Resource Type:
Gene
Organism:
Name:
LOC108222957
Identifier:
LOC108222957
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017396954.1, is a part of gene, LOC108222957. |
| The genetic_marker, MK001147 GSSR-148, is located in gene, LOC108222957. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017396954.1 | XM_017396954.1 | mRNA | DCARv2_Chr5:28138397..28157604 |
Sequence:
GATGCCATAAACCCTCTCTGAGAAAAAAAAATCTCTAATTTGATTGGTAA
AATACTTGACACACTGCAGAGTGCAGTCTGCACTACAAATCTACATTATT
GTAATCTTATACACACACACACACACAAACACAAACACACTTGCTTACAC
ACATTGATGCGGAGTTGAACTTTTTCACTCCTTTCAGATCTGTTTAGCTA
GCAGATCACTGTTATTTAACATGACGATTCTGCATCATCTGCTCCTCATC
GCTTGCATATTCATCTCTCTCAATCCAATCATTCCTGCGATTGCTGATTC
TATTCTAGGTTGCGGCGGATTCGTCGAGGTGAATATCTGTTTCCGTGTGT
GTTAGTTTTATTTACTTGTCTAATTATCTAATTTAGCCAGATTAAGTTTC
GATTATCGAATCAGTTTCGTTTTTAAGTTTGTTGCGGCGGCTAATTTTTT
GTCTTACATTTGATTATTGCTAATTAAATTTGGTGCTAGGCGAGTTCGGC
TTTGATTAAGTCACGGAAGGCAACTGATGCGAAATTGGATTACTCACATA
TCACGGTATTGGTTCTGATTTCTTCGTGCTTTTGTTGTATTTTGCGTGAT
TGGGATGAGCTTTTGGAGTTTCGTGCTTTGGTTATTTGGTATTGATGATT
TGATGTCATAGTTGACCCTATAGGACAGGTTGGATGATGCATTTTACTCT
AGCAAACAGTATAATCTGTACAATCATGTATTGTTTTATTAAGTCTGTGA
ATGTTTCTGTAGATGATTATTGTTAGTTAATTGGGTGGTAAGTTGCGTGT
TTATAATTTCAAAATTGTTAGTATGAGTTATAATTTTTAGTCACAGCTTG
AGAGTTGGTACATTCCTTCTTTTGTTTTCTTAGGCTTGTTATAAATTCAT
AATTTAGCTATCATGCATTGGAATGAAGCGCCCTTCATGTTAACCTCTGT
ATCGGCTTGAAACTAGTTTTATGTCGATGGCAAGTGCTACTTGTATAACA
AACTAATTATCTTTGTATGTTGCAAGTAATTATCTACTACTGTAATCGAT
TTTAGCTGAGTTCTTATTGCCAGTTGAACACCAATGCTTATATGCAATAT
TAACATATGTGAGCTAAAAATTGGAATTTAACACTCTGCAGGTTGAGCTT
CGGACTGTTGATGGATTGATGAAGGATAGAACACAGTGTGCTCCAAATGG
CTACTACTTCATTCCGGTTTACGACAAGGTATTTCGCTGTGTATTATGCA
TTTTCTGCTCAAGTTGTACCTTTGGTGTGTTGGTCTGCACAAACTTAAAA
TACTCAATTTAGCAGGGAAATATGAACTTAATTTTTCAGGTTAATTACTT
TGGTTCTTGCTTAGTAGAATTGTATGTACATGTGCACAGTACATCCCTTA
TTTATTGACAGGGTTCATATTCTTGGAAAGGAATGCAGTTCAAAATTTCA
AATTATTTCAATAAATTTTGTCTTATCTTGTTTCACATTAAAGTGTATAT
TCATTTTTCGTTATGAATAAAACTTTATCTTGGGATGAAGCGAATTTATG
TACCTGCATAAGAAATATCTGGCTAGATGCTTGGTGTTTTAGTGAGATTG
GAATATGTAAAGCAATTCAGTGCCAAATACTGAGAAGGGGAAAAGTTTGA
ATATAACTCTTGCCGAAATTGAATATTCTATATACTAGGATTGGCTTTGA
GTTCACCTGGTCCCGGTACCTCAAAAACTGGATTGATGATTAGTCAAATA
TACATGTATGCTCAACCTTGATTCCTAATGAATTGACGATCACATACACT
CAATTTTTTTGGGCCTTACGGATTAAGTTAATGTAAACAAAGTGGTTGAA
CTGCTAGGGTTTGAAGCCAGTGCAAGTTAAAATTTAGGAATCAATTACTT
TAATTATTATGTTTTTTGATGGAACTGATATAATGACATAGGGAAACTTG
AGTTTGAAGAAGTGGCTTCCTCTTCATAGCCTATTGGCTATATCTTCATT
GCTTAAATTTAGTTTGTAGTGAGTTGTGGATGAATCCAAGACCTAATGGC
