LOC108227217 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

LOC108227217

Identifier:

LOC108227217

Cross Reference:


NCBI Gene	108227217

Relationship:

There are 3 relationships.
Relationships
The mRNA, XM_017402255.1, is a part of gene, LOC108227217.
The genetic_marker, MK003308 K0752, is located in gene, LOC108227217.
The mRNA, XM_017402256.1, is a part of gene, LOC108227217.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100	The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
XM_017402255.1	XM_017402255.1	mRNA	DCARv2_Chr6:3832660..3845696
XM_017402256.1	XM_017402256.1	mRNA	DCARv2_Chr6:3832660..3845696

Sequence:

TATCATTTGAGAGATCTAAAAGAGGCAACCCGATTCCTCAACCCGTTTGG
TGGCAAAGTCCATAGCATATAATCCCAAATTCATTCCCCTTCTTCTCCTC
GTTCTCTCTCTAATACTAATATATATAGGTTTTTATGCTCTTCGTATACT
CTGTGTGTTGATATTTATTAATTCTATTCAATCGAGGGCTAGGGTTTAGA
AAGCTTCTATCTCTTTAATTTGATGGAGGAAAACGATGATAATCTATCCA
ATAAATCTCGGCTTATTGATATTGATGATACAGTAGATACGCTAGAGCCC
AAAGAATGCGATGTGGCTGGTGAAAAAAGCAGCGATTTTGAGTGTGTTGG
TCGTGAAATTGAAGAAGCTGAGGCTTCGATTCCTGTGACCGAATCGGAAA
ATCTGTCTGAGAATTGTGTGGAGCTGGAAATTGATGGTAAGTTTAGTGAC
GGCGTGGAGGTGGAAGCCGGGGAATTGGAAAGGAAGGATGAGTTGAGTGG
TGAAATAGAGGTTAGTGGGGTCGGTGTGGATGCGAGTGGAATTGAGGTAA
GAGATGATAAGGATGATGAAATTGAGGGAGAAGTTTTGTATGATACTGTG
CGAGGAGATGATAAGAATGATGAATTAGAGGGAGAAGTTGTGGCGGAGAA
GAAAGATGAATTACAGGGTAATTATGGGTGTCAGGTTGCGAAAGAGGGGG
AGGTAGAAGGTAATGGTGTCGACGAGGGAGAGATATTGGGGGATAATGAT
CAGGTGGAAGATAAAGATGTTTGTGAGGATGGTTTTGACGATAAGCAAAA
TGTTTGCGTGCAGGTAGTGGCGGAAAAGAAAGATGAATTGGAGGTTGAAG
GTGGTATGAATGTGGGAGAAGAAGCGGGGGATAAAGTTGTGCCCGAGAGT
GAGATAAAAGATGAGGCTGGGGTTGAATTACAGGCAGGGGCTGTATGTGA
GGAAGTGAAAGCGGAGGAGCTTAAAGGTGATTGCGGAACTGAGGTAGTCG
GGGAAGCTCTGTGTGAGGTTGGCAATGAGGCTGAGAACAAAAGTGAGATT
GAGACTGAGATGAAAGTGAGTCGGGAGCCTGTTAAGAATGTTGATGATAT
GGTGGAGGAGGAGAAAGTGGAAATGGGATATGTCTCGAGTCAGTCTCTGA
ATGAAGTGGAGGAAAGGGCTGCTAATATTGAGGATAATGCAGAACATAGT
TCCGGTTTAATTGGTCTTGCCGAAGATACAGTCATGGAGGAAAAGAATTT
