LOC108223021 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

LOC108223021

Identifier:

LOC108223021

Cross Reference:


NCBI Gene	108223021

Relationship:

There are 3 relationships.
Relationships
The mRNA, XM_017397052.1, is a part of gene, LOC108223021.
The genetic_marker, MK006207 K3651, is located in gene, LOC108223021.
The mRNA, XM_017397051.1, is a part of gene, LOC108223021.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100	The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
XM_017397051.1	XM_017397051.1	mRNA	DCARv2_Chr5:36018360..36038978
XM_017397052.1	XM_017397052.1	mRNA	DCARv2_Chr5:36019145..36038979

Sequence:

ATAGTCCTAATATTTTATTTTTATTTTCACCGCCATCTACTAATAAAGTA
GAATATTCTCTAAAATAAATAGAATGATCCAGAGCTTAATTTGACATGAA
GTAGTTGAAGGTTTTAATTAATAGATTCTATGCTTCTCTCCTGTAATAAT
TGTATGTATCTATATGTATATAGGTTATATATATACACACATCACACGCA
AACACTACTAATTTCCGTTCAATTTAATTGCATCTAATTTGCCTTTTTAC
AACACCCCTTGAACAAGAATCACATGATTATGAGTTCTAAGCACGCCCTT
TTGTGATTCTTGATTTTTTCGAAATACCCATCTTTTAATTTCGCTTCTTG
GCTTAGTTTATCTCTGATTCTTGAAATTTGGAGTGACCCATTTGATAATT
TGATCAAACTAGTCCAGTATATTGTGGTGTTAGTCCATATATATGATGGA
GAAGAAGAGTGAGGAAACTTCTGCTGAGATGTTGAAGAACACCCCATCAA
ATATAAGAAGATTAGCAGATGAGATTGAGCAGTGTGAGGGCAGACAGAAG
TATCTTGCTCAGACATCAAGTGCTTCTGATGGGGGTGATGTTAGATGGTA
CTTTTGTAAAGTCCCTTTGCCCGAAAATGGTTAGTTCTCGGTTCTTGTTA
TTTTTCAAAGTTATGTGCTTATGTATCTTGTTTGGTAATATATGGTGGAT
GCATTAGTACTGGTTTAAGTGAAGTTAGTAACATTGGCGTTTGAGGATTT
AAATAGGGGGGGTCATATAATGAATCTGTAGGGGGGTCATATAATAAATC
TGTCGGGGGGGGGGGGGGGGTCTAAAANGGGGGGGGGGGGTTCATATAAT
GTATCTGTAACACTTTACCTCGAAGACCATTTTATGGACTTGAAGAGTGG
ATCATATCTTAATCATGATCACATGTTAAGTTACCAACGTCTGGAAAACC
TGAAGGTGTTAGAAGAAGGGGTTTATATGCACGTATAACATACTTATGTG
TTGATACTCCCTTTTATTCCAATACCATTTGTTGGTTTTTAAGAGAGAGT
CTATGATAGTAAATCCTGATTAACAATTGTGATATTGAAGAACTCTCTTT
AGCAGTTCAGCTTAACGATATGGCTAAATTTGAAGCGTCATAAGTCTAAC
CAGCATAGATAGAGCTCATTTTGCTGTTTGATGGAAGTGATGTTGGAGCA
ACAGTTCAGTTTTACTTTGAGCATTATAGTAGCTGTGTCATAACTTCTTT
GGTGGTACTTTTCTTGAATATTTCTTTCTGGTGTGGTGATAAGCTAGATA
GAAGTAAAACTTGGCATCAATGTTGACTTTGTGAACTCTTCGGCAGTAGA
ACTTGACATGGGGTTTTGTAGCACGGTAAAGTTCTAATTACCAAATAATG
TTGATAGAGGGTTGATATATAATCTTTGAATGTAAACTTGGATATTTACT
TAAAAAACTTTGATATGTACTGAAAAGAATTGTTAAATGTACATCTATCA
ACTCTGGAGACACTTGTAAGTTTATTTCGCTTCGTTAATTGTTTGGAGGG
TACACTATTGGTACCTTCCTTTTCACACTAAATGCTGATGTACTGAACTA
GATGTGCTTTACTGGTAACCACCTATAATAGGCTAGCGATGCAATTACAG
TCCAACTCCTTTTTTTATAACTTAGTTGTACACAATTATCAGAGATTAAG
CTTTTCCTTACCAAAGTCTTCATGATTGTTTGGTTCTTAGAGCTGGCTGC
CTCAGTTCCTCGTGCGGAAATAGTAGGGAAAAGTGAATATTTTCGGTTTG
GTATGCGAGATTCTCTTGCAATCGAGTCAGCCTTCCTGCAGGTAATTGCC
ATTTATATCATCTACATAACTAAACTAATAGATAGTGCTATGGAGGTTTG