CTTTGCAGCCTGTAAGAGCAAGTCCAAGAGATGCCTTATATCACTAGGAC
AACCTCTTCAAGCCCTATTTTTGAGGCACCTCTCTCCTTGCCCTATTCTA
TATTTTATAATAAATTCTTATCAGTACTCTCATCCTCTCTCTACTTTATA
TTATGCTTTAATGATAAAAGAGAATCTTTAATGATAAAATATTAAACAAG
TATTGAGAATAAGGCACATTGTTGGAGTTGAAGTTAATAATATATGTCCT
AAACTACTAGGACATTATTTTTTATAATTATATTTAGGGCTTGAACTATG
ACACTGTTTGACTTGCTCTTATGTCATAGAATATGTAAACTTATATACAT
TAACAAGGCTATCTTTATATTTGTGTAGCATACCTATAGTATGAACGAGT
GGTTCTAATGTAAAAATCTTCCACTACAGGGCTCCTTTGTGATTAAAATA
AAGGGACCTCAAGGGTGGTCATGGGATCCTATTCAAGTAAGTCCCATAGT
TTGTTTTTGTTATTAATTAAATAGTTCTTGTCCTTTCTGAAAGAGCTATA
TGTTGTAAATTCCCTTATCATAGTATGTTATCTGACATGTACTAATTTTT
GTAGGTCCCTGTTGTTGTTGACCACAATGGTTGCAACGCCAATGAAGATA
TAAATTTTCAATTCACAGGGTCTGTCTTACTATGACTGCCATGTAGTCTT
GTTTCGTTTGCAATTATAACAATATTTCTGCTATGTTATAATAGAATATA
TGTTTCCACTTCTAAGTTATTCCTTTCCAGGTTCACTGTATCAGGTAGAG
TTGTTGGAGCTGTTGGTGGAGAGAGCTGCTCGCACAAAACTGGTGGTCCA
TCAAGTGTAACAGTTGAGCTTTTGCATCATCCCTCGGGTGCTGTTGCTTC
ATCTGTTTTGACATCCACTGATGGAAGTTACTCCTTTTCAAATATTATTC
CAGGTTTGGAGATTGTTTTTCTCTTTACTAAAGCTTATGTAAATATGCAT
TATGGTTTACTTGCATGGGAAACTCATTCAGTCATTTATCTGTTTATAAA
ATACATAATACTTTAAAGAGGTTCGTATAAATAGTTAGTTTTCAAGAAGG
TTGGACAGTTGAGTATCAAATTTCAAAATTGTCCACTCTTTTATGTAACT
AATGGAGTATTGTATAGATATTAACCAATTGACTTGAAGATTATTATTTT
ATCCAATGACTAGTAGCTCTGCTCTTGTAGTCGATTCACCGTAATGTATA
TGTGTATATAGTTATATACATGTTCTCGTTATTTGTATCAGCAGATCCAT
CTTTATTTAACTTCATTCTTCCTTAACAAAAATTTCTTCATACTCTACCT
TTTGTATCAGCATGATATGTGATATACTAAATCATCATTGCATGGAATAG
GATAGTTGACTCATGATCTGAAGACATGGTATTCATGAACACCCAAAATT
CAAATAACAATGTCAGTGTATTCTCCAACCCAACATTTGAGTTATGTAGC
AACTTTCCATTGAAGGTGCTGCTTTCCCATATTGCCTACATGTGTAAGTT
GTAACTATGTTATGTAACTTATGGGGTTAATTATCAAATTGGGCACTCAC
TTCACATCAATATATCATCCGGGGCACTCTCGAATTTTCGGTCTCATTTG
AAACACTGTTTTCAGAAATTGTATCAGTCTTAAAAGTAAAAAGTTAAATT
CAAAAACAAATCGACAGTTTGAGATGCGTTACTCATGGGGATTTAACACA
GTAGGCTATAGAGAATATGTAGGTACGATTAATTGAATTTCTGCGTTCAA
AAAATGGCTATATATGTATTATTAGGGTTCTTCATAACCCATCTCTTCCA
CCATCAATTTTATCCATTTTTTGGATGCGGAAATTCAATTAATTGTACCT
ACATAATCTCTATAGCCTACCGTGTTAAAGCCCAATGAGTAACACTTCTT
AAACTGTCGATTTATTTTTGAATTTAACATTTTATTTTTAAGACTGATAC
AATTTCTGAAAACAGTGTTTCAAATGAGATCTAAAATTCGAGAGTGCCCC
AGATGATATATCAGTGTGAAGTGAGTGCCCAATTTGATAATTAACCCGTA
ACTTATGTTACTATTCGAGACTCATTTCATTGTATTTATCATAGAGTTCA
ATCATAGATAAGTTAATTAGGAGGTTATATTAGGTTATGGGAGTAGAGTA
CTAAAATGAATTGTTTCTATTATCCGACTTTGGTAGTGGATTGTTATTAC
AAGATATATATTAATTACCTTAGTTTGCCTTCTATTAGTATTAGTTTAGG
GTTCTACTTTTGTAGAAGGATATTTAATATTCTATTGCATTCAGATATAC
TGAATTATGCTGATTATTGAGAATCGTCCTCTCTTAACTATGGGTTGTGA
TTTGCGATCTATCATCTTTTTCCCATCTTTAGTTTGGAAACCCTAGGTTA
GCGGAATTTTTTTGCAGTCAACCCACCCAAGTATATCTTCTTACTGTTTT
ATTACATAAATTTCTTGTTTGAAATTCGTGTCTTACATCCCTATCTTTGC
ATTTACATCACAAGAAGTTATCCCATTTTAATATAGGAGAAATAGAATGA
TTTCAACTCTATTTTTAGAAATTGAAACAGTATAAATTGTTTGAAATTCG
TGTCTTACATCCCTTTATCTTTGCATTTACATCACAAGAAGTTATCCCAT
TTTAATATAGGAGAAATAAAATGATTTCAACTCTATTTTGAGAAATTGAA
ACAGTATAAATTGTTTTTTTTTATCCTTTTGTTTCATGAACACTCACTGT
CAAATTATGGATGATTCTGGTTGTTATCAACTTTCCAAGCGGATTATCAT
CTATATCAAAACCAACCAAGCTCAAGCAGCTTGTACCAAACTCAGATTAT
TTTTTCGAGCTCGAGCACACCATTCATTAAATGTTTTCATATTCAAGCCA
TCTACTATTTACTATGTGTAAATGCATGGGCAGAAAGAATTGAGATTAAT
AAATCTTTGATTGATTAAGTTGAAATTTGTTTTATTTTTATGTTTTGTTT
TATATTTTACATATAGTTTTCTCAAGTAATAATTTTCACTGTAGGAGTTT
TCAGTATAGTAGGATTCCTTAATTATTAGTAGCACTACAAAGGCCTGGTT
ATTCTAAATAAAATTCTGGAATATAGGGAATTACAATGTACGTGCTGCAC
ATAATGATTTGCCCATTGAAGTCAAAGGTTCCACAGAGGTGTGATTACTA
TCCACAAAATTCTCTTTTTTTAGTTACTGCCTTTTTCCGGATATCTTATT
CTTTAAGGGATCCTACATTGCTACAACATTCAATGTTCTAATACTGTGAA
ATTGACATCTATCATAGGTGGAACTGGGCTTTGGAAACGCTGTAATTGAT
GACATTTTTTATGTCCCTGGCTATGATATTCATGGACTGGTTGTTGCGCA
GGTGATAATCTTTTCTTACTCTTCCGCCCCATTGTCCACAAGATTATTAT
TTATGATCTACTTATTAAAGTGCTAATATCTATACTGTGCCAAGCTATAA
TCTTTCTTTTAACTAATAGACAATAAATGCAGCTTGTACCATTCACTTCC
TATGCTAAACAACCAGTTCTTCTTGCTAGTATAAAAAGGAACCAATCCTT
CCTAAGGTTTATACTAAGTAGTTATCAATAAGAGACCTCTCATAAATATA
ATTATATGCGTATGTTAAGAGAGAGAGAGAGGGAAAGGGAGATGCATAGC
TATAGTATAGAACTAAGTTTGCGTAATCACCACTTCAATTCATAGCAATT
GCTATAGTCATTTTAGCTTAGCATTGGAGTCTCTCGTATAGTATGTTTGG
ATAGGGGGCTGAGCCGCTGAGGTTAAGGAAGGGGAGGGCTGGGTTGGGTT
GGGTTGGGTTGAACCCATAACTTGTTTGGATGAAGGGCGGCAGGGGGTGG
ATGGTAGGCTGGTATGGTAGTTAAGGTTGATTTTTTTTTAATATGTAAAA
TAAGTTTTATAATTATAATTAAAGTCTCAGAATCAAAGTTAATATATATT
TAAAAGATTGAAAATTAGTTTATTTGCCAATAAACAAATAGGAAATACAC
TTTTCTATTCTGACAACCTAGAAATGATCTATTTAGTATACTTCATTGTA
AAATTTGAAATAATATGTACGAGTTTTTCACATTCTAAATAAGTTGGTAT
TTTTTATCTTTTTGTTTCAAGACTGTCATGTTTACTATGTAGTTGTATTA
TTTCTAGTTTATCAGTTATTTGTGCATTCACGGACAGGTTCTGAATGTTG
GATCCGTTAAATATTTTAAATAGCATTAAGAAAAGATCTGTATTGAGATT
GCTTGTAAATTCCCACTTCATTTTTGTTTAACTAAGTTTTTATATCATGG
ACCAGGTTTTTAAAAGGGCAGAGGATAATTTAAGTTTTTGTCATTATTAT
TCTAATAATAAAACTGACATCCTTTTAAAATTAAGCTAATGCATATTTAC
CAACCTTTCTTATGCAGGGAAATCCTTTATTGGGTGTTCATATATATTTA
TATTCAGATGATGTCTTGGAGGTAAATTGTCCTCAGGGTTTTGGTGATCC
TCCAGGCGAGAGCAAAGCTCTCTGTCATGCTATATCTGATGCTGATGGAG
TGTTTAAATTCAAATCTATCCCCTGCGGTAACGCGCTTGCACATATGTGG
CTTCCGCAATTAACTGTGTTTTTTATGTCATTTTTTTTCCTTTAAAAAAT
GGCTACTTCCTTGCAAATCTATTTTAATTATGTGCATTTAGGTGTCTTCT
TCATCGTGACCCTTGGGACATATACCCTAGGAAGCACGGACTCGAATAAG
GCGACACAGGACTAGGGGATTCGCCAAACGGCGTAGAGTCTTGGATGCGG
GATCTGGCAAATAAATAAATAAATATATATGTTTATGATAAATTTTGGAT
AAGTACAAAATTTAACATTTTCATTAATAAGTCATATCCATTACAAGTAC
TGAAAGTTTCACTCCTAAAAATAAGGTACAGAGGCAGAGATGATGAGATT
TGTATGAATATATAAAAGATGTGTATATATAGGCAGTTGATGTTAAAATA
AGGTTACAAAGACATTGTGCTGGGCTTTTTCTTACTTGGATTGGGCTTTT
CTTACTTGGGCCGAGTCTCAAACGTGTCTGCCCCAAGTCGGGGCCGAGTC
CAACCCCATTTGCGCCCCAACTCTCCACCTGGCGAGTCCAGTATACACTC
AGCTGAGTCGGACTTGCATACGGCAGCCAAAGCGAAGAGTCCGTGCTTCC
TAGCGTATACCACAATGATAAATTCTTTAGTTTGAAATTTATGAATCAGG
TCTACAAATTGAATGTGCATCATTTACTTCGAATTTGTTTTTATTATTAC
AGGAGCATTATCATATTATTTATACCCAATTTTCATTCATAGTTCCAGTT
AGTAGACTTTACCTTAACCTAATGTTTGACCGAGAAAGTGAGCTTGGTGA
CTGGTGACTGCCAATAAGTTGTTCTGGTGTGGTCTGTCTTTGTTTTATCT
TCTGCTTACTTATGCTGAATACATATTTGGATTATCATGTACTCAACCAA
GATGCTAATTTTCATTAACCTATGATTTTGTATGTATTTTACCTATTAAT
TGTTGTGTCTTGTGTGTAAGGACATGAATTTTACTGGCATCTGTATTGTC
ATGTTGTATTTGAAAAATTAATGCTAGTTTTGAACTCTACTATATAATAT
ATTAGTCTATTATTACAGAACTTGTGTCATATCTGCAGGGTTATACAAGC
TGATTCCATACTACAAGGGAGAGAATACAGTGTTTGATGTTTCACCTCCA
TTCTTGTTTGTGTCAGTTCAGCATGAGCATGCAACCGTCCCTCAAAAATT
TCAGGTACACTGTACATTTCTTATATGATGGATCATGGATACTTGGCATT
ATTGTTTTGTCTTGCTATGTAATGTGTAAAACATTTCTATTGGTTCATGC
TTTCTTCAACATGCATATTTTCCACAGTGACTCAACTACTTGAGCCGTGG
ACTTCTGTGGTGCAACTTCACATCATAATTGTTTGAACTTGTATCTGGTG
CAACACATAATGTACAACCCATACAGTATTTGTTGATCTTCCTCTTCCAT
TCACAGATTTGATTTTTCCACTTTCTTAAGTTGATCCATTGAATTAACTC
CATGGACTATTTTTCTTTACTCTTTACCTTCCACGTTCGTTAGAAGGTAA
CCATATAATCCCACTCTATGCCTAGGTACTATTAGCTCTATGGAAAAAGA
ACAAAAATGATTCCATGGTATAACTGATGGACTAAACCTTGGTATAGAAA
AAGAGCACATATTATGTATTAACTATTAATTGAAAGTTGAAACAAACATA
GCCTAAATCCAAACCGTAATTATGGATATAAATGCATCTTTTAAGCCCCC
GAGATACTGCAATATTTTTGCATTCCAAGTACCTAAAGGTATACATCAAG
AAAGATTCATTAAGGTAGGTCTTTTTGAAGGGTTCAAGTGGTTTACTATT
GAGTCATGACTTTGTTGATGCTAACTTTACAGCTTAAAATCTGAATCTTT
GATGACTTCTGGTATTACATTAGCCTGCCATAGTAGTTTATGATTTGATT
TTGGATTTTTTTGGGCCTGCAGGTTACTGGATTTTCTGTTGGTGGTCGTG
TAGTCGATGGAAATAACAAGGGAGTGGATGGTGTAAAGATTATAGTAGAT
GGCCAAGAAAAGTCTATTACCGATAAAGAAGGATTTTACAAGCTTGACCA
GGTAATGTTATTCCACGAGCGAGATTTTTACATGAAGTGCTTTTCGACAT
TGTCTCGAAATATCGAATTAATTTTAAAATGTTGTACATCAAATTGACTT
TTGCTACTCAATTCATACTCATACTTGAGTTGGTATTGCTATACTCGCAT
GTAATTTTGATACGCAACTTTCTTTTATTTTTATAAGAATCTGAATATTA
GATACTTTGCACGGTTTTGATGCCTACCAAGAATATTTTGCATGGCATAC
AAGCCTGTAACTAATATAAAGAAAGTTCTCTTGTTATCCTTTTATCAAGT
TATATTATTTTTTGTCTGACATATCAGATTGTTTCCACTTCATTGGCTGT
TGAATTCAGTAAAGGTTCTTTTTCTTCTGAAGCTACTGGTATTTGTAAAA
CTGACTATCTGTATCTCTTGATACAAGTCATTCATTCTAGCAGTGTATTT
TACGTGAAATCGTGCTAGGGATATATGTTGTTACGAGGGTAAGTTAAATC
TATTGTTATGTTGGCCATTGAAAAAAGGAACACCGGGCACCTATGTTGAG
TGGGAACAAAGAAATTATATATAACTGATTTGCAGCTGCTCATTTATCTA
TTTGAACTTTCAATTTGAACCATCATATCCTTATGTACCTACATGTGCTA
GTGCCTTTGTATCCGGACATGATATACTAGTTTTTACCCATGGAGATTTG
CTATTTGCACATTTGCTACATGCATGTTATGAACCCAAGTATCATCGTGT
AAATTGGTACCAGGGTTATGTGACTTTTACAGTCTTAGCTTGTGGAATTT
ACTGTGGACTCAACAGTTTTTCTATTTTTTTTCCAGGTGACATCTAAACG
TTATACAATAGAAGCAAAGAAAGAGCATTACAAGTTTGACAAACTGCATG
ATTTCATGGTAAAAGGATTGTAATACTTGTTACATTGTATATTTGGGGCA
CCATAAAATGGTTAAATTTTCTCAATAGTTTGACCAAAGGCTTATTTGTA
CTCTATATCTTCTTGTTAGGATGTTTTACAAAAAAATTATCCTTAAAAAG
TGTGGATGTCCTGAAGAGTGTTCTTTAAGAGAGGGACCCATAAAAACATT
CAAAACCTGAAAAGTGCTTGCCAATTGTGCTCAAGAGTTTCTTGAGGATG
TAGTCTATGAAAACAATTCAATACTTTTTAGGGAAATACTCATTGGTACC
ATTCTGATTTTGGCCTTTTCAAGTGGCGCCATTTTGCAATTTTGGCTTAT
GAGTGGTACCCTTGTATTCTAATTTCTAAGTCTCTCTCTCTCTCTCTCAC
ACACACACACACACACACACACACATGGGGTCATGTTCCTCTTAGAACCA
TTAGCCTAAGAACCCTTAGAACCTTCTAGTATTAATAGGGTTCTGCAGCA
GAACTGTACATGCAAAAAGTGTCGTGTTTATGTATTATATTTTAAAATTA
ATTTTGAATACACACAACGATGCAAAAAGCATGTATTTAAAATCTAGTTA
AAATTTAAGGTTCTGCAGCAGAACCTTAGTGGTTCCATGGTTCTATTTTA
AGGACTGATTCTCTCTTGAGCGCGACCCTATATATATATATATATATATA
TATGTATGTATATGTATGTATGTATGTATGTATGTATGTATCATACTATT
TCATTACCCAAACGTTAAAGTACCACACATAGAAGTCAACAAAATAATGG
TATTTCTGAAGTTATAAACCATTTTTGTTCAAAAATTTGGAGGATTATAT
ATTTTAATGTAGATAGTTACGGGTGTTGAAAGTGTGAAAACACTGAAGTT
TAAATAGCTTATTAAGTCATTTTATAAATTTTAGCGTTTATGTGACATTT
AGTTAATGGAATCCCTTCTTTTTATTGCAATTATTACATAGACCCCCAAT
GGTGTATTAGTTATTACCACTCCCTCTATCTCTCACTGACTCGAAAACAT
TTATATTCATCTGTTTGGCATATTTATTTGTTGGTTAGGTTTTGCCAAAC
ATGGCTTTGGTTGATGATATTAAAGCAATCTCCTATGATGTCTGTGGCCT
AGTAGAGACGGTCTCTCCTGGGTATAAAGCGAAGGTGATTACAAGTTTCT
TTTGTAATGAATTGTTTACATCAATATATTCTGCATGCTACCCTTTACAA
GCATCTGTTAGAAGGCACATGACTTGTAATTTAATACGCACATGCAATTA
TGCAATTTGTAAACATGTTTATTACATTCCTAGAAATTTTTGGTATTCAA
TAATTTTGAGGTAGGTATTGGGACTCATCTTATTTATATATTTTGTCATA
AAATATATTTGGTAAGAATATCTTCTCTCGTTCTATTTATTATTTTAATT
TCTGTGCTAGGCATGAAAGTTCCATTTGATAACGTGCTATTATATTTTAC
ATATTTGCCATCTTGTGCATAAACCTTGTGTTATATTCTTATATGTATCG
ATTATGCATGTGTATCAGGTTGCTTTAACTCATGGACCAGAGAATGTTAA
GCCTCAAGTAAAACAAACTGATAATAATGGCAATTTTTGCTTTGAGGTAT
GTTGATACATGTCTAGTTGGTAGTTTTCTAATTTTATTTTTTCTATGTCT
ATACTTCTGTTATACTTTATCCTCCTAAGAAATATAACAGTTTCCAAGAA
CCACACTGTTAGGTTGGAGGCGAATTTTTCAAATTGATAAATTTTATTTC
TTCTCGAGTGGTTTTCAGGTTCTGCCGGGTGAGTACCGCTTGTCATCTTT
TGCAGCCAAGCCTGAGAGTTCTCCAGAGCTCTTGCTCTTGCCTCCTTATG
TTGATGTCAATGTCAACAGGCCTTTACTAAATGTCAGATTCCATCAGGTA
