Resource Type:
Gene
Organism:
Name:
LOC108197047
Identifier:
LOC108197047
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017364525.1, is a part of gene, LOC108197047. |
| The genetic_marker, MK009834 8_22029052, is located in gene, LOC108197047. |
| The genetic_marker, MK009833 8_22029058, is located in gene, LOC108197047. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017364525.1 | XM_017364525.1 | mRNA | DCARv2_Chr8:22028564..22048953 |
Sequence:
GCAGCGAAGAACAAATTTAGTCTGAGAGTAGACACCGCCTTTATACTCTC
ACAAGCTCCGCAGAACATGCTCACTGTCTGACTCCTTGTTCAGGGTTTAG
GGTTTGTGGGCGCAAACACTCAGAGAGACACATTACACATACTATACCAG
GTCTCATTGCTTTTATTTCGATTTCTTACTTGTTTTTATCTTCCGATTAA
GCCCCTTGTCATTTTAATTGCTTATATATTGCCCCTTATGATTCTGTGTT
GTGTCGCCGTTCTATATGATATGATCATATGATATGATAATGATTGGCCA
ATGCTGCACTGTTAATTCATCTATTCTCACTTGTTGTGTCTCTTTGCTTT
CGTAAATCATGCTTATTGCAAAACTATTGATATCTAACCAGCCACCCTGA
ATTCAGAGTTGGAATGGAAATGCCGTCGAGCCCAGAACCGGCGATTACAA
CGGAGGGTTCTATTGCAGCATTCATGGAAATGATTCTTTACACTGCTTTG
CCCTTGAAGCCGCTTGATGATCCTCCGATTGAAATGCAGCAGTTAATTGC
CAAACAGGTGGTGATTGCAGTTCTTTTTTTTTCAATACGTACTTTATTTG
AAGATATTTTTTGATAATTATGTTATCAAGCACATTTGCAGTAAGTTAAG
GTTGTGGCTGCATGCAGCATATATGTCTTTTTTGATAATTTTAATTATCT
CTTGTTTGGCAAAGTGTGTTTAATGGAGAACTAGAATTTGAATAAACCTT
ATTTGGGATCCACAATTTGTAGGTCATATCTGTTCAATGGAAGACTTTAT
CATGTTTAGTAATTTTAATTTAGCTTACAAAAGCCTTCTCTCCTTAAACT
ATATTTTCTTACTTACATATGGAGGATATAGTAAAGAAGAGAGTAAGATG
TATGCAGTAAAATTCAGTAAAATTAGATTAGATTAAAAGTTAGCAAGATA
AAGATTATTACTTGATGTGTGACCTAATGATAATTAATTGATCATATTCC
TATAGGCTGTAGAGTAACAAGTTTTTTACTTTTATCTTCTATATCTCGAA
TTAACTTGGTATAAATAATGATATGCTTAGACTCACGCTGTGGTGGTGCT
ATACAACTACTACCAGAGGAAAAGACATCCAGACCTCAGGTTTCTTGATT
TTGAGTCATTTTGCAAGCTAGCAGCGACTCTGCAACCTGAATTGGTCCCA
TATATGAAAAACATGCATCAGTCTGATTACAAGTCCTCAGATGTCCCTGA
GGATCAACTTTCATTAACCGAGAAGGCCATAAAGGATGCATGTAACACAT
GTTTGGCTCTGGATGATGTTCCTGAAGATATGCCGATCAAGGAGGATTGG
CCGATTTCCAAAATCGTGGTTATGTTAGTTGATCCCACTAAAGAAAATTG
TCTCTATATCTTTGGTTCTGTAACTAGAGGGGTCTGGTCGTTTCTGGAGC
AAACTATTGACAATCATAAGCTCAGTTCAGATGGTGCAGTTGCGAGAAAG
AAAAGAAGAAGAATTAATAAAAAAGATCTGGTGGAGGAGCAATATACTAC
TGAAGCTGGATATGAGCAACTTGCGGTTCCTGCTATAATGAATTTTACAG
GTTTACGTCCTAAAGCATATATGAAATGTCTAATAATTTAAGATCATCTG
AGGGCATGTTTGTTTTACCTTAAGCGTAATTTATTACTTGTTATGTTTGT
TTTACCTTAAGCGTATTTTAAAGATAAAGGTAGGTTACAATTGTTCTTAA
AGCTGGATTTTGAGATGTAGATTATAGGTACATTAATTACTCATTTGTTA
TTTGTACTCGAAGTTGACAAAAACTAGTGTCACTACTTCAGCTTATAAGT
TCCATTTTTGAATTTAAGTAACAAGTAACATTGTTTAAGGTAACAATGTT
ACTCTTTTGGACCAAATTATCTCCTGTCATGTATTTACAGTCTCATCTGT
TGGGCGACACTTATCAATTCAGTTCTTATAAATAGGTTGCCATAATCTAC
TGGTATCAAATGTCCTAAGATTTTGGGTGACACTTATCAATTCAGTGTAG
GGGCGTTTCTTTCTTTCTTTTTTTTTTCTGTGGACAAACAACATTCTGCC
TTCAGGATAAAATAAAGCCTATTTAAACTTGCAAAGACTGTGTTGTATTT
