LOC108196083

Resource Type: 
Gene
Name: 
LOC108196083
Identifier: 
LOC108196083
Cross Reference: 
NCBI GeneLoading content
Relationship: 
There are 2 relationships.
Relationships
The mRNA, XM_017363182.1, is a part of gene, LOC108196083.
The genetic_marker, MK006389 K3833, is located in gene, LOC108196083.
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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.

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Transcripts: 
Transcript NameIdentifierTypeLocation
XM_017363182.1XM_017363182.1mRNADCARv2_Chr7:19646346..19659179
Sequence: 
AATAGAATAAAAAAACAGAGGATGAGAAGATTTATCCCTGTTTGAATCCC
GTTTCTATTCCCCCGGCATATTCCCATATTCCCCTCCCTCCATTTCTATT
CCGCTCTCTTATTTCTATTCCATTCCAACTCCAATTTCAATTCCGATCGG
TCAATGGCGTCATCACTTCACAACACTCACCTCCTCTTGATTCCCAAACC
CAAAGCCCCTTCAATCTTCACCAAAAATACACACACATCTACTTACACCT
ATACTTACAACTTCCAATTTTTTAAACCTTACGTCAATCTTCTTTCTTCT
TCTTCTAACTCTTCTCACATCTCACGCGTCTCCACCGCGCCTGTAGAGCA
CGCGCCGTCGCCTTCCGACTTCGATTTTTCCAAGGAAATCGCTCGATTAA
AAGCCCTACGCTCCACCCTATCCAATTCAACTAACTTAGAGCAGAAAGTC
AAAGTAATTGACCGTGATTCCAGAGTTAAGAGCTTCTTCCGCACACACAG
TGACGATGTTTTTGGTCTTTTGGAGGAACATGAGTTGTTTTTGATCAAGT
GTGTGGTGGCGGTGGGGCAGGAGCACCTGCTTAAGTCGGATGAGTTGGAG
TTTGAATTCGAGTCAAAGCGGAGTTCGTTGAAGAGTGCGTTGTATGGATT
GGCGGAGATGATCGAGAATTGGGATACAAATGAGGGAGTTGTGAAGAATG
TGAGTAGTGGTGAGAGGATTGATGATGATCAAGTGAAGGCTTTGCAATCG
TTGGTTAGAAATCTGGGAGAGGTTGAGCAGTTTTATGACTGCATTGGCGG
AATTATTGGGTTGGTTCAATGTTCCTTTTAATTTATTTAGGCGCTTTTTG
AAATAAAACGAATTAGGAAATAATATTTCAAGACTGATCTATGACGCATA
ATACACTGCTTTAAGTGGTTCGTAGTCGTATGATGTGATTTCCGTTTGTA
TTGTAGAGACCACCAATTTGTGCAAATGTGATTGGATATATATTTGTACG
CTTAAATAGTTACGAGTGGACCATGAGCCCCCCGCCCCATATACGTGTGT
CTTTGTGAGAAAAAATAAAGTAAAGTTAGGACAGTTAGGATTGAGTTAAT
TCTGAAATAGTTATATGATTTTGTAATGTAAATTTCGTTGTGGTAGCAGT
TCCGGTCTGCTGTCTGAATTTACATGTTAAAGGAGAAAGGGCGCTTTTGA
ATCATATGTTTACAATTATTATATTTTTGGGATGTGTGCTTAGGTTGCAA
TTGTCTACTGTATCTGGAATTTGGAAAACAAGGCAATAAAAAAAATTATG
CCTCTATTATGGCACGGGATTCCTTTTTCTTCATATTGCCCCCATCGTTC
CTTTAAATATGATTGTTTTAGGTTCAACAGATGTTTACTGTTGCAAACGG
CTTATAGTTTGATTTTAGGAACATTTAATTGATGCATTGTGTCACTTGTA
AGAGCACAAAGTCTAAATTCGCGACTTCTTGTCTAGATTCCATTTATGAT
TGACGGTGTTCCCAGTCAAACTAATGTTTTCTTTATGTTTTGTCTTAGTA
TCCAAAGTTTGGACTTAAACCTATATGAAGTTAATAATTAATTCACCTTG
CTCAAAACCTTTTTTTATTAGATATCAGATCATGGTGCTGGAGCTTCTTG
CTCAATCAACTTACACAGAGCAGGGCATCAGTCTTTCCCATAGAAAAAGT
AAATCAACAGAATCACAAATTCTTGAGATTAACCCTCCTAATGTGCTTGA
CCTTTCAAAAGATACAGAATATGCATTTCAAGCAGCTCTATGGGGAATCG
AGGTTTGAACAGTACCTCTGTCTTTCTTCAAACGGAAATTTTTTGGCATT
ATACTACAAAGATATAAACAATATTGATTGGTTTCAGGGCCTGCCAGACT
TGGGAGAAATTTATCCTTTGGGTGGTTCCGCAGACAGGCTTGGTTTGGTT
GACCCCGTTACAGGTGAATGTCTTCCGGCTGCAATGCTTCCATATTGCGG
ACGGACATTGTTGGAAGGTCTTATAAGGGATCTTCAGGTATAATATCTGC
TATTTGTCAATCTTTCAAGTTGGTATATTCCTTGTTGTGAATGTTGTTAA
TGTACTAGATTTGAAATGCAAGTTATACATTGTTGTAATTTTTTTGCAAG
GCTAGAGAGTTCTTGTATTTTAAATTGTATGCCAAACAATGTGTGAGCCC
TGTTGCAATTATGACAAGCTCAGCAAAGAATAACCATAAACACATCACAT
CATTGTGTGAAAAGCTGAGATGGTTTGGACGAGGCCGGTCCAGATTTAAA
CTTTTTGAACAGGTTTGGGATTGAATACTTCAGTAGCAGTACTTTTTCCC
TGGTTATACTATTCTGTTGGAATATATATGTATGTATTTATAAGTTTAAT
ACACACTTTTATAATTGATATGTTATCAAATGGCAGCCTCTTGTTCCAGC
TGTTGGTGCCGAAGATGGTAAGTGGTTGGTGGCCGGTAAATACTTTCCTG
TATGTAAGCCTGGTGGTCATGGTGCGATATGGAAACTTGCCCATGACAAA
GGCGTTTTCCAGCATTTTCGTGACCATGGAAGAAAAGGTGCAACAGTTCG
ACAAGTCAGGTTGCAGTCAAATATTTCATTGACCTTTTGACTTTTCTATT
AAGCCACGTAGTATATTGTTTTCTTTCTTAAAAAAGTTTCAAGATATATT
GTCATTGATGAATTTGCAGTAATGTCGTGGCTGCTACCGACCTGACTCTC
TTGGCACTAGCTGGGATTGGATTGCGTCATAATAAAGTAGGTCCTGCAGT
ACAGTATTTTTGCTATATATACAATAGTTCTCATTAAATTTTAATCTGGA
TTTGACGATCTATGTGATTGTAAATAGCTAGTTAAACATCAGGGAGGATA
TATGTACATATTAACAGATCAAGAGTCCAGAAAGTAGAACACTGGAACCT
GAACGTAATATAACATGAATAGAGGAAGCACTTCCTTCAAAAGATTGCTT
CTGATAAAGCCACCTCAGGATTCTTATACCTGTTTAGAACTATTAAACAG
TTTTTGGTATACTGGCTATTGCCTTGAAGGAAAACCAAAAATATACCTGA
ACTTTTACTGAAAAAATATTCAAGTGACTCTTTTCCTTAAGATCTAATAT
GCTCTGATATAACATAAATTTATTTTAGCCAAGTTCCATGTAGAAAAGTA
AGATTTAAATTGAGCTTCCCCTGTATGAATGCACCTGTTGTTTGCATTTT
CTGTATAATCAAATCCAAATACACGATCAGTATTACAGGATACTATCCGA
TTGATGGTTAGTTCCACATCTACTTAAGGGCTTCGAGGGGAATGTCAGAA
CCTTGATAAAATTAGAATTTATATAAATAGCTTTAGTTATGGAACTGTTT
TTTTCCTCCTCTGAAGTTTGGAGTTTTGCTTGGGTTATATTATAACGAAT
TGAATAATATTGACGATTGGAAGCATAAAGTTTGAAAGCGTACAAATAAA
CATGTTTCATATGCTCTATTTCCCAAATGCTGATCTTACAGAAATTGGGA
TTCGCGTCGTGTGAGCGGAATCCAGGGGCTACCGAAGGCATTAATGTTCT
AGTCGAGAAGAAGAATCATGATGGAAAGTGGGAATATGGCATTTCATGCA
TTGAGTATACAGAGTTTGACAAGTTTGGAATTAGTAATGGACCTATTTCT
AAACATAGGTATTATAAATTTCCTTATTCCTTTGATAAAAAGAGTGATAA
AGATGTATTTATATAATTTGATTGATTTATGATTTTCTATACTCCTAACT
TTCACGATTGGAATGTCTCCTACCTTTTAGTCAGATTGATACCCTTTCAC
GAAATATGCCAAAAATCTGCTAAAGATTCTTAAAATTTGATAAACAATAA
TTCATATAGTCAGGATCAAATAAAAACTTCATTCTGAATTAGAATTTAAA
CCCAATATCAGTCTTGGATGCTAGTTGATGATGTTTATTTAATCAACAGC
TAATATCTATCTTTTCAGCTGCAGTACACACTGTGTTGGGTTTCTGCTGC
AGGACACTATGTTCTTTTTGTCAAATATAAAATATGGTGCACTCCTGCAC
TATACAATATTTTTTTTTTATAAATCACATAATAATTTTTAAAGAAAAAT
TGTTTTACACAGAACTTTTTCTTTTTCTCATTATAAAGAAATTATGTGAA
ACATATATATATTTCTGCTTAAGCATATCGTAATTGATTTTAAGGTTTCA
ACACTTACGTGGTTCTAAGTAGAACCCGACTTTATATATATTATATCTAA
CTTTATCAACTTAACATTGTAATATATTGGTAAGTGAACTTTTAAGGTTA
ACGCAAATGATGTGTTAAATAAGAATTTAATGCACACGATCTGTTGTTTG
CTTTTTATAGATTTTAGTGCAAAAATATGAAAGCTCAGTTTGATAATACC
ATAGATAATACATGTCTGGTTCAATAGGTAATAACAAAAGATTGTAAAAT
TTATTTATAGGGAGATGGTCTCTGACAATGGATTGTTTGGCAACAATCTT
TCCGCCCTTTTTTATGGCTGAATGATAAAAACCCTAGATGGGTGTCTAAA
GCACTGATAAGTGACGTATCCCCCTACATTCACATAAATAATTATGTGTT
ACGTCTTTTCAGCTATAAAAAACCGCGGAAAGATTGTTATAACAATCAAT
TTGTCCGGGACCGGACCCTTATTATTATGTATTGGTGTTTCTTTCAAAAC
AACCAAAATTACGCGCAAGGCGTAAACCACTTGGAATAAATTTATTAACT
TTAAAGTATATTTTGTGCTCAGATTCTTGCATGCATCTTATTTGCATATT
TGATGAATTTTGTATATGTCTAAAGTGAGTTGTAGTGTTGGTTAGACTTG
ACCTTATATACAATTCTAATGTATATTTTCTTTATTAGACTCATAATAAT
CATTTGTGTTGATTGTATGTCAATTCTATTTGCCAATATTTGGAGTATGG
TTAAGAAAATAAATCTGATGTATAGTGTAAAGAAATATTCTGGCACGGGT
GAGGGTGCGGAGGAAAAGATCTTATCCAGATTTTAGTCAGAGTCGGCTCG
TTTTTAACATCTTCCAAACCTAAATTCACTGCCCAAAAAAGTAAATTACC
CATCATGAGGCCATCTGGAGTCATCAACAAAACCTTTAGTTCACATATGA
TACCATTGCAACACTATTAGGTTCTTACATACGGCTAATTATAGTTTCAA