GTTGCAAAGGCTGCTCAGAGCCTCAGACTAATCTATTCTACCTTCCCCTG
CCTCCTAAATTGTCTACTTTTTTTTTTCCTTAAAAAAATGTCTTTTGTTG
CTCACCTAGTAATATGGAGGAACACCATAACTAAATTTGAGAATGTTATT
ATGTGAATCATTGTCTCGCTTCATATTCTTCTTTAAATAATTTCCAGATA
TTGAATAGAATGTATGTGCTGTTGGCCAGGTAGTCACTGTGGACTGCATT
CAATCATTCAGGTTTTACATTACTAACAGAATCTATTTTTGGAATGAATC
AGGCACAAGTAAATGTTATTGGTTCAGTCATGTGCCTGGAAAATTGTGGC
TCTTCTGTTTATGTTACCCTTGTAAGATTGGGTGGGAGCAGTAAAAAAGA
GAGAAAGACAGTTAGTTTGACTGATCAGAGTAGTGAATTTCTGTTTCCTA
ACATCCTACCAGGGAAATACAGACTTGAGGTATTGTGCTTGAGTTTTGCA
CTTTTATTTTACTTTTTCCTGCGTATTACTGAATTTTTTTAATTAGATAA
ATTTATCTCTTATGCTGAAGCATGAACACTTATGGGTAACAGCATGCCTG
CCTTTTGTTATTTTGTCAATACAGCCTTAGAATTTCGTGGGAGTAGTTCT
TCATAATATTGTGACTCCTGAATTTATTATTTTCATTAATCTCATTTTTG
AACCACTGCTTCCATTTTTAGGTCAAGCGCCAGTTTCCAGGATTGTCAGA
AGATAACTGGTGCTGGGATCAAAATTTTTTTGATGTGGATGTTGGGACAG
AGGATGTTAATGGGATTTCATTTGTTCAAAAGGGTTACTGGGTCAATGTT
GTCTCCACTCATGCGGTAGATGCGTACTTCACTCAGCCAGATGGCTCTCA
CGTGAACTTGAAAATTGAGGTTGCGCTCTTCTGTAATTTTTTTTATATAA
TTCAAATTTTACGTGACACCTTAAATATAAACATTTAGCAAATAAAAAAA
ATAAATATAAACACTGCTTTCGTGTACAAAACTGATCGTTTTTCTTTCAT
TTTTTGCTGTTGTCTGATAAATTGCAGAAGGGTTCACAAAAAATTTGTGT
AGGAACTCCTGGAGTACATGAACTTCACTTTGTAAACTCGTGTATTTTCT
TTGGTAGCTCACCCGTGAAAATTGATACATCTAATCCTTCGGTATGACTC
TTGGTATACATTAATTTCCTCTGATAACATCGTAATTCATTTGGAATTCC
TACTTAACTAGCTGTTTTTGTTGTCTCTATAGCCTGTGAGTCTAAAAGGA
GAAAAATATCTTCTGAAAGGTCAAATATCTATTGAATCAAGCTCCCTCGA
TGGTTTAGACACGAGCGCTGACACAATTTTAGTAGACATTCTAAACAGTG
AGGGTTTATTTGTTGAGGGTACTAGTGCCAGATTTGTAGGTGCTAGGAAT
GGTCAATCCGACGCGTCTATCTTCGAATATTCATTATGGGCTAATCCTGG
CGAGAAGCTTACATTTGTTCCTCGGGATGCAAGGTACATAGCTTAGTTGT
TTTCTGTTGCAATACATATAGAATTTGGTATTGTTGTCCATGTTAAAATC
TTACTTTTTCCTTCAGTCTGTTTACAATTTTGTTACTGGGAACAGTCTTT
CATCTTTTGCCTTGAAAACCATATTTCTTATAAAATGAAGCACGTGTAAT
TATTTTAGCTTCTTGGATTCAAACCTGTCAAAAGCTTATATATGGATGTG
GTTGAGATAATATATACCTTGTCGCCTCATTAGAGCATGACCTATTTGAA
ATTATATTAATGCCTTTTTGTTGAAGGCACATGCACTTACCTAAAGGTTC
TGTTGAGGTTTTAAGAGACTGACACTACTTGGACACTTGTAAGAATGTAT
CAGCAAATTTGCCTAGTTATGTAAAGAAATGAGGGACAGAGGGAGCCACG
GCCTGAAGGGAAATTATGGGAAAAGTGCTTAACTGAGAAACAGTTGGGAG
CAGAGTTTCTGCTGTATAGGAAGAACCTAGGAACAGTGGGGGTCTTGATG
AGGACAGAGATTATTTGAGCTTCCAGTTCATATATCACTATTTAGACCAT
TTAAAGTTCAATACACAATGCCATGTAGCCAACATATGGGTCATTTCAAG
AAAGTTCACTCTGTAGTCCCATTTTTTTAAAACTGATAATTAAGCAAGCG
GTATAGAGAGTACTAGTGATTGTAATAACGCCTAATGAGTGAATTTACTT
TCCTCATATTGGGAGATCTTATAGGTACTTGAAGTTGCTTACAGTGCTTG
TCTGTATTTTGTTGCGCATCATAGCTCACCGACATAAAATGTCATAGAAT
ATATATGGGTCATGTTCAAGAGAGAACCATTAGGCAGAGAACCCATAGAA