GGTAATGGAAAGTGTAAACAAGAAAAGAGATGATGAGTTGGATTCTGCTC
CAGAGTCTGATGATGAAGAAGATATAATGGAAACTGGAAGAGAATACGAT
GAGGATAAATTTGAAGGAGAGGTTCCTCAACCAGATGGTGATTCACAGTT
GGCTGAAGATGAAGAAGATATAATGGAAACTGAAAGAGAATTTGATGAGG
ATAAATTTGAAGGAGAGGTTCCTCAACCAGATGGCGATTCACAGTTGGCT
GAAGATGAAGAAGATGAAAGATTGGTGGGGGACGAGGAGATTCCCGCTGC
CGATGTTGAAATGGAAACAGAAACTGATGCAGGTGAATTAGTGAAGATCA
GTGGAGGGAAGCGGAAGAGAGGAAAGAATACAAAAGCTGCAGGAAAAGCT
CAACCACTCAATATGGTCGGACTTCCGGTTGAGGAGGAGGATGTTTGTTT
TGTTTGCTTTGATGGTGGAGACCTCGTGCTGTGCGACCGAAAGTATGCTG
TTCTTTTAATTATAAACTATTGGATTCTGGATGTTGCGTTCCCTTTTTAA
TATTGTTTATCAAATGTTCCATTTCTGTCAGGAACTGCCCTAAAGCATAC
CATGCTTCTTGTGTTAATCGTAATGAGAAATTCTTTCAAGCCAAGGGTCG
TTGGAATTGTGGTAAGTTTCATGTGAACTCTTTTGCATTATTTGCATAAA
CGAATAAAAATGAAAGCATAGTAGAAACACCTTTAACGTCTTACTTGGTG
TCGGGCCACTTCAATTATTATGTGAAAAGTTAGGTCTGTTACTTGTTTCA
CTTCTTTTCTCTGCAAGCTTTCTGTTACTTGATTTGATGGGTGTGAGTCT
TGCCAATACTTCGACCCTTGAAAAGCAGAAGTCATAGGAATTACACATAC
AGCAAACTGTGTACATTAGATGTGCAAAAATGTTTTGTTAACACCTGCCT
TCTCTTTATGCAAAGTGTAAACATATATGCTTTTTGCAGGAAAGCAAACA
TATTATAATTAATCTTGCTGATAGGGTAAAATGCAAAAACCATTGGACTT
TTATATATTAAGAGGGTAAAATGTTTTCAAAGTTAACTATAGTAAATTTT
CCAATATTTACTATTACTTAGGGCTGATAGCTATTGAACATGATGTGTAT
GTAACATAGTTACATACTCTGCCCTCTAAGATGAAAGAGCATTTCAGCAT
CTCTAGTCGTGGTACCCTTTGGGGGTGCAAAACATTGCCAACTTGCCGAA
AATTATAATATTTTTCCCTTCTCATCCATGTCAAATGTGAAAACTTTTAG
CTCTAATAGTTGGCATATCATGCAAGGTACCTAAATGATCCCCACATTAA
CTATCATATTAGATCATTAAATATGAAGAGTTAGATACAATAAAAGAGGC
CAGATTGATACATTCATTTTGTTCAAGAATAGAGTTTCATCCATTTTGAG
GGGTGCAAAAAGTTAACCACTTCTTTTGGCACCCTTGGAACTGCAATAGG
TGGCACCCAAGAGTGCCATGCCATATAGATTTGGCACCCCTACTGGAGAT
ATGTTCTGATGTGCATGTCCGGTGATATTAGCTCTCGTCTTACCTTTGTT
TGGACATCGAATTAATACTTGGTGTAATCCCCCCCCCCCCCCCCCCCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCAAATTATCTA
GGTTTTTCTGGGCCTTTAGGTGCTCAAGTTTTTATTTTGCAACGATGACA
TGGAAACATTTTACCAGATAAATATCCATCCATTAATTTGGGGTAAAAAA
AAATATTATTAGTTCTGGACCCTTAAATTTTACAACTTTAGACATCTTAA
TTTTCTACTTGTGCCATACCAAAAGAAATAATAAGAAAAAGGTCTTCGTA
AATACTCAGTAGTATGATTTCACTGTTTCGACAAGAATTTTGTTGATGGG
TGTCCACTCTAAATTTTCAGGTTGGCATCAGTGCAGCCATACAAACTGTC
AGAAAAATGCATACTATATGTGCTATACATGTACTTTTTCCTTGTGCAAA
GGATGTATTAAGGATGCAGTCATATTATGTGTTAGAGGAAACAAAGGCTT
TTGCGAAGCTTGCATTAAAATTGTGATGATGATTGAAGATAATGCACAAG
GAAGTCAGGTACTCACTCGTTCTGCTGATATATCTATTTCTATTGGATGT
GGTGGTTATGGACATTAATTACTTTCCTTTACCAAGTTGAAGAATGATTT
GGTTCCTGCAATACATTGTAGTCTTGCACGCTAACTTCTTGTAAGAGACA
TAAGGAGCATTCTCAAGAGGAGCTATTTTGGTTTTTACAAGATTTGGATT
CACTATAGATTTAGACTATGTCTTCTTATATTTTGTTATATTTTGAGATG
AATCATGTGCAATTGTATGCCTATTACTTGATATTGGTGTATAGTTTTTC
TATATTAGCCATTTACAGAAATTTAGTGATCTTGTCTGGATATTAAAAGG
GCTGCCCTAGAATTGACAGATAGCAGAATTTCTGGTCAAAATTTGCAATG
CATTGTAGTATTGCACGCAAACTTCTTGTAAGAGACATAAGGAGCATTCT
CAAGAGGAACTATTTTGGTTTTTACAAGATTTGGATTCACTATAGATTTA
TACTATGTCTTTTTATATTTTATTATAATCATGTGCAACTGTATGCCTAT
TACTTGATATTGGTGTATATTTTATCTATATTAGCCATTTACAGAAATGT
AGTGATTTTGTTTGGACATTAAAAGGGCTGCCCAAGAATTGACAGATAGC
AGAATTTTTAGTCAAAATTCAGGCATCTAGTTGTAGCGACTTTTAATGTC
TGTCCTTTTTTAATATTCTTGTTTTCTCTTCTCTGTTTGCACAGGCACAA
ATTGATTTTGATGACAAGTCTAGCTGGGAGTACCTCTTCAAGGATTACTG
GATAGATCTTAAAGAAAGTCTGTCTATTTCTCCAGTTGAAATTGCTAAGG
CTAAAAACCCATGGAAAGGATCTGCTTTAGGGGCTAGCAAAAATGAGTCT
CCTGGGGAGCAGCTTGACACAAAGGATGATGTTGGTGTTGGAACTGATAA
TGCCTCTGATAATCCTGAAGCGAGTAAGCCTAAAAAAAGAAAGTACAGTA
AACGTCTAAAGTCTCGTGCTACTAAGCAAGATGAGTCGACAAGTGAAGCA
ATAACAGCTGGCGCGGAAAGAAAGTCTACACCTAAAAGCACCGAATGGGC
ATCAAAAGAGCTTTTAGAATTTGTTATGCACATGAGAGATGGGGATAGAA
CTGTTCTATCTCAGTTTGATGTTCAGGCCCTATTGCTTGAATACATAAAA
ACAAATAAACTTCGTGATCCTCGTCGAAAAAGTCAAATCATTTGTGATGC
TAGGCTTGAAAATATATTTGGAAAAGCTCGTGTGGGACATTTTGAAATGT
TAAAACTTCTTGAATCTCACTTTTTAATGAAGGAGGATACACAGATAGAT
GATGTTCAAGGTAGTGTTGTTGATACTGAAACCAACCATGTTGATGCTGA
TGGGAACATTGAATGTGTGATAAAAAGTGGGAAGGATAGGAAACGTAAAA
CACGGAAGAAAGATGGCCGGGAACGTCAATCTAATCTTGATGATTATGCT
GCCATTGATATTCATAACATTAGCTTAATATACCTAAGAAGGAAGTTGAT
GGAGGATCTACTGGAAGATATTGAAACCTTTAGTGACAAGGTGGTTGATA