ACGGTGATGCAATATGCATTATACTGAATCGAAGTAAAAATTTCTCAGTT
TGCAGTTAATTAAAAGAAGCATTTAGTATATAGTATCATAAAATACCAAT
CACATGTGAGTTTCTGTAACCATTTATGTTTGATGACTGTCTTTTCGTCT
GTATTTATTTTAGAGTGCAATATATGTGTTTTTTCCATGACCGACCTCTT
GCGTTGTGATAAGTTTGCAGGCAGAGTTTCCTGCCAATACAAACATTCTG
TACGTGGACTTGCATTCTGCAGAGCTTATCGGATCAAGTAATACCGAAAC
CAGTTTGCCAGGCATGCTGCTTAATGTAAAGAAGCCAATCACGTACATGG
ACCAGTGTGGTATCCATCATCGGTAAATAGCATAAATTTTGAATTTCTTT
AAGTATTTGATATTCTGGTGGATGGCCACTGCAAAGATACCTGCTACTAC
AAATTCTAGAGAGAATGAAGGAGATTCTTGACAAGTGCAGTAACTAATTT
TTCCTTGTATATCTATATTTATAAATGGAGGATGCACCCCTTTTAAGTCG
GCGTGTTGAGTAACTTGGAGTTGATAAATTAAACCCCTGATTGGTAATTC
ACATGAGAGTATTAACTAGATTTTGCATTGCGCTTCTTAATATAAAGTTA
CAAATTAGCAAAAGACGGGAAGAAACCAACAACTTTTGCATCTTTCTTTA
TGTCATCATAAACACCTTTTAAATTACAGACCAGCAAAAGAAGGGAAAAG
ACCAACACCCTCTCCGTCTTATTTTGCCATTATCAAGAGAATATTGCTAT
TTTTCAAGTTAAATAAAAACTCCTAAGCTTAATTATTAAAATCAATACAA
GTCAAATATGATTGGAATTGATTTACTCTTGATAATCAAGTGCAGAATAT
TATTAATTACTAAAGATCTTTGTGAGAAGCCGGGGAATCTTCATTATTTT
TCTGCTTCCTGATACTGCAGCCTTCACATGATTTCTTAACCTTTACGGTC
ATAGTCCTAGTGGTAGATCTATCAATTACTTCAGATTTGTACAATGTTTA
CTCACAAGAAAACTGCAGACCACTTTGCTTTGGAATAAATAATAAGTAAC
CCTGAGGATCTGTGTTGATTTAGGTATTCATAAAGCATTTTTGCTTATGA
AGCTAAGAATCTCTGTTTGATCATTTTTTTGGATAGTGTCTTGGTTCTGA
TTGTTATTTCTTGTGAGTAGTGTTTACGGTGGACGTCTGGAATGCACGAT
GCAAAATATTGCGGATAATTTTGTGAACATGTATCCCTCTCGGTGTTACA
AAGGTGTAGAAGGTGATACAGCTATTTTTTATTATTAATTTATGCAATTC
AATATAGTTTATAGCCACAACTTGCATTATGTTAAATATGTATTTACCCC
CATACACTATAGACTTGTTTGCTTTGTAATTGCAGATTTGTTGGATACCT
TTATTGTGTACAATGACCGAAGGAAAGTTACATCATCTGCTAAGAGAAAA
AGAAAACATGCCGACAAGTCCTTACATCAGGTCCATTTGAGTTTATTTAA
AATTATATAAATTATATATCCTACCCCTAAGATTGGATGCTTAGTGTCAT
CTGCAGAATATGTGCATTCCAAATTCATCTTCTCTTAGTAGTTATCAATT
TAACTAATTTATCTTATATGTCCATGTGTTTTCGAAGCCATGAAGTTACA
TATATGTGCTTGCTAACGTGATGTGACCCAGAACCTGACTCGTTTTTATA
GAGACAACACGCAAATGATACCTCAATTAGCCCGAAGAAATCTGAAAGGA
TTTGTTGATGTTCATCTGATCAGTTTTTGTGAATTTATGAAATTGATACA
TTTACTAAACGAACATAACCCTAAAATGCACCGACACCCTTTATCTCCAC
CAAGTATTGTAATATTATATGCCTAGTATAGAATGTATGTCAGTGTTATA
CTGTATTTTTTTGTTTGATCAAATCCATAAATGAACCCAATGATTGCTTA
TTAATGTATATAATACATGTGCAGACTCCAGATGGGTCGTTGTTAGACAT
CATACGCAATTCCTATGATCTTCTTTCCCGGTGTGATATGAAAATTCCAG
AGGTATAGATTTAAGAACCTTTGCGATTTTTCTCTGAACATGCTATATCT
GTCTTCTTTTAGTCAGCTACTTTATATTATAATGAGCCTAATGATTAGTT
GTGATTATGAGAAATATTAAGTATTACCATAGTACTTATCATAAACATTC
TTGTGATATTTCATTAAAAGCGTTGTCTTCCGTTTATGATATAGATTGGA
GACAATGACAAATATGCTGATTCTGGACCTCCTTATCTTATATTTCTTCA
TCCTGCTCTTGGTCCACTCTGGGAAGTCACCAGACAGAAGGTAAAACATT
ATCACACTTGTCATCACATCTAATGATTTTACTGATTTCTAGTTTCACCG
TCCTCATTAAACTTTGTTCCAAACATGAAATTCAATCTATTTCTATTTGA
TCAGTCGTTACCTATAGTCCTAATCAAAAGACTTCCCATTTCAAGAAAAA
GAAACTGTAGGAGTTTGTCTATTGTTGAGAACCGGAAGCCTTCAAGCAAT
AATTATCGGTTAACATCCTGTTTTTACCGTGTCCATGACTACAAAACATT
TTAATAACTTTTGAAGCAATTGATTGTTACCTTTCTTTTGCTAGATAGAA
TTGCTACCTCCCTTCACATTTGATTGCTGCTTATATATTATTCATAGACA
TAGAAGAGATGCTAATCAGAATCCTCTTCTAAAGTTTGGAACATATATAG
TAATTTATTAAATTATCCCTCGATAACTAAAAAAGCAAACTGTAACTTCT
TTGTCTTTAATACTTATCAGTTCAGCGGTGGTTCTATTACTAAAGGTTCA
GAGTTGCAAATCGAGGTGGCTGAATTTTTTTGGAAGGATGTCCAGGTTAA
AGTCCATACATATATATTTGACGTCTTACTCTATTTATAGCTCTTTGCTG
ATCTTCTCCTGCCTACTTTCACTGGATCATCTTTCCAGCTTGATGGTAGT
CTACTTGTTATAGCTGAAAATGTCATGGGCTCAACTAAGACTGATCAAGA
TGGTGAGCCTCTACTACAGTATGGGCATAGGTACCAAGTTACCATTCAAC
TAAAATGAATTATAAGTTTTGAAAAGAGTTAGGAACAAATGGCTAATAGT
TAATATAAATTCAAAACCGGACTTCATTCTTGCAGGTGTGGAAGATGTAA
GTTAGAGAATGTTAAAGTAGTAAATGATGGAATTGACTGGAATTCAAGTG
ATAACATCTACTGGAAGCATGAAGTCCAGCGGTTCGAGGCCCTCAAGGTC
ATTTTGCATGGAAATGCCGAATTTGAAGCTGTGGATGTAATTCTGCAGGT
TAGATTCAGATTGGGCTATTTTATTATCAAATGTGGTATAAGTTAAATTT
TCAGTTTCATGAAGTTTGACCTTTTGATGAGGCGCATACTAACTTTTTGC
ACATCTTAGCGTAAGACCTTAACAAACAGTTTTATGCCACACTGTATCTG
GTCGAGAAAATAATCTTAGTATCTTACCAACTTCAGGTATTTAGATCTAC
ACAATAATGTGTACAATATTCTATGAGTACTCTATGTAAATTACATACTA
ATATGAGGTCTTCGTATAAAGATGTATAGCATATTCTTCTTAATGGTAAA
GATGTTTACATTCCAAAAATCAAAACTATTACCAAGTTTGCTTAGGATGC
AAAACTAACACGGTCCTCTGATTTCAAATACAGAAATATTAAATGCTAAT
TTTCTGGTCCTAATTTATGCAGGGCAATCATACATTTGACGTCCCAAGCG
GCTATAGAATGAAGGTTTCATCTGCAAATTCAGGTTATTGAATAACTATA
TCAGTATACCCATAAAGTACTGTTTTCTTGCACATGTAGCATTATGTTGA
TATAATTTGTGTTAGCTTGGTATGAAGTAAATATTTTCTGTTCCTTTCAC
TTAAATTATTCTATAATGGCTAATTTTTATAAATAAAAGTGTCAGGTTTC
TATATATATAAATAATATTGATATCAGAATAGAATGGGCATTGGTTAAAT
ATTGTCCTTTGGTGTGACTTCAGTATAATATCATTTGTTTGATCATGTTT
TAAGACCAGCAATCCTCTATTTATTCTCTGGCTATTGTCAAAACCAAATC
AAACTGATTGTCTTTCCTCTAGATATGTTTTCCAAAAGTTGGCGGTGTTG
AATACGTGATTGCTACTAACAATTGTCATGTTGTATTTGGCTGTGATTTT
GTTTGTATAGAATTACCTTTCAAAACAAAACATAATCAGAATAAAATGGG
CATCGATTGAATATTCTTCTTGTTGTGACTTGTCAGTCATAAATACTCCA
GTATATCTATCATTTGTTAAACCTTACTAAACAAAAAAAATCAACGTAAC
CCTACCTCTACTTTAAGGAGTAGAGGGGATGTCTTGGAGACCTCTGATTT
TACAATTAACAGTAAAAGCAACAACTAAAAAATATTGTGGACTGTAATAT
GTATGTGCATTTAATGCATGGGACTACCCTAGAGAGTATAAAGTAGACTG
AAAATTGTGTGCGCATTTGGTGCCTGCCACCTGGTTTATAGTATGATATT
GTCCACTTTGGGCCTAGCCCTCGTGGATTTATTTTTGGGCATCTCCTAAA
AGGTCTCATACTATTAGAGTTATTCTTGCTACTTATATTCTAGTTATTTG
CCATCTCACAACCGTTGTGGGATAACTCTTAACAATCTCCCCTTCATACA
TCGAGCTCGACACTTGTCGAATACTGCCTCCTAGTGTGTGATTAGGCTCC
TCCTAAGCCCATACTGGCTATCTGGCTTCCCAGGCCCAAACTTGAAGGCC
CACTTGCCTCATCATTAAGCCCTATCCTGGGTTGGCCCATCTTCCCCTCC
CAGGGTCCATTGTGGAGCCCATTGGAGATTGTTATGGACTGTCATAACAT
GGCTCTGATACCACTTATTGGGCCTGCTAAGCAAACCTAACTCCACAATA
GTATGATAGCCTGCATGGGTTTGTTTTAGGCATCTCCCAAAAGGCCTCAT
ATTATTGGAGTTGTTTAGGTTGTCTTATATTCAAGTTTTCTGCCTCTCTT
AGAACTGATGTTGATATGTGACAACTCCTAACAAGGCAACACAGTACGCC
AATTAACTAACCCTCACGTAAGTATCATATGATGATACTTAAAATAAATT
CTGCTAGTCCCCACCTAGCCAATCTTAATCTTACCAAAGAAACTAGACCC
TCTAAACCCCCACCCTGAATCGGGGAGATCATACAACATTTAAGATATCT
GCTAGCCCATCGGGATGTCTCTAGCAATTCCTATCAGAGGCCATGTTCTT
CGTATGAGATCTAGGGCCACCATGTCGAGCTTCAACTACTCATTTCACAA
CCTTCATTCTGCCTCTCCTCCTCACCCGCTCAACTGATACTCACGCTCCA
CTTTTCACACTGTTGTTGTTTTGTAAACATGGTTGCAAGTTGCACCACCT
CGATCTCCTTTTTAGTATATATCTTACAAACTTGACCGTCAACTTTGTTC
GCAATTTCTCTTCTTTTTTTTTGGGGGCAGATATATGTTAATTTCAAGTA
ATCTTACGGCAAGTTCTATGGTTGGATTATGTTGGGAGAGCATAACAAAT
TATGCATTTGTATCATTAAATGTCATACAAAAACTACCCCGTGTGTGTGT
GTGATATAGTGGAGGAATTTGGTAAAAACTTGCAAAGTTTTAAGTTGAAC
ACATATATAATTCAAGTTCAACATTTTATGGTATAATTTGGGGTGAGCAA
AACCAAACCGGGACCGAAAAACCGAACCAAACCATGTAAATTCGGTTCGG
TCCTAATTTTCTGAAAATTTGGTTTCCGGTCCGTAAAAAATTATTTTGGT
CCGGACCGAATAGACCAAACAATATATAATATTAATTTATATTTATATAT
TATATATTTTGTATATATCTTAAACTTTATAATTATAATATCTAACTTGT
AAATTTGATTATATCTATCTTTGGTTAAGTGGTGGTGATTAATTAATATT
AAAATTTTATAAATAAATCATGAATATTAGCTTTACTTATAATATAAAAT
TTTTAAAATAGTTTTTTTGGGCCAGACCGAACCAAAATAATTCGGTCTGG
TTCGGTCCATAATAGAATTTCGGTCCGGAAAAAAAAAATCAAATTATAGT
ATATTTATATTTTGTGTTAAATCAAGTATATGACCATTTCTACAATGATA
TAATTAAGTAATAAATTAAATAATCAATACGTGATATTTCTATACCCTAG
CTGGGTATTGGTGGTGAACCGGGAATAGTAGTTCAAAAATAATTAAAACG
TGTTCAATGCAATAGTAACTACGAGCTCTAGTTATAATTATATGCTAAAT
TTTATTTAGCGATTTTATAACAAAATGGTAATGTTTTTTCAATTATTTTT
TACACGGATACTTAATATAACTTAAAACAGGAAATTTTTTGCAAGTTTGT
ACTTATTCACTTAAAAAAGTTTTTATTTGAATTAGCTCCTATATATGTGT
TTGTCGCATAGTGTGTCAAATTAAATGTGCAGTAAATCTGTTAGTCATAC
ATGTTCCCCGTGGACATATAATGTATTTTTGTTTTTTTTTACGTCCGTGT
ATTCATGTTTTAATATTGGGAAGATATTACCATTAATCATATGTTTAAAA
CCTATGCATGTATATTTTGTTCTTGTTAAAATAATGTTACATTATGCTGC
TTGGTATTCTGATTCAATTTGTTTAACCACATTAGTATAGTATGCTTTGC
TTGACCAATGTATCATTCTATGTTTATAATTGTGGTTAATACTAATTAGA
CAAATTATTTTTTGTTTTCCTCTGCTTTTGTGTATGTTGTTGTGATGGTC
CATTTTCCTGATGTTCTATTTGACTTTAAGACAAATGATTATCTATCAGT
TAAATTTTAAACCATCAGATCATCTACCTCTCCCTCTATGTAGAGTAATC
ATTGCTTAGCGGTTGGCATGTAAATGTGCATAGATGCATCCAGTGAAAAC
ATGAAAGGGGCTACATATAAATTGTATTTTTGTCCAGTTAAATTTGCTTT
TTCACTTGCAATGTTATAAATTTCTGATTCAGGCTTAGCGGTCTGTTTAA
AACCTATCAAAAAAGACTTGATGGATTGTGGAAGCTGGTTCTGGAAGTAC
CACATAAAAGGAAGTCACGTACAATTGGAAATGGTGGAGCACTAGAAGAC
TAATCACATACTCGACTTTAACTTGTGAACCAAAGTTCACAACTGGAATC
AGAGTTCACTTGTCAGCTCATCCGATTTTCTTGGTTAAACTGAAGTTAAA
CCATTTTGATAATTATTTACTCATTGCTGTAGTAAAACATTGTTAAATAT
AGTGTTTGAGTTAGAGCCTTTCTTATTGTAGCCAGTGCAGGTTGCTGCCA
TTGTAACTTCCCTGTAAATTATCTGTAAATCAGTTGTCAACATATATAAA
AGTGTAAATTAAGCTTAAATCTATCTTTTGTTC
Sequence Length: 
12833
Sequence Checksum: 
d8610e4253af3c0474820dbc82faa0ff
View location in JBrowse: 
Gene: 
LOC108196083
Gene Biotype: 
protein_coding
Gbkey: 
Gene