LOC108227836

Resource Type: 
Gene
Organism: 
Daucus carota subspecies sativus
Name: 
LOC108227836
Identifier: 
LOC108227836
Cross Reference: 
NCBI Gene
Relationship: 
There are 2 relationships.
Relationships
The mRNA, XM_017403203.1, is a part of gene, LOC108227836.
The genetic_marker, MK003130 K0574, is located in gene, LOC108227836.
Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
Transcripts: 
Transcript NameIdentifierTypeLocation
XM_017403203.1XM_017403203.1mRNADCARv2_Chr6:4313564..4332593
Sequence: 
GTAATAATAATATAGCAAAGGCCAAAGGGGAGGATTGCAGAATGCGGAAG
GGAGAGGGTGAATTAGGGTTTGGCGGCACGGTGGAGGAGGAAGGGATAAA
GATATGGTTGATGGTAGAGCACCTATGTGGGGAGATTAGTCACTCAATAT
ACAGGATAGAGCCCCCTACAGATGCCGCAGACTACGAGGAGAAACAGATC
GATTCAGATGGACTCATGATAGATCTCGTATCTCCTCTCATAACCATCGG
TAATGAATTTGAATTATTAGAACACTGTGCTATGGTGAAGGTAGGCTCTC
TTATGTACTTTTTTGGGGGTGTTTCAATTGGTCGTGTTTTAAGTAATGAT
CAGGTAAAGCTGTGCGTTAGAATTCTAGACATAGAGCACCCAGAGCTAGG
CCTCTACTCTGCACCATCTCTCAATGCCCCCAAGGAGAGACCTTGTGGTT
TCTCCGCTCGGGGCATGGTTTACGCTCTAGGATCTCGCCTTGATGTTTGT
AACTCTAAATTTTTTCTTGATGATGGCAGTGTTGCTACGGGTATATTCGA
GAGGTACGACGTATATACCTAAACAAATGCCTATAAATTAATTAATATAT
TATTATTTCTCTTTTATCCCCCCCACAGGTATGACCCTAAAGCTCACAAG
TGGCAAGTCCTGCCTGACCCACCCCTGCCATTCGGCAAGACGCCGAGATT
CGACGAGATAACTTGGTGTGATTCTGCTACAGTCATAGCTGATAGGTATG
TTTTTGTGGGGAATCCGGTGCCGGAGTTGTATGTCATCTTTGACCTGGAT
GTCGGCAAGTGGGGAACTCCTTTTCCCGAATCCTTCATTTCCAGCCACTT
CCCCTATGGTTCACTCTGTGTCGATAACTCCCTGTACTGTCTCACTGGTT
TTGGCACATATAAGTATGGAACTCAAGAAGAAGCAAAAAGCAACTGGCTT
GATGAAGACGAACAAGAATACGAAGAAGACTACAGGTTACAGATTATTAA
AAGAGGTCCTCTCTATGTGGAGGATCCCAATAGGTTGCTTGAGAGCCATT
GTTTGCGCCCTGAAAATAAACAGCTCATGACTCGTTTGGAACCGCCAGAT
TTGTTGGATGAGTGTAATTCCTACGAATGGAGAGAGCTATTGCACTTGGG
GGGGCCCTTTTTTTGCAATATCCTCACTTCCGAGCTCGGTGAAACATTTT
GCCGTGGTGTTTGGATTGATGTTTTCGAGGAGGTCAAGATACCTGCTTCT
AAATCTACTCATTTCCGGACTTTAGCTTCATTCTCCTACAAAATCCGCAC
TCCCTTCCACAATAGTGGCTTTTACGTCCGCTGCTGTGCTTTTGGCTCGG
TTCCAGACTGTATGTCCTCTATTTTCCTCCTTTTCTCTGTAATTATCTTA
TTTTTTTGCAGTCTTATTTTGGCTATTGATGCGTAATTTACTTGGTAACG
ACAACCACTGTGTGCTACTTTACCCCTCGTATTGGGGCTTAGGCTCTTTT
TTCCCTACTCTGTCAAAAAATTAAAATTTACACAACTAGGACCCAAGTAA
GTTTACCTGTGAGCGACTATGCCTAAAACACACTATCAGCTTATATAGCT
ACGAAGTATAATTTCTATTGTTACACTTATTTGAGTTTGAGCTAGTAGTG
TACGGTTTAAACTTTTAAGTTTTCAAACTATGTGAGCTTTTACAAGATTT
GGTGAAGCTGAATAGGATGAATGACTCTGGAGCCTCATCACTGCAGCTAA
GTTTATTAGAAATCCTATTTTATATTTATATTTCATTGTCATATTAAGTA
TCCTTTATATCTCATCTTCTGCTAAGTCTATTAGAAAAAAGTTCTTGTAA
AATTATCCGTTTTTTATTTCATTGTCTATTATTATTTGCTTTTAAAAAAA
ATATATCATTTTGTTCACACTGTTACACATTCTTTGCTGGAAATTGCAAG
TCACGGGCTTCATTGTAGTTCATGTCATTGTATAATTATATCATTTCGTG
CATTCTTTGTACATAGCCGTGTATACTTTTACAACAAAACTACTTTCATC
AGTGTGCGTGTGTTGGTGTAGTGGTTCAAGCTCATGGCTTTCCTAAGGGA
GGTCATGAGTTCGAATCTGGATGTGGCGTGTGTTGTAACTATCAGAAAAA
AAACCCTACTTTCATCAACAATGAGCGGGGCAGACGTTAACTTGATATAA
TGGTAATTCCTTTTTTTTTTTTCCTAAGAATAGTGTGGGACTTTGTTTTA
TGATTTTTAGTACCCCCTAAGTATCCCATTTGGCCCGATTACATACTATA
CAAAGCAGATTATATTATTACCTAAAAAAAAGATTATATATATATATATA
TATATATATGCGTGTGTGTGTGTGTGTGTGTGTTTTGGTATTTTTTTATA
TAAATCAAGTGGGGTCACTTCTCCCCACTGCATCCTCCACTGACTAATAT
ACTTGTACTGTACTTGTCTGACCCCAATTTTTTTGGGAAGAAGGCTTTGG
TGGCGTTTCTGTCCTTTAGTTGAAATTATCAGTCTATCTTCTTTTTATTA
GTCTTCCCTCCATGCATTGGTCATTGGGTCTCTTCACTTGATAGTCCACT
TCATATCTTATTAACGCCTGATTGATTTTTGCTGCCATTTTACGTTTATG
GTGTTTGAAGGCAAGAATGGATTTTTTTGCTACATCAAAAATAAATATTT
AGTCTTTTTATTTCAGTTGTTCCCCATATTATTGTTTAAAACACATTTTA
ATATGTGAATGTCATGAAGTCGCTTAGTTGAGCATTCTTGCTATATTTGT
GTTTTTCTTCATTATTGTAGTAAGAGTCAACAAACTAAAGATAGTAATTT
GAAGGAAATAACACTAAACATAAAGAGATTTTAAAGGGTATAGAATGGTG
CAGAGATTATGAGAGAGACTTTTAGAAAGAGAGAGTAGAGAGATAAGAGA
GAGAAGTTGGTACGATGATATTCCATATTCCAACAGTAATGCCTAATGAA
ACTATACCACATTATTGAATCAGTATATCCCCAAACTCTGGTAAGACTAA
ACTAGCGATTGCTATGATAATAATAGACTCATGAGTAATCTATTGGGATC
TTGACATTTCGTCCTTCATCAATTTATTCATGTTATCATGGATTTCTGTA
CTGGGAGTAATGAACCCAGCAGGATTATAAACATTGTCCTCAAAACTTTT
TACAGAGGGCCCTTTTTTATGTAGTATGAGATAGGTATATTTGAACCACC
CACTGATCCAGTTGTGTTTTTGCCTAGGTTCTCTGTATTCAGAATACACA
AACTTTGGTGCCTCTTGATCAATTTTGATATTAAAATGCTTATAAACTTG
TTTACCACTTAAAGTTACTTAAAGTGAAAAATTAAAAGCCAAATTTTTCT
GTATGACCAATTTTATTATTTTGTATAAAAAATATAAAATTGAAAACAAT
ACAGATGAGTTGTACATACAGATGACAATATTAACTTTTGTCAAAATAAA
TTTTAAAAAAAGTTAAGTTAGTTGAAAAAAGCACTTCTTAGTTTTTTTAT
TTTTGTTAAAACTTTTAAGTCATTTTTTATTTATTACATATACAGACATT
TTTTAACTTTAAGGTTAAAATCACTTTAAACTGGGCCTTTAAACCCAACC
AAACACTCTTATAGGTTGTCCCTGTACAATGGCTAGTCCCATCTCGAGTC
TTATTTGTGTGCCACAAATAGGTTAAAGTCAGTACTCATGAAAAGTTTCC
AATTCACTCCAATGCAAGGTTCTACTTCCAAGTAGGACCTACTTATTTCA
TTTTTATGTTCTATATTAAAATAATATGGTACTTCAACTATAACTGTAAT
CACATATTTATGTACAATCCAAATATACTTTTATTCTCATTTCATGACCC
TTCCACTATTATAATATAATTTATAATTAATTTGAAAGATTCGATGTGTT
GATTGAGTATCCTAATAAGAAAGGTAAGCTTTGACCAATTTGAAGGAAAA
TTGCCCCATTTGTCAAAGGGGATGTTCTTTTATATTTTCTATTAAATCCT
TCTAGAATATACAAAATTCTCAAAGTTAATATTTTTTGTAGTATTTACTC
TAGAATTACAATTTATTACTCTTTTGTCTTTAATTTGTGCATTATTTTTC
TTAGATATTTAAAATATACAAGTGCACTAAATTTAAACTACTCAATAATT
ATTTTGTGTTATAAAGTTTAATTTATGTTAATACCCACATCAATCGGTGC
AAGGCTCCAGTTTCACATGTGTTTAAATATAATGGTATTTTTTTCCCTGT
GTTGTCTGAAGTTTAGAGGTGTTCCAAAGTAACATCACTTATCTGTAATA
TGTTAAAGTTATTTTGGAGAATGCATAGCCTCACATGTAATCTACTAACA
TATTAACACAGAGCATATGTGGATAAAATTACACTGAACTTGTATATTTT
GCTTATTAACTTATTGGCGTTGACTGAATGATCTTGGTCAGTTAAAAAAC
AGATAAGAATGACATCTTTGATAAATTGGTGTCTTAGCTTGTGTCTACAT
AAAACAAATAAGGATTTCCACGGGTTTGAAACAACCTGTTGTTTCTTGCT
TTCCTGGGAAACTAGATTACCCCCAAAAATACCGAATATCCTTTGCCGGA
TCGCTTACCTGCAAAATTAGCATTTGAATATGCTAATAATTTTAAATGTC
TATGATTATGAAATAGTATACCTCTTCCAGGAGAGCACCTTTAGATATTT
TAATATTTGAATCACCGCTTTCTAGTGAGGTACTCATGGAGATGAAAGGA
ATTAATGCACTACACTCTACTAAAAAGTTATGTCTCGGTGAGTAACTGTG
TGGTGGTGGTTGAGCTTTTCGACCAATTTTGTGATCCTCAAATAAATCAC
TTTGTCAATTTTTGACTGCGATCCAGGGGTGAATTAAGCTGTTATGCTTT
TAACAACCTTGTTTTTTTGAACAATCTAAGACATATTCTCTCTACAATGA
ACTTTTTTTGAATACTCGATTCTCCCAAGTCTTTAGTCTCAAACTTGCAC
CAAAAAAGATTTGAGAGCTTGAACTTCTCCTTGTCTTTTCCAATTAAACT
AACATAATCAACATAGACAAAAAAATATATTCTACCCGACTGCCCTCTGA
AGTAACATAGAAGGATCATATATGCAATTGTTTTGTACCAAATAGTATTG
TAAAATGAGGAGTTGCGTGAGCTTTTTAAGCATATAAAGTAGACATGCTC
ACGGAATAAACAGGAGATTCGAAATAAGTGTATATATATATATATATATA
TATATATATATATATATATATATATATAAGATTTAGAGGCTTGAATACAC
TTACGGGAAGATCATGTTGAGTATACTTACGGGTACCAACTTATCTATAA
TCTTGAGTTGATAATAAGAATGCCGCCTTAAACTGCTCATATATTATTCA
AATAAGGAAAATCCACGGGTTTGAAACAACCTGTTGTTTCTTGCTTTCCT
GGGAAACTAGATTACCCCCAAAAATACAGAATATCCTTTGGTGGATCGCT
TAACTGCAAAATTAGCATTTGAATATGCTAATAATTTTAAATGTCTATGA
TTATGAAAGAGTATACCTCTTCCAGGAGAGCAGCTTTAGATATTTTAATA
TTCGAATCACCGCTTTCCAGTGAGGTACTCATGGAGATGAGAGGAATTAA
TGCACTACACTCTACGAAAAAGCTATGTCTCGGTGAGTAAATGTGTGGTG
GTGGTTGAGCTTTTCGACCAATTTTGTGATCCTCAAATAAATCACTTTGT
CAATTTTTGACTTTGATCCAGGGGTGAATTAGGCTGTTATGCTTTTAACA
ACCTTGTTTTTTTTCCAACAATCTAAGACATTCTCTCTACAATGAACTTT
TTTTGAATAATCAACTCTCCCAAGTCTTTAGTCTCAAACTTGCACCAAAA
AAGATTTGAGAGCTTGAACTTCTCCTTGTCTTATCCAATTAAACTAACAT
AATCAACATAGACAAAAAAAATATATTCTACCCGACTGCCCTCTGAAATA
ACATAGAAGGATCATATATGCAACTGTTTTCTACCAAATAGTATTGTAAA
ACGAGGAGTTGCATGAGCTTTTTAAGCATATAAAGTTGACATGCTAACGG
AATAAACAGGAGATATACTTATATATATATAAGATTTAGAGGCTTGAATA
CACTTACGGGAAGATCATGTTGAGTATACTTACGGGTACCAACTTATCTA
TAACCTTGAGTTGATAATAAGAAGGCCGCCTTAAACTGCTCATATATTAT
TCAAATAAGGATTTCCACGGGTTTGAAACAACCTGTTGTTTCTTGCTTTC
CTGGGAAACTAGATTACCCCCAAAAATACAGAATATCCTTTGGTGGACCG
CTTAACAGTAAAATTAGCATTTGAATATGCTAATAATTTTAAATGTCTAT
GATTATGAAAGAGTATACCTCTTCCAGGAGAGCACCTTTAGATATTTTAA
TATTCGAATCACCGCTTTCCAGTGAGGTACTCATGGAGATGAGAGGAATT
AATGCACTACACTCTATGAAAAAGCTATGTCTCGGTGAGTAACTGTGTGG
TGGTGGTAGAGCTTTTCGACCAATTTTGTGATCCTCAAATAAATCACTTT
GTCAATTTTTGACTTTGATCCAGGGGTGAATTAGGCTGTTATGCTTTTAA
CAACCTTGTTTTTTCCAACAATCTAAGACATATTCTCTCTAGAATGAACT
TTTTTTGAATAATCAACTCTCCCAAGTCTTTAGTCTCAAACTTTCACCAA
AAAAGATTTGAGAGCTTGAACTTTTCCTTGTCTTATCCAATTAAACTAAC
ATAATCAACATAGACAAAAAAAATATATTCTACCCGACTGCCCTCTGAAG
TAACATAGAAGGATCATATATGCAACTGTTTTGTACCAAATAGTATTGTA
AAACGAGGAGTTTTGTGAGCTTTATAAGCATATAAAGTAGACATGCTAAC
GAAATAAACAGGAGATATACTTATATATATAAGATTTAGAGGCTTGAATA
CACTTATGGGAAGATCATGTTGAGTATACTTACAGGTACCAACTTATCTA
TAACCTTGAGTTGATAATAAGAAGGCCGCCTTAAACTGCTCATATATTAT
TCAAATAAGGATTTCCACGGGTTTGAAACAACCTGTTGTTTCTTGCTTTC
CTGGGAAACTAGATTACCCCCAAAAATACAGAATATCCTTTGGTGGACCG
CTTAACAGTAAAATTAGCATTTGAATATGCTAATAATTTTAAATGTCTAT
GATTATGAAAGAGTATACCTCTTCCAGGAGAGCACCTTTAGATATTTTAA
TATTCGAATCACCGCTTTCCAGTGAGGTACTCATGGAGATGAGAGGAATT
AATGCACTACACTCTATGAAAAAGCTATGTCTCGGTGAGTAACTGTGTGG
TGGTGGTAGAGCTTTTCGACCAATTTTGTGATCCTCAAATAAATCACTTT
GTCAATTTTTGACTTTGATCCAGGGGTGAATTAGGCTGTTATGCTTTTAA
CAACCTTGTTTTTTCCAACAATCTAAGACATATTCTCTCTAGAATGAACT
TTTTTTGAATAATCTCACTACACCATAGATGCACCTACGCAACATCAAAA
ACATGTGTTGCATTGAAAAACGTTGTAGTAGGTCAAAAATTTATGCTTAC
AGCAACATTGTGTTTATAACGTTGCAGTATACATAAATGGGATGTTGTGA
TAGGTTTAAGAAATGTTACACATTTCAACACTTATGAAGTATTGCCATTA
ACATTATTTTTTAGTGATAATAATAATAAAATAAATAATTATATTTTGAA
ATGCATTAATTTTTAAAAAAGTATATTTTAAATTTTCAAAGGTAACAAAT
TGGTTACTAGAGTCATGCCATTTTAAAAAATTATAATATTTTTGATACTT
TGACTTAAACCAAATTTTTAATAAAGTAACTAATTGAATAAAAAATTATT
TAAATGAATCAAATTTGAAAAATATTCTAATTTAATATTTAAAAGTTAAA
AGTTTATTCCTTCAAAAAACAAGTTAAAAGTTTATTATTGGAAAAAAAAC
TCTAGAAATTATGACAAATTTATAAAATTAATATGTTTTATATTAATTTA
ATAGTTAACGATTTTTTAAATACAAAAAGTAATATTATAAAATAATAAAG
AATGAGCCATTTTGTGAAAAATTTGAAGCGGCATGTGAATGTCTAAAGCG
GGGATCTTACCGCCCTGTATTTGAACGAAAATTAACCAAGACCCAGGAAA
CAAATATTAACAAAGTGTACAGAGCAAGAGAGAAAAGCAGTAGCAAAGCC
CTTAAGAAGATAAACTCTATGAGGATTCTGAAGACGTCCCTTCCACCATT
CTTCGCGAGTTCTCGCTGCTGCATATGCTCTCTAGCGATCCCCAAATCGT
CAAGTAAATCTTTTTAACCAATCTATTGTCAAATCTATTTACCAGTGTTT
TAATTCAATTAGGGTTTTAATTGGGTTTTGTTGATTTAATTTTTGGGGGT
TTTGTTGTTGTTTATGATTTTAGAGGCTGATGGATATGAAACAACAAGAG
ACTAATAAGACGGGGAATTCGGTTTTGTACTTGGTGTTTGAGTACATGGA
CACTGATCTGAACAAGTTCATTTGGTCTTTTCGTCAAACAGGAGAGAAAC
ATTCCTCCGCCCACTGTTAAGGTATTTTCAATTTGATTGGTTTTTATGAT
ATGGGTGTTGTTTGAAATGTTTTTGTAATTGGTTTTTTAGGGTTTTGAAT
TTGTTTGTTTTTTGATTGAAATGTTTTCTGATGGTTTTTTTGATTATTGA
CGTAGAGCTTGATGTATCAACTTTGTAAAGGGGTTGCCTTCTGCCACGGT
CATAGTGTATTGGACAAGTGTAACTAATAATTGTTATTGCCATTCCCTTG
ATGTTTTATTCTGTATTGTTTAATTTTTGGGATTATGTGCTTATGATTAT
TGATGTATGTAATTTAGAGACTTGAAGCCTCATAATCTTTTGATGGACCC
TGTAGAAAGGGCTGGCAGTGGCTTGAAACTTATTGGGTTTGCCAGAGCAG
GATCTATTGAGAGTGGTGAAAAGACCAATGACATGCATCTCCTGCCTAAT
GAGCACGGTAACCATCCTTCTCTCTCTTGCAATGCAAATATATTTTCTGC
CTGTGAAGCCTCAAAAGAAGTTACTCAGGTTGTCAAGCAATTACCCACTG
ACGAATGTGGATACCCTAGGCCAGAGTACATTGCTGCAAGCACCGGTATA
TATATTGAACTCCTCAACTTCAAATGTTTAGCACAATGTCATGCAGAGTG
CAACTTTTATTTTGGACTGAAATTGACTTCTAATCTAGCTTCACATGTTA
CTGGCCTTTTACATATGTATTAGTAACTATATATTATAAAATTATGTTAC
TGTCTTATTTTATATACAGGGCTATGCTTATTACATATACCGGACATAAA
TTTTCAGAACATATAATTTTGTATGCTTATACCTCGGATATTCAGTAAAA
GTTAATGTCTGTCTTATTATATATACAGGGCTATGATGACATTCCCAAGG
AGATACAAGCTGGTGCTGATGTTAAGAAGGTAACATCTAATTTTCCCAGT
TTCTTTCTCAGCACAGTCTGAGAACTCTAGCAGATGGATACATTTCTTGT
TGTTTCTTGTCAGATGTGTTATTTATATTTGCTTTTTCTTATCACTGGTA
TCACGTGGCCCAAGCTTTAAATCATCTAGCCTTAATCTTGTAGTCTTACC
TTGATAATTTTCGACCCTGTCTCACATTTTATAATCTATGCTAAGCTTTC
CTTTCTCATAAAAGTAATTGTTCCAAGGCCTGGTTTACTAGAAGCTGTTG
ATATCCAGTCTTGTTGCAAAGGATCCAGCAATGAAGGTTAATTGGAACTT
AGATGGACCAGCTGAAGGTGCTGATGGCCTGCTATAAGAAGGATGATCAC
ATGCTATTAAAGGTCGATGCGAAGTAGGAGTATCATTTTGAAACTAGCTA
AGGGTTGCTTGCTAATGTTGGATGATAGTTAAACTATTCTTCTAGAAGCA
GGTGTAGTTAAGTTAAGGGTGGAGGGTAATGCTGTTGTAAATTGTTTGGC
TTGGTACTGACTAGTTTTTATTTGAATGGTTGTGTAAACAGATTTGTATT
TAACATTATGGGCAATCCAATTTACAAGCATTTTCTGTCATTTTTATTAG
AAAAGTGTTATAGTAGATATAAGAATGGCGTAGTATCTACGCTTAAAAGT
CTTGCAAAAAATAATGGGGGGCACATGTAGGGCCCACCAATGAGGCCCAC
ATGTGGGGCCCATATTTCAGAGAATTTCAGACTTTATTGCAACACTACTG
AATGTTGTTATAGGTGAAACGAAGTGATGCCTTGAGTAAATATTGCAACC
ACAATCATAGTGTTGCAAAACTGTTGCTACATGTCACTACGGCAGCGGTG
CTGAAGGCAACACCAAAAAAGTGTTGTTGTTTCCCTTTTCAGGGTTACAG
CAACATTTTTTTGGCTTTTTGCAACATTTTTTTGACGTTGCGTAAGTGCA
TCTATGGTGTAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCC
CCCCCCCCCAACCCCAAATTGTTTGGTTGAACAGACAATAACATGACAAA
AACAAAGAGAGAGGCATTTAAATTAATCAGACGGCGGAGGCCTCAAATCA
TAGATCTCCCTAAGTCGAGCTCTGATGCCATATTAAAGTTTCTTATACTT
AGATCTAAAAATTTCCTAATAAAGAAGCTCTATAAAATAGGAAATTACAT
ATATGAAGCCGCCTATAATATATTGGAGCAATTGTTTAATATTGTTTGGA
AGTAGCTTTATTTTGATTTTTTTTACTCGAATTGCCAGGGTCCCACCACT
TTACTTACTTTTCCAACTTTTACCTAAATGTAAAAAATTGAGGGGGGCGG
AGGGAGTATATGAATATGTTGTTCATGAGAATACACGTGACCTACACATA
TTATATATAAGATATGGAGGATATAATGCAGCTCGTAAGATTACAAATAT
GAAATGAGGAAATCAGAAATTTCCTGTATGAAGTCAGATTACATTCACGA
TACGTAGAAATCAGAAGTTTATTGTTTGATGTATTAATTGTTCTTTACCT
TTGTAATGCAGCATGGGTTAAGGAACCTTTGAAGAAAAAACAGGTGGCAG
TAGAGAAAAAGACCTTCAAAGCAGAGCAGATTCCGCATGATCATGCTAGT
GGGATCACTACACCATAGATGCACCTACGCAACATCAAAAACATGTGTTG
CATTGAAAAACGTTGTAGTAGGTCAAAAATTTATGCTTACAGCAACATTG
TGTTTATAACGTTGCAGTATACATAAATGGGATGTTGTGATAGGTTTAAG
AAATGTTACACATTTCAACACTTATGAAGTATTGCCATTAACATTATTTT
TTAGTGATAATAATAATAAAATAAATAATTATATTTTGAAATGCATTAAT
TTTTAAAAAAGTATATTTTAAATTTTCAAAGGTAACAAATTGGTTACTAG
AGTCATGCCATTTTAAAAAATTATAATATTTTTGATACTTTGACTTAAAC
CAAATTTTTAATAAAGTAACTAATTGAATAAAAAATTATTTAAATGAATC
AAATTTGAAAAATATTCTAATTTAATATTTAAAAGTTAAAAGTTTATTCC
TTCAAAAAACAAGTTAAAAGTTTATTATTGGAAAAAAAACTCTAGAAATT
ATGACAAATTTATAAAATTAATATGTTTTATATTAATTTAATAGTTAACG
ATTTTTTAAATACAAAAAGTAATATTATAAAATAATAAAGAATGAGCCAT
TTTGTGAAAAATTTGAAGCGGCATGTGAATGTCTAAAGCGGGGATCTTAC
CGCCCTGTATTTGAACGAAAATTAACCAAGACCCAGGAAACAAATATTAA
CAAAGTGTACAGAGCAAGAGAGAAAAGCAGTAGCAAAGCCCTTAAGAAGA
TAAACTCTATGAGGATTCTGAAGACGTCCCTTCCACCATTCTTCGCGAGT
TCTCGCTGCTGCATATGCTCTCTAGCGATCCCCAAATCGTCAAGTAAATC
TTTTTAACCAATCTATTGTCAAATCTATTTACCAGTGTTTTAATTCAATT
AGGGTTTTAATTGGGTTTTGTTGATTTAATTTTTGGGGGTTTTGTTGTTG
TTTATGATTTTAGAGGCTGATGGATATGAAACAACAAGAGACTAATAAGA
CGGGGAATTCGGTTTTGTACTTGGTGTTTGAGTACATGGACACTGATCTG
AACAAGTTCATTTGGTCTTTTCGTCAAACAGGAGAGAAACATTCCTCCGC
CCACTGTTAAGGTATTTTCAATTTGATTGGTTTTTATGATATGGGTGTTG
TTTGAAATGTTTTTGTAATTGGTTTTTTAGGGTTTTGAATTTGTTTGTTT
TTTGATTGAAATGTTTTCTGATGGTTTTTTTGATTATTGACGTAGAGCTT
GATGTATCAACTTTGTAAAGGGGTTGCCTTCTGCCACGGTCATAGTGTAT
TGGACAAGTGTAACTAATAATTGTTATTGCCATTCCCTTGATGTTTTATT
CTGTATTGTTTAATTTTTGGGATTATGTGCTTATGATTATTGATGTATGT
AATTTAGAGACTTGAAGCCTCATAATCTTTTGATGGACCCTGTAGAAAGG
GCTGGCAGTGGCTTGAAACTTATTGGGTTTGCCAGAGCAGGATCTATTGA
GAGTGGTGAAAAGACCAATGACATGCATCTCCTGCCTAATGAGCACGGTA
ACCATCCTTCTCTCTCTTGCAATGCAAATATATTTTCTGCCTGTGAAGCC
TCAAAAGAAGTTACTCAGGTTGTCAAGCAATTACCCACTGACGAATGTGG
ATACCCTAGGCCAGAGTACATTGCTGCAAGCACCGGTATATATATTGAAC
TCCTCAACTTCAAATGTTTAGCACAATGTCATGCAGAGTGCAACTTTTAT
TTTGGACTGAAATTGACTTCTAATCTAGCTTCACATGTTACTGGCCTTTT
ACATATGTATTAGTAACTATATATTATAAAATTATGTTACTGTCTTATTT
TATATACAGGGCTATGCTTATTACATATACCGGACATAAATTTTCAGAAC
ATATAATTTTGTATGCTTATACCTCGGATATTCAGTAAAAGTTAATGTCT
GTCTTATTATATATACAGGGCTATGATGACATTCCCAAGGAGATACAAGC
TGGTGCTGATGTTAAGAAGGTAACATCTAATTTTCCCAGTTTCTTTCTCA
GCACAGTCTGAGAACTCTAGCAGATGGATACATTTCTTGTTGTTTCTTGT
CAGATGTGTTATTTATATTTGCTTTTTCTTATCACTGGTATCACGTGGCC
CAAGCTTTAAATCATCTAGCCTTAATCTTGTAGTCTTACCTTGATAATTT
TCGACCCTGTCTCACATTTTATAATCTATGCTAAGCTTTCCTTTCTCATA
AAAGTAATTGTTCCAAGGCCTGGTTTACTAGAAGCTGTTGATATCCAGTC
TTGTTGCAAAGGATCCAGCAATGAAGGTTAATTGGAACTTAGATGGACCA
GCTGAAGGTGCTGATGGCCTGCTATAAGAAGGATGATCACATGCTATTAA
AGGTCGATGCGAAGTAGGAGTATCATTTTGAAACTAGCTAAGGGTTGCTT
GCTAATGTTGGATGATAGTTAAACTATTCTTCTAGAAGCAGGTGTAGTTA
AGTTAAGGGTGGAGGGTAATGCTGTTGTAAATTGTTTGGCTTGGTACTGA
CTAGTTTTTATTTGAATGGTTGTGTAAACAGATTTGTATTTAACATTATG
GGCAATCCAATTTACAAGCATTTTCTGTCATTTTTATTAGAAAAGTGTTA
TAGTAGATATAAGAATGGCGTAGTATCTACGCTTAAAAGTCTTGCAAAAA
ATAATGGGGGGCACATGTAGGGCCCACCAATGAGGCCCACATGTGGGGCC
CATATTTCAGAGAATTTCAGACTTTATTGCAACACTACTGAATGTTGTTA
TAGGTGAAACGAAGTGATGCCTTGAGTAAATATTGCAACCACAATCATAG
TGTTGCAAAACTGTTGCTACATGTCACTACGGCAGCGGTGCTGAAGGCAA
CACCAAAAAAGTGTTGTTGTTTCCCTTTTCAGGGTTACAGCAACATTTTT
TTGGCTTTTTGCAACATTTTTTTGACGTTGCGTAAGTGCATCTATGGTGT
AGTGGAGTAAGGGACTAGGGGATTGCATCCAGGATAAAATTGTTGCAGGT
AAAGCTAACTTGTCACATGATGACACATTTAGAAGGCTAGAACTTCAATT
CCTGTGTGAACTAAGTAATTTTTTTTATTATGTGCAGCTGGGGATGAGGA
AATTATCAGGTTAAGAGCTGAGTTGGAAAAGCTGAAGGCTGACTTGGCAA
TGAAGGATGAGCTTCTAAAAACCTATAAGTCGGTATATTCTGCACCCTGA
TCGACATTGCTCAGTAAGTAACGAATTTACATGTATGAAGTTTCTGAAAA
TGTAACTAATTTGGTCTTTTGTGGGTTCTTTTCGAAATTGTACTGTAGAT
TCCATTTGTGCGGACAGCTCAAGTCAAAGTTCGATGTCTTGACAAGCTTA
CAGCATTCCTGCGTTTTACCGTTTTATAATAGAAAATGCTAAAGAGATAA
ACTTTTTATGGTTAACGCTTTCTTTTACATGTTTTTATCATCTCCATGAA
AAACACCCTTCAATGTCGAAAGGTATATATTGAAACCAAGTAATTGGCAA
TTTAATATAAGTTTTACTATGTTAGTGTGTAAGGATGTTTTGTATGAACT
TGTTATTTTGTTTCAAACAAGTTTAACCAAATTTTATTAACAGATCTTGT
TAGCTTGCATTGGGGATGATGGAGCAGAAAAAACTCCAGAAACAGCATTT
TTCAACAAGATTACAAGACAGTGTCTGGCCTTTGGATGTGTAACTTATGA
AGTTGTACTTTGCTTTTAATTTTGAAGATTTAAGTCTGTACTGTCAAATG
ACTCAAATGGTTTGTGTCTTCGTCTTTTCACTTCTCTGCTTTGTAGTCTG
AAGTCAGAATTAACTGTGGTTGTGAATGTAGTGAATCCTGGATTTGGACA
TTTGTGGACTAAGGAATTACTGAATGGTA
Sequence Length: 
19029
Sequence Checksum: 
d257b1e9609d0b542ed83bbbc21554ea
View location in JBrowse: 
DCARv2_Chr6:4313565..4332593-
Gene: 
LOC108227836
Gene Biotype: 
protein_coding
Gbkey: 
Gene