ATATTGCTTTATCATAATTCTAGTTGTAAAGAACTGTCCATATATCAAAT
GATGAAGCTTTAGTTGTATGATTATTTCCAGAAAGAGGAAGAGTTGCTAT
CTAGTTGGTGGAAGGAGTATGCAGATTGTAGTGAAGGCCCAAGAGCGCCA
AAAGCTTCAAGCTCTAAATTAGATGCGCAGCTAAGATCATCTGTCTTAGA
AAGTGCTGGATCACCCCAGCTGTTCACACCCGAAGAAGAGAGAGTTGGAG
TTCCTGTAAAGGGAGGGCTTTATGAGGTATCCTTAATCCTTGTTATGATT
GTCAGCAATTCTACCAACACTAATGCAAGATCTTTGAGAACTTATTTGTG
TATACATTGATTAAACCTTCTCATATATACTCCCTCAGGCCTTAAGGTAT
GAAGAACTTTAAATAAATCTCTAGTCAGTTTTATGCTTCATGTTTATATA
TATTTGAATAGACCCGACAAAAAAATGTAGAAATGTAAAATGTTACAAAA
GAATATATAACAATGTTGATGCTTCAATATGGTAATTTTCACGACCCAGT
GTTGTTATATAGCTACATAAAAAGGTTTTGCTCAAATTAGCTGGAAAGGA
AATGATTGACAATCTGTTTGAAAACTTAGGATTTTTATGATTGTAGAGAA
TTGTAGAACCTGAGGAAAGTGGAAGGGAAGATATTATGTTACATATAACA
ATGTTCCCCAATAGCCAACAGCATATGTAACTCCTCTTTAGTGAGAGGAA
GGATGGGCAATCATTTGAACAATGTCATGATATTATTCATATTCAACTAC
ACTATGAATTAGAATTGGATTGTTCGAACTCCAATACCATGCTTAAATTT
ATGTAATTGGNCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAATGTA
AACAATAATTGAACAATTAAAAAAAATTCCCTTTTCAATCGTTTAGTCAT
GAGGTTTGACAGACTACATCATTGCTAATGCAGGTAGATTTAGTGAAGAG
ACATTGCTTTCCTGTTTACTGGAATGGAGAAGATCGCCGTGTATTAAGAG
GTCAGTGGTTTGCTCTTAACAAAGGTCTTGATTGGCTTCCACTTAGAGAA
GATGTTGCTGAACAGTTGGAATATGCATATCGCGGTCGGGTATGATTTAC
TGACTATACATTTTCTTTTGCAGTTCAGAGCTTTAATTAGACAATCACAC
TGTTGGTCTGTGATTCAAACTTACTAGCCTTATTTAAAATATGGACTTGT
CTAAATGAACTGACTACTAACAAGTGAAGTGGCGGCACCTGTATTGACTC
ACATTTAAAAGTGTTTCTACCCACTTGTAATCAATGAAGTATGTTTTTAA
TAATAAAATTCTGTTCATTCATTTATTTTGGCAGATATTACCTTCTTTTA
TCAATTCTTTGGGAATTGAAACTCAGTGTGTTCTTTCTCTTTGTAAAATT
TAAGGAAATAAGATGCTATTGGACCAATTGTTTCAGGTTTGGCGTCGAAG
AACCTTTCAGCAATCAGGACTCTTTGCAGCTCGAGTTGATTTACAAGGCT
CCACCTTGGTATGCTGGTTTGCAATATAAGAGTAAGCATTAACGTTTTCC
ATTAGCAATGTCTAGATGTTAAAATTAAATCCTACTGTTTCATGCAGGGC
TTACATGCACTTTTCACCGGAGAAGATGAGACGTGGGAGGCTTGGCTAAA
TTCTGACGCTTCTGGGTTTTCTAGTGCTTTCAATTTTGGGGGCAATGGTG
TTAGGCTAAGGCGTGGATATGCTTCATCCCAATCATCAAAGCCAACGCAG
GTATCTTCCTCTGTCTCTCCATCCCTAAACGATGTTAATTCCTATTCAGG
GAGATTTATTATTGGTCTTAAAGATCTAGCTCTTATTTATGTCGAATGGT
TCAGGACAGTTTGACTTGATGCTATTAGTTCCTGTGATGAAGGAATGAAT
TTTCAGTTTTAAAAAAAGTGAAACACCGATGAACGAATGAAGAAGGCTTC
ATAGTCTGTTATAACCCTTTTTTCCGAATCTTTCGGTCTCCAAGTCATTC
ATGTGATGTAAATTTACCTCATAAGGTCTGATTATGTTTTATACATGAGA
ACATGCTTCCTCTTCTATCATTTGCTAGAGCAGGGTTACAAAATTAATCC
TACTTTTAATATTATTGGTATTATCTCCTTTCCTCTTTGGGTTTTAGAAG
CTATATAGTTGTATTGAGACTTCTAATTTAAAAGTTTACGTGTTTATATC
TGTATGTGTTTGATTGATCATTTCTGTACATATGAAATAATGCTTAATCT
ATCTATAAAGTAACTACATAAAATCAAAGGCATGGACATGGCAACTAAAA
ATTAATTGAATCTTTTCAAATCAGGTGGCCACTTTATTTATTTATTATTT
TTTTGTTTCAGGATGAATTAAGGCAACAGAGGGAAGAGGAAATGGATGAT
TACTGTTCTGAGGTATCATCATCATTTTATTGTTATCACATCTTCTACAT
ATGCTATTCGTACATGATCATGAAGTATATAGAAGTTGCTAAGTTTATGT
GTACCTTCAGTAGTCCTTACCGGTTAAATTGTTCTAAACTTAACTTATAA
GCTGAAAATTGCTTTTATGTTTACCATCTAATTGGTCCTGGAATTTTTGT
AAGTACAAAAATATGTGCTTATGTCAGTTACTTATTGCATGTGTTTCACT
TAGAGTTTTTTCTGGGATATGTGATTTAGCCGAGTCGATGGATAAAATTA
GATGACATCTGTTAGGAATAATATACGAGATTCAACTTCTAATGCAAAGC
ACACACACAAATTATATGACGCGGAAAATCCACGTCCCAACTTGTATTAT
TAATTAAAACCGTAATCAATAATACAATCCAACAAACTAGGATACTCAAG
CCTACCAATGCTCAAGCATACCTATCAAACAATATGACTATGTATATATA
GCCATCAAACTTGGACAAATCAGAATCTAACTCTAATATACCTAATCATA
ATCCTAATCCAATTCTAATTTCTAACTCAAATCAGAATCCTATTCCTATT
GGGTTGATACCCAACAATCCTCCCCTTCAACCCAATACGGTTTCAAAATC
TTTTAACGATCACCATGAAGACGTTGACGTCCATCCGCCAATGCCTCCCC
TTGAGTAACAACCTCTCCATCTAGCATAAAAAGATTTCTCTTATCCTTCC
AACCTTTGAGTATCACCAATTCTTGTTTGGTGACCTCCAAACAACCGTTC
TTCATCATAACAGTGCATCCCAAATCAACTAATTTACCCAATGAAATTAG
ATTTCGATTTAGCTCCGGTACATACCTTACTTGAGCTAATTTTCGAATAC
GACCATTATGAAGTTTCATTGTTATTTCACCAACGCCGGTAACTTTTATC
GTTTTACCATTTGGTAAAGCTATCATCTTTCCCTCACAATCCTTATAGGA
CGAGAACCACTCCCTCCTAGCACATATGTGATGAGAACATCCCGAGTCAA
GTATCCATTCTTCTTTTGATCCCTTGTCTTCTTGAACCAAAAGAGCATCA
TCAACCGTCTCAACAAGCGCAGCACTACCCTTCTCTCGAATTTTCTTCAA
CTCCTTTAAGTCTTCTTTTGCTTTCGGACATATGAATTGATGGTGGCCTA
ATTCTTCACAATAAAAGCACTTGATATTAGGGTTATGTTTCTTATCAAAC
TTCTTTTTCTTGTTATATGCATCCATCATAAGTGCACTTCCGTCCGATGT
ATCACCCGATCCTTGCTTCATCAATCTTTCAGCTTCAAGAATAACAACAG
TAGTCTCATCCAAAGTTAACTTCGTTTTTCCAACCATTAAAGAGGTAATC
ACATTATTATACTTATTTGGTAGGGAAACAAGTAAAAGAATGGCTTTGTC
CTCATCCTGTAATTTTTCATCCAAATTATTCAGCTGGTTGATCAACCCAT
TAAAACGATTAAGATGATCTCTCAAATCTCCGTTTTCTTCCATCTTAAGT
CCGAACAAATCTTTCTTGAGAAACAACTTGTTGGCCAAAGACTTTGAGTG
ATATGTCTTTGTCAACTTCTCCCACAAATTTTTAGGGTTATTCTCCTCAA
GAACATCATACTTGATTTCCGGTGCAAGAGCCAACCGGATAGTCGACGCA
GCACGTAATTTCATATCTTCCCACTTTGTATTATCCACATCAGCGGGCTT
CTTATCCTCGAGAGTTGCATATAATCCTCGTTGAATTAACAAATCTTTCA
CTGTGCTCTGCCATAAAGTAAAATTGTTTCTGCCATCAAACAATTCAATC
TCGAATTTTCCTCCCATCTTATCCATCATGAACCTGGCTCTGATACCACT
TGTTAGGAATAATATACGAGATTCAACTTCTAATGCAAAGCACACACACA
AATTATATGACGCGGAAAATCCACGTCCCAACTTGTATTATTAATTAAAA
CCGTAATCAATAATACAATCCAACAAACTAGGATACTCAAGCCTACCAAT
GCTCAAGCATACCTATCAAACAATATGACTATGTATATATAGCCATCAAA
CTTGGACAAATCAGAATCTAACTCTAATATACCTAATCATAATCCTAATC
CAATTCTAATTTCTAACTCAAATCAGAATCCTATTCCTATTGGGTTGATA
CCCAACAACATCTCCTTATATTACTAACGTAGGAGTAGAACCCTAAAACA
AATCCTTATATTCAGCTTAAAAGCAACAGATCGGCTACCTTAAGGCTTTC
AACCACAAAAGGCTCCCCGAGAAAAGATGATGGATTGCAACCATTAAACA
AAGAAGGCTCAGTTTAATATTCAATAACATTTAAATAATCAAGTCTATAA
TATGCAGGGATCACCTCACCTATGTGCATATACAAACCCATAAAAGGTAT
GCAGCAAATCGTACAAAATCTTGCTATAAAATTATTATATTTTTTTCCAA
CAAAAGTTTATATATCTGTATATACACAGAATATTCGTAAGAAAGACTCG
TTTCATTGTTTTGTATCTTTATTTTGTTTATTGTTACGTATCTTTATTTT
GTGTTCTTTAAAGAATACTCGAGTTCCGTCTGTTTTCTGGGTTTGGAAAG
GTGCGGGATTTCAAGAACGGGAGTCTTTTGATATGCTGGGATTATCGTAT
GATAATCATCCGCCTTTGAAATGCATCTTAATGCCTGAAAGTTGGATTGG
ATGGCCTTTACGTGAAAAATTTGTTACTCTTGTTATAGGTTCCAGTTCGA
CATGTGGTCTTTATGGTCCATGGGATCGGTCAAAGATTAGAGAAATCTAA
CCTAGTAGATGATGTTGCTACATTTCGCCAAATTACAGCAAACCTAGCTG
AAAGGCACCTAACTCGATACCAACGTGGCATCCAACGGGTCCTTTTCATC
CCATGCCAGGTAGACACTTATTTTATATATATTACGAGTTTACTTGGTTA
TCTTATCAAATACACAAAGTGTACTTCACTGCATTCCTGCATAACTTCAT
CACTGCATTCCTATTTAACTGCCTTCTCAGTTATCCAGTGTAGTATACTT
TGGTGGACATCTGAAATTTTTATATCAGAACTGGGATGAGGTTTAACTTG
ATATAACTTGGGAATGCAGTGGTGTAATCAGTGATGCATGCATCCATATG
CCTATTCTTACTAGACACGCTATCACAGCCACTCGTTTTTCTGGTATTTT
TTGATTTTTGATTTTTACTTTTATGACTGACAAGCATGGTTGGTGTCTCT
AATTACCAGTGGAGGAGGAATTTAAAGCTCAGTGGTGAATCTGCTGTCGA
AAAAATTACTTTAGATGGTCTAAGGGGGTTGCGGGTGATGTTGAGTGCAA
CTGCTCATGACATACTATACTACATGAGCCCAATCTACTGCCAGGCTATC
ATCGACTCGGTACCTTGTATATATATTTCCTGTTATTTCTTTTTCACCAA
AGTTCTATATATGTCATAGCCTGGCACATTTCATGTAGTGGCTGTTTCTT
TTTTGCATGGATTGACAGTGAGACAAATATTACTTAAAAATACAAGCACC
TTCTGTTTGTCACGTGAAAGTTAATTGGTATAATTCTGACAAGTACAGAT
CAACTGTCCAAGTTACCTTATTGTTAAACTTAAATCTCAACTGATAGTGT
TGCCCATCTATGAAATGATATATGCTACATATAAATATTTTGATGTGTAT
GTTCAGTACTCTGAATGTTTTAGCTGTATGAAGGAAACTGTTTTGGCTTA
TCTATAATGTGGTTATGATGAAGTTTGAATCATCACACCATAGGATATGA
CCCCTATTTTCATTATATGTTCAACAGTACATGGAGGTGAAACTTGATTA
GATCTTCAGCTAAAGCAATTGGAGATGCATCCATATATCAGTAGAATTAT
TTCTTTCTCTTTTTGACAAATAATCATTTCCTTGGGCATGAAGCCATTAA
GTGCTAGCTGTTTCTCGCTATGTAATTCATTTTCTTCATATTTATATTGG
TATTTTTTATGGCTTCTCTTTAGTACTTACTGCTTGCATGTTAAAAGTAA
TATTACATCATTGAATATTAAGTGTGAATGGAGGACTTTAAAACTGTATT
GTCAAGCTTCTAAATATTAATGAGTTGAAGTTCGAGAAAATAATTGTCAG
TAGCACTTTCGAGATGATAATAGTGGTTCTGTCTTCAGGTCTCGAACCAA
TTAAACCGCTTATATTCAAAGTTCCTCAAGAGAAATCCGGGTTATGATGG
AAAGGTGTGTGCGACTTTTTATGTGTATATGACATTGCTTCTATTTTCCT
TATTTACTTTTACATTTAGCCGTTAAGTTATGCTTAAATATTTTTCTGAC
ATATTCCTTTTTGCAGGTTTCTTTATATGGTCATTCGCTTGGAAGTGTAC
TTTCCTATGATATTCTTTGTCATCAAGACAATTTGTTGTCCCCATTTCAT
GTGGATTTGGCGTCAAAGGAAAATTTGTACAGAACATCATCTAATGCTAA
TGTCGGAAAGCAACATTTTGAGAGTGGCTCTACCTCCAATTTGGGAAAGG
ACATTCTTGTGAAAAATGAAAGCAAGGGTATGGAGGATGCCACTGATGAA
GGCATGCTAAATGTTAACTCTGAATTATCATCTGTGGAGGATCTTGCCAA
TTCTGCCCCTGCTATACCTCCGGTATCATCAGCTGATGAACTTTCGCCTG
TACCTGTGGGGTCTAAACAAACAAATAATGACTCGACATCAGCTGATGAA
CATTCACCCTTGCCTGTGGTGTCTAAACAACCAGATGATGACTCACCGTC
AGCTGATGAACTTTCACCTGTACCCGAGGGGTCTAGACTACCAAATGATG
ACTCAAAGTCAGATGAAATTCAAACTAATTCGGTCTCTGGTAGACTCGAG
GGATCATCAGATGATGAACATTCACTTCCACACGTGGAGTCTATAGAACC
ACATGATGATTCGCCATCAAATGAAGTTCATGCTAATTTTGTCCCTGCTA
TACATTTAGTATCAGCATCTGATGAAAATCCACCTGTACATGTGGGGGGG
TCTGAGCCAAATGATTACTCACTATCTGATAATAATATCACTCCACCTAT
TCTTGATCACTGTAGCATTCTAGCAGACGTAAGGGATGAATCAAATAAAT
CTGAAAACAGAAATAGTGATTTAGCAGAAGAAAAGGATGGGATCAGTGAA
AATTTAGTTGGCTGCTCTATGGGAAACACTGCAGAAGTGTCTGAGAACAT
TGAAGTGAAGTCAATTGATGCACTGATGAAAGAGGTTATGATATTTACAT
TTTATGTGACTATTTATTTACGCCTAGTTTAAATAATTTATACATATACA
GATTGATACCATAAGTCTTGATATGAAAAACAAGAAGAAAGGGAATGATA
TTCTTAATTGATAAGATTAGACATGCTTCTCTTTCTCTGTCTGTGTCATC
TAACTTTGCCCTTACCCATCCAGATCATAGCCCTACGGGATAGAATTAGA
GAACTGGAATCTCACACTGGGGCTAAAGGTACAGATCTCAGTATTAGATA
ACCGAGGTTTTCATCTTAACATAGATTCATGTGTTTATTATCTTTTGTCT
TTCGGGCGTTTTAATTTGTTTTACCAAGTTGCTTGGCTGTTTGAGTTTTT
ATACCGTCGTCACAAACTTTCTTAGCGGATCTTTGATCAGGAGCCGAGAA
GGAAACATCTTTGACTGGTCAACCAGCTTCTGAGAAGCCTCCACCTGGGA
AGAATATTACTGAGAAGACTTATACACATTACATAAACTACACGAAGTTG
AAATTTAAGGTAATATTCTTGTAAAATAGAAAGCACTTGTGGGTGGTGCA
CCATTGGAAGTATGTGATTAGGATTACATGTGTATCTCCGTTTATATAGT
GTCAGCACCTAGCCTGAATAGTCTGCAACATTTAATCTGTACCATACATC
TTTAATATCATGGTATATGCGTCAAATCATTATATCTTTGCAGCCTGTTA
TATCTGTAAGAAGAGTATATGTTATCTACTAAATTTATGCTTGATCTGGT
CTGTTAGCTTCAATAGTTCCAACCATATTAAATTATTATTAGGCTTCACG
TGTATGTTTGTCTAAGTGATTTTTTTATTGTCAAATACTACTAAGCATGT
AACTCCACCTTGACGGAGGCGGGGGCTTTCATTTCTTGAAAGTAGAAATT
GAAATAAATAATAGTTTCCTAAGGTAGTTTAAAGAGTTGAATACAAAGTG
TGCAAACAGTAATACTTTCTTGAAAGTAAGACATTGTTCACCATTTTAAC
CATTAGGTGTTTCTGTTTTCTAATTATAGACACATCTGGAGGGATAGCTA
GTTGAGTTTAGATGTGTCCCTTGTCCCATGCATCCTGGACAGAGATATAT
AGCTAATATTGTCCTCTGATTTGTATTCCGGGGAAATATGTATTACTTGA
CTCCTGTGATGATGACTGGTACTGCATTATAACATTATATTTGTGATGCT
TCAACATTTATTTTTAAGGATTAGGTTTTTAGTTTAAAAGCAGATCGGCA
AACAGTAGTCAATATGGATATTGATAGATAACCTCAATTCTATGCCACTT
ATGTCAGAGTAGAGTGTGGATGTCATAATGTAATATTTGTTATCCTGAAC
TGAAATGTTTGTTCAAGTATAATAAACATAAAAGCGATAATTTATAACGC
TAAAGTTGTGGAACAAATATCAACATGTAGTTTCGTAGTGTGGGAATGGA
CACAGTAGTTTGTGGAGTCCCTTGAATTTTATATAAATTACAACACACAC
ATTCAGTAAATAAAGGTGACTGCTTCTCTCTAGTCATTTTTTTGATGAGT
TGAGGTACCTGTTTCTGCATTTTGGTTTATTATGTAATACCATATTGGCG
TATCAAGTTCTATATAATCCATCAGATATTTCATTTTCTTCTGAAATATG
TCACTCAAGGATTATTAATCATCTTATTTTTCTGAAAATCTAGGCAGTAT
AAAATATAATGGGTTAATTATTCCAAATCCCAAATTTTTTATGCATGAAA
TTAAACATGTCTAGAAACAGTTCCCTATCACCTGTCCTCATCAGTCTTAA
TTTCCTAGCCAACGCCACTAATACTTGGTATAAATATGTATGCTCCAATC
TGCATGCTATGGTACCTTATTTCTGCTTGCATGCTAGTTGCATACATTTT
TCTAATTGCATGCCAGATACATTTTTTTACAAACTGCTCTAACTTACTTT
TTTGTTTCCCTCTATTGAGCCGTAAAGAATGATGCATACAAGTTTCTTCT
ACACCTGGCCTTTATCTGCCAGGTGTGATTTCTTACATAATCTTTGAAAG
TATCTGCCTATCACCTTATTTTGTTTTTCAGGTTGACACATTCTTTGCCG
TTGGATCTCCTCTTGGTGTATTTCTCGCCCTCCGAAACGTTCGTTTAGGA
ATAGGTAGCAGTAATACTTATTTTCCCTTATAGCAGATATGTTTTTTCCT
TGGTGCTTACACGATGTTCTCTGAACGAACACACACACGCACACACAAAC
ACATATGTATGTATGTGTGTGTGTGTCTATTGTGCTGGTTATGTTTCATT
GTGTATTGTAACTCAACCAGAGTAGTCTTTCATGTCATAATCATAATAGC
CATCAGAATCAATAGAAGTCATTTTTTTAATATTTAAATTCTGACTTTAT
TGAATATATAATTTTTGTTAATGTTATCGTTAAACAATTAGATTATGTCG
AGATGTTATGACTTCCGCAAAATTAAAGAATCCAAGTCTTTCAGAACTGA
ATTCAATTATATGGATTTTCTTGGTCTGTGTGTAAGTTATGTATACAAAT
AGTATTCTGCTCCCAGTGAGAACCAGAGAAGCAAATGTCCTACACATTTA
CCAGGTGCTATGTACTAATAACTTCGTGTTTATGCGCACAATTTTTTTTT
AAACCTTTAAATTTTTAATTTTACTAAACCAACTCAGTCTTTACAATAGC
AAAATATCACCTGTAGTCCTGGACATTTAATTCCAAAAAATGGGCAGCCA
GCATATAAACGCGAGGCTCTAGCCAGTAGCCATGTAATGAGCGAGAATTA
GCAGAGCTTTTAATGTAAAGAAACATTACTTAGGGATGCAAAAGCTGTTT
ACAATCTTCAATAATCCTTCAAAATCAGAGCACAAATCTGCATCATTACT
TATATACAAGGTTATTATGGTAATAAGTCGAGCCTCGGCGCCCCGGTACC
TTGGAATTGATTGACAGGTCATCAGACTAGTTGAAAAAGGTCGACAAGTC
GCGACATACATACATCTTTTAGTCATTCAAAAGTATATATAAGAATGTAG
AGATATTTGTTGTATGCAATTTCACACTCTATAGACCTTATTGTTTTGCA
CATGGTATTACTTCTCTGAAGCACGTCCCATTGAATTATTCTTGTTTCTT
TTACTATTGCCTTCATCCTAAGCAGCAGCTTAAGTCCTAACTCCTAACCC
CTTTAATTTTTTTCTCTTTGTTCAGGCGAAGGCCATGATTATTGGGACGA
GGACAATATAAGAGAGGAGATGCCTGCTTGCCGACAAATGCTCAACATCT
TTCATCCTTTTGATCCTGTAGCATATAGGTTTTTCCTAGTCTCTATTTCT
TTAATTATATACTGCCATCTCTGTGTAAATATGCATGTATTTGGCGGTCT
TGAAGTTTCAGTAGAGCTGCTTGATATCATGTCTCTTCCCATGTCCCTGA
TGTGTTTTCTTAAATAGAAATTGTGTTTGATTAATGTACAGAGAAAATCC
AAGTGACTGATAATACTGGTATGTAGTCATGCCATCACATATCTAACTTG
TATCCCAATTCACCTGTTCCAATCCAATCAACATATAGGTTGCGTCATTT
TACTATGGGTTGTAGGCTTAATGATAGCTCCTGTTCATTTGAACTTAAAT
CTCTAAAAAATAAATTCGGCCTTCTTTCAAGACTCATTTAAGATGAATTA
TACGTGTTGGTTGGGATGGATCATGCAAAGGAGAGATGAGCAGGAATTAT
ACAAGTCTAGATCCTCTACTGTCTTTAAAATGTACTAGTGATATTATAAA
GCTAGTTCGTGAGATGCTAGAGCAGACCTGATCCTATATTTGGCTTCTTG
CCCATTACTTAAAGCCGTTTATTACCTCATGTCTATACTTAGCAAGGCTT
TACATCGGTTCTGTTGCTTTAGTCATGTCAAACTTTATGTTATTCTTATG
TACTTGACCGCCGGGATTGAGTAAAATAGATAATAGGGTTCTAATTTCAT
CTGTATGGACCATGTCAGGTAGTTATTGTAGCTATTCAGTATCTTGGGCG
GCATAATGACTTGCCACCAATTTTGTTATACTAATGAGCATTCCTTTAAT
GCTAAAAGGTGCTGGTATTAGGCTGTTGCATAGTTCCTTTTTCAATTGTA
TGCTCCAAACATTCTAGCTAGGCTTCCAGTGGCTTTTAAACTCTACTTCT
ACTTTTTTTTACCTTGTCCTGCCCAATACCTGCGTTATGGTTATTGGTTA
ATACTGGTTATCCCTGAGCAATATGTAGTAAGGTTTTAATTTTTTTGGCT
ATAATGTCACGGAGTCCATATAGTACATTAATTGCATAAGCATATAAAAA
TCTCTTACGGCACTTTGCCCATAAAATAAATTTGTAAATTTTAAACTTTC
TGTTATGCTGCTATTACTGCTGTTTGTAAAATTACCACACTAGATATTTC
ACCTTGTCCCTGTGCACACTTTGACCCTTAACCCCAAGGCGTGAACGCAT
ATGTGTCTCAGTTGTAAATAAGTACATCTAGTTGTTATACTGATGAGCAT
TCCTTTAATGCTAAAAGGTGCTGGTATTAGGCTGTTGCATAGTTCCTTTT
TAAATTGTATGCTCCAAACTTTCTAGCTAGGCTTCCAGTGGCTTTTAAAC
TCTAGTTCTACTTTTTTTTACCTTGTCCTGCCCAATACCTGCGTTATGGT
TATTGGTTAATACTGTTTATCCTTGAGCAATATGTAGTAAGGTTTTAATT
TTTTTTGGCTATAATGTCACGGAGTCCATATAGTACATTAATTGCATAAG
CATATAAAAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT
TTTTTGGCTATAATGTCACGGAGTCCATATAGTACATTAATTGCATAAGC
ATATAAAAATCTCTTACGGCACTTTGCCCATAAAATACATTTATAAATTT
TAAACTTTCTGTTATGCTGCTATTACTGCTGTTTGTAAAATTACCACACT
AGATATTTCACTTTGTCCCTGTGCACACTTTGACCCTTAACCCCAAGGCG
TGAACGCATATGTGTCTCAGTTGTAAATAAGTACATCTAGTTTTTGGACC
TTCTTGGTGGTTTTGTATCGTATTGGTTAAAGCTCTGACCACTAGGCAGA
CACCACTCTGTTTTGCATGCTGAGCCATGACCCCGTGTAACATTCTGTAT
CACTAATAATCAGAGGAGTTTTTGAGTTTTTCAATCACCAGTGTCATTTT
CCCGATGCTTCTCCTTTAGAGAAACATGTATGTGAACATTTTATGTAAGA
TGAGGCTGATCCTCCATTTAGGAACAGTTAAAATAATACAGCTCATATCT
TACATGCAGCTGATGTAATTTTTGTTTTGCAGGATAGAACCACTTGTGTG
TAAAGAATATATTAACAGAAGACCCGTCATTATCCCATACCACAGAGGTG
GAAAGAGGTTGCATATAGGATTCCGGGTAAGGTCTTTTACATTTAAAAGT
GGCATTTATCTGTTTGCTGTTGTGACCTCAATATGCTTCTTACAGGAATT
TGCTGAAGAGTTATCTACACGTTCTCAAGAAGTGTTTGATCAGATAGGAT
CCATAAAGGTGGGGTACTGCTGTGAAAAATAATTATTATTGGTGTCCTTT
GGTCTTTGTGATTTGATTACTTATGTAGATAGTTCCATTGTCGAGTCGCC
AATGTTTATTTAAAAATTTAAGAACCTACTAATAAAACTTATTAAAGGGG
TTGTATTGTATGTACATGGCTCCAATAGTGTAGGACCGATTACATAATGC
AGTTTCCTTACTGCAGTTACATTATGCTTTGTCATTATTTTATAATCATC
ATCAAATTACATATATCACGAAAATCTACCTGACTAATGTGAGATTTTAC
CTGACTCGTGTTAATTTCTGTCAACTTATATGACTAGATCCTTATTTGGT
CAGCTGTATGATGACGTAGATTGACATCCGAACCAACATTTAAAAACATA
TTAATGTGAAAGCACGTTATCTAATATTCACCTCATTCATTCTTCAAAGA
TTACCTTCACTAACTAAGTTTTACCCATTACCCATGATTCAGACCTATTC
GTCACGTCTTGGCGTGTTTGATTTTGATATATGAGTGAGTTTCCTGACTA
CATTTTATTTGATTAGGTAAAAGTGGTCACACTCTGTCAATCGAGGAACG
ATGATAGCAACGAGGGTAAAAAGAATGCCTAAACACTCATTTTCAGTTCA
AATTAAAACCACTTGATCTATGGTGGCCTTTAAATTAACAGGTGATCATA
TTAGTGTCCTGGTTATTTTGTTTATCTTTCAGAAGAATCAGAAGTTACTG
AAGAAGAGAGGTCTTATGGTTCATTAATGTTGGAGAGATTAACAGGTAGC
GAAAAAGGTCGAGTTGATCATGTGCTTCAGGTATGTTTCATTATCTACAG
GTTTCTAGCACTGTAATTTTTTAACATTAAAAGCAGTGCATATGTGTCTG
TTCCCTAACAAATACATGCGACATTGTTTCAATTTCATTGTAGAAGCATG
AAAGCATCTACGCTCTCTATATGTGGCCTTTTTACAGTCCATCCTTAACA
GTGCTTATGGTACATTAACATGATAGCCCAAAAATCAGAACACAAAGCAC
TAACACTTTGGTTCATAGCAACATTGAGTAATTATTGCTTTAGGGTAGGC
TTTTACTCTCTATCTCCCCAGTCAGTGGGTCTAGTTTTTCCATGGCAACA
TCTGAAAGGCCACTGAAGCAGGCGAAAGGTTGAGAAGGTAGAAAAAAGTT
GAACATAAGAATGACAAGGCATATAAACTATCCTCGCTGTAGAAAATCAA
ATACTCCCTCTGTCTCTCTCATTTGTTTACAGTTTTTTTACACTGCTCGA
CACGCATTTTAAGACGCATATAAAACATAGTTCCATAACTTGTTTTCAAA
AATATTCTTTTTTTGTATAAAAATTTAGATACTGAACTTTTATTCAAAAG
AAAAAAAAGTTCAAAATAATATATCAAGTTATACTTTATGAGAGCATTAG
AATGCGTGCCGAGACTGTCCCCCAATATAAACAATTGTGGGGGACGGAGG
GAGTATATATCTTCAATTAATTCTAAAATCACTTATAAGTTTATGTGAAA
AAATTATCAATTACAATGTTGAAATTGAATTAGTTTAATTTCCATGTGGT
TTCTAATTAGGCTGTTAGGCACACCATTTGGATGATCATTCTCCTGTTCT
ACCTGTTGTACTTAAATTTTCTGTGCGGTTAAACCATTTTAGTTCCATCT
CCCCAATTGTGCTAATTTTTATCCTGTACCACTTGTATTATAGTTTTTCA
TCGCTATTTAGCAAGAAACTGACGCATAAATGTAATAAAATAGGAATTTG
TGAGTACTGATTTAGCAATTTCATTTTTGTTTTTGCAACAAAATTAGAAG
ATTGCATTGCAGGCGTCCAATTTGAAGTCATTCTGCTGAATGTTCTACTT
