCACCAGATGTGATGAAAGTCCT
TGGATAAAATTGGGCGAGTGCCTTTTCATGCTCTTTTTTATTGTAAATAT
CAAAAGTTAGATCATTCTTGTATATTCTTTTTCAAACTGGGAAGGGGAAA
TCTGTATCTCATAGATTTTTTCTTCTACGCGCACTTAAAATTTATTTTAT
TCTGAATGGTTAACAAAATTGTCTGTTGTACAAGAAGTATTTCGTGATCC
AGCTTTAGCTATGTCTTGTACTTTGAACTTCAAACCCAAATGTAGATAAG
AACGTACATATACTTGCTAAATCTTGTGTATCTTGCATGGAGAATCTGAA
TATAATATACCCGCATGGAGAATCTGAATATAATATACCCTTAATTACTT
AATCTGAATATAATATACCCTTAATTACTTATATCCTATATTTTCAGTCT
ATTGTTACAGTGGAGAGCTTCCCTTATTCAATAGTGTATCCTTTTATTTG
TCACCAAAGAGCAATAACATTTTAGCCTAGGGTAAAGTCGACAGAGTTTT
TTTTTTTTGTGTAAGCAGAAAATTTCCAATGATTTGTCCATCTCAATGAT
TGTTTGTGGTTTAGCTTTACAGATGTAAAATCTAACAAATTTTAGTAAGA
GTCAACAGAGATTACAGATCTAAGGTCATTATAGTGGGTACTTGTGGCAT
CAGGCTGTTTTGAATCCCAAATGCATCGATCATAGTGTTTAGTGGTAGGT
CTTCACTTTCTCTGAGGTCTTGAGGTTCAGGTATGCTCTTTTTTCCCTGA
CATAAAGGAAGAGAACAAAAAATAAATAAAAGCTGCTCCTCAATGTTTTA
GGAACTCTGAGTGATATAGGAGAGTTTGCTCTTGTCTTTTAGTCAAGATG
TCTAGATGTCTTTGATTCGAATCTGCTGTCTGGAAAAATAAATTAAGGAG
ACACTATGCAAGTTCTTTGTTCTCTTAGCTTTAGCGCTATTGTTAATAAT
TGCAATTTTTAGAGGAAGAAGTCTCTTGAGGTTTGCTGCACTTTTGATCT
GATAGTATTATTCAGGGCTGTATTATAACTAAATTTTTGGCTGATTAAGT
ATCACTGTTAGGAAATCAAGCAAGTAAATATTCTAAATTGAAACATCGCG
GATGAAGACACATATCACCAAGTAGGATTTTGTTTAATATCAGCTTGTCG
GGTTTAGGTCATGATTTAAGGATTTGTGGTGCTTGTGTGCATTTCTTTTG
GTACATATAACACAAATCATTAGTTTGACAAGTTATCTTATTCACCTTTT
TTTAGGACTATTTTTTTCTTTCTTTTGCCGTGATAATTAGAAATTTGAGG
ATTTAATGAACTTTTTCTGGATTAACATTCATGCATTGGAAATTACCTCT
TTTCTTTATGATTTTGCTTTGACGTGAAGTAACTAATTATATAATTACTT
TCATAATGTGATGCTTTTTTGTTCTTCTTTTCTTTCTGTGTGTTTTCTTT
GCAAATATTATAGATAGGATTGTTATGTTTTCTTGCGTCATGAAGTTATT
GTTCTTGCCTAGGTCAAGGACAGGCATAATGGAAACCTTTTGTTGGATGA
AGAAGGCCATATTATACACATCGACTTCGGGTTTATGTTGTCCAATTCTC
CTGGAGGTGTTAATTTTGAGAGTGCACCATTTAAGTTAACCCGTGAACTT
CTTGAGGTACCAGCTCATCCACAAGATTTTTTCTTCTAAAAACTGAAGCC
TATAGAAACTCTAACTACTTTGATATTAACTGTGACTATTAACATTGGTG
CTTATGTTAGGTCATGGATTCTGATGCCGAGGGAGTTCCAAGTGAATTTT