CTTTTGTGAGGATAAGAATTTCTGGTAGTAATCAGAAGCAAGACATATAT
AGGCTAGTCCAAGTCAAAGGTGATTTTTTTCACTATTTTCTTAGACTTTG
TGCAGGGTGTGCACATGATATCGTCATTAAGGGGCAAAATAAATTTTTTG
CAATGCAGGTACGACCAAAGTAGACGACTTCTATAAAGTTGGCAAGCGGA
CAACTAATCTGATGATAGAAATTTTAAATCTTAACAAGAAGGAGGTTATA
TCGATTGATAGCATTTCAAATCAGGAGTTCACGGAGGTAAGCATACTGAG
AAGAATATAATGCTAACCAACTTATTTAAGTTGTTTGTATGCTGGTTTAA
TGATAATGCATCATTTTCCCTTTCTTTTTTGTATATAAATGTTATGTATT
ACAATGTTACCCATTACATGATTTACTGTTAGACAATGTATGAAGAGGCT
CCCTACTCTGACGTTTTTTTTTATATATATTGAACCATGTTAATAAAGGT
GGCACTTATTTCGAAAAGAAAATAATGATCTGTAAAGTTCTTTTTGTTAT
ATTATGGATTATGATTATGTTAGCATACACGTGGTGTATTTTAAGCCAAT
TAGCTGATGTGTATCATTCTTTGTTCTCCAGGACGAATGCAAACGTTTAC
GCCAGAGTATAAAGTGTGGGTTCATCGCGCCCATGACGGTGGTAATTATG
CACACCAAATTTTCTTTAACTTTAAATTCAATACATGCATTCGGCTTATT
CTTGTGACACATTTTATGTTTGCTTGTAGGGTGCCATTCAAGACAAGGCC
ATGGAAGTCCAGGTTGCAAGAGTAAATGATGTAAGTGTTGCTCATGAGAA
CTAATAGTTAATGTGATGGTTATGTCACTTGTGTGTCTGATATTAGTTTT
GGGTTTTGGGCTGTGAGTGAAAACTATGTACATTAAGTTAGCAGCTTGAA
AAAAAGAATTCCTCGTTGTAGGAATTATCCAATTAAATTATATTTCCTAT
TTAGGACACTGACTCCTGTAGCAGCCTGTTATCACATACTTCTTCTATGA
AAATATGCTTTCGTATTAACTTAAAAGCTTGAACTGTTAGCTCATTGTTT
GTGGCCCTAATTCCTGTTCTTATTATGTTCCTTTATATTTGATGTTTATT
TTTTAATTTTAAGATGAAGCATAGAATGTAATTGGGTTTCCAATATTCTT
TATGCACCGAGATTTTATCCTTGATTTATTTATCACGTTGTTTTTAAAAT
TTGAATATGCACATCTTAAATGCGTAAATTAGAGCACATTATGGCTGAAC
GGCTTAAAAGTTAAGTTGTACTCCCTTTGTCCCTGTTTAGTTGTCCCTTT
TGACAAAAATAAAGTCCCTGAACAGTTGTCCTTCACATATTTCGGTACAA
TTTTTTACAATTTTTTTCCAAAACAACCCCTACATTTCTGTTGTCTATGT
TTGACTATACAACTAATTATACATTCCTAAGCTATCATTTAATTCAATAA
TTAGGGGCAACTATGGAAACAAGTCATGTATTAAATTTTTCCTAAAATGT
GTGATTTCCTAAAACGTAACAACTAAGTAGGGACGGAGGAGGGAGTATCA
GGAATTACAAATCTCCTCATGTATCGAAGTCCTTATTCAAATGGACGCAC
TATTGGTAATGACACAGGGTTATTCCGGTTTGTCATAGCTTCGATATTAT
ATCTTTCCCTTGTATGAATGTCGTGGAACGCTCTACCACATGTTCCCCTG
TCTCTTTAGGTTTGCTATGTGATCTTAGGATCTGTTATATTCTTCGTTCC
GAACTATTGTATATTGGTACCTTGTGAATATAGTAGTAGGTTTTTGCTTT
GTTTTAAGATAAAAGTGATTGGTTGATGTGTAACCGGCTTTGATCCCATG
GTTCATTATATATTGTTTTATAAAGATTAGTGATTTTGATGATATTATAA
ACATGTCGATGAGCTCTTTAATTCCAGACTAATTTGATTGGCTTTTGAAC
TGAGAAGTGGTCAAGTGATATAGTCTGTGCAGTCAGCAATAACGCGTTAA
ACTTGTTAAGATCTAGCTCAAGTTTCACATGTTAACAAGCTCAACTCTCA
TGAAGACTAACTTCTGGTGGAAAGAGAATTGGTAATGGGTCCTATGGTAG
TTTAGGTTTTAAACCAAACTTAAGTACCATTTAATTCAGGTTCGAATCGG
ATACCTAGAAATGAAAATGGAACCTGAACCACTGGGTTTTGATTTAGGTT
TAAACTGGATACCTCCCCAAAATTTATTACAAATCAAATAACCAATTTAT
CTGAAGTATAGTAACAGAATCGGAAATATGGTAACAGAACAGAATTACTA
AATTTTCTCAATTTTAGATATTTAAACTTGGAATTAAGGAAGGTAAAAGG
AAAAATAATACATCATGTTATATCCATACGAGTATATTATTGAAGCCGAA
ATATTAAAGGTTTGGTATTCGGTCAGTCTGTCGGTAATTATGCCGGATTA
GTTTGTTGGTGATCGGGGTAATTAGCTGGATTAGTCGGTCGGTAATTGGG
TCTAATTAAAATAGTGATGATAAAAATATAACATTGTTTAGTTTTTTTTA
CAGTATTCCAGTAAAAAAACATGGGCTTTAAGTAATAAAGATGAGTTACA
ACTTAAGTATAACTAATATTTTATATATGCTCAATGCTCAATCCAATTGA
ATATTTACTTTTTGACTTTATTTGATTAACTCATACCACATTTATGTATA
AGGTGGTGTCAAGTATAATCTCAACAAATGTATTAGTATTGTATAAAGTA
CAGATATTGTTGATAATTATTAATAGAATTAATTTGGTCACATTTGGTGA
TGATTCACATTTAAATTCTTTTTAAATTTTCCGTATTTAATTTTTACACT
GAAATTGAGTTGCCTACATCAAACAAAATATGTTGGTGATTATAAATGGT
GTCAAATATATTGAACTAAATATTTATAATGTTTGTAGTTTTTAACTCAT
TTAGTATATAAACTTATGTAAACTGTAAAGACATTACTATTAAGAAGTTG
ATCTGTAAAGTGTTGCACTTGTGTTTGAAACTAAAATTTGAGTTATATAT
AGATTTATCTAGATAATTATCTTACTAGTGTATTTGTTTTACAAATTATG
TGATAGTTATCGTATGTATGGATGTATATTATACATTAAAGAGTAAGCTC
ACTTATGTGTGTTATCAAAGAATAATGTGTGTCATTTCATACCTTACTTA
AAATTTTAGGAAAATATGGACGCATCCAAAAAGGACAAAGAGGTGATAAT
ATGGCATTTTCAACCTTCATTGTGTATATATATGTTCTTACTCCCCTTCC
TCCACTATATGCCCATTTAGTGTAGTATATCAGAAATTGATTTCATGTTT
CCTGGATTACAATCGATGTAATTTTCTTTGCCCTTTTCACGCGAAAGGTT
CTAAAATAGCCAAATTTTGCTTAGATATATAAAACCTAGAGGTGCATTCG
AGTTGCTTAACGGAATGCTGACAATTGCCCGTGTGTCATATAGTTTCTTT
GTCCTTGTCTTAAAAACAATTCGTTGTCAAAGCTGTATACGAGAACAATA
TTTCTGTCTTTACATATTGCTTGCCATGCATTAATATCAGGATTTTAATA
AACAGATGGAAGTTACTTATCTTATCACAGGGGTGTGTTTAGAGGAACAT
GATACTAGAAGCATTTACCTTTTTTTCTTTTGGTTAGAATTAGGAGTGAG
ATTAGAACTAAGGTTTTTCACATAATCAGTCCTGTGATAGTTATCCGGGA
GGCTCGAGTTAATTGATCAATAAGCACAACAGTCTACTTTTTTTGGAGTT
ACTATTGCCCTTGCCAGTGTTCTTGTTTTGTGCTGTGTTATGAATTTGTA
AGTTTTTTATTTTCAAGAGATAAAATGATGTTTGTTTAATTTATAAAGTA
AGAAATTTTGTGGATTCAAATACATCTCATCTTCTAAAATTAGTGCGGGT
TTAGATATCTTTGAACTCCTAAATGATATAACTGAAGTACAAGTTTCTTC
GTTGCTTGATTTTTGCTGTTGGGAGTTGGGACTGCTTGTATACCCATGAT
GAATATTTTATTCTCTTTGTTGATTCTAGTTTCAGCCTGATAGTTACTCT
TGTTAAATTATATATAGTACAGATATCTACTAATAGAAATTATGTATGAG
GCAGTATCTTTATTTAATATAATTTCTTACTGTCTACTTGTCTTGAACCG
GTAATACCTAAATGCTGAGTTCAATACAGGGATCTTCGCCTGAAAATTTA
GCATCTTATAAAATCATGCCTTTTGACTTTTCAGTTATCTTTTCAGTTAT
AATGTTTTAACACTTTATACATAAAACTGCTCCTGTATGTGTTATTTATC
ATGCTCAATTATTGTGATGCAGTGGCTTGAATCAGAAGTACAGCGGCTTA
CTCATCTTCGTGATAGAGCAAGCGATTTAGGCAAAAAGAAGCAATATCCT
TTGCTGTCATTTTTTTTCCTTCTGCAGTTTCAGTTCTCTGTAGAATGTCG
TATAATCAACTTGTGGTGTAGGGCATAAAATTTTTCTTAAAAAAAGTTTT
TGGTAACCCGAAGAGAAGGGATTCAGTAAAGACAAATTATTTTAGTAGTA
AAACTTCACATCGTTGGTTGTTAGTGTCATTGTATCTTCCTGTGTGGACC
ATATTTGAACTGTTGTAACTTGTGATCCTTAACTGAATATTACACTCAGA
GAGTGTGTAGAGAGTTTACAGCTTCTGAGGACCCCTGAAGAGCGTAGGCG
TAGACTAGAAGATATTCCTGAGATACATGCAGACCCAAAGATGGACCCTG
AATTTGTGTCGGAAGATAATGATAGTGAAATTGACAGTAGTAAACAAGGT
TTGGTCTTCACTTGGTAGTCTGATGTGACAATATTATACTGTACTGTTTT
GTTAAAAGTTACTTTTTGTTTATTTAGAAATATATACGAGGCCCAGAGGT
TCTGGGTTTAGCAGGAGAGGAAGGGAGCCCATATCTCCTGGAAGTGGTGA
TGCGAAAGAATCCTGGACTGGTAGCAGGAGAAGTTCTGGTAAAGGTTGGG
AACTTAACAGAAATTTGTCGGATAAGAATCTTGCAAATACAGTTGAAGAT
GCTCCTCTTAGTATTGGAGTATCTGCTGATAACTCATGGAATAATGGTAG
AGGCAGCGAGACAGAAAAACCTATTATATTGGAGAAGCCAAATTCAGTTA
CAAGTTCTGAAGCTTTTGGATTTAATAGAAATTCTGCTGCTAGATCTGAT
TCATCCTCTCATGTACAATCACAAAAGTCTCCTGCATCTTTGCTTGCTCC
AGTTGCTACAGCTCCATTGAACATCAGTGAAATAGACAAGATATGGCATT
ACCAGGATCCACATGGAAAAGTTCAAGGCCCGTTTTCTATGGCTCAGTTA
CGTAAATGGAGCAATACCGGATACTTTCCCTCTGATCTCAGAATATGGAG
TAGTTCTGGAAATAAAGATGATTCTTTGCTTTTGACTGATGCATTGGCTG
GGAAGTTTCAAAAGCTGCTCCCAGACAATGGGATTCCAAATAGTAATAAC
CTGCATAATCCTCATCTCCCACCCTTGCACTCTTTACATCAAGGGCGGGA
GGTTCAAGATGCCGAGAAATTGAACTCTGATCAGAACCATTTTACCATGG
ATTCAAATATTAATTCAGCATCAAGGAATTGGGCTGCTCATTCAGTTGAG
ATCCCACTACTTTCTGCAGACGGGACAAATTCTAATCATAATGGCAGAAA
CAATTTGGTAAATCTCCCTTCCCCTACCCCAAAACAAAGGTCTTCTGGGG
AAGCGGGCCGTCCTATTGGTGGCGTCTCTCTACCTGGTAGCATTGAAGCC
TTGCAGTCACCTGCGGCAGCTACCCCAGATAGTACCAGGAACTTGATGCT
GGCATCTGAGAAAACTCCTTCAATTTCTCATCCTGCTTTTGGGGCATCAC
CTAACCCTGAACAGGGTAATCTTCTAGGCTCAACTATATCTCTTCCAAAT
CCTCAGTCAACTGTGGCTTCATTGCATGGAGGGCAGAATGTCAGCCATCC
GTTTATTGCACCTGAAACTAATGCTAATATCGTGCAGTCTGTCACTGCTA
ACAACCCTGCACTTGGAACGCAGAATTGGGCTGGTGCCCCTACCCAGAGT
TTGGAAGCAAATTCTTCGATTCAAGCATCCACCCAACAGCCGGTGTACGC
TCAGTGGAGTGGGGTTCAATCAACTCCTGTGCAGAATCCATCTATAAATT
TTCCAGTGCAAGGTGTCCCGCAGGTACCAAACTCCTGGAGGCCTCCAATG
CAAACTAATCAAACTAACATGCAGCCTAATGTCCAGTGGGGAACGGGAAT
TGCAGACAACAGTGCTTCTCAGAACTTGCAACCTGATAATCCAAATTCTG
GTTGGGCTTCAATGCAAGTAAGTCCGAATATAGGATGGTCAGGACCTAAT
CCAAACATGAACTGGATGGCTAGTGTTCAAGGGGCACAACCTGGGAATCT
GAATGCCGGCTGGGTTATACCCGGTGGAAGTTCAGGAGTTGGTTTTCAAG
GGGCAGTTCCTGGAAACATAAATTCAGGTTGGGTTCCTCAACCTGGCAAT
GCCGTTGGCGTTGTACAAATGCTTGGTCCGATGAATGCAAATCAAGGCTG
GTATTCAAATATGGCAGCCAGCACTCAAGGTGCAGCCCCTGGAAACGGAA
ATGCAGGTTTGGCGGCACCCATCTCGAATCTAGGATCTAATGTTCAGGGA
CAAATGCCAGGAAATGCAAATACAGGCTGGTCAGCACCATCAGGAAATGC
AAATCAGGGTTGGGGCCCGCTAGCAGGGAATCAAGGGAACAACAGAAGCC
AGCACCATCGCATTGGTGATAAGTTCTCTAGTCAAAAGGATCAGGGTTCT
CAACCAGGTAGAAATTGGAACAAGCCGTCATCATTTGGAGGTGGAGGTGG
AGGTCCTAGACATGGCGGCTCTAGAGGAATATGCTATATGTTCCAGGACA
CAGGGCATTGCAAGAGAGGAGATTCTTGCAGTTTCCGGCACTCATTATGA
AATTTCATAGTATATGTGATAGGGATCATGTACATTAAATTTCAGTTTAG
TGGGGCTTCCAACTCTGTTTCTGATAGGTTTTTTGTTTTACAAAACTAGA
ACTTTGTGTGCTATAGCAGCAAATATCAACGCCCCCTCGTTTTGTAGTAG
CTTAGTTTTAAGTTGACCGGTCTTTAGTACATTGGATTTTAAAAGATGCA
ATAACCAGTTGATTACTGCTAGGTAGTTTTGTCTAA

Sequence Length:

13036

Sequence Checksum:

d13f96bef45f92984045388cfc5fe2ee

View location in JBrowse:

DCARv2_Chr6:3832661..3845696+

Gene:

LOC108227217

Gene Biotype:

protein_coding

Gbkey:

Gene