CCCTTACCTTATTTCTAGTATTAGTTAGGGTTCTGCAGCACATGAAAAAA
ATGTCTTATTTATGTATTATATTTTGAAATCACTTCTAAACACACACAAC
GATGCAATAAAAACATGTATTTAGATTTAGATCCTGAAAATCTATGTAAA
ATATGGGGTTTCGCAGTAGAACCTTAGTGGTTCTATGGTTCTATTTTAAG
CATTGGTTCTGTCTTGAGCGTGACCAATATATATATATATATATAGGATA
GGATCAAATAAAAACTTTTTTAAGTTACAAACTTACAAACTTATTTTTGA
ATTTTTTTGGTTCTCTCAACCTGTTAATCCTTAGTTATAGACAGTATTTA
TGTTGAAAATTATTGAAAAAACATCACAATTTTAAAAATAACGTACAAAT
AAATTGTGCATTCAACACATTTGTAACTGGGGTTCAACGTTGGGTGTAGA
ACATTAATTATCATTGTGTTGAATATATTTATGGAGATGCTTAAACTAGA
CCTCTGGGGTTCGGGTAGGTTCTAGAAAGAGAAATATTGGTTAATATAAT
ACGTTTAACTTAGTTCTTACATCGAAAAATTAGTTTATGTACTTCTCCAA
CACAATTTTAATCGATGTTCAACAAAATATCTTAAAAAAATGTTGAACTC
AAGTTATATATTTGTTGAACGNACACATAAATACATAAATATATATATAT
ATATATATATATATATATATATATATATATATATATTAATTATGCCTGCC
ACGCTGCCACTGCCCCTCCTTGCTTCCTAGGTTCTTAATGTATTATGCAC
CTCATTCCAGATTTCCAGTTGTATCTTATTGAAAAGTCATTGTTATCTTC
AGTTGGTATCCCTAGAACTTTTTGGTTATTTGATTGAAAAGTCCAACCTA
GTTCTTATCCGTGTCTTATAGCCTATAGGGGATTTCTAAATTACAAGTAA
TTGGTTACTGGAACAAATTGTCACGAGTTGAATTGGTATGATTCTGAAAG
CTTATATTGTTGGATTAAAATGAGGATGTTTGTCAACTCTACCTCGGTCT
TTCATATGCTTGTAGCTTGTTGTGAACTGCAATTGTCTTGCTATTTCTAT
TCCCTTTATCCTTTTTCCATGCAATTGATGCAATTTAACTATATTATCTT
AACCTGGCCTATATATGTTGCAGAGATAATGGTGAAAGGAAAATCTTATT
TTATCCTAGACAACATAAAGTAAGCGTGATGAAAGTTTTAGTTCAAAGTC
AGATTTCACCTGGCATTATTATTTTGTATGACATCTTCACCTTTTCAATT
AGGTCGCAGTATCACAAGATGGTTGCCAAGCTGCCATTCCCTTATTTTTG
GGTCGTCTGGGGTTGTACATTGAAGGATCAGTCTCTCCTCCCCTTTCTGA
TGTATACATCAGAATTATTGCTGGAGCAAATAAAGAAAATGCTCCAATGA
AGCCAGCTGAAGTAGTACTTGAAACCACCACAGGAGGAGATGGTGTTTTT
GTTGGTGGACCCCTATATGATGACATTACTTACAATGTTGAAGCTTCGAA
GGTTTGTCTAGTATTTGATTTTAATAGACCACCCTAATTTATGATTTGCG
ATTATATTGAATTACTAGATTTTCTATTGTTATTGATAGTATGATTATTT
ACATTGCATAAGGATTTTTTATTCTCTCCCCGACTCTTTGGAGTGGTGGA
AAGAAGGGCATAGGAAAAAAGTAAATGGCAGATTAACTCAATATCCATAA
TTCATTTTTGGAACGGTGCAGGCTTTCTTACAAAAATACTGTGAAGTCTT
ATATATATGCTTATGCCTGTGCCGTGCTTTATCTTCTCAATACTTGCGCA
ATGAAGTTTTCATGTATTATATAATCTTACATTTCATTGTTGTCTTTGCA
GCCTGGCTATCATGTAAAGGCAGTCGGACCTTATTCATTTTCCTGTCAGA
AGCTCAGTCAGATTTCGGTACATATATATTCAGAAGAAAATCCCAATGAA
CTTTTTCCTTCCGTTCTATTATCATTAAGTGGTGAAGATGGTTATAGAAA
CAATTCAGTGGCTGGTGCTGGTGGTACTTTCCTCTTTGATAACTTATTTC
CCGGGAGCTTTTATCTCAGACCTTTGCTTAAGGTATGCAACTATATCAGG
TGGGGGGGGTGGGGTGGGGGGGATTTTTACTGTTGTAGTTAATAGTTATA
CACTTATAATTGTTTCGTAAATTCTCCATATGTTATTTGATTGTTTGTAT
AATTCTTTATCTTTAGGAGTATGCTTTCTCGCCTGCAGCACAGGCAATTG
AACTTGGTTCTGGGGAGTCTCAGAAAGTAGTTTTCCAGGCTACTCGTGTT
GCTTACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTTTTCCCTAGTAATTATTTCTTTGTGGTAC