ATCGTTTCATCATATATTTAATTTGCATTCTCTTATTTATGTTGTGTTTC
GCTTCTATATGAATTCTGTCGATTATACGGTGCTGTAGCACCTTGTTAAC
AGGTTTAGTTCGTGCAATACAAGAATTGTTTTTACAGTCCTAATTGAAAT
CTTACTGGACCATCAAATATAAACATACATATATATATATATATATATAT
ATATATATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NATATATATATATATATATATATATATATATGTATGTATATATAATTCTG
ACTAAGGCTTTCTCAGGCTTATATCTTTTTTGCTATCCATATTTTAAATC
TTATTATTAATATAATGAAATATGACATTATATCTTTTTTTTCTTTACTT
TTAGGATTTATTATACCTTTTACTGTCTCACAACTGGTACAGGTTTGAAG
AAGACTGATCTTGTGCTCTTGGAGAGCCATGTTGTGTACTCTGTAAGCAA
AGAAAAGACTGCTGCAAACTTTTTTATCGTGAAGTGTGCAGTGAAATTCC
AAGAAAAACTCAACATAACGTATTGGGTTCCTATGAAAGAAGTTGTTGAA
AGGTCTGGCTGGGCATTTTTTTTTTCCAGTTTTACTTTGGCAGATAAGTA
GACATTCACGTGTTATATATGCTTGCAGTGGATCTTGAATTTTGTTTGGT
TATGTTTTTCTTTTTCTCCCTAACAAAGCAAAAAATCTAGTATGAGTGGG
GTACAATTACAAAAGCAACAATAGTAATAGCAATAGTGACAATACTAATA
ATACATTTTTTCCTTCCCGATAAGCAAAAAATCTAGTATGAGAGCAGAGT
GCAATTTACTAATACTATATTATGGTTGCTATTGCTGTTTTTAATATAAT
ACTATTGTTGTTGTGATTATGATCCTCCTGATTGATCTTGCTATTGCTGT
TGATAAATAATTTTATTGTTGTTGTTGTTGACTTAGTTAGCCTGTTAACT
ATACTGATTACCTCAAGCTGCAGCACACATCGACACATTTGGAATTTAAT
TAATTCATTAGAGAAAAAGTTGCATTAGTCATCATGATTGCATGCATTCC
TGAACCTTACAATTAATTTAGGTTTTTGTTTCACCATATCCCTGGCATTG
GTATGAATGTTAAAATGCTAGTCAAGGGTTGTGCACACCCGTGTGTGTAT
GTATACACAGTTATTTGTGTACGCACACACGGACAAGTTTGGTGATGTAC
GTGCTTATGCTTACTTTGTATGATTTAATAATTATGAGTACCCGGCAATC
TCTTTTGCAGTTGTGCTAAATTCGAATTCAAACTGTGTTTTCATTATTTT
ATTAATCTTCTATTTATTATAATCTTTCGGACTAGTTTTGCGCTATGTTA
GTTGGGTCTAGAACATTTATGTGATATAGTAATGATTACCTGATACCATA
CTCATTGCTATGGTAGCTTGCAAGGTCCATTGGCTAATTGGCTTATAGGA
AGTTGGACACCGACTTCTGTGACTCAGAGTTATCATTTGCTTCCTTACTC
AGAGATATTGTCAAACTATTTTTCCAGGTAAACTTATATAATTATACTCT
TTTTGCTTTTAGTCAGTTCCTGTTTTGCATTTGTTGTATGCAATTGTTTG
CGTGTTGATGCTAACAAGTTAATAAGTTATGTGGTCTGTGATCTGGTTGT
TCATGTCTCCTAATTTTTTTTATTGTATAAAGTATAATAATGGTTCTAAC
AGCTCTGAACCCCTCAAAAACCTAGACTCATATAAATTACCAACACAAAA
TAATGATCAGGGGGAGAAAATACGGTAGTTTTGTAAACGTATACTTATAT
CCATATTAAAGGAGATGGACAGAATATAAAAAGAAAATGGAGCACCCGTC
ATCCCCATGGTCTCATCCACAAGCAAACAACTTGGAACTGTCTGAACTAA
ACTTGACTTTTCTTGCTTCTAAAGCTTTCCTTTAGTGATGCAAACTTTTT
CTTGCACTGATGTACAGTTTTCCCTGGAACTGCAGTTGCCCCTCACTCCC
AATGCTGCGTAGTTTCCTTGGGAAATGTTTTCAGTGCTTGCACCAGCGCG
TCTCTTGAACAGAAGACCGAACATCCTGGTCTGTATCTGCAGCATCCCTT
CCCCTCTATTGCAACTCTAAATCCAACTGCTAACATATACCTACACCTTA
CATATATACCCCTGCCTCCCTCCATCTTTCCCTGCGCCCCCTGCACCTGC
CAACACCGACAAACCCCAACATCATCTCTCTCTCTCTGCGCATCTCTCCC
AGCTTTCTACTCTGCCTCCCCTCCTCTCTCTCTGCCGTTGCACGTACATC
CCGACACCACCCACAACTTCACTCTTTCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTCCTCTCTCCATTCACTCTCCCCTCGTGTTGC
CAACCACCGTCGCCCCTCCATCAAACTTCCATCTCTGCCTCTTCTGTACC
CTACCCTCACAAGTGATTGACATTAATAAAACACATGGCAAACATAAAAC
TTAATAACTCAACTATATAACTTTGAAACCTTTAGGACAGTAAAACTATC
AATGATTCATATTCAATGAATATGACAGGAAGTAGATTAGTTATTGGCAT
AGAGTCCGTTTGGATAAACTTATAATTTTGACTTGTGACTTATCGTTGCT
TAATAGTGCAAAGTGAAAGTAAAAAAAGTTTAAGTTAGTATCTGTTTAGG
TAATTTTTTTATTTCATCTGACTCGTTAGTTACAAAAAAATGTGAAAATA
TAAATAAAATCTATAAGTTGTATATGTGAATGATAATATTAACATTTAGC
AAATAAAATTACAAAATAAAAGAAGTTGTTCAAAAAACTCATACTTCCGG
CTTTAAGCTGTTTTCTCAACTATAAGTCGCTTTTTAAATTATTACACAAG
CACACATTTTCTTAAACTTAAAGTCATCACTTTAAGCCGTGGAAGACTTC
CGCAAACTGGCTCATAGTGAATGCTTTTGTCATATTTACTGTGTCAATAT
ATCATTGTAGGTACAACTCCTTATCATCTCATTTACCAAATCATATGCCA
TCTCATTTACCTCAAGTGCGTCTACTATAACCCAGTCTTGACACTATCAT
GTACAGAATTAGTGTTTTCTAGCGACAGCTTATACCTTAATATTATAGAT
ATATCCTATTTAGTTGTTAAGCATTCAATCCTAATTAGAATTATAAATGC
AAGGAATCGTTGACACAACTACGTTAAGTTGATCGTAGAGATTAATTAAA
AAACCTACTATAACTATATTAATTTGGTCCGATTTAGGGCACTTAATGAA
CAGTTATGAAACATTTATCATCTATCCGAGCAATCTATTAAATAACCCTA
AACTCCAAGCTCTCTCTTAGGCTCTACACGCACACAAACAAGTAATAAAT
CCTTGACACCTAGTCATGAAAACAACATTAAACATTTGGCTTGCCACAAA
AGGGAATGTGCATAGAAATCTCAGACAAAAGCATACAGGTCCTAACTAAA
TAAATCTTTGCATAACTAATAACAAAAATTGAATAAAAACCAATATTCCA
ATTCCTCCTTTCTCATCGACGGAAACAAGAACTTACTTGAATATTTTTTA
AATGGGACGTACAAGATTCACTCCTCAATGAGGGCTTCCTTGTAAGTAGA
TCACGGCGAATATGACACGGAAAAAATAGGTCCCAACCTATGTTACCCGG
ACTCTTCATTTTGTGTCGAGTACCCGTGTCGGACACTCGACACCCGGACA
TGGGTATGGACACTCAGACACTTATTTTAAGCCAAAAACATGTAACATTT
TCAAATTATTGTCGAGTCCAACACTCGGACACGTATCCATGTTGGACACT
TTTAGCCGAGTCCGGGTAACATAGGTCCCAACTTGTATTATTAATCAAAA
CCGTTATCAATAATACAATCAATCAAACTTGGATACTCAAACCAAACAAT
ACTCAAGCATCCGCAAGCGATGCCGTTCAGCCTAATACAATTTCATAATA
GAAACATCGGTGGCCACCAAGACATGGACGTCCATCCACCAATGCCTCCC
CTCGAACAAGAATCTCCTCTATCTCGTTCTTCCAAACTTTGAGTATCAAC
AAATTCCACTTTAATGAGCTCCCGACCACCATTCTTCATCATAACAATAT
ATCCATCTACAAAATCACGTGCATCAACCACGAGTGCCCTATTGAATCAC
CCGATCCTTGCTTTCACAGTCCAAATAATTCACCTGGTTGATCAAACCAT
TAAAACCATTGTGATGATCCCTTTGATCTTCTTATACCTCGTATCCATCA
TGATTGATTTATGGTGCAAACCAACTGTCATACCTGTCATACCGCACGTA
ACTCTCTAACCACTTTCGTAGCTTATTGTTAACAATACCTTTATCGTACT
TTACATTCTCAATGAAATCCCGAATTTTCTTCCAACCTCATCAATCATGA
TCATGACCTCGACTCTTGATACCACTTGTTAGGAATAAAATACGAAATTC
AACTTCTAATGCAAAGAGCACACACAAAGATATATGACATGGAAAATCCA
CGTCCCAACTTGTGTTATTAATCAAAACCATTATCAATAATACAATCAAT
CAAACTTGGATATTTAGGCCAAACAATACTCAAGCATCCGCTCTCAAGCG
ATACCTAAGTCTACTAGATCTTGAGCACACATAACAAACACAATATGAGT
ATGTATCTTCTACATACTTCCGATACGTTTTTGTTGTCTCAATGTCAATA
TCTGATTATTACGATCTCTTTGTGTATGCAAGATGCATATTCAACATAAA
AGTTACTAGGAATTTAACTATTTATTTTTTATTTTTAGGTTTACTCTATG
AAATATTCACATTAATTTATAACAACCCTTTAATTTTTTATTATACTATT
GTTATTATCAATATCTAATCTTTTAGTATTATGTTACATCAAATGAATAT
TATGTAATTCTAATGCTGTGATATTAAATTTTAGACGTGCTTTAATCTTT
TAAATTACTATAACATAAATAATTTCATATAAATATAACATCAGCTAATT
GCTATTAGACCGACAGCCTAGAATGTTTCTTTGTCCCTTAAACTAAATCC
ACCCTTATTTTAAGCCCTGATTAACGAACTCTAATTGTATGGGCCATATT
AAGCCTTCATCTTAAATATTATGACAAGATATTAAGGGTTTATTTGAGCT
ATTGTATATCATAGGGACTTATTCTGTTATAAAAAAGACATTGGCTTTTA
CCCTTTAACCTCTACTAAGTTAAATAAAATGTGTTCATTTTGCTTTGGAA
TGACTACTGCCATGTCGTCCTATAGTAGATTTAGGACTTAGCTCAACTTG
TTATCGTATATAACAATGTTCTGTGCTTTTTATTAATTTCTGAATTCTCA
TGCATCTCAACATATATTAATAGTTCATATTAGTAATATATACATTTTTT
CCCCATGAAGACTCAAGCACTCGTCACATGAAGGAGAACATCAAAGGACA
ATTGGTGACAAATCCCAATCATCTCAAGAACTTCGCCCTGAAACAGATAA
GTGAGTATGGAGAAAGTTAGTTGTATATCCTTTTCTCCTTGTGCTCTTTA
AGAAGGCAACATATAAGTGAAAATATTACATGTGAACATATTAGTAGATG
TTTTGTGAAGCAGTTTCAATTGGACTGATGTTCAAACTGAGTTCAAGTGC
GAGATTATATCCTGCTCGCAACTAGATTACAGATGTAACTATGATAATAC
TGATGTAACATCTATTGCATATTTGTCATCATTTAGCTCTGTAGGATATG
TATGTGTGTATCCTAACTTATCTGTCAAGGATGATCTAATACCTAACCCG
GACTTCTGGATCTTCATTTTTTTAGTAGGTCCATTGGGCAACAACAATAG
TCTGTTTCTTGCTAAGTTAATAAGTTGATAGCAAGAAACAGATTGTTGAG
TAACCATACATCCATCTCCATACACATAATAGTTATTAACTCTGGATGCT
TATATCATGTATTCATGTTTTATAAGCAGTAGTCCGTCTCAGGTTAGCCT
TTTTCACTGTGTGATTTTTCAATGCCCTACATTCGCTTTAACTATTTTAC
CGAGTATCCGTTATATAGTATGCGTGCCAATCCTTGTTGTCTATCTTTTT
AGATCAAATCATGTACTCCACAGCCTTCAGTAGTACTGGCACTTACAGGT
ACAGTTATCATTTTTGAAATGTTGTGGTATCCTTCTTTTGTCCAAGAAAT
TTGCTAAAATGTTGCCTGGAAACCTCAATTCTGGAAAAGGCTTTGGTATG
TTAAGTCGTAAGCTTTACTGAAGATGAGAAACAGGAAAGGGAAAGAAACT
AAAAGGAGTCTTATATTTATATTACTAAATAGTTTCATACTATTTATATT
ATGGGAATTAGTGTATTTATTTATTTTGTTCTATGTGTGGCTTGTAGTTT
ATAAAATAGGTTATTTAATATAAGCCCAAGTGCTAACGGGCCATAGTCTA
TTAGGTTATGTTTCAAGGTTCTGATCCCTATATAAGTCATGTAACCCCAC
ATATAATAATTAGACATGATTTTTCAGATATATGTCGAATATTGGATTGG
GTATTTTATGGGTTGCCATCCATAGTTTTTATCCCTTCTGCGGCTGGGAT
GTCTCGGGGTAGTGGGTCTTTTGTGGTTTATCTAGCCATGTTTAATCTTC
GTTATTGTTTTTATTATATCATAATTGTTCTTTTTATAAGTTGTACTGCA
TCAACTGAGATGCAAGTTATTACTTGATTTCTCATGTGTCATTCAAAGTT
GCAGCAACATTGTGTACTGAGATGGTAAATCACTGTGATATCATTGTAAC
CAAACTTTGGTGTTGCTTTGTGGATCAAACCTCTTCTTTTTTTTTTTGGT
CATAGGATCAAACCTCTTTGGTGTAACATAATTTATATACATATATTTAT
CTTTAAACTTGCACACCTTTCAGTTGGTCACATGTGATTCGAAGATCTTA
GAGAAGATCAATGGGTACCTCATTTTATATGTCTCCGTGTAGAAAATTTT
TATGTAACCCTTTTTCCTCTAGGAATAGTTAATATGCTTTTCAGTGAGTG
TGTGCCCCGGCACTAGTGTGTCCGTGTCTCGTGTGTGGCAAATATGTAAT
TAACATCTGGAAAGCTGTAAGTATAGATTGTAAAGATTGCATGTTTTGCA
TCATATATATTTATAGATTGTAGCAGATTCTTTGTGAATTGAAGTATTGA
ACTGTCTATGATGGTATATGATCAGATATATTGTCTATATACAGATGTGA
TATAAATTATCGGTATATACTTGTAAGTAAGTAAGAACAAACTAATTATG
TTAATATGTATACATAAATCTATATATTAACCAGATCATTTGTGTGAATG
TACCTCAACTTATATGACTATTGTGACTACATGATATTATGCATTAGGAA
ATGACTACCAGTAATAGTGATTTAAATAAGGGTATATACTTTGGTAAGAA
AGTATAGCCTTAAATCTCTTGGCTTAGTGGTAATTTACCTGCAACCTGTT
AATTTTCCTCCCAATGGGACGAGGTTCGCTAAGAAACTGCCGGGTCCTTT
TTTCTTCAAAACACTATTTTCTTTATCATTGCTTCCATCTATTTGGGACT
GCACAGTGTTTTTGTGTTGTTAGCTGTTAAAGGCGCAGTAAGGAGCACGA
AATTCTACCTTTTTGCTTGAGGAGTGGTGACTTGAGAGAGGTGCGCACCT
CACCTAACTCAGGTTAAAGGTGCGAAGACACGCAAGGGGCGCCTCATTAC
GACACGTAGTTTGACCTATGTCAAGGAATATATCATGGACCTATCCAGTT
CTCGGATTCTATTTAACTATGTGCGATTCGTTAACTATAAGTATATATAT
ATATCTATCAAAGATGCAAAACTTTTTAGTTAACTTCTGTTTATAAACCA
TTGCAACCATACATTTTACATATATATATGTACTAAACAACCCTGAGTAT
TTTTGCTGATAATTCATGTGACAGAAGTGTACCAATTGTAATAATTACAA
AATCCTACAATGTTTTTAATTATTAGATACCATAAGCACACATAGTTTTT
TTTATATTTTTTTGGTGCGTGTTTGCCTTCTATATAATATCTTACTTCAA
GTTCCTTTTTTTCAGTAATACTTCTGTTATCAGGATTATTATGAGTTAAG
GTGATCAATTTCATTATACTATTAATCATGTTTATAATATAGAATCATGT
TAATACTCCTGATATGATATGCATTTGGTTTGTATATAGCTTATACATAT
GCCTCATTTGGTGGTTGCTCGGCTTATTTATTGATTAGTCTAAATGCGTA
TACTATGTTATTCAGACTCGGTTAAAAGTATCCGACATGGATACGTGTCT
GAGTGTTGGACTCGGCAATAATTTGAATATTTTACATGTTTTTGGCGTAA
AACAGGGCCTCAAAAATTTGAGGGGCCCCAAAATTTTCAAGCCCATAATA
TTTATACACTTATATAATTAATTTTATTTTTCATCATGTGTTGATTAGAA
TCTTTTATTTATATATTTTTTTGATAGTTAGTCGATTGTCATTAATATTA
TCATTATATATAAACTGATATAGTGATATTATATATTCTTATGTCAGTAT
TTTATTTTAAATTTAAGTATTGTGTATTAAATTATTTTTTGACCATCTTA
TATTTATTTACTAAATATTCTTAGTGAATAATTAATATATAATTGTTATT
TCTTATCACAAAATATATATTATATTATTTATTTTTAGTGTTAAATAAAT
TAATATATTTAACCTAAAAAAATTAATACGGCTCAGATAATGTACATGTT
TTATTAAATACTTTTCTTGTTTCAAGTTCTAAATTAATTTAAAATAAAAT
AAATCTATATGGTGTGCATTTTATTAATAAAAGGGTCCATATTTAAATTT
AGCACAGGGCCTCCTTTCTCATTAAGCCGGGCCTGCTGTCCGGAGCCTTA
GTGAGGCTCCAGTGAGCTCAAGGTGGATTGAGTGGGGTCTGGGGTGGCCC
TTGGGTGGGTGATGTCATCAAGGGGGTGGGTGATGTCATATTGGCCTAGT
TTTTCTTGGTTTGTATTTGATCACTGGCACACACACACATTCATATAAAA
TTATTTATGTTTCAGATCCAGGCACTGCGATAATAGTTCCAACTTCCTTT
GATTTGTACATGTTCATAATATTTGATTGTGCAGTTAATTTTTTGATGCA
CCTAATCATTGTACAATTTTTGCTGGACTCCACTAATTAACACATTTTAG
TATCTGCACTATCACCTGCTGCAGCGATCTATCTTTTGGTTGTTTAAACA
ACTTCAAAGTGATGGTGAGCACCTCTAGTTTCAATACAAATGAAGCAAAT
GATGCAACTATCATATCTCCAAATATGGAAGATAATATTGAAACTGGCAT
GGCTGGACCGACCTGTTCTTTAAGTAGTCTGCACACTGTGGATAGTGATG
AAACTGATGCAGTTTCAATCTGTAAAGAGGACAAAACCAAGAACAATGTC
TCATCAGGAAAGATTTATCAGCAATACAGAAAGAGAACATCGACAAGGAG
AGATGTTACTGTTTCAACCTTGAGTGTCAAGGACAAGGTTAGAGGCATTA
GTGCTATATATAAATCTATAATTAGTTTCTTGTTTTATTTTGAATTTTGT
TACTATTCTGCATGTCCGACATTTGACAATATAAAATTTTTGTGCTAGAC
TTGCTACATGGGTGGTAAAATGAGTCTGTCAATTATTTTGATAGTTCATA
GTGCTTAAAGTGCAATTGACTTACGTGTGTGCATATAATTGGAATGTATA
TTCAGATATAATAATCAAACTAGGATTAAGATTTTACATATATTCTGTCT
ACCGACGTGATATTTTTAATAATTAAAGTTAATAGAGTTTTACAGGCGAG
CCACACAAGTATATTGATATGGGGGCCCATCATGGCATGATATTGCCCTC
TTAACGTTGATATATGAACATTAAATAAGGCACGGCTCAGGTTCTTAAAA
AGACAACCGAGAGAACCAGCTACAAAAATCAGCTTTAAAAATTGATTTCT
AATTCAGAAAAAAAAAAACTTCATTGCTAGGCAAAAATTGAGTAGTTGAT
ATATATATATATATATATATATATATATAGGGGATAGTTCAATGAGTAAC
TCGTTTGTTTGGGTAACTTGGTAACTTTTGATCCTAGCCATACAACTCAG
CATGCAGGCTCCAGACGCTCGAGTATAAGAATAACTGTAATACCTAAACA
CCTAGTCATGTGTTTTATGTTCTGTATTTTCAAAACTCTTAATATATAAC
TGTAATACCTATCCACGTGTTTACACAGTAGTCCATATAATCTGTATTTT
AAAAACTTTCAACATATTTTAGTACAAACATAAAACATAAAAAATGTTAT
TTTACTCTTTGAACACACAACAAAAACTCAAATATATAACAAATATAATA
CAGAACATGTGAAAACATATAAAATAAAATATTTAAACAAATAAAAATAC
AGCACAAGCTAAAAATAAAAAATAAATGAAATAAACAATTCCATATTTAT
ATATATGAAAACAAATAAAATACTAAATATGTGAGAAAATACAGTACAAA
AATACAGGACATTGTATTATAAATTAAAGAACAAACATGTTAAGAAATGT
ATAATATAAAAATACAGGATATTATATTTGTTGTATCCTGTATTTTCATT
ATTCTTTCAATTTTTTTTATTTTTTAACTAGTAATATGAACAATATTTAT
TTGATATGTGTCTGCATAACTTGTAGTACATATTACTAAAATAAATCAAA
TCTACACTAAAATGGTACACATTTATTTTTATTTTTGAAAAACTTATGTC
CTGTATTTTATATAATTTAAATTCTTTATTTACAAAATAATCTTTAAGAA
AGTAGAGAAATATATGTTCTGTATTGAAAATACTTATAACTAATTTAAAA
TATAAATAAATATTATAAATCAAAGAACAAACATGTCAATAAAATTTAGA
GTAAAATAATACAGGACATTGTATTTCTGTATTAAATATTTTTTTGTTCT
TCACTTTTTATTTTTGTTAGTACGTGTCTACACAACTGTGCATGTTTACA
GAACCGTGTACCAACAGAACTTGACTAGGTTTGAAGAGAAGAAACTGTTT
TTCTTATATTTGCGCCGTGTCCTTTTTAAGTCTTAGAATAGTTCCTAGGT
TACCATTTTATGGGTTACTCAAGGAGAAGGCCCCTATATATATATATATA
TATTTGTAAATATGACTTGTAACACATTAAATAATCTGTTTTAGAATCTC
GGGCATAAATCTTTTCTTAAATTAATTAATGATAGTATTGATTTAAATTA
TAAAGCAATTATGGTGGAAATGAATATATGTAGTTTATAAAAACAATCAT
ATAATATCTTACAATTTATTTTAAACATCGTTCTTAGATTCTCTTTTTGG
ACACACACACACACACACACACACACACACACACACACACATTTACCATG
AAATATTTGGAACAATTTTCTTGTTTGTGCTTCCACTGAAGTATAGTATG
TTATCATTAAATAAAAGTATGAATAAAATTTTAACATAAAAGTATGAATA
AAATTAGCACCTATGGTATAAGTGAAATGTAAATAGTGAACTTTATAACA
TATTATATTTTTTTTATCAGATTATTATATTATCTATGTGATACACTATT
AACAATGACGGTTTTTCTATGTTAAGAACTAAAATTTATAAGTTTGACTC
ATTTTGATTGGCTCATATTTCTTAATAATGGTGGACCCCCCGGCATATAC
AACCACCACACCAATTAAAATGAACCAAATATATAAAATTTAGTGCTTAG
CATGTGCCCATGGGTACATGCTAGACAAACTCTACCAATGATAATGATCA
TTAATTATACAAGACACAGTAATTGCATATGCCTATATGAGTCGGATTTA
GTGGCAAATCACCTTAGCGCGAGAATTCGTGAAAACTGTCAACTACACAC
TTGTTTTATAATGTATTCTGCAATCAATTTATATTAAAGTATATATTGAG
GAATAATATTACAATTTTGATAAAATTTAGTAACAAATTTTGCAGAATCA
GTGATTCGGCACCCTTTTAAATTTTTAATAACAGTGATTCTACATATTTA
ATGCCAGCAATTTTTGCTAGATTTATGTTTTCGAGGATACAGAGGATATG
GGATTTGTAGTAATTAGAATGTAATAATAAGCATAAAGGCTGTTCTAGTA
CTAGTTAATAGTTAGTATGTACCTTTGAGAGTACAAGACTGGGGAACTAA
TTAATTTATGAGAATGCAATAAAGTTAAGTGTACTTGCGGTGCTATATTT
ATTGGCATAATCTTAATTTTCTTTGATCTAACTCTACATATTTTGATCTG
GGATAAAGAATTACTTTAGACAGCTTTCATACTTGCTTAAGATATACATA
GTGTTAAGTTATTATGTGTATACTATCATGTACCTGGTATAACACCTTAC
TTGATATACAGGAGGCAGCTGACCTTGAGGTTAAGCGGAATGTACCGGAT
TTCAAAGCTGACAAGCTGGATACAGTGAAGAATACAGTTACTGGTTTGGA
AGTTGACAATGTGGGTACTCTGAACAAGAGCTTCAACAATAACTCAGTGA
AAACAAACTCCCCAGAAAAGGTTGAGCCTACATCTTTTGCAAACGAGAAG
GAGTTGTATGTGGCTGATAAGGAGAAGGAGTTATCTGTGGCTGCTTTTAG
GGTTCTTCTCAGCAAAAGAGAGAGATTGGTATCACTAATTTGGCTTTTAA
GTTTTAAAATGTGATTTCTGTCCCTTGCTTTTCTTTTTATTCAGATCGGT
TATTCTTTTAGTTTAGTAGTGTCACTGTATCCATTATTTAGGAATTGCTC
CCCATATGCATGTTTTCTAAAATTTAATTGAAGTACATTATGCAAACTGA
GAAGACATACTACCTATCTGAACTCACAACCCAATGTGGACTATACATTA
TCTGAAATATATCAAGGCGTCATTTTGAGGAAATATATTCCCGGTAAAGA
AGTTTTAGGACGGGTATATCTTAGTCACAGCACCGTAGGGCTATTACTAA
TATACAGACCTGGGAAAGAGGCGGTAAGTGGGGGTACCAATTGATTGTGA
TGGTAGTGCATTTCAGGTATATCAGTTCCTTCATTAATTGAAAGCCTGGA
AATGTTTCTTTTAGAACTTTCGCCACGTCTTCACGACCCTAGGGTTTTAT
CCTATTTTAGTTTCTCTCTTCCTTTTATTACTTTCGTCTTCTTTCTTTTT
CCCTATTTAATTTTCATTATTGTTTAGGATACTTGTAAAGGTTTTATTGG
AAGAAACTTCTATTGAATCAGATCGCAAGCTAAGGATTTAGATCTCTATG
CGTCAGCTTGAGGGAAAACGGGTGTAGAATATATATGATTTGTGTTCATT
TAAAATCTCCGTAGAATATTAAATCGAACTGTATGTTTGTTTTAGTTATA
TATTTGCATTATGTTGGGTGACTTGCGTGCATAGAATATTCTGCTTTTGC
TCCTATATATCTGGTATATATTACTATATATAGCCTATTTGAAGGATTTA
CTGTCTACTATATAAATCTATTAAGCCTAATTTTCTACGTGTCAAGGAAC
AATATAAAGTATATCATCATATTACCTTTAATAATTAGCCCATTTGATTA
TATATATTAATCTTTATGACTTTTGAGTCATGCACAGAAAGAGAGCACCT
TGTGCTCCTCATAAGTACAGCTATGTTTGCTTACACTACTCTCTGTGCAA
AATCCTCTTACTCAAAGTGAGGGTGCGAATTGTTAGTGCCCCCTTCTTCG
ACATACTTCTGCAGGTCTAGACAGGGAAGTAGAGATCTAGTGACTGACCA
TATTTCGTTTTTTTAATGGCACTTTTCAACTGTTATACACAGCTGGCTGC
CTAGTATCATGCAAATTACCCAAACTTTCCTCTTAGCCAAACATCTCCTG
ATTTTAATGAATGGGAGGTTATATAAATTTACAAAGTTTGCGGCTCTACG
ACTGAAATAGACATCTTGACACTACCAATATGACAATAGAAACTCTTCTA
CTATGTTGATGTAATGAACTCCGTATTATGTGATGCTTAAACCAAATATG
ATAGTCCTTACCTCCTTTTAGTATGTTATTTTATGCCACCAAAAAGAAGA
TTAAAGCATACACCTTAAAAAGGTTGATCAAAATCTGATGCTACTGAAGA
CTAATTATGTTCCTAATTTGTATTAGGATGTAGTGCCGCTGTTTTTGGCC
AGTGATGAGTGTAAATAGTATAGTTAATGGCATGTGGCTCCACAAAGACA
TGTTGGTTAGATTTATAAGAATGTATTGTTCGTTATATCTAATATCTTAC
TCAATAAAAGCACCTCTTTTTTTTGGCTCCTTCAAATGTCGATTGATTTT
AATTTTGTAGTTCATTTGTGTTTGCAGACTCATCAATTGCGGAATTTAGG
AGATGAGATTGCTATATGTGATAAAAACATCCAGACAAAATCAGATGGTG
TGCTATCTCTAATTTTCTTCTTTTCTATTTATGCATGCTCTAAACTATCA
TTTAAAAGAATACTTCAATCTATATAAAGTGGAGAAGCTGTCCGGTTACA
AATTTATCTGATGTTGGTGCTCCGATTTTTGCTCATTGTTTATTTAGACA
CTGCATGTACTTCCATGTCAAATCTTCGATCAGGGTCCCCATCACCTTAA
CCATTCTGTTCATGTCTACTATTTGTTTGAATGAAACATATATGTACCAG
ATTCGTAGAAAGCACTCTCCTTAGCCTTTGCGTGAGGTTTGTTAACTTTA
AGCTGCTCTTCTCCATATTAGGGCTAGTAGCTATACTTTGGAGAAAGTTA
TCGTGACTCAAGTCTCACATAATATTTTTTGGTTTTCTGGGGTTTTGGTT
AATCACCCATATTATTTCAGAATGGTGATGGTATGATATTCTTTTTGAAG
TTAAACAGTATGTTACTACTATTGTGGAGTAAGAGGAATTGGCCAAGGAC
ATTATGTTACACAGTGAATAAAAATATAAAACTGTTAATAGTGGATCTCC
ACTATTGTTTTACAGATGCTCAGAGGTAGAGTAGAGGTGTTCCTAATTGG
TGATAAAAAGCTATAGAGCTTCCACAGATCAGCCAGTAATAACTTTCTAG
AAGCATTACTGCCAGTTGGACTGAAAATATGTCAAAGGTCACAATCTGTC
CTGAGTTTCAAAGCTATGAGATGCAATGTCATTTTAGTTAAAAAGCAAAT
GGTGATAAGTTAGTGTATGTAAAGTATCTTACTCCTAAAAAACCACTAAG
CATAAACTTAGAATGTAGATTATATTAAACAATATATTTTTACCACTGAT
AAACTTTATAAATCGCTATCAGTATCAACGTAGTCATCTAGAATTTAGAT
ACCCGGTACGGTACGTTTGCCATTTTCTATGCACTGGTAGGATTCCGAGT
ATATATTTTATTCTGCTAATAAATTATTGCACTTGTAATAGGTGGTAAAG
ATTCCTTTCCCCAGAAGACAGACACTTCTATTGATTTTCGCACTGAAGTA
TGTGTACAAAGAGAAGCATTTCAAGACAGCACTTGTCAGCATGCAAAAGA
TCAAGTTTCCTCTCAACAGGTGAAAGGGAAGAGCATTATTGAGGCTATGA
TTCCTGATCAAATATTTTGTCAGGCAAGTTCCTGCCTTTAATATTTTTAT
GTTTTTTCTTCATATATTTATTTAGAAGTCCTCTGAAATTTGATTTTGCA
CATGGTGATTTAACATCTTTCTCGGAGAACTATATGTTACCATCTTAATA
CGATTGGAAAGAAAGTATTCTTCTATATTTACCATGGAGTTGGAGGGATA
GTATTTTCTTGTTTGATCAGTCATAGTCTCTTAGAAATTGGAAATGAAAT
GACGACAAGTTTTTTCGTATCAGTTTCTTCTCTTTCTAGTGTCTTATGAG
GGGGCATTGTTTATTGCCCTCAATGGCCTATGATATGTAGAAGTGTAGAC
TGTAAACGCATAAGGTGTTTGGTGATTCATCGTCATTGTATTATTGTAAA
GGATATAAATTTATGATGTGTTTTTCACTCACTCTCTCTCTCTCTCTAAA
TATGACTTGGTAATTCTGCATCTTTGTTTTATATTGTAAAGGATGGTAAT
TCCTCGTTCCATAGTGTATCAGTACGACCACGTTAAAACAGAGTAAAACA
AAAGTGTAAGAAATAGAAGAGGGAAACAGTTTACTCAGACTATTATGTTT
CTCAATGACACTACTTTCAACAATTATTGTTGTGCACAAAGTTTGGATCT
CTTTGATTGATCTCTTGATGCTTTACCATGAACTTTCCTAATCATTTTAT
TAATCTATACCATCTCTACAGGTTCTGGATCGGATATGCCATGACAACAA
ATGGACTTCGCCAACATATTCAGTATCTACATGTGATGGTGAGATAGACA
TAGCTAGTACATGTCTAATTGACACACTTCTCTTAAAATTGCTAATTCTG
GCAGTTGTACTATCTTTATTTCAGTTGTGCATATACAAAGAGTGGTCTTG
AGCTAAATACTGATCCGCAAACTGTTTTTGAAGAATTTATGTTTCAAATA
GGGAAACCTTATCCTAAATATAATTTGCTGGTCTCCGAAAGGCAAATTTT
GCCTCACTGGGAAATAATTTTGCCCTGGGTGGATTGAGTGGGATCATGGG
TGGGTCTCTGGCGGGGATGTCATTTTAGGGGTGGGTGATGACCGATGACA
TTTAGGGGGTGGGTGATGTCATATAGGGGAGGTTTATGTTGGTCACCCTT
TTGTTCTATTTTAATTGTTCCTCTTTGATCATCTACATATACATATACAC
ACACATATATATATATATAGGCTAGTGATCCAATACAAACCAAACATTAA
ATAAAAAATAAAAATCAATATAATTTAGTGATATTCTCAATACAATTTAG
TGATATTTTTTTTAGAATTTAGTGATTTCAGATTGATGATAATCTGCGGA
TCTGTTGGACAGGCCCCAAAAGATCATGATTTGTTGGTGCAATTGATAGT
GATACTTATGCTTATAAACTGAACTAAAGTTTTCACACTCAATGTGGGAC
TGGGATGTTACATTATGAGCTTTGATAGTTGAAACCGCAACTTTCTGGAA
AATAACTTTAGGTTCTGATTCTAAAAGTAGTAATTTACATTGCCAACAGC
CACGAGATGCCAGACCCCTGGTACTAAATGATCATTCCTACCCTCCTTTG
TTAGTCAAACTAGGCTGGAAGTGTCTACCATGATACGCGCCCAAGTGGTG
GACTTATTTCCTTTCCTACTCTCCCTACATTCCTATTATATCTTATATAG
GGTTCCCAGAACATTCATTACATTTGTGGCTCTTTTCCATTCTGATAATT
ATAGTTTTAATTAATTGTGTTGTCGACGGTATATGTTGTAGGTAAAAAGT
CAAAAGCTAATATGAAGCATCTTCACCTATTGTTGAACTTTTCTTTCAGG
TGGCTATACTGCAAGTGTAACTGTGAAAGGGGAGGATTTCGAGTTGTCAG
TAAATGTCAATGATACTGTGCATCCAAGTCCGGGTGCAGCAAAAGACTCG
GCTGCTGTTCAAATGATCGATAAACTACGTCGTTTTGTGGGCCCGAACAA
GTAGTTATATAGAATTATCATGTGTGATATCAGCAGCATCTAACTGTTAA
GTCCAAACATGGATTGTGATATCCATTGTAATATCCCCTTCCAATACTTT
GTTGCCTGTAACTTGTAAGTATTTATTAACAATCACAATCTGTTTTTACA
TGAATGAAAAAAAAAAAGGGAAAAGGAATATTCTCTCTA
Sequence Length:
20389
Sequence Checksum:
23dcc7ba84dc69d2bdbf97c9ed7fc810
View location in JBrowse:
Gene:
LOC108197047
Gene Biotype:
protein_coding
Gbkey:
Gene