Resource Type:
Gene
Organism:
Name:
LOC108199338
Identifier:
LOC108199338
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017367118.1, is a part of gene, LOC108199338. |
| The genetic_marker, MK010975 8_22747221, is located in gene, LOC108199338. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017367118.1 | XM_017367118.1 | mRNA | DCARv2_Chr8:22731010..22747958 |
Sequence:
ATGATTGATGAGTACCAGATCGGTCATAGGGAAGCGCCCCTGTTCATTCA
ATTATACTCAACGTGTCCCTTTATCTCGATACACACATATACTTACACCC
CATTTGTATGTATAGCTTAGCATGATTTTGAACTCGTCCTCTTACTCAAC
ATAAACTTGAAGCTTCAATCTTATACCCATGGATTCTATGCGTGTCTTGC
ATTGCTGCTCCAGTGCAACTTGGAATAATTCGCAGCAAAGGCAGCTCAAA
TTCGTGTCGAATTCGAGTTTTTTAAAGCCTCATACTTGTCGATTTTCCAA
TTTAGGGTTTTTGTATACTACTCTTAGACCTCTCTCTATTTCTTGTTCTT
CTACTGTCACCAGGTATTTCTTTTCAGGGCTTTTTTCAAAAATAATTAAG
CTGCAGAAATAAAAATAAACCTCGTTTGCAACCTGAAAAATCAACTGTAA
ATCAATTGTGTTGCAATTTCGACTGTATTTATTAAAATAAGTTTGAAAAC
ACGGGTATTTATGCAAATTTTCCTTCTTTTTAATACATGAATTATTTGTT
AAATTAATGTAGATATATGTGTTGATATAATAATAAATTATGGTTGATGA
TATGGTTTATTGGTTCTGTTATATTGAGAAGTTTTTATTGCATATTTTTG
TGTGGAGCCTTTTTGAAATGAATTGTGGTGGTATAGTTTATGAGTAAGAG
CTTGTGATGCAGGGAAGTAGAGGATACGAAGACAACGAGCGATATGGTGC
GATTAATTATATTACTAGCACACCAGGTTAAATTTGGGGAGCACATTGCG
ATTCTTGGTTCAGCTAAAGAATTTGGGGCCTGGAAGGAGAAGAAAAACAT
GAACTGGACGAAAGATGGATGGGTTTCTGAGTTTGAGCTTGