Resource Type:
Gene
Organism:
Name:
LOC108223027
Identifier:
LOC108223027
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017397068.1, is a part of gene, LOC108223027. |
| The genetic_marker, MK004761 K2205, is located in gene, LOC108223027. |
| The genetic_marker, MK011197 5_8464411, is located in gene, LOC108223027. |
| The mRNA, XM_017397069.1, is a part of gene, LOC108223027. |
| The mRNA, XM_017397072.1, is a part of gene, LOC108223027. |
| The mRNA, XM_017397070.1, is a part of gene, LOC108223027. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017397068.1 | XM_017397068.1 | mRNA | DCARv2_Chr5:8451663..8469483 |
| XM_017397069.1 | XM_017397069.1 | mRNA | DCARv2_Chr5:8451663..8469483 |
| XM_017397072.1 | XM_017397072.1 | mRNA | DCARv2_Chr5:8451663..8469483 |
| XM_017397070.1 | XM_017397070.1 | mRNA | DCARv2_Chr5:8451663..8469483 |
Sequence:
GGCAGGTAGACTGAAACAGGGTCCATGGGTGCAAACGGGTCGGAAAAGTA
CCCAACAGAGCTTCACAAATTCAACACCTAAACTAAACCCCCAAATTACC
AATTTCAACATAGCCTAACTACTATTGGAGTTAAATTATACATACACACA
CATCTATATATAAATTAGCTAGGGTTTTGAATGATAAACTCTTTTGATTT
GATCTACAATGGGCGCTAGCAGAAAATTACAAGGCGAGATCGATCGAGTT
CTGAAGAAGGTTCAAGAAGGCGTCGATGTATTCGATAGCATTTGGAACAA
GGTTCGTCTTAATTCGATGTTTTATCACTTGTGTGTGTGTGTGTTTACTT
CACTGATGTATGTTTACTGTTGTGTGTGTAGGTGTATGATACTGATAATG
CGAATCAGAAGGAAAAGTTCGAGGCGGACTTGAAGAAGGAAATTAAGAAG
CTCCAGAGGTATAGAGACCAGATCAAGACATGGATTCAATCCAGTGAGAT
TAAGGATAAGAAGGTTGGTCTTCTCGGTTGTATTTACGAGTCAGTTATGC
GTTTTGAAGTAAAGCGTTTATAAGGTCACTGTGTCTTCTCTATAGGAAAT
TTGATTACGGAGAAGTGGGAAACGTTAATTAGTGCACACAATTGTAGTAT
GAAATGTTCTATATTTTTATAGGGTGTGTCCTTAAACACATTTGAGTGGT
ACGTTGGATGTTTTTATGTACAAAATGTTGATGTCAATTGTATTATGTGA
ACTTAAGTACTTGTTTATAAAATTTGTCCTTGTTTAATATTGCCAAGGCC
CAAGCAAAGAACCACGAATCTCCACTATAACCTAGAAGTAAATTTTTTTA
TATAACACTAACTGGTGGCATTTACACCACTAAATTCTTATCAGCTACAA
TCCTTGGCGATATGAAATTGCCCAGTCAATTTAAATACTTTGTGGTGAAG
TGAGCAAGTGTTAGGAGATGGTTTTAAGATTTATGTAAAACACTCAGTAT
AGGGAAGGGGAGTCTTCTTATGTTGAAATCAAGATTTATGCTGGTGAAAT
TGCCCAGTCAATGTAAATACTTTGTTGGTGAAGTGGGCAAGTGTTGCAAG
ATAGTTCGAAGATTTTTGTAATGCACTCAGTATAGGGAAGGGGAGTCTGC
CTATGTTGAAATCAAGATTTTTATATTATATTAGTATTTCAGCAGGCAAG
AAAAATCACCAAAAGTAGAATACAGCTAATGTGAATATATGGTGGCTGCG
GGCATATGAATAACTATGTATATACTGATTCAAGCAACTTCAAAAGTTCC
AAAAGTTGAACTTTTGCACGAGATCATTGCAGTGCGTAAACAAACTCCAG
AATATAGACATGGTTGTTAATTATCTTAGAATTAAGTAGTTTCACTGAGC
CAAATAAGAGTAATAACAAAATGAAGTCAATTAACATCATCAGGGACACA
GATACAAATTCTATTCCTTTCCTTACAGTTTGAACAACAAGTTTTTTGTT
AACTTAAGATCTCCACCCACAAACAAATAGGCATCTTCATTTTCCTTGTT
CAACATTATCCTGTTGAGTAATTTTTCATACTTATAACCTGGGTTTTGAT
TAAGAATTTCAAGCAAGATCTGATCTTAGTTATATAATTAAATAATTTAT
ATATATTTTATGTTGCTTGGAATCCTAGATATTAATCTAGATGATGGTCA
GCTTAGATTGATCTAGAGATTTGAAATTAGAGCAAAGTTGATGCGCTTTA
CAATTAGAAGATGAACTAAAATTGTAATACATGTCGGTCTTTTTTCATGG
TGTTTGAAAATGAAAGAGAAACATGCATGTGTAGAAACTTGGAATTTTCG
TTTAGTCTATACCAGGATGCTTGGTTAGACCAATTTAAGCCTTGCTGGAG
TACTACACACACACATATGTATATCTTTACAATATTATCAAAAACTAAAC
ATGCAAAAGTTAGGTCGGTTTGTAGTCCAATACAGTGCATTATAACTGTT
AGATCACTTAGTCAAATTGATTGGAACCGTTAGATAATATTCTATATATT
ACTATCAATGCTACTAAAGGTCAAAGGTTCAAATCCCATCAACAACATAT
TAAAATATTTATACTATAATATTTATCTAAAATATTACTCCCTCCGTCCC
AATTTATCTGTCTTGTTTGACTTTTTGTGGTCAAATTGACCAAACTTTGA
CCAGTAATTAGTAATTATTCTTACATGATCTTGAAAATCGAAAAATTTAC
ACTTTAAAGTAGAATAGATGTAGATTCTAGTAAAATATTTTTCATAATTT
TTTTCTAATTATTTTATATATGTAAATTTTAGTCAAAGTTTGGTCAATTT
GACCATAAAAAATAAAACAAGACAAATAAATTGGTAAGGAGGGAGTAATA
AATAAGGTTCGAATCCCACAAACAATATATAAAAATTATATGTATATATA
TAATATACATATATATATACACACACTATACAATATTTACTTTAAATTTA
CAAACAAAGTACATTAATATGTTATATTTTAATTTAATTAAAGTTATAAT
TTATTATTAAAATTAGATTCATTAAAATTATTAAAATACACACACACACA
TTCCTGATTTTTCTTAATTAGTTAGTTAGTAGCTTTAGTAATAATTTATA
AGTACAAAACAAATATTTTAGTAAAAGAAGTGGAGTCAAATGTTCCTTAG
TTTGTATGTATTAAGGGTTCTAATACTGTAGAATGAATTAATTATGTGTG
CAACCTTTTCTTTTCTTATATGCATTATTGTAAGTACAATATATACATGT
CTGTTTATGTTAACATCTAGCATTTGTTTACGGAGTATTAACATTTTCTC
GTGTTATTAAGCTTAGTTTGTAATAAGATTTTGTTCTATTTTAATGTCTA
CTTTGTTCTCAAGTTAATAATAAGTTTTTTTTGACACATGTTGACGTAGG
TTAGTGCCTCTTATGAGCAGGCTCTGATGGATGCACGAAAACTTATTGAG
CGTGAGATGGAAAGATTTAAGATATGTGAAAAGGAAACAAAAACTAAAGC
GTTCTCTAAGGAAGGTCTTGGTCAACAGCCTAAAACAGTATGCACTGCTA
CTTCCTCTCATTTATCTTTGTTATAATATTTTATTTAGGATATTGTCTAA
TAACTGATTGTACTATATGAAATTTACTTTTCTCTTATGGTGAAAAATCA
AAATGTGTAATAAGTATGTTTTGGTCTCTGCGCTGACTGGATACAAATAT
GACTATGGTCTTCTGATAGGACCCAAAGGAGAAGGCTAAATCCGAAACAA
GGGATTGGTTAAACAACGTGGTATGGTACTTGATTTTGCGCAACTCACAT
AAAAATTCTTATATGTGCTGCTTTTAAGAAAAAAATATGGTTTAAAGAAT
GTAGTTTGTACATCACTAGTCCAGTTTCATGGAAGTTGAAATTTTTTATG
GTGCACTGAACTTGTGTTTATTAAGTAATACAACAGATTCTATGTCATCA
AGCGTAGGTTTCAGAGTTGGAATCCCAAATTGATAGCTTTGAAGCTGAGA
TGGAGGGGCTGACCGTTAAAAAAGGGAAAACCAGGCCACCTAGATTGGTA
CACATTAGGATGTCCTTTGTCTTTGAGATTTTCTTTTTGCACTTAGTTAA
ATTTTTTACTTCTGATGGATGATATTCACTTCAGACACATTTGGAAGCTT
CTATAACTCGACACAAAGCTCATATCATGAAGTTAGAATTGATCCTTAGG
CTCTTGGATAATGATGAACTGAGTCCTGATCAGGTCAATGATGTCAAGGA
TTTCTTGGATGACTATGTGGAACGTAATCAGGTATATGATGCTAGCCTTC
TTCTTTCTTCTTTTTTCGTTAAGTAAGCCTTCTACTATCTTCCCTTGCAT
CACATTGTTGTGATTCGAATATTGTACTTCCCTACTATCTTTATCATTTG
CAAAGCATCATTAGAACATTGGAGTGTGCAGATCTAGCTTTATTTAATTT
GAAGGACATAAATTGAATTCTGTTGGAAGCACTAAAAAGCTGATTATTCT
TTTATGCACTTAATTTCAGGAGGACTTTGAAGAGTTCAATGATGTTGATG
AACTTTACATTTCTTTACCACTGGAAAAGGTGGAATCTCTTGAAGATCTG
GTCACGATACCCCCTGGCCTTGTCAAGGTATATTATATGAGCTACAAAAC
ATTGTTTAATAGTATTATGTCTGTTCTGTTACTGAGCGACTTTGGTTTGT
CTTTGTCTACTCATAGGGTTAAAACACACGTGCATGTTTCTGAGAATAAA
GATTCTTTTTAACCTTATAGAGTGTCCAATCTTTTTTTAAGAATAAAGAT
TCCTTTTTAACCTTATAACAAGAGGGAGACTAAAATAGCACTACTAGGCT
ATTTGCAACAACAATATGTAGACTGATGTCAATTTACCGAAAAGTTGAAG
AGGTGTTATTGTTCATGGGTGCTGATTATGAAGTGAAAGTTCATCATTTT
TTCTAAAAGCACTTAGAATGACAATTATATTTCCCACTTTTAGACCCCCA
TCCATTATAAGTATTTATTAATCATTTAATCTTGCGAGACCTTGCTTTTG
CTGCCATATAAGTGTGCAAGTCTTTGGATATCATTCACTTTGCTTGGGTG
TCATTGCCAAGCTCTTGTGGCTTTGCTAGATCTAACTTTAAATCTTCTCC
CTGGGTGATGCTTACACTCGCATTCACTTTGTAGCTTGTTTGTAATGTCA
ACATGTAGGGGGAAACTAACAACACAGTGTTTCCAACACACAAATTCAAA
ATTTGATTTAACTCACATATTTTCTTTGTTTTGGTTATTAGTTCCGTTAC
ATAACTTGCTAAGAGAATTTTCTTTTCCCCGAGAACATTTTATAGAAATT
TTTTACCCTCATATTTGGAGCATCTACTCTAACACAATTTAGAGGGTTCA
ACAAGCAATTAATCACACGATGAAGGCTGTAATACTCTTTGTAGTAGCAG
TGCATAGATATATACATGTTTGCTTTGTTTTGTTTATGTGTTCAGTGACA
AAAGATTTTGACTGATTAAGAGACAGGATAGCAACATATGTGTTTTAGTG
GCTCTTTTAGCCTAGTAGGTGTTATGGGCTTGTTGTGAAACGTTCTGTGT
TGTGGAACTTCTGTAATTATTTGGCATATGGTTTCGCTCAAGTTTCTTTT
TTCCTTTCTACAGGTAACTACACTCACAAGAACATAAACACACACCTTCG
TTCCTATGTAAATGTCCCTCTGGAAAAAGATTTAGCGAGTTTAGCAATGT
TTACTCTAATACACACACACACACACACAAAGACACACACACACACATAT
ATATAAATATATGATCCGGTTCACATGGAACCAAATTATTCTTAGAACTT
AGACTTGCTATAAACCATTAGATCTAAAATGTGTGGCTGAGATTGTAATT
AGTATTTAATTATATACTCTATATCTACTTATATGTTATGTATGTGTATA
CTTATAGAAACACAATAAACAATGGTTTACAGCTAACTTAAATACTTTCT
ATAATTAATTCAATTTTTCATTATTATTTATTAACTACATTCACATGATA
AAATAGTACGATAAATTATATTTCATAAATATTAATGCATAACACAATTT
AAATTATATTATTACAAAACATGTTTTGTAGAAATACGGCTGTAGAATAT
TTTTTATTTCAAAAGGTAAAATATCATTATATAAAATATAAAATATTACT
GTAGTATATTATTTATATTTATTATTCGTTAACAGGCATAAAAAATAACA
TATATTGTTATAGTACGTTATATATTATAGATAATTTAATTAAATTATTA
AATTGATACTGCTACAGAACTTGAATTGGTTAGCTATGAAAGATAATTTA
TGATTATATTATTTTTATGGTGAAATATAACTTGCACATTAATTGTCATA
ATTATGATTAATATACAACTCATTATTTCTATATTTAAATGATCGTCATA
TCAATGACCATTCATTTTATCTTAGTCTATTGGATATGTATATGGTCTAA
GTTCTAACGTGTGTGTGTATATATATATATATATAGGGATAGGATCAAAT
AAAACTTTTTTAAGTTACAAACTTACAAACTTTTTTTTATTCTCCCGTCG
TGTTGATTCTTAGTTATAGAAAGTATCTGCATTGAAATTTTTTGAAAAAA
ACATCACAATTTTTAAAAATATCGCATAAATAAATCGCCCTTTCAACTGG
TGTTCAACATCGGGTGTAGAACACTAATTATCATTATGTTGAATATATCT
ATAAAGATGTTTAAATTATACCTTTGGGGTGGGGGTAGGGTCTAGAATCA
TAAATATTAGTTATATAATACGTTTAACTAAGTTCTTACATTGAAAAATT
AGTTTATGTACTTGTCCAACACAAATTTTAATCGATTTTCAACAAAATAT
GTTAAAAAAATGTTGAACTCAAATTATATATGTGCTGAACGCATAAAGTT
TGTAAGTTTGTATAAGAACCCGCCCATATATATATATATATATATATATA
TATATATATATATATATATAAGAATTGAGTATAAGAATACAATATTTAGA
AAATGATGTTGGATCATGCAACAGACACTACTGTTCTCATGTTCTCATTT
ATAACCTGTTTTCCACTGAACATGATCATATATATATGTACACACACACA
CACACATTATACAGGCCATTGCTCGAATAATGAGCAGTAAAGAATTTATC
TAATATTTGATTTGGTTCTAATCTTAAGCCAATTAACCTTTCATTATGAA
TAATAATAGTATCTATTATGGTTCAACAATAGCACAATTCTATGTAATTT
ACACACACACACACACATATGATTCTATTTGGATTTTATGCAAGATTTAA
TAACATTTGATTTTTTATAATTTGGATGAGATCCGATATGTTAGCTCAAT
TGTTGTTTAACTTTGTGACTCTATTATTAACAAATTAATTATTCTTTATG
AAAGATGAAATGTTGTGATAGTGTTCTCTCTAAAGTGTTCTTTATGGAGT
GCAACCAAAGTACTTTTTCATGAGCTTTTCGAAATTGAAGACATTTATTT
AAAAAAGGCTTTATTTTGTCTTCAGACATTTTTTGAGTATGCCAGTTAGA
TGGTACATGTATTTATGGAAGTGCTGACTTATCTTTTTAATTGTCATTTT
ACACATCGCCAATGTGTTGCATATAAATCCTTGAGTTGTCATGGTCTCAT
GGATACTTTTGTTTGTATTTGTATATATATAAACAACAAGATGATACGGA
CATAAACACTGAGTTTGCTTGATACTAAACGCCAATTATCTGTCTGCAAT
CGTGTGGAACATGCATTGAACATGTTCCACTTGTAAGTCTAGATGCTCTT
ATAAAAGAGTAGTTTTATTTTTCTGTTTCCGCAGGGTGTTGGTGCAACCA
GTGCAATTTTAAGTTTGAAACCCTCTCTGACAACATCTTCAGCTCAACTG
CCGGTATGTTATCTCTCAGTATACAGACTAGATGGTATAACTTGGAGGTG
ATTGTTTCAGTTAGAGAAGCTTGTTGGAGATTTCCTTAATTAGGACTTTC
CGTCCTTTCAATTTGTAGATCATATAGTAAAAGGGTATATCTGCCACGAC
AAGTATATCATAAGTTTTAAAACTGTTATTCCAGTGGCATATGCTTTGAG
CATGAATGCTTGATATATGAGAGATTATTTCTGGGCTTTCCCCTATAGAG
CTTCTAATGATGGGGCATGTATAACTTAAATGTGAACCATATTAATAATC
TTTAAATTCTGACACATGTTTCCACATTCGAATCATCTTTGTTATAATTG
GTCTAAGGCCGGTTTTATGTCGCCCCCAACTTGCCGCATGGGAAAGTGCT
GTGGGGAAAAATGATAAGTGTTTGGGATATAGATAATAAACAGTTTAGTT
TGAAGCTTTTTTTTTCTTTTTTAAATTAAGTTGAGGATTAAGGTCATATT
TATCCAACATATTAATACAGCTTTTCTCTTAATTTGTGAAAGCCTTTTTC
TTCAAAATTAATCTAACAGTCGCTTTCCCAGCTTATATGCAAAGCAAGTG
TAGTGTTACATACTTGAAAAAGTACCTTTTGGGTTTGGAAAGCAATGCCA
GATAGGCTCTTATTGTGTTGTTCTATTACATAATGTGTCGAGGCAGGAAT
ATGAACAATAGCTGCAACATATTTAATTTGCATGAATATGGTTAAGTTAA
AAATTGAATAGGCGAGTTGAGTCTTCGGAGATTTCTTCCATCTATGTCTG
TGTGTGTTATCGAACAGCAGCCCCAGNCTTATTCTTTTAAATTCTTTGAT
CTGCAATGGAACAACTTTTGGTAGGATGCCCTATAATAATGTGGTTCTCT
GTAAGTATCTAAGTTTTATATCTTTAACTAATAATTTTGGTTATAGTTCT
GGTCATCTGAATATGCAGCTGTACTTGAATTTTATGTAGAATTTGTGATT
CCTTGCTATATATTTTGATAAATCTCTAATCTGTACTGCAATTTGGAGGT
TGCTACCCGTGACTTGCTCTAATTACTACTGATTGATCTAGTGTATAGTC
TTTCGTCTGTTACTTAGTGAGCAAATTACTTTAATTAATGTAGTGCCCGT
CTAGAATATATGTATGAACCAACCAGACTATAAGCTATTCCCACTCTTTC
AGGAAGCTTGTATTTCTGGGATATCTTTGTCTCTCGTCTTTTTTGGATGG
AGAGATTTTATATTCTTCGAAATTTTACATGGTATTCTACATTATTTGTA
TCGCCAGAGGATACTGATTAATGGATGAAAACCTCATATATGATAGTTTA
TCTTGGCATCTATTTTGGAAAAGAAGCCATATAGTGGTGATAGTTCATGT
TTGCTTCTGATAACAGAGACATAGTTTATTACTAATTTTAAGAGGTTCGA
CACCTGATAAGTCTGCCAATGCCGGCCAATTCTTTGACCATAATTATATG
GTGAGCCAAGGTGCAATAAACATTTGGGGTATGTCAGTGGATCAAAGAGT
TCCACAATGAAAAATGTTGTGTGTTTTAGAGGACAATAACTGCTAGGTTC
ACAATCCAAATATGTTCATATTGCATGTTGGCTTGTATTAGTATTCTCTT
CAGTCTTGTTTATCTGTTCTGAATATTTTACATGCATTGTTAACTGTGTG
GTGCATGCTTTTACAGGCTGCTCTGACATCTACAGACCAGCCGAGTTCTT
CTGTCCTTGAGCAAGTTGAAGAGACTGTTTTCCAAGACAGTACTTCAGAT
GTTCCAAAAACTCCATCTTCTAAAAGTACTGCTGTTGGTGCTTCTGCTCC
AACACCACCAACAGGTAGCCATACGACTGGCATTCCAAATAACACTGCTC
ATATCTTACCTGGCATGTCTACTGCTTCAGCAATACAGTCAGGTCCAAGT
CCTGCTAAGGGGATGTTGGAAATTGCTTCTGCTGTTGTTTCTTCGGCTCC
AGTAAGTATATCTGTTTCTACCAAGGAAGAAGAATTTACTGGTTCTCCTG
GTCGCAAATCATCCCCTGCTCTTTCCGAAACTGGTTTAAGAGGTGTTGGT
AGAGGTAGCCTGTCCAGTCCACTATCAACTGCTAATCCTCCAAGTTCTGG
CAGTACTATTCCTAACAATGGAGCCTTTGGTGCATTAACTCCTGCCTCCG
AAATTGCAAAGAGAAATATGGTAGGTGCTGATGAGAGACTTGCCGGTACT
GGTATAGTGCAGCCATTGGACTCCCCTCTGAGTAATAGAATTATGTTGTC
GCACGCTGCTAAAGCTTTCGATGGAATTAACATGACTGAGAATGGGAATC
TTGGTGAAGCTGCAGGTATTTCCCCCAGGATTTTCTCTCCTGGGATGCAA
TGGAGGCCTGGAAGTTCCTTTCAAAACCAAAATGAAGTGGTATGTGTCGC
CTTTATTTATCATTCTAATTTTATGCTTTTAGCCCATCATCTGGTAACTG
CTTTGAAAATGTGCCATCTTATAGTCTGGTTTCTGAAAGGAACTTTAGGA
TTCTAATGATGTATAAATTTAGTGACAGTGTTGGTAAATGTATAAATGAT
GTATATGTTTCATAAATTCTTAAGCTTCTTTCATAATTTGGTGTACTGAT
AGGTCTGCTTGAGGACATTGTTTTTAGCTTTGGCCAATGTACCATTGCTA
TATTCTAATGCTGCAGTTATTCATTGTTGTGAAACTATGTATTTGCATTT
TCAGGGGCAGCTTCGTGGAAGAACTGAAATTGCACCTGACCAGAGGGAGA
AGTTTTTACAGCGTCTCCAACAGGTACAACAAGGTCAAAGTACTATGCTG
GGCATGCCTCCCCTTGCTGGTGAAAATCACAAGCAATTTTCATCACAGCA
ACACAATTCGCTCCTACAGCAGGTAATTTTATATTTAATATCATATAAAT
TGGTGCTGATGTCTATGTATCTCATAGTTGCCCAATTGTGAATTGTGTTG
GGAATCTGAAATTTTGAGTTGCAAAAAATAATTTTACAGATACATCTTTC
TTTGTTATGGGTAATTGGGTATCTATATTATTGGACAGTCGTATACTTGC
GTAATGGCGTATGTATCAACTTAGTCCAGTATATCTATTGAAAACTCTAC
ATGGATGAAAGCTAAGTAAGATCTAGTTCTAATAGTAATATGGAGTTGGA
AGTGAGGATTAATAACTTCTAAATTTAGGTGACATGGAACAAAATGTGGA
GGGATTTATTAGAAGAGACATGACTCATGAGTACTCTTTTAGGGTTTCCA
AAGTAGAACAGGTTGTCACTTTTAGAAGTTGGACATAGTTTAGTGTTTTT
TTAAGATGTTGCTAGTCTGTTTTGAACTTGATGTTAAATCTTTGTAAGTA
GTCGTAACTGAGCTAGAATCCTATATCCCAATACATAGTATGGTGAGAAT
TGCGGTTTGAACCTTAATTGATGGTTGTTTCTGTGACTTCTAGTTGCATT
CCTGCATGTGATATGTAAACTTCGTTTTCGTTCTTGTATCATAAATTTGT
AAAAGTATTAGGTTTGAACAGTCTTTCTTTCTGAGGTCTGTTCAGAAGGT
CCTTTTTGATATATAACCATGATTGTTATGAACTGAAGGGGCCAAAGTGA
ATTTAAAGAAAGAGACACTTTGATTATTCAAATAACTATAGATATTTTGA
CGTAGAAATGAAGAAGTGAATGATAATGATCATCCTAAAGCTTTCAAGTA
ACTTACCTTGTGCTTGAGGTGAAAATAATGAAACTGCACCTTATTCACAT
CCTCAGCCTTTCGTGTTGACACTGGAAGTTTTTATTCATTTAATCAGCAC
CTCCGTATATACTAGCTGAATTTTGATCTGACTTTGAATGTCAAGTATCT
TTCCTGGGCTGGTGAGCTGGTGATAAGCTCGAAGTCTGGTAACAACACTG
GGCCTGCTCCAACTGCCCTTTTGTGCTGAGGCACGTGAAACACGGGATAA
ATCATGCTCGTTGGTGGCAATTCCAGCATTTTTTTGCAACTAGTGGCAAT
TATTAATTGTTACCCACTTTTATAGAAACGAGTTGCTAGTTTTTCAAATG
ACCATTTTTCTTATGATTTCTGGCTGTAAGCGTGTAGCTTGAGCAAGACT
AAATTTCATACTTGATGTGTATCTCTTCATGATCTGTTGAGATCGAAGGA
GATTAAGTCGCCCATCCGATATAGCATCGCAGAGTGAAGAGGAACAGAGT
GGAGAATATCTATATATGTTATAAATTAGTTTATATGAAGTCAGTTCAGA
GAGAATTATATTACTCCATTGTTTAAATGGTTTATGTGGGGCTAGTAGTT
TATTAATTATGTAGGTTTATTTAGATAAGCCCAAATTTTTACGGGCCTTG
GTCGGTTATGATATTTTATTAGGGTTTCTATTTCCTATAAGCATTATAAT
CCCCACATATTTAATTAGACTTTATTTTAATATATTATTCGTATATGAAA
TTTGCTCTATCATGGGTTGAGATCCACGACTTTTATCCCTTCTGCGGTTG
GGAAACCCTTGGGGTAGTGGGTGTTCTGTGGTTCATCCACTCGAGTTCTA
GCTTTCGCATTGTTCTTATTCATATATCACAAATTCTGCAAGTTTTCCTT
CATCACGGAGCTGGAGGGATTCTTCCACAGGCTGTAAAGTGGTGTGCCCT
GTCCATAGGCTGACCAGATTGGATGGTTCATGTCTTTACGAGTTTGGGAT
GGCGTCATTTTAGTCAACAAATGAGGAAAGGTGTTATACCAAACTCAGCC
CAGTGAATTCACTTGGCCATATGCCAGGCTGGCCTGAAACAAAGCGACAG
AGGTTGTTTTTGAGTCGCTTATTTACCATTTCTGACTGCCCTTTTGGATG
ACACCCGTACTTCTTTTCAATAAAGTGCCCTGTAGTTGAAAAATCTTGCA
CCAAAACAAGTTCACAAAAATCCTATCTCTGACTGAAATTATTAAGACAG
TAAATCCATGTAACAGTACAATCTCTGTGATAAAAGCTGCAGTGGCCGTC
AATGCTCAAAATTGTTGCTTCAGCCTTATAAAGTGTGCATACAACACGAA
ATATGATGTATCCTTTTGATGGTGGTAATCTTTCAATAAAATTGTGTGAC
TTGATCCCAGACTTTTGGTCGGCAGAGGCAAGGGTTTTAACAACCCATCT
GGACTCTGATTTGACGTTTTATGCTGCTAACATGTAGAAAACTTCTGGAC
ATAATTCGTGATGTTCTTTTTCATGCCTGTCCAGAACTAATTAGCTGCCA
TCCTCAAGTAAGTCTTAACTTCTCCAGAATGTCCAGTGAGGGGGGAATCA
TGATTTCTTCAGGAGATGCGGAATGAAGGATGATGTTTTTTGAAGAGTAT
ATTTCCTTTTGCACCCCGCTGGTTTTGGCCAAAATCACTTTATTACCTAT
ACTTTCTATAATTGCACTGTGCATCCCTTTACTATTTTTGGCGCGTCAGT
TTGCACCCTTCCGTTAAAAAACACAGGGTAGTTTGGGCAATATATAAAAA
TTAATTATTGATAGATCTTTATTTATTTATTTTGACCCTCTAAACGATAT
TTTTTGAAAATTCTTAAAGAATGAAAGTTGTAGAGAACGAAAAGATCCTT
TTAAAACAATAAAATTCAAAATTATTGAAATCTTTTTTGTAATTTTTTTC
TAGATTACAAAAATTAAAAATCTTGTAAAAATTCGTAATAAATTCAATTA
ATTTAGGATTTCGATAATTTTTGATGATTCAGAAACCCTTTCAATTACCT
ATAACTTTCGTTCATGTTGTCTCCTCATATTATGTTTTGAAATATTTTTG
AAATAATAAAATTGATTTACAACTCATGTTTTTAGTTTAAAATTCAATTT
TTCAAAAATATTTCGAAACATGATATGAGGAAACAACATGAACGAAAGTT
ATAGACGATTGAAAGTGTTTTCCGAATCATCAAATATCATCGAAATCCGA
AATTAATTGAATTTATTACGAATTTTTACAAGATCTTTAATTTTTGTAAT
CTAGAAAAAAATTACAAAAAAGATTTCAATAATTTTGAATTTTATTGTTT
TAAAAGGATCTTTTCGTTCTCTACAACTTTCATTCTTTAAGAATTTTCAA
AAAATATCGTTTAGAGGGTCAAAAAAAATAAATAAAGATCTATCAATAAT
TAATTTTTATATATTGCCCAAACTACCCCTGTGTTTTTTAACGGAAGGGT
GCAAACTGACGCGCCAAAATTAGTAAAGGGATGCACAGTGCAATTATAGA
AAGTATAGGTAATAAGGTGATTTTGGCCAAAACCAGCGGGGTGCAAAAGG
GAATATACTCTTTTTTGAATGACCCGTCTGCTGATTATATACCAACCTGT
CACCGAGTGAAGCCTGTCTACCCCCCTTGTCGCTTACTGACTTCTATATC
AGCCTTTAAACAGGTGTGAATAAGTCTCGGTCAATCTCCTTACGTATCAA
GTCTTGGTCAATCACACTTGTGTAAGTCGTCATGCTTAGCACTACCTTCT
CTTCTGTCTCGCTTGACAACGCATCTGCAAATCAGTTTGAAGCACCATTG
TTGTAACTTATATCAAAGTCAAAACCTACGCTATGCTGCCCATTTTAATA
GTTCGCCCCTACTTCCTGTTGCTGCATTATAAATCAAAGGCTTTGTTGTT
TGGTATGGATGCCTAAATGATGACCCATAAGTTAGTACTTAAACTTCTGC
ACTGCCAAACATATAGCAATTAGCTCCTTTTCATACCCCGACTTCAAACG
AGTTCTCACGCTCTAGATCTTACTGAAAAAAGCACTGATATTCCTAACTG
TATCAACTTCCCTGGTATGCTGTAAATGGACACATCAGTTTCAAGTACAA
ACAGAATTGAGAAGTCAGGCATTGCTAATATGGCGAGAGCAACCATGGCA
TTCATCGGTTTTTTAAAGGAGATCGTGGCAATGGAGTTGATCTTTCTTCA
ATTGATCTGTCACGGGCTGAGCAAATTGGGCATAATGGATTATGGACTTG
CAGTAGTAGCCCATTAACCCAAGGAACACTTCCAGAACCTTACTAATGTC
TACTGCTGTACCTTTTTCAGATGTCACGTGCCCCAGATATGCTATTTATC
ACCGCCTAAAGTCACACTTCAATTCAAGCAAGCACAGTGTGGTCAACCAA
TGTGTGAGATTCTGCATTGTGCAATGAGGCAGAAAAGCGGCGAGCCTAGA
AAGGTTCAAGCTCCTGGTGTCTGTTACTTTCTATCCTAGAAATTAAGTGT
CGCACGCATTGGTTATCCTCGTAAGATGAAAGTGCCAAGCTATGGGGTCT
CCCCATCTTTTTATTAAGCTTTTGGACCATAAGTTATATCGTACATGTTG
GCACTAACTCCACTGTTATTGGCGACAGATTAAGCTTGACTTGGTGTCAG
TGTATATTAAATAAGAAATAGCATTTAACTGCTGAAGACATACCTCATTC
TTCAAGAGTACTAGAAGACCCAGAAATGAGAATTTGTGGTGTCTGAAACT
ATAAAAATTTCTCTTTCTGCTTGGTATACCAATCCTCTTTACCTTATGTG
TGTGATAAATGATGCTGTGTATATGCTTTGTGACATTTTTCTGGTCTTTG
CTGTTACATTTTATCAGTAAAGTAATAAAATTATGCAAATCAAAAACATA
TTTTCAGTTCAATTCTCAGAGCTCAGCTGCCTCACCTCAAGTTGGGTTAG
GAATTGGAGTTCAAGCACCTAGTGTCAGCACTGTCACATCTGCCTCGTTG
CAACAGCAGCCAAATCCGACTCTTCAACAACAATTTAGTCAGCATGGACC
AATGTCAACTAGTCTTAAAGATTCAGGTATCCTGGTGTAAATTTGCTATA
ACACCTCAAATATATTTTCCTTTGCTTTGTTATCTCGATTTACTTCCTAC
AAGTAATACTTCAATACAGCTTAATTCACCTTCTCTACTAGTCCACTCAA
AGTATGTTGAGGACTCGTGGAATAGGGGAAGTCCTTAGACTCATTACCTT
TATTATCTTTTGTATTTGATGCAGATGTAGGTCATGCAAAAGTTGACGAG
TTGCAGCACCAGCCGAATGTATCCGATGATTCAGCTGCCGAATCTTCCCC
GAGGACAGGCGTTGTCAAGAATCTCATGAACGAGGATGATATAAAAGCTT
CATATGCTTTAGACACACCAGTATGTTTACATATATATGGATCACTTTGC
ATGATGTATATGACTATCAGATGCTTTCATGAAGTTCATTCTGTTCTGAT
AGTCGTATGTTTTGTTGAAACCGGGAAATGCAAGGCAACATTTTTACTCA
CTGTTTTGCTTCTTCCTTGCGAAAAGTATCTCATAAAAGCAAATTTAAAT
TATTATCCAGACTATGCTTTCTTGATCTGATGAATTTCCTTGAGCAAATA
TTTAAATGACAAAAATTTGATAATATCTGTTAGTCACAATGGTTGGGAGC
TTCATCGCTAAAGCAGTTTTAGCTTTTTAAAGTCCTTCCATAATAATGTA
ATGGATTCCCTTTGTTCCAAAACTATGGAATGTGCATATCAAGTCACTGA
TGAGGTGAGCTTTTCTTGATCTCTACTGCAGGGTGGAGTGACTGGATCCT
CAACAGAGGCCGCCCAAATGCCAAGAGACGTTGATCTCTCTCCTGGGCAA
CCTCTACAATCCAATCAGTCTTCAGGAAGCCTTGGTGTTATTGGTCGGAG
AAGTGTTTCTGACCTTGGTGCCATTGGTGGACCATCTCTGAATTCTGCGG
GTATGCATGATCAATTATACAATTTGCAGATGCTTGAGTCTGCATATTAC
AAACTTCCTCAGCCAAAAGACTCAGAACGTGCAAAGAGCTACACCCCAGT
ATGATACAATAATATACTTATTTCACCTTCTATTACACTATTATACATAT
GATTTGAGATTACTGTATAACATATGGTATGTTGGAATTCACAGAGGCAC
CCTGCCATAACCCCTTCCAGTTATCCTCAAGTACAGGCCCCTATTGTCAA
TAATCCTGCCTTTTGGGAAAGACTTGGAGCTGATAATTATGGCACTGATA
CCCTATTTTTTGCATTTTACTATCAACAGGTAGGTTGGGATATATGTTGG
CCATTCAATTGAGTTGCATAATTATTAGTAGATGTGGCTAGATAAGTGTT
ATTTTGCTGTTCTCAAGTTGCCGCTCATTTTATGCAGAATACTTATCAGC
AATATCTGGCTGCAAAGGAATTAAAGAAGCAATCATGGAGATTCCATAAA
AAATACAACACGTGGTTTCAACGACACGAGGAGCCAAAACTGGCCACTGA
TGATTATGAGCAGGGGACATATGTGTACTTTGATTTCCATATCAGTGACG
AGTCGCAGCATGGATGGTTCGCTTCCTTGACTCTGTTCTTGCTTTCTTTT
CCTGGTGACGTACATATGTTTTCGCTGTTTTTGTGTTTGTCTTTACTGGT
GATGGATATTTCTTCGACGACTTCAGTTTAAAATCATGACATCTGTAGTT
ATAAGTCAGTCATGATTATGCAGGGGACATTGTGTGAATGAATTTGGTAG
AGGCATATTAAATATTAGTGGATTGGGCTGATTTTACCTTTTTTTCCTGC
AAATTATTGGATGCACTATAATAGCCGGGATAGTCAGCTTATAAATATCT
TATGGTCGCAACCTTACATGCTTATTTGAATTCTAGTTTCACAATTCGGC
TCTTTAAAAGTTTCTCACTTGGAAGTTAATATAGTCAGCTTATGTCTATA
TATGGCATATGGCTTTTGAAATCCTTAATTATCTTATGGTTGCAACCATA
TGCAAGGTACATTAATCATTTTAATTCTAGTTTCACAATTTGGCTCTTTA
AAAGTTCACCGCGTGGAAATTAGGGATGACTCCCTGTAATGAAATAGAAT
TGCTTAGTTGGTTAACTTTATTCTGGGAATGCTTCATCTGTTTAATTTGA
TGTCAATAGTTAAGGATACACATAAATCCCAGACATGATATAATTTCTAA
TTATATCTTTTTCTGATGTGTGTGTTGTTGGTCAGGTGCCAAAGAATCAA
GACCGAGTTCAGATTCGAGTACAACTATCTTGAAGATGAACTTATCGTTT
GAAATGTATATAGTCCCTAGATACTGTGGATTGGAGATTAAAATGTAGTT
TTGATCATGCATTGTTTTCTTTATTTCCTGTCAACGTTTACAAACTGTAT
TCAGCATTCAAATCGCATCAGTGAAATTGTGTATTTTTCGCTATCTAATA
AATCCCGCAAGTTTCCAGTA
Sequence Length:
17820
Sequence Checksum:
255873167d6fdb8fa28d267179df7565
View location in JBrowse:
Gene:
LOC108223027
Gene Biotype:
protein_coding
Gbkey:
Gene