GATTTCTGTTCATTCTTTTACTCACGCTTTAATTATGCAGTTACTTCTTT
ACACCCTTATGCTTGAGTTCAACTAATATATAGTCATGACCGCAACCTTA
TTATATAATTTGATGCAATTAATATTAGATAGATACTGTGAAGACAGCAA
TTAGCCTGTGATATTTCCATGCCACTCGACTGATTTTGACAAGACATTCT
ATTCTGTGTTTAATGTACAGAGCTTCTGCTTAATTCGCAAAATTCTTCTA
ATTTTATGCAATTAATATTAGCCTGTGAATTTCCATGCCTCTCGACTGAT
TTTAACAAGACATTCTGTGTTTAATGTACAGAGCTTCTGCTTAATTCGCA
AAATTCTTCTTATTTTCTGACACTTTTCTATGCTTGTCTCATTGTCTTTT
AATTTCCTTGCTCTTTCCACTTTAAAGCTCTCCACTAAACAAAGCGAATT
AACATATAGTTGGGTAGGATAAGATCCCATAGTATAATTTGATTGTAAAT
GAGTAATAAATATCTTGCTGCATTTGACTTTTGCGCTCATTTTGGTGTAA
TTGTGCAGGACAAAACATTTCAGCATGCATATATATTAGCAGTTGGAGCA
CATACGTAAGTATTAGTTATTTGAATTGGCAAACAAAAATATGCCTCCAA
CTGAGAAATGTGATGTTCATTAGTTGAGGAAACTATGATACCTTGATGTG
TCTGGTGCAAATAACTGAAACATCTGAGGTCCAGTTTTGCACATTAGCAA
CTGAAATAGTGCTTACAAGCAATATTGTGTTATAATTAATAATCTCACAT
AGTTTATGATGCTACAACTAGAAGAGTTTCCTGTCTAAAGTAGCATTGCA
TCTTGTAGAATTTTAGGATTTGTTTACTGAATTTTATGAAAATTACTCCA
CTGGAACCCAACCCTTTATAAGGAAAAAAGTTACAGCGGATCTGTTAAAA
TTCCATTCACTTGATTTTATTGTGCACTAGTGTGGCCTAAATATATGGAA
GGTGTAAGCCAATGTCTTATACATGATTTTGATTCTGTGTCCGCATTGAG
TTGATATGTTGTATGCATGAGGTATGCAATTTTGCTATTTATACATCTAC
AGTTTAGTTTCTGGCAGATTGTTTTATTTTTTTCCCAGTCAAAATTGATC
TGAATGATGGAATGACAAAAGCATCTTGGTCTAGCAGTGTCTCACTCCCT
TCATACGAGGTTGAGGGTATATGATCGATCAAAAATTGATTATTGCTCTT
TAGCGAGTATAAAACATTGATGCATTTTATTATTTCTTCTCTCCTGAATG
TTGTGACTGGCTTTAAATTAAAATGCATGCCTATGTGGTATCAATATTAT
ATTATATATTTTGTTACTAAAATTTGGGGAAAAAAGTTTATTTGACATTT
TGTTACTAATTTGACCCTATGACAATATTCCTGTAGTTTATTTACTATCT
TTCTTGATTGTTTTTCCACAGGAATTATTGGAGAGATTATGATACTGCGC
TTTTCATGTTGAAACACTTATACCGTGATACACCAGAAGAACCAAGCTCA
AGTGTTGAATCTGATGAGGAAAATAGCTCAAAACATAGAAGCGCTTCAGA
ATGCTGGTATGACCAAAGAGAGCTTGCTGATGAAGAACTTCCTCTAACAT
TTGCTGATAAAGTCTCAGTGAAAGACTTCTGCCGAAAAGCCAAAAGAGCT
ATTAAGGGGTGAAAGCCACCAGGTTTATCATGATCATGTAAAGGACATGC
AGCAGGTGCTGGTAAGAACTCAGAAATTGCAAATCAGTCCAGTTTTCGGA
TTATAATATTATAAATAAATTTTGTCCGACTTCCAGTTGACAGGTTCCTT
GAGTGAACCGAGATGGTCGCACTGGAATGCTGACCTTTGACTATCTTGGC
AACCCAAAAGCGATGTTTAAGCATTACTTACACGGAGTGTTTTAAAGCTG
TACACTGAAGAAATTATTGAGTAAATAGTGAAAGCTTCACTTGGGATATA
TAGATGGGCTGTGAGTAGATAGTTTGTATAACCCCAGTTACTGAATCTGG
GGTGGTCAGTGAATGATGAATGGCTTCGAAGAAGAGCCAGAGGGACATTT
CATATTATGCATCTGTAGTTCTCAGTTATTCTACCCCCTGTGTGTACATG
GTTTGACGTAGGAAAGAGCATGTGAAACTAGGATAAATGTGATTAAAGCA
TGTACTGTTTACATAGAACACAAATCTGGTTCTCTGTGAAGTCACATTTG
CTTGTAGCCAATTTTATAGGTGGGACACATAGTTTTGTATGTAAATGGCT
CGACAAACTTTTGTCCATGCTATTTATCTCTGCTTGGGTATGTAATTTTG
TCCATGCTATTTATCTCTA

Sequence Length:

20619

Sequence Checksum:

838411bd50b03029c5e41548b20b9596

View location in JBrowse:

DCARv2_Chr5:36018361..36038979-

Gene:

LOC108223021

Gene Biotype:

protein_coding

Gbkey:

Gene