TTCTCTTCACTATTTTTTTCATAAAGTTGCAATGGAAGTCAACTTCTACG
CCGCTTTGTGAACAATAATTTGTATCTAACACCTAAAATGAGAACTTAAA
GATTGTGGAACCTCTGTGACAGTGTGATGGGTTCTGTTACTCTGTTATCT
GGGCAGCCCAAAGAAGGTGTTTTAGTTGAAGCCCGGTCAGAATCAAAAGG
CTATTATGAGGAGACCCTGACAGATTCATCAGGAAGTTATCGCCTTAGAG
GTCTCCTACCCAATACAGTCTATGTAATTAAAGTTGGGAAAAAGGGTGAC
CTTGATAATCAAATTGAACGCGCATCTCCTGATTCTGTTGTTGCGGAGGT
GAGTCATTTGTACACTTGAATATATATTATATATTTGTTATAACTGCGTG
AGTATAATTAATATTGTACTTTAGTATTTAAATTTTTAATCTAAGTAGGT
AAAAAATATAATTTTTTATTGAACTACTCTATTTTTCAAGGGTGCTGGAA
ATTTATAAACAAAGTTAGAGACATGAAGAGTATATAGACACCCATTGACA
CATGTCGCACGTCATGCATTCTATATATTCATCAACCAAATTATATGGGG
GTCTACTATAAACCAATATTTTAATATATGTATATGAGATTACCAGAGAG
TTGTTGGATTCCTGCACCGGCTGTGTATGGAGCAGCTTAAAGAGATAATA
GAAATGAAAGAGGGTTAAGACTTGTTTAGACACTATGTTGCTGATAACAG
GTTCATTTGTGAATATGGTTATCACTTATCACTCTGAGATCCATACTTAA
TAGAAATATGTGATTCAAAACCAAACCAAGTCCATTTTTAGATCAAATTA
AAATAATTGTTTTGGGTAGGGGTTTTGCATCCATATTTCCAGCTCAATTT
CCAGCTCTTACTAAAAGCGCTTGAAGTATTTTGAGTAAGATTATCTTTCT
AGTGGGCGTGTAGCCATGTACAACTCTCTCTATTGTTATCATATACAGTG
CGAGATGATTGACTCTTTAGCTACCCCCCTTGTTGCAGTATATTAATTTT
TGTGAAGTTACTTTTTTGCTCCTAACAATTCAAGTTTGTGGGTAAATACA
TTTTTTTGGTCTTTATGTTACAATCTACTGTTTGTCATTGAATAGGGTTA
TTTTGCATATGTTTTGTAGATTGGAGTAGGGGATATCAAGGATTTGAATT
TTTTGGTGTTCGAACAACCACACATGACAATCATCAGTGGTCACATAGAA
GGAAATAGAATTAAAGAGTTACGGGAGCATCTCAGGGTGGAAATCAGATC
AGCAAATGACCCATCCAAGGTTGAATCCACCTTACCATTACCTTTATCCA
ACTTCTTCCAGGTAAAAGATTTGCCAAAAGGCAAGTATCTTTTACAGCTT
CGATCTGTACTCCCTCCAAACATCCACAGATTTAAAACAGAAGTTATTGA
GGTCGACTTAGAGAAACATACCCAGATTCATGTGGGCCCCCTGAATTATA
CTCTGGTAGAGGAGCACCACAAACAGGTTGGTTATACCCTTTCTGCTCTA
CTGATAATAGTTATGAAGTATCTATTTTGGGAAAATATTGTAATTATTTT
TGTCAAGGACAATGGCGTTAATTAGATCATACCGGTCTCTTGTGTGTTTT
AATCGTCCAAGGTGTGATATTGTTCACATAGATCCTTTAATGAAATTATC
TTCTGGCCCTGCAGGAATTGACTCCAGCTCCTGTATATCCACTAATTGTA
GGAGTCTCGTTGATTGGTCTTCTTCTCGGCATGCCAAGGTAGATGGAATG
TTAATTTCCCATTCTAATCTCATAAAATTCAGCAAATTACTGATATATAA
TTCCACTGTTTGAAGATTAAAGGATCTATATCAAGGCACAATAGGAGCAT
CATTATCAGGATCCATGGCAAGTGCCAAGAAAGAAATGAGAAGGCCAACT
ATTAGGAAGAAGACATATTGAGGGACCCGTTTAGATCCAGATTTTGGCAT
AGAGATAGATCAAGGGTTAACACTAGTAAGACATTCTTCAGTTTCAAGTT
ATGCTATGAAGAACAATAGCTGCTTTTAGGTGAGGCCCTCTCAAGTTTTG
TACCAAGTGAATATATGAATCTTTATCATGTTGTATCATTCCAAATTATA
GTCTAACATTGAGGGCTTCTATATTAATAGTCCGAGATGAAAGTTGACAA
AAAGCATCAATGCAATTTCATATCTAATTAAGCTAATAAAAGCTGAACTT
AAATACA
Sequence Length:
19207
Sequence Checksum:
d526e02df8861cc1dc16896d5ad61174
View location in JBrowse:
Gene:
LOC108222957
Gene Biotype:
protein_coding
Gbkey:
Gene