TTGATTATTTCAAGGTAAATTAGAGTATATTGTCTCCTTCATAGTGTATA
ATGCAGTATTGTTGGACTTGCAACAATTTTTTGTGTTGATAGAGACACAA
TTTCAAAAGATGCCTAAACATAATTTATTGATTTTCACACTAGAGTGTTA
TAATATCTATCAGACGAGAAGAAGTTTAGTGAACGTTTGCTGACGATCAT
AATTTTACCGTCCTGGCTCTTTAAGTGAAAAGTAAAGGCATGTTGCTTAT
AATACTAATTTAACAAGTGAAAAGTAGATTGTTTTATGTGAAGTAAGGTT
GTGTAGAACCTTCAGCCAAGTCATGTACGAACATGGCTGAAGGTTCTACA
CAACCTTACATCACATAAAACAATCTACGTACAGTATATATTTGTGTGCA
TTTATATATATATATATATATATATATCAGTAGTGAACTAGTAATTTGAG
TAACCTAGGAACTCTCTAAGAGTTTTATATCAAAAAAGATGCTTAAGTGA
GACTACGGCATAAAAATAGGTACACTACCTGTTAAACACACCCATGTAAA
CCTAAACATTTGGACACGTAAAGTGAGATATATGATCTGTTTATAAAATA
TAATGTAGAAAAATGCAGAATATACAAAAATATTTGAGATTTTAATTTTG
TTGGGTACTATATTTTTTGTTATTTATATAATTTTTGTGTTTTGGGTGTT
TTTTTAATTTTTTTGCTAAATACTTATAGTACTCTAATATATGTTTTTTA
TGTTTAATATTCTATAATTTATACAAGACACTTGTTGGTGTATACAATTA
TATTTTATTTATTTATTATTTTACATTCTCTTAGAATTTTTATTTTAAAA
AACTAATAAGAATACAAAAATATTTTAATAATCATATACTAGATAAAAAA
GTACAGAACACAGAACATAGAAATACAGGACATGTTATAATTTGTTTGTG
TCCTGTATTTTTTTTAAATACAAATAACTTATGAAAAAGTTATAATAAAA
TAAAAAATGAAAAAAAGGGAGTATAGAACTCATTTTAGTAATTATATATT
TAATCTTAGTTATACATGTTCTGTATTTCTTCTGCTAAAAAATAGTCATG
CATTAGAGCAGTTGTAACAGCAGTCGTGTTACAGACACGTGCACGGCTCA
GATCATAGTTCCTAGGTTACTCAATATAATTAGTTCCTCAATGAACTACA
CCATATATATATATATATATATATATAGGTAGGTATGCATGTATATGTAC
TTGTATATGCATCATTAGGCTGTGTTTGGAGTACAGTAATTCAAAGGATT
AGGATTTCTTGTCTATTTATAACATTCACGAAAGAATCAACAAAATGAAA
GTTGAATAAATACATTTTTGTATGTAGATACACGAGGATTTCATTTTTAA
TTCATCTAAAATGTAAATTACAGTAATTAGCTGTTATTGCAGTTGATTAG
TACTTCAGCAAAGAAACCTTGTGCAATTTCTTGGCTAAAGTTAATGTTGC
AAAAACTTATTAAAGGAACTTTGACTAATGATTCAAGAGTCTTTGGAAAT
TGGAATGTAAGATTTGTATCATCGACTTCTAAATTACAGATATCAGATGA
AATTTTTCTACCTAGTAAAAGTTATACACAGGAGCGTATGTCATGGTACA
AATGTTGATCGGAGGAACAAATATAATACAGCGATCTAGTGTAAATTTCG
CCGATGAAAGTGATTACAAATATCCAAAGAAGACTTGTTTTTAACTTGTA
AAAACTTGGGAGTTCTTCAAAATTTGAGAAGTGAGCGAGAGGGAGTGAGG
GGGAAAACATTGCAACTAATTTTTAGGTTTGTGTATTAAACCACCCGCTA
TGCTCAGGTTTTAGGTTCCCACGTTATGTAGGTAGGTATCTTGCATTCAT
GGACAAAATATTCTGTAACAATAAGTTATGAAACAGTTGATAAACAAAAA
GGAGCCAAGCATTAGTGTGGTTGGGAGGTCCGTTGTCACCCTAAACATTG
CCTCTAGATGATTAGATGTAAATTTTGATTGTTGATTCCTCGTGGGATTA
GGTTAGGTGATATCTTAGTTCCTTTTACTCATATGTCATTATTATCTTTT
CCATAATAATATTTGAATTTTACTCTTATCGTGGTGCAAAAATATAGAAT
GGAAAGCTTAAGATCGATGTCTGTGAGTGATTAGGTAGAAGCTACCAGCA
TTCTTATGTCCTGGTTGCTCATACAATCCTTTTTATCCTATGCTTTCAGG
TTTTATGTATTCAAGGCTTTTTAACTTGTCGGAAGCATGCTGAACGCGTA
ATTCTTCTTGTTGAGATGTTGCAGGTATATTCAGCTTATAATCTTATTGT
CTAGACTTGCTGTAACATATATAAGGGATAATGCTTGTATGTCTTGTTGA
AGTAGCTAATAATTGGAGTTTGGAAATTAGATTGATCTATGGTGCTCAGT
AATTTGGTTGGAAGTAGCACATTATGATTTTGTATATAACATTTACTTAT
TCATCTATTTCCCATTATATTGTCGAAATTTTGAATATTCCATGTGGATA
GATGTGGTTTATCATTATTTTTTTATTTTCATTTGGTGATTCTGGTCAAC
CATTTGTTGGTTTCTCATTGTTTGAGAGACCGGTTGTCTGTGGTGAGCTT
ACCCAAGCGTATTTGCTTAATTGTATCTGACTGAATTTCTCTCAAGTCAT
TGGTCCTTATGCTCGTTTTACTGCACCTATATACATGTACAGTCTACACT
TGCTTTTCTCTAAATGTAATTCCAAAGACATCAATGGCTGTTTTTTCTTG
CTGGGTTATTGATTTAGGATAAAACTAACAGTATGATAATTGTGAAGTAA
TGTAAAACTACCAGTTTCACATGTAGGTATAGGAATAAAAATCAATCAAG
CTTTACATTGTTGTACATAGATTTTGGGTATAGGGTTTAGATATCCAAGT
AAAAGTCGACGTTCCTTGTTTTTTTAAAAACAGAAGTGTATAACTGTTGT
CATGGCCGAGACTCTGGAGTTTGGCATACCTACTCAAATAAAAGAAATTG
AGGAATCTAACCCATGGCAAAACTTAAGTCCACTGGAAAGCTTTTAATTT
GATTTGTGATTAATGTACAATTTAGAAGTTGAGACATCCCATGGTTATGT
TTTCATTGTTGAAACCAGATCATATAATCAGAGAGCAAAAGACTGTTGAA
GTTGGCTATATAAGCTTCTGACCATTAAATGCTCAAAAATTAACTTGAGG
CGTTTAATCCTGTAGGTGTGGTTAGGCTTATCTTAGAATACTAACTTTGT
GTTTGGTAAGAGTGAATTAAATTGGAGGCGTGATGTGAAGTTCGTACTAA
TTTATGTGTAAACATTCTTAATTTTCATTCCTTCACTCATTCCTACTTAT
ACTAGAACTCAAAGTCTCAAACCCTTAATTTGAGGGATGGTTCATTCTGC
ATCCTACTAATTTGTTTCATAAATCTCATCATTGAAAACTCGCACTTTAT
CATCTTTTGCCACATTTCCCTAGCATATTCATATTTTTTCGTTAATTTTG
TTAATATATTTTCATGTCTTTTCCTTCCATTCTCCCCAACCGGGTCATGT
TCAAAAGAGAACCATTAGAGAGAGAACCCATAGAACCCTTACCTTATTTC
TAGTATTTAGGGTTCTGCAGCAGAACTTCACATGCAAAAAATGTCAATAT
CTATGTATTATATTTCAAAATTATTTTTGAACAACACAACGATGAAAAAA
TATGAAAAAAACATGTATTTAGATTTAGATCCTAAAAATCTATTTAAAAT
TTAGGGTTCTGCAGCAGAACCTTAGTGGTTCTATGGTTCTATTTTAAGGA
CTGGTTTTCTCTTGAGCGCCACCCCTCCCCAACCATATGGAGAACAAGAA
CTTGGACAATTAAACCTTTGGCAGTTTACTAGTAATTTTAAGTTTCCCTA
AAATCATATAATAATATGAATCAGCCATTGTAACAATAACGAGTTTTTGG
ACCGATCACTTTTTTATTATGTTTCGACTAACAATCTTGAATCAAGAGTA
CTTATTAATTATGTTTTATACACTTGTCTCATCCTTGAATCAGGATTCTG
GTTTCCCGTGTTTTAAAGGTGGACCTCGGGCAATACAGAATTTAAGGAAA
AGATTTCATCTAAGTTTAACCGAAGAGGTTAGTATAAAATCGTAATATAT
TAAACTGATTTCTCTTGTATATTTGTGCTTTATTACAATCATACAATGTG
GAGATTCTGGTGTTGACGTGTAAAAAACATTCTGGTGTTGACTTGTAAAA
GTTTTTTTTTCCTGGCAGCAATGTGTGTCGTTGGTGCTTTCTCTCATCAG
CAGCAGCTTAGATGCTTGGCGGACACGTCAATATGATTACTATCAGAGGG
TGTTGAATGGAATTTTATGATGTAGATCTCACTGCTATGTTCTCAATTCT
CATGATGAGCAGTCAGTAAGATGAAGCACTGTGAAGAACCAACTACGTCT
GTGAATCGTATTGTGATGGGGAGCAGTTGATTCATTTAGTGATGGGCTAT
AGAGGTTTTGTTTGGACATCTGATAGCAGTTTGTGCCCTGCAATGGATCA
ATGTCAGAGCTCTATTATGGCTATATCCATCAGCATGAGTAATTTTCTTT
TGCACCAATTTTTGAATTATCATTTTGTTTCAAGGAATATGGACTGCGCT
GTCTAGAAGAAAATATATCAATTATGAAGCTGCAACGATATTATTCTTCG
TATTCATGTTGGCCAGCCGGGACATAGTGTACAGGATTATGGAAATCAGC
AAATTCTCTAGAAATGAGATTGTTATCAGGACCATACTCTCAAAGTTTTT
ACGCATTTGCGCAAAGAATCGGATTCCGCGCAATAGTCAGCTTGTACAAT
CCACTTCGTTCTATTTTCTGTGTCGAGGTCATTAACATATTAGTAGCCAT
TGGAAAAGGCAAGCAGATTCTTGTTGATAACACCACCGAAGATATGCCAT
TTAAGCTTTCTTCCAGATTCTGCAGTCGTCGGCAGAGACGCAAATTTGCA
ACATAGGACGATTTCTGTGTAATATCTTGTTCATTAAGTTGGTTTTAAGG
GTCTTTCTTTTTTCTTCCCCATTTGATGAGTGCATACTTGTTTCATATTA
CAATCTTTTGCAACTTGATATGGAAAGTTAAGTGAGTTTGGTGTCCTACA
GTGTAGAGCCTTTTTAGCATTGTCCACAGATTTCAGGCGCAGAATGTACA
TTACTGTAATCTTTTACTTGAAACCAATTTTGATACAGGGTTTAAACTAT
TGCACGTTTCTCGCA
Sequence Length:
18915
Sequence Checksum:
f563b8b92b7bf5e904b8d9961ea431db
View location in JBrowse:
Gene:
LOC108218589
Gene Biotype:
protein_coding
Gbkey:
Gene