Resource Type:
Gene
Organism:
Name:
LOC108199523
Identifier:
LOC108199523
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017367364.1, is a part of gene, LOC108199523. |
| The genetic_marker, MK009805 8_3881241, is located in gene, LOC108199523. |
| The mRNA, XM_017367365.1, is a part of gene, LOC108199523. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017367365.1 | XM_017367365.1 | mRNA | DCARv2_Chr8:3879266..3904964 |
| XM_017367364.1 | XM_017367364.1 | mRNA | DCARv2_Chr8:3879266..3904964 |
Sequence:
GCAAAACCACAAGGTATAGAGCAGTACTGGTATATACTTTCACACACCAC
ATTGACGGTTATTTTCTTCACAAAAAACAACGACTCATTCCGTACCCGAC
CCGACCCGACCCGTTGGACATGTTACCGGAAACCTCATCTTCTTCACCGG
AGATGGTGAAAAAGAAGATGATAAAGCACCGCTTCAGGTCCTTAAAGCTT
GTAAACATAAACATGGATGACCCTTTAGCTGAAAAGCCCTATGGAGTTGA
TGAGTATGGTGAACTTGATAATGGCCTCACTTACTATGTTAGATCCAATT
CTAAGCCCAGAATGCGTGCTGCTCTTGCTCTTGCTGTGAAAGCTGGGTAC
TTTCTGTTCTTACTTGTTTATATTTGTGTTTTTTGTCTTTTGGGTATGTG
TGATTCTCGCTTGGTTGTTGATTTTGTGGTGGGGTTTTGGTTTTCTTGGT
AAATTTTGGTGCTTTTTGTGTTTTGGTTACTGTTGTGTTTTTCGATGCGT
AATGTGTGATTTTTGTGCAGTAGTTGGTTTTTAGTGTTGGTGTTGAATTT
TGAGGCGGGGTTTTGGTTTTTTTGATAAAGGTTGGGTTTTAGTTAGTGTT
GCGATTTACGTTGCGTAATGTGTGTTGTTTGGGATAGGAAGATGATTGCG
TTAGGGTTAATTGGGTTTTTAGTGTTTGGTTGATCAATGCGGATGATTTG
GATTAATAATTGAAAGGCTTTGCTTAGTGAAAATGGATTGAGCTGAAAGT
TGGTTGATTTTGCTGAAGTTTTTGGAGGTTGAAAGATATGATGAGATTTT
AAGAGGGACGCTTATTTCTAGGATGATCATCTTTCTTGTTTGATTTTTTT
AACGAGTGAATTCTCGAGGATATATAACATTTGTATATGCTTGTTGTGTT
AGCTTGTGGTTTTTAACAATTCCAAATTAGTTTAAGTTAGACAAGATATT
TCTACATTAGATAAGATGAATGTTTGTAGGTTAAATTTTGGGGATAATTT
AGAGGGTTGGTCTAAAGGTGGTTGCTTGTTAATTATAGTTCCTTTATGAA
CAGTTTATTTGGGTTCTTTTTATAATTGGATAAGTTCTTTTTGCAGCTCT
GTGTTGGAAGAGGAGGAAGAGCGTGTTGCCCACATTGTGGAGCATCTCGC
TTTCAGTGCGACTAATAAGTACACGAATCACGATATTATAAAATTCCTTG
AAAGTGTTGGGGCAGAATTTGGGGCTTGTCAAAATGCAGTCACGTCTTCT
GACGAAACTATTTATGAGCTGTTTGTTCCGGTTGACAAGCCTGAAGTTTT
ACCTCATGCTATTTCTATATTGGCGGAATTCAGTTCAGAGGTAATAATGA
CTTTTTGGTTGTTTTATAAGTATTATTTTTATATCATATCCTATATCTGA
TAGTTCCCGCCTTATGCGTAGTACAGATTCGGGTGTCATCAGATGATTTG
GAGAAAGAAAGAGGAGCAGTTCTGGAAGAGTATAGAGGTACTAGGAATGC
TAATGGAAGGATGCAAGATGCACATTGGACGATCATGATGGAAGGTTCAA
AGGTATAGTTGTTGGCAGTTTTTAAAATAATTTTTGTGGCTATCAACTAG
CAGTCGATGAACTTGCTTCTAGCTTATATAAAAAAGCACAGCCTGTTCAA
CCTGCTTATTAATGCTATCTGTTGAGTATAATTCCATTTAAGAAAACATC
TATTTGTGATCCTCATTGTACTGTATAAGTTTTTTTTTTTTTTTAAGATA
AAACCTAATATGTACTTGTGCATTGANAAGATAAAACCTAATATGTACTT
GTGCATTGACATGCTTACTATAACAGCCTAAGAATTGAAAGTTAGGTGAT
CAATTCTTTTGTATATCTAGTACCATCGATACGAGTTTGGTGTATCCTGT
TTGAGTTCAAATATGGCTGTATATTACTCGCGACTGTAATTTGAGATAAC
TATACTTTGATATGGTTCAGTTTAACTGACCCTATTGACCTATTTTGCTC
TACCCTATGAAGAATACATCATATATGCTCACTGTTGTTTGCAGTATGCC
GAACGTTTGCCCATTGGACTGGAAAAGGTGATCCGAACTGTCTCGCCCGA
GACTGTGAAACAATTTTACAGGAAATGGTATCATTTGAAAAATATGGCTG
TAGTAGCAGTTGGAGATTTTGCTGATACACAGGTCTAAAATAATTTGCAT
TATCTAGCTATTTATAGAGTACTTGTTTATTTCATTACAGAGGTGTATTT
AATATAATATGCTATCAACAAATTTAAAAAGTCCCCACTTAGTCTGATTA
AATCTTGGAGGCCTCTATTGATTTATTGTTCCTTGAGTCCGGCCAATACC
ATTATTGTGCAAATTCTGCCACTAATCTATAAACCTATGTAATTTGGGAA
TAAAAAGTGTCAAACCCAATCATGTGCTAGCTTATAATAAAGTATAACTA
TCAAATAAACTTGTAACGCTGAGTTTTAATTTTTTAACTATCTAATTTTT
TCTTCCCTCCCTCTCCTACTTCATATAACAGACTGTTGTTGAGCTTATAA
AGACGTATTTTGGAAATAAAATTTCAGCACCGGATCCTCCTTCTATACCA
CACTTTCCGGTTCCATCGCATGAAGAGCCACGTTTTTCATATTTGTTAGA
ATCTGAAGCTGCCGGGGTTAGTTTGTTGTGCTTTTTTTTTTTTTTATTTA
ACTGTACTTCCTATTAACTGTAAAATTTTAAGCTAGCTAATTCTTTTTAT
GTATAATTTAAGTCCTACAGTTACTATCTTTAATTGGCCTTCAATAGTCT
GCAGTTATAGTAAGCTGTAAGATGCCAGCGGAGGAGCTGAGAACTGTAAA
GGATTACAGGGAATTACTTGTTGAGTCCATGTTCTTTCATGCTTTGAACC
AGAGATTCTTTAAGATATCTCGTAAGAAGGATTTACCATATTTTTCATGC
TCGGCTTCTGCTGATGTCCTTGTTCGGCCAAGTAAGGCCTATATAATAAC
TTCTTCTTGCAAAGAGAAAGGAACTATAGAGGCCTTGGAATCAATGCTTA
CTGAGGTGTGCATTGAATATCACTGTTAAGGCTTTCTTATTGTTCATATA
CTGATTCTTATCTGTTAGGTGGCAAGGGTTCGACTACATGGGTTTTCCGA
GCGCGAAATAGCTATAGCCAGGGCTTTGTTAATGTCAGAAATTGAATCTG
CCTATTTGGAGCGGGATCAAATGCAGTCAACCAGCTTACGTGATGAGTAT
TTGCAAGTATATTACTTACCTGCCTTTGTCTAATGTTTTCTTTATTGTCA
TTAAGTTTTACCTTCTTTCAACCTCTTCTATTCCAGCATTTTCTCCATGA
TGAACCCGTCATTTCAGTCGAGTATGAAGCACAGTTGCAGAAAACTATAT
TACCTCGTGAGTGTTTATTGATTTTTTTTTCCCTTTCTATTAACCACCAA
CCATCTCCTATTTTTCGCTCTAGGTTACTGTCCACAACTATTTCTATATG
TTTTGGCCAATTTTACATAGCTGGATATAACATTACATGAAGTAGGCTTA
TCCACGCTACTTTTCATTTGATAGAATTTTATGGCATATTAACTTCAAAT
AATGATTTGTTTCCCAGCTCTCCTACTTCATCGTTACAATTTTATGTCAT
AAATCTGCTTTCCTCCAACCGTCTCCTATCCTTTCACTCTAGGTTACTGC
CAACAACTATTTCTACACGTTCTGGCCGATTTTACATGGCGGGAAATATC
ATCTCATGAAGTAGGTTTTATCCACCGCACTATTCATTGATAGAATTTTA
TGACTTCTAACTTCAAGTAATGATTTGTTTCCCAGCTTTCTTACTTTATC
CTTATAATTGTTGGAAATCTACTTTCCCCAGATTATAACATCGGATGGAT
GTAAATGAATGGAGTTAAATAGATACGCTTAAAAGTCACACCTCTCTATT
AGAAAATTGATTTCAACTTGGAACTTTGAGGAGAAAGTATACACAACATA
AAAATCTTAGAGAAACTTGACAATATACATCAATAATTGTATGGCCTCTG
AGTGATTGACATGTTTTACGAAATATTTTCACCATTAAGATAGTGATAAT
TAGTGAGTATTTAGTACTGGTATAAGAGTTCATTTAACATCAATAATCCT
TTTTTTTTGTTACTGCAACTTAACTAGACTGCTATTCTCACACAAATTAA
TAGCTCCCACATTTTTTTTAAATATATAGATGTATCAGCATCTGAAGTAT
CAAATTATGCGGAGAAATTTCGAACATCGCGCAGCTGTGTTATTAAGATT
GTTGAACCTCGAGCTACTTCAACAGTAGATGATATGAGAGCTGCCGTCCT
TAAGATCAATTCTTTTGAGGAAGATAAAAGCATAGCTCCTTGGGACTATG
AACACATCCCTGAAGAAGTTGTTAGCGTAAAGCCGAATCCTGGGTAAGCT
AACAGATATTAAATGTGCAGATTCTTGTAATCTGAAGGAAACTCTTTTTC
AGTTTAGTGTAGATATCTGTTTTTCTTTCTAATCCATGAAATCCTAACTT
GTACATTATTAGGTGTTGTAGCTTAAAAATTTAGCAGAAATGTAAAGACA
AATATATTTGGTTAGTATGGACATGCTAAAGTTGCCAACTTGCCATAATC
TAACTCATTAGAGAAGTTGTGAACAAATATGTAAGTCTTTCATATATTCC
TGCAGTAATATAATGCAGCAGTTGGAAATCTCAAACATTGGAGCTACCGA
GTTAATTTTGTCAAATGGTATGCGAGTTTGCTACAAGTGTACAGACTTCT
TTGATGATCAGGTATGATAATGCCTCCAAACCAACAGATTTGAACAAGCT
GATAAATTATCCTTGCCCTTCATCATATATTATTTTGTGATGCTATGACT
TATCCACCCTTGCATTTCGTTGAGATGATGACTACTGGCATGACTTCAAT
TATATTTGAGGCATAGATCTACTTAGAGCTATAGTCCCTACTATGTATAA
AACACTTAGTTGATTATGAGGTAGCAGTTGCCATTCAGTCATTCTGAAAA
TTTTAGACTGGTAACTCGTGTATGTACTATACCACAACCACAAGCAGATA
ATCAGTTTAATTATAATCGCATCACATGGGAGTTGGTTATGTTGTATTGC
TGCTTAATGCATAGAAAATATATATAGCTTTTTATATTTAGGTTTAACTT
TTGCTGGAACAGGTAATATTCACAGGGTTCTCATATGGGGGTTTATCTGA
ACTACCGGAGAGTGAGTGCTACTCATGCTCCATGGGTTCAACAATTGCCG
GAGAGATTGGTGTGTTTGGTCATAGACCATCAGTGATAATGGACATGCTT
GCTGGTAAGAGAGCTGAAGTTGGTACAAAACTTGGACCATATTTGAGAAC
CTTCTCCGGTGATTGTTCTCCTTCAGATTTGGAGACCGCCTTCCAGGTTT
GCTCGAATATTTCTTTATGATTTTTTGCTTTTATATGTTCAAAATTTATG
CATGCACAATATTCATGTATGACCTAATACAAACCCGAAAACAAGCATTT
TAGCATGCTTTTATGTATGACAGTGATATTTGGTGTAATTCGTATTTGTC
ACGTTGTGTAGTCCTTATAAGGAGGCTTTTAGTTTGGGTTTAGGGATCCA
GGAAATCATTTATATTCTGAATTTCGGTTGACACATAATTCCGCAACAAA
TATACATATAATTAGGCTGTTGTATACTCTTCTAGTTCCTTAATATGTAT
GAAAAATGTATTCAAAGATATCAGTGCGCAAGAAGTAATTCCAAGAGTAC
TTGGCACCATTTGGTAGCTCCTCATCATTCATTTTAGCAGTATGTTACGT
TTAAGAGAAGTCTATCTACAATAATGGAACTCAACAGTATCTTTTCCCCT
CGCTTTACCCCTATTGATCCTTGTCGTTTCTGCAGACAGTCAGTCAAGTA
CAATGTAGGATGTTACTGGGCCGAGGTTGTAAGTATCATCTTTAGGTCAG
GACTAAAATTTCTATAAATGATCCCGTCCATTTTTGGTCTTCAATAAGCT
GGTAAGAATTTTTCACTTCCCCAGATGGAAGTAATGAATTAAGCTTTTGT
TAATGTAATGGGGATTAATGGATTACAGTAATGTAAAACAATTTACTCCA
GTAACTTAAGGTATGGGGATTTCTACTATGTGTGATGGTACTACGTGTCC
GTTAATCAATACATCTCTCTAACCCTCCATGTCATATATATACAACACAA
CTTATTTTCTGTTATATATAACAAGAGAAAAAAATTCTTGATGATAAAAT
GTAAGTGAAATATTATCCCTTGTGTTTTGTCATATTATCATATATATTTT
AATTATTCTGTTTCCTTATAATCATATGAATTCCCTGATCAGTTTATATA
TTATTTTGAAAAAGAAATTCATATAATTATTTCAAAATCTCAAGATTTTT
GAGACATGTTTATACTAATTCAATATGAGTCCCATTTATAATTATACGAC
TACCAAAGGATTAAAAATCTAAGGATCATTAGCAATGGGAGATTATAGTA
TCCTTTGTATATACTATATAGACATACTTGAGATGGATAATTTGTGAGTT
GTGAGATTATATCACTGCTCAAAGTATCTCATCTGTCATGACATGCGGCG
TATGTTCAAAGAAGTACTAGACTGTACGCATATGCTGTTTCATATCGTAT
CTATAAATAGTGCATTATCCATGGAAAGCTGTCCCCAATATTTTGTCAGT
CTCTTCTGGCTTATGAGCATTTATATTGTAGTTGGATCAGTTATAATTTA
CTGATATCTAGATTATGGGCCCTTGAAGCCCGCCAAGTATCTTTGCATTC
TCTAAGTATGGTTATTAGCCTCGAGGTCAGTTTTTCACATGAGCATGAAC
CAGACACATCGATTTATTGCTTCACTATTATCTTCTTTTTCAGTGAGTTA
AATTAATCATATAGACTCTGAAAGTAGATGATATAATTTGTGACTATAAG
ATTTTTAATAAAAGATTATGATCTAAAATGTGAAGCCAAACTTATAATTT
TCTTGTATTTCTCAGCTGGTTTATCAGTTGTTTACAACGAAGGTAGAACC
AGGGGAGGAGGATGTGAAAGTGGTGATGCAAATGGCAGAAGAAGTAGTGC
ATGCTCAGGAGAGAGATCCTTACACTGCATTTGCAAATCGTGTGAGAGAG
CTCAATTATGGAGATGCCTGTTATTTTAGGGTACGTGTAGGAAAATATTT
ATGATGCATATATTAAAAGATGGATTGTTCCCTGGATTAGCTACTCATGT
ATTTTGGAATGCAGCCAATCAGAATGAAGGACCTTAAAAAAGTTAATCCA
TTCAGAGCTTGCGAATATTACAACAGTTGTTTTAAAGATCCTTCAACATT
TACTCTTGTGATTGTTGGGAATATAGATCCTGCACTTGCCCAGCCATTAA
TTTTGCAGTACTTGGTAAGTGGCATACTTCGTGGTAGCTTCTTCGGAAAG
TTAAAACAATTGATACATTATGATATATGGTGCACTATTTGCTTGCAGGG
TGGAATACCTAGACCTCTTGAACCAATTTTGCACTTCAATCGTGATGACC
TGAAAGGCCTTCCGTTCACTTTTCCGACATCAATAATCAGGTAGCTTGGT
GTTTATATTTTAATGAGTTGTTTAAATATTGCTTTTAGATCTTTACATTC
TTTTTGCCACTTAAAAGTGAAATTTTGAGTTGCATCAAGTTGAAATGCCA
TCGAGTTCATAGGGACACTAGCCTTGTTAAACGAATCTCTATATGATAGC
CTTGCATTTCATTATATAATGCAATATTTTCCACACTGACTACTCTGAGA
ATCACTTTCAAGCAATCATCAAATTCTTATGTAGAGAAATTGTTCGAAGT
CCCATGGTGGAAGCACATTGTTTAGTTCAACTGTGCTTTCCTGTTGAGCT
GAAAAATAAAGATATGGTATGTATATCCTTTATTGCTTTAGGGTAAACTA
AATCGTATGGGACAAGATAGAACTGACACTTCCATGATCTCTGATGTTTG
ATGCCTCTTCACCTTTCCAAACTTGTAGGTGGTGGAAGAAACTCATTTTA
TTGGGTTTTTGAGCAAGCTGCTTGAAACCAAACTATTGCAGATCCTTCGC
TTTAAACACGGGCAGGTGTGTAAAAGTTTCGCTGTCTTGCTTTACGTGCA
CTACTTTGTTTTGTGGCCTAACATATATCTGGGATCGTATATATGTCTCA
AGATTTACTCGACTGGTGTTTCTGTATTCCTTGGGGGTAATAAACCTTCT
AGTGATGGTAATGTACGCGGTGACGTAAGTGTAAACTTTTCCTGCAAACC
AGATATCTCCTCGAACCTAGTAAGTTCATTGTGTGCCTTTCTTGTTGTTA
TGCTTATGCATTTATGCTTTCAATAAGCTTACATATCGTAAATCTTTCTT
ATAGGTTGATCTTGCTTTAGATGAGATATTACGTCTTCAGGAAGAAGGAC
CGTCGGATGAAGATATTTTAGCTATCCTTGAAATTGAGCAAAGGACACAT
GAAAATGGACAGCAGGTAGCTTCTATAGTTTAGTATCTTGTGATAATGAA
CCTTTATATAAAATTGTATTTACACTCCACACTTCACAATCTTGATCTTT
GGGCCATCAATCTAAGATATGAGTACTCACCAGCTTGCTCAGATTCCTCA
GCATAGAGGCCCTTCCAGTATCCATATCCGTATGGAGACTGAAAAAAGGC
GATGATGTGCTAGAAATAATACTTTTAAATCGCAAGCGCACGATCACCGT
TTTAATATTTAAGATTCGATCCACAGAGATTAAAATTATTTTTCGCAAAT
CTTTATTATTAACCTAGGCGGTTTAGAACAATTAATGATGGAGATGATAT
ATTTTTCAAAACTAATTATGATTATTATAAACTTTAATTGAGAATCTAAT
CCAATTATTCTTAATTAACCAAAGTTAACCACAACAATTTAATATCAAAA
TCAATTAATCGAGTGATGACACAGCTCGGAAACAAGAGATTGCCAAACAA
TTTTTTTTTTTTAACCACATCTACTGATCAATCAAACCAACTCAAATAAT
CTAAACTTACTAAATGCAGCTTAATCAAAACCAAACCAACTCAATGATTA
CAAAACTCGATTAACAGATTTAAAAATTCGAACACAGAGCAATTGAAATC
TAAAACAACCTCAACAGCTCAGAAACAGAGGCTGCAAACTCAGAACATTA
AACAGCATCAGAAAAATCAAAACCAACTCGGAACTTTATGTGCTACTCGT
ACAGACAACTAAGCCATGGCAGACTCGGTTATAAAACAGAGCTCACTCGG
CAGAAAAACAGCAGATTCTAATAACAGTAATGCAAACTCAGACTAAAACT
CAAAACTCGGTAACGCAACTCAGCAAAACAAGAAACTCAGCTAGCGACTC
AGAATCATAAACTCAGCCACAGGAAACTACAGCTCGACACAAACCGACCC
AATTGACTTGACTCAGTATAAACGAATTCAAACAAAAGACACCAGCTGCG
AACTCAGTACTGCTAAACTTCGACCAACAGAAATCAAACCCAGAAAACAA
ATGAAGCAACAAAAACGAAGCTAAACAAATGAAGCAACAAAAACGAAGAA
ACTCGGAGAAACGACTCGGAACTCAGCACAGCCAACCAAACCCAGCAAAA
GCTATGACTCGATTTACTGGACTCAACTGAACTCAGTGCAGCGACTCAAC
TAAACAGAGTAAAAACAGACTCGGGAAACTTGATTTAGACTCAGCAAACC
GACTCGAAAACTACTACTACTACGACTCAGTTTAAGAAAACAGACCCAGT
ACTCCGTTACCATCGACTCAAACAACTCACGATTCAGAACTCATAACAAC
CAAAACAAATCGGCAAAAACGAAACTACAGAAAAGCAAGACTCGAACTAG
TAGCACACTAAAAAAAACAAACTCTGTAGTAAACAAAACAGAACTCATCA
TTCAACATAAACCCAGCAAAAGATTCGACTAGCAGTGTCGAAAATCAACA
GCTCAACTCGGTTATGGCGACTCAGCGCGTAAACACAATAGACAGGGGAG
ATGGAGTTGTTTTAACTAAAAAGGAAACAGGGGAAAAAGGGGTTTTGTAT
TCAAAAGTGAAAACAGAGCATACCGATTTAATAAAGAAAACAGAGTAAAT
AAATGGGGGGCTAACCGAGGGTTTTAAAACTAATTTTATATAATATTCTT
GTAATTACTACTTAGCAATTTAAGCAATAAACTAAGACAAGAAAATTTAG
GGTTTTAAATCTAAACCCTAACACAAATTAATTTTGTGCTAGGACTTAGT
TTCTTACTAAATCAAATCTATAATAAGAGATCTATACTAATCACAAGTTT
AATGATTCTTCATTTCCCAAAAAAAAAAGCTTAAAAAGCATGTGGTGGTA
CTTAGAAGAATCATTCAATTTGGAGAACATAAATTAGAAAGACAACACAA
GATTAAACAAAAAGAGATTTGCATAGAAATTAAAAAGTGTATACAAGCTT
GGAAAGGAAATTGGGGCTAGCAAAATGTAAATCTATCTAAGATACTAACT
ATAGAAATGACTAGGTAGAAAAGGAGAGTAGGTGGCTAGGTTTTCTAGGT
GCTAGGTTGGTGATTACAAGTAAAAGAAGAGGGGTATTTATAACTAAAGA
ATTAGGGTTTAGGGGTAGGGTGGCTCCATCTTGACCATCCATGTGCCTTG
AGTGTTGGGAGAATTGTGGCCATCCATGTGTCCTTTACTTGCCAACCCTT
TTTTTTTTTCTTTTCTTTTCCCTTTTCTTCTTTTTCTTGCATTTTCTCTT
CTTTCTTTATTTATCTACAATTTCCTGAAATAAAATAAATAAGCGATTAA
TACTACGAAAATAAACAAAAAATAGGTACTTAAATATGCAAAAATATGGA
CTAATCAAACTTCCCCATACCTATCTTTTGCTCGTCCTCGAGTAAAAATC
AAAAGAAAAGAAAATAAACTAAGAAAACTAGATGCGATTCCTAGGCTCCT
TTTCGTAGGCGTGACGGGTGATTTTAGGTTCACCAACCCGTTAAACTCGT
AGACGATCTCTACAAGAGGAGTTTTGTCTCCTAAGGGTTTACAGAAGATA
TACCCATAAAATCTTCGAGACATTCTAGCAAGTGTCTACTCGACTCTACT
CTAATTTCGTTGGTGTTAACAAAAAGCGTTTTTAAGGAAAATACGACTTA
AAGACTCATCTACTAATAATCAAGATACAGTTGTCTCTAATCTACTTGCA
TCGACACAAAGATTTACTAGAAATCCAAGGAGTGTAAGTAATTTAAGGCC
TTTGATGGATCCTAATTGTCTAAGAACATTTTCTCTTTTTCAACCAATTT
TGAACTGACCCAATCTCTATCGAAACAAATATCTAGCCAAACTTCACAAA
CTTTTATTCTTCTCCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTGCATTG
ACTTTATTTTGTCCGTTTTCTTAGGCAAACAATGTTACCCATGTAGCGAG
CTTTGGGTCAGTGACTCCCAAACCAAACGGTCTTAGGGCACTAGGTTTTG
AAATCCCCCTACGGACTTAATTGCTCGAGTAACAAAGGCCACAAAACGAG
ACTAGCCAATCTACTTTTGCCCATTTATCTAAAGATTTTATCTATAAAGA
ACAATGGGTATTGAAGTAGTTATTCCTTCTTTCTTTTTTTTCTTTTTTTC
TATCTCTCTTTTTTTTTTTTTTTTTTTATTCGCAAAGGTTCGATTCGACA
TTGTTTCAACATGTGGGTTCTCTCTCAGGTATCGAATAATATCACTAGAC
AATCTCTCCATCAAAGGTCTCGTGCAAAGTGTGTGCCATCTTGGAATTTA
GAGTACAAATCGGTCGATACAAGCTTCAAAAAGACAACCTTACTCAACTA
CGTTCAAATTATCTAAAAGACACTACATATATATACTTTTCGAAAACATG
CTAAACACCAACTACTCCTAAAGTTCGAGTGAGGGAAAGACAACTTAGCT
AAAAGTATCTCTATTTTTGGATTTTTCTAATTTTTCATTTTTTAGGGTTT
TTCATTTTTTAAGAATTACACTAAAGCCCTCCCCATACCTAAATCATGCA
TTGTCCTCAATGTATGCAAAAGAGAGAATTGAAATGAGAGAGTAAAGAGG
AAAAATACCTGAATAGGAGATGAAGGGATTTTTATTAACTACTGAAGCAA
CTTACATGATCAAGGGTCGATGAGGTGGATGACCTCTTCCTCCGAATCAA
CAGGCAATTCTAAAAATGGTTTAAGACGTTGACCATTAACTTTGAAAACA
TTACCATTTTTAGGATCCTGAATTTCAACAGCACCGTGAGGAAACACAAC
TTGAACAATGTAAGGACCGTCCCATCTAGAACGCAACTTACCGGGAAACA
AATGAAGCCTAGAGTTGTAGAGAAGAACTTTTTGGCCGGGAGAAAAGGAT
TTTCTCAAGATGGTCTTATCATGGAAGGCCTTAGTTCTCTCTTTGTAAAT
TTTAGCGTTTTCGTAGGCATCATTTCTAAGTTCGTCCAACTCGGTCAATT
GCAACTTCCGATGACTACCGGCGGTGGGTAAGTCGAAGTTCAATTCTCTA
ATGGCCCACATGGCCCTATGCTCTAACTCAACCGGCAAATGGCAAGCTTT
ACCATACACGAGTCTATAAGGAGACATTCCTAAGACGGTCTTAAAGGCGG
TCCGATAGGCCCATAAGGCATCTATCAACTTGGTGGACCAATCCTTCCTA
TTCGAGTTGACCGTCTTTTCTAAGATTTGCTTAATTTGCCGGTTCGAAAC
CTCTACTTGGCCACTAGTTTGAGGATGATAAGGGGTAGCAAGCCTATGAG
TGATGGAGTACTTCTTAAGAAGTGACTCGAATTGACGGTTCTTAAAATGC
GTCCCTTGGTCACTAATGATAGCCCTAGGTGTTCCAAATCGAGAAAAGAT
ATTCTCTTTAAGGAATCGAAGGACAACTTTGTTGTCATTGGACCGGGTCG
GGATGGCTTCTACCCACTTAGAAACGTAATCAACCGCGAGAAGGATGTAA
AGGTGGCCAAACGAACTAGGAAATGGGCCCATGAAATCTATGCCCCACAC
ATCAAAGAGCTCTATAACAAGGATTGGGCTCATAGGCATCATGTTCCTCC
TAGTGATTCTTCCTAGATGTTGACACCTACTACATGCGGAACAATACTCG
GCGGCATCCTTAAACAAACTAGGCCAATAAAAACCGCATTGGAGGATTTT
AGCGGCGGTCTTCTTCGCACTAAAATGACCTCCACATGCTTGATCGTGAC
AAAACGAGAGGATGCTATGAAACTCACTATTTGGGACACACCTCCTAATG
ATTTGATCGGGACAATGTTTAAAGAGATACGGGTCGTCCCAAAAGAAATG
TTTCACTTGAGAAAAGAACTTGGCTTTATCATTCTTGGACCAATTCGAGG
GAATGTCACCGGTTGCTAAGTAATTGACTATGTCGGCGAACCAAGGGAGA
GTGGACATCGAGAGAAGGTGTTCATCGGGAAATGACTCGCTTAAGGGCAA
GTCATTAGTGGATTCAACCACTAATCGAGAGAGATGATCGGCGACGACAT
TCTCACAACCTTTCTTATCCCTAATCTCTAAGTCAAACTCTTGGAGCAAC
AATATCCATCTAATTAATCGGGCTTTAGAGTCTTTCTTAGAGAAAAGGTA
CTTAAGAGCGGCATGGTCGGTGTAAACAATGATTTTGGACCCGATAAGAT
AAGAACGAAACTTTTCTAAGGCAAAGACTACGGCTAGAAGCTCCTTCTCG
GTGGTAGAGTAATTGAGTTGGGCATCATTTAAGGTCTTACTAGCGTAGTA
AATGACATGAGGCCTCTTATCTATTCGTTGTCCTAAAACCGCTCCTATGG
CATAATCGGATGCGTCACACATAAGCTCAAAAGGTTGACTCCAATCGGGA
GACTTCATGATCGGGGCCGAAGTCAATTCTCTCTTAAGGTCTTCGAAGGC
ATGAACACACTCGCTTGTGAACTCGAATTTGACATCCTTAGCTAGAAGGT
TGGTCAAAGGTCGGGCCTTTTTGCTAAAATCTTGGATGAATCTACGATAA
AATCCCGCATGTCCAAGGAAAGAACGAATTTCCTTAACGGACTTGGGAGG
AGGGAGATTAGCTATTAGGTCGACCTTAGCCTTGTCTACTTCGATCCCTT
TTTCAGAAATTTTGTGTCCTAAAACGATTCCCTCCTTAACCATGAAATGA
CATTTCTCCCAATTTAACACTAGATCCGTTTCCTCACATCTTTTCAACAC
TCGATCTAGATTGTTAAGGCATTGGTGAAAAGATGGACCAAAGATGGAAA
AGTCATCTATGAAGACTTCTAGAAAGTCACCTATCATTTCCGAGAAGATG
CTAGTCATGCACCTTTGGAACGTGGACGGGCCCGTGGTTAGGCCGAAAGC
TAGACGTCTATAAGCGAAGGTTCCAAAAGGGCAAGTGAAGGTGGTCTTTT
CTTGGTCCTCGGGTGCGATTGGGATTTGAAAATATCCCGAGTAACCGTCT
AAGAAGCAATAAAACGCATGACCCGCTAACCTCTCTAGCATTTGATCGAT
AAAAGGCAAAGGAAAATGATCTTTCCTAGTGACGGCATTGAGCTTCCTAA
AGTCTATACACATTCTCCAACCGGATTGGACACGGGTTGGAACTTGCTCA
TTGTTCTCATTGGTCACCAAAGTAATGCCCGACTTTTTAGGCACTACATG
GACGGGACTCACCCACTTACTATCGGAAATGGGATAAATGATCCCATTGT
CTAAGCACTTAAGAATCTCTTTCTTAACTACCTCCATCATGGGAGGATTC
AACCTCCTTTGAGGTTCTCTCACGGGCTTTGCATCTTCTACCAAATGAAT
CCTATGTTGGACAATCGCCGGGCTAATTCCTTTAATGTCCGAGATGCTCC
ACCCTATCGCTCCCTTATGCTTTCTAAGGATTCCTAAAAAGTTCTTCCTC
TTGTGACGTAGTCAAATTAGAGGCAATGATGACGGGATATGAACACAAAG
TCACCTACTTTAATTAGCACATCTTCGATCATTCCCTTAGGAATTTTCAC
GGATCGATCGGCTAATTGAAGTGTGACATTGGTTTGTTGGAGCTCCCCTA
AACCTAAAGCTTGGTAGACAGAATATGGAAGGAGATTAACACTAGCCCCT
AAATCAAGTAACGCCTTATCCACAAAAGTTTCTCCTATGACACATGAAAT
TGTAGGACAACCGGGGTCCTTGTATTTCACGGGAATTTGGTTTGAGAGAA
TCGACTAATGTGAGACGTAAGGAAAGCTTTCTTAGGGACATGGTTGGTTC
TCTTATGGGTACATAACTCCTTAAGACACTTAGCGTATGAGGAGTTTGTT
GAATTGCATCTAAAAGGGGTATGTTGACCTTGACTTGCTTAAACACTTCC
AAAATCTTCTCCATTTGAGCCGATTGCTTTGGTGAAATAAGTCTTTGAGG
GTAAGGGACTCTTGGTTTATAGACTACTTCACTTTGCAACTCGGGTTCCG
GGTTTGGGTCACTCGACTCCTCACGGGCTTTTGAACACTCGGGTTTGTCA
TGATTAATGGTAGTGCGGGGTGGACTTGGGTTAGAAGTCGAATCCCCTTT
CTTACCGAGGTTCTCACCAACTTGGGTATCAACTTGTTTACCCGACCTAA
GAGAAATGACCGAATGCACATTATCCGGGGGTCTTTGATTAAGTGGAAAT
TTTGGGTTCGGCTCCGGTTGACTAGGGAATTTGTTCTTTTCTCGTTCACA
CAACGTGCTCGCTAATTGACTCAATTGGGACTCTAACTTAGAGACGGCTT
GCACATTGGAATGCAAAAGTTGCCTATCTTGGGTTAAAGTTTGCATGAAA
GTTTGTTGGGATTGGGTCAAGTTAGTTTGCGATTTCACTAAGGCCTCTAT
GCTCTTTTCTAAGGAATTGAGTCTCTTATCCGAATCATTAAACCCGGGAG
GATTCAACGGAGCTTGACTCGGGTTTTGATAATTCGGAAAAGAATTGGGA
TTGGGCCTAGGAAAATTAGGTTGTGGAGCTTGAAAATTTTGCCCTTGGTT
CCACGAGAAATTCGGGTGATTCTTCCACCCGGGGTTGTACGTTGGTGCGA
ACGGGTCATTTCTAGGCTTGGGTTGGAACATCGCGTTCACTTGCTCAAAA
TCTTGAGATTGTTGGATCTCGGAATGGGGAGCATTATAGTTCGGGAACAT
AGGCATAGATGAGGGGCCACTATGAGACTCTAAAGCCTCGAGTCTCTTAG
TAAGGGTAGCTAATTTGGCATCTGTTGCCACATTGTTTCCTATCGAGTGC
AAACCCCTAGAGCTAGACGCCTCGATCGACTTTTTAGGTTCCCTAGTAGA
CTCCCATAACATTGTTTTCTCGGCTAAGTCCTCGAAAAATTCCCACCCTT
GGTCCTCATCTTTCTCCATGAATTTGCCTTGGCACATAGATTCTAACAAA
GCGGTTGTTTGACTATCTAAGGCCTCGTACACAATCTTACAAAGTCTCCA
TTTCTCTATTCCATGGTGGGGGCATTGTGATAAAAGATTTTTGAAACGAT
CAAAGTAATTTACCAAAATGACTCATTTTCCCTTTGATGGAATTGATTTA
TCTCATTTGTAATTCGAGTCGTTTTATGGTTTGGAAAATACTTTTTAAGA
AACATTACCACAAAACCCTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGAATACTCTTCCTCGAAATAAAA
ACAAAAAGTGAGAAAACAAACTAATCCGAAAGATTAAAAATGAAGGTGCG
AAAAATTAATTATAATCCCCGGCAGCGGCGCCAAAAACTTGATGTGCTAG
AAATAATACTTTTAAATCGCAAGCGCACGATCACCGTTTTAATATTTAAG
ATTCGATCCACAGAGATTAAAATTATTTTTCGCAAATCTTTATTATTAAC
CTAGGCGGTTTAGAACAATTAATGATGGAGATGATATATTTTTCAAAACT
AATTATGATTATTATAAACTTTAATTGAGAATCTAATCCAATTATTCTTA
ATTAACCAAAGTTAACCACAACAATTTAATATCAAAATCAATTAATCGAG
TGATGACACAGCTCGGAAACAAGAGATTGCCAAACAATTTTTTTTTTTTA
ACCACATCTACTGATCAATCAAACCAACTCAAATAATCTAAACTTACTAA
ATGCAGCTTAATCAAAACCAAACCAACTCAATGATTACAAAACTCGATTA
ACAGATTTAAAAATTCGAACACAGAGCAATTGAAATCTAAAACAACCTCA
ACAGCTCAGAAACAGAGGCTGCAAACTCAGAACATTAAACAGCATCAGAA
AAATCAAAACCAACTCGGAACTTTATGTGCTACTCGTACAGACAACTAAG
CCATGGCAGACTCGGTTATAAAACAGAGCTCACTCGGCAGAAAAACAGCA
GATTCTAATAACAGTAATGCAAACTCAGACTAAAACTCAAAACTCGGTAA
CGCAACTCAGCAAAACAAGAAACTCAGCTAGCGACTCAGAATCATAAACT
CAGCCACAGGAAACTACAGCTCGACACAAACCGACCCAATTGACTTGACT
CAGTATAAACGAATTCAAACAAAAGACACCAGCTGCGAACTCAGTACTGC
TAAACTTCGACCAACAGAAATCAAACCCAGAAAACAAATGAAGCAACAAA
AACGAAGCTAAACAAATGAAGCAACAAAAACGAAGAAACTCGGAGAAACG
ACTCGGAACTCAGCACAGCCAACCAAACCCAGCAAAAGCTATGACTCGAT
TTACTGGACTCAACTGAACTCAGTGCAGCGACTCAACTAAACAGAGTAAA
AACAGACTCGGGAAACTTGATTTAGACTCAGCAAACCGACTCGAAAACTA
CTACTACTACGACTCAGTTTAAGAAAACAGACCCAGTACTCCGTTACCAT
CGACTCAAACAACTCACGATTCAGAACTCATAACAACCAAAACAAATCGG
CAAAAACGAAACTACAGAAAAGCAAGACTCGAACTAGTAGCACACTAAAA
AAAACAAACTCTGTAGTAAACAAAACAGAACTCATCATTCAACATAAACC
CAGCAAAAGATTCGACTAGCAGTGTCGAAAATCAACAGCTCAACTCGGTT
ATGGCGACTCAGCGCGTAAACACAATAGACAGGGGAGATGGAGTTGTTTT
AACTAAAAAGGAAACAGGGGAAAAAGGGGTTTTGTATTCAAAAGTGAAAA
CAGAGCATACCGATTTAATAAAGAAAACAGAGTAAATAAATGGGGGGCTA
ACCGAGGGTTTTAAAACTAATTTTATATAATATTCTTGTAATTACTACTT
AGCAATTTAAGCAATAAACTAAGACAAGAAAATTTAGGGTTTTAAATCTA
AACCCTAACACAAATTAATTTTGTGCTAGGACTTAGTTTCTTACTAAATC
AAATCTATAATAAGAGATCTATACTAATCACAAGTTTAATGATTCTTCAT
TTCCCAAAAAAAAAAGCTTAAAAAGCATGTGGTGGTACTTAGAAGAATCA
TTCAATTTGGAGAACATAAATTAGAAAGACAACACAAGATTAAACAAAAA
GAGATTTGCATAGAAATTAAAAAGTGTATACAAGCTTGGAAAGGAAATTG
GGGCTAGCAAAATGTAAATCTATCTAAGATACTAACTATAGAAATGACTA
GGTAGAAAAGGAGAGTAGGTGGCTAGGTTTTCTAGGTGCTAGGTTGGTGA
TTACAAGTAAAAGAAGAGGGGTATTTATAACTAAAGAATTAGGGTTTAGG
GGTAGGGTGGCTCCATCTTGACCATCCATGTGCCTTGAGTGTTGGGAGAA
TTGTGGCCATCCATGTGTCCTTTACTTGCCAACCCTTTTTTTTTCTTCTT
TTCTTTTCCCTTTTCTTCTTTTTCTTGCATTTTCTCTTCTTTCTTTATTT
ATCTACAATTTCCTGAAATAAAATAAATAAGCGATTAATACTACGAAAAT
AAACAAAAAATAGGTACTTAAATATGCAAAAATATGGACTAATCAGGCGA
CTGCTTGTGTGGAATATGGATTCACTGAATACATGCAAAGCAATATCCTG
ATACTGTCCTGGTTTTTATGCACTTTCAGGAAAATTACTACTGGCTAGAT
AAAATATTGAGCAGCTACCAGTCAAGAATATATTCTGGTGATGTTGGATC
TGCTTATGAGGTCAGTAGTCGGACTTTATTACTGTTGCAGCATGCTTCAC
TGCTTCAGTTTGTTTCTTTACCAAATTTTAGTGGTCTTTCTATCTTATAT
CTACTTTAACAAATTTGACAGTATTTTAGATGTCAGATCAACAAAATGAA
TACATCTTTTTTCTTAATATATTTATACACTCGGAGTATGTGCACTGAAA
TTTCACCTGGTCAAGTAATTAAAAGTGCAAGTGCTATCTATTTTGGATTC
ATTTAGTTCCTGTGCTTTAAATTACATATAGAAAGGGCACAATGCTCCAT
TTAAGCAAAGTCTTGGGAAGTTCAAGGCACACAGTCACACCTTTATATTT
TACAGAATCGCTGTTCATGGTGTATGAACCTGTGGGACCTATATAATATG
TACTATTTGAAACTTACACCTGATAAATGTTACTGCTTGTGTTAAGCAGT
TGTTATCTCTGTTTACTATTTTAGTCTTGCTTGCTCAGCTAGTGGACTGA
AAATATTTAATTCTTCACTCTTGGCTGTAGGAGCACTCATGAATCTGTTC
TTAATCTTACATTCTCAAAAACAACTAGTACTTATTCCATGTTATCGACT
TAAATTCATTTTCTGCTACAGCTTCTAGATAAATGTCGTTCTACAGTTAG
GGATAAATTGACCCCATCAACAGCACAGTTGGCATTACAAAGGATGCTAC
CTTTTCCTTGCAAAAAACAGTACACTGTTGTGATTCTCATGCCCCAAGAT
TCTCGCTTCAAATTACTGAAGTCATTCATTCCCTCCATAGAGTTCGAGTA
TGCTAAAAACGTGCAGGTCAGTATTATCTTTTTTGCATTGAAAGGTCTCT
ATTACTTGACATATGTTGTAGTTACATCCAAGGTTGTAAAAATCGGAACT
CGGTCCAACTCGGTTTGGTTCCGGAAAAATGAGTACTCGGAACTCGGGTG
AGTACTCGGAATGAGTAATCGGATAACTAATCGGGTATTTTTTTTAATTA
ATTTTTTTCTCTCATATATAGTTATTACTGATTAATAATAAAACTATCTA
ATAATATTAATATTTTAATAAAACACTTGAAATAATGAAGTTCAAATATA
AGTTAATTTTTTGATAGTTTTTGACATAATAATCATTCACAAGTTTTAAT
CATAAAACACATATACTTTCTAATTAATGTCAATACTTTACCAAAAAAAG
ATCAAAATATACATAAATTTACGTTTAGTCTCTTTTGAAATAATTTTCAA
ATAAAACAATAAAAAATTGATAAGTCAAACTCGGATATGACCTCGAGTAC
TCGGAGTCAAACCGAAGTTTGACCGATTTTTTAATAAATCGGTTTTGAAC
CCGATTACTCGGAACTCGGATCGGACGAGGGGTTAAAAACGAGTACTCGG
AATGAGTACTCGGCCGACTCGGCGAACTCGGCGATTTTTAGAACACTGGT
TACATCTAATATCTACCAACCAGATCAGATCACATACTACTATCTTCTAC
ATAAACCAGTATGCTTGTATTACTTTAGGCGACATTTCCGCTTTTTAAAA
TATTTAATAGTACTTGAATAATCTGTTTCTATTTTTGCAGGTTTTAGCTG
GCATAGCCGGCCTGACAGTTTTGGCTTTTAGTTTATGGAGATATTCAAGA
AACACATTAAAAACTTAAAAAAAAAAAACAAAAAACATTTAAATAGAATT
GAAGTTTTGCAGCAACTGCTCGAAATTGTATAACTAAATTGAGGTATAGA
TGCATTGTGTAGCATATACAAGAAAAGACCAGAGATGCAAGTTTAATCTT
CCCAAGGAAATTAGTTTGCGATTATGTCGTCTAATAGTTTAATGTGTAGT
TGTACATTCATTAGATTTAGCAGAATGGTTGAGACGTTGAAGAGGATTTA
AATGTGTGATGTAGTGCGATATAAATTTGTTGTATTCGGAAGACATGTCC
AATTTTTTTAATTTTTTAAAGCTGTGAGGCGAACTCAATAACTAACCA
Sequence Length:
25698
Sequence Checksum:
efef790a668b6c07f58f0e6d54ca1043
View location in JBrowse:
Gene:
LOC108199523
Gene Biotype:
protein_coding
Gbkey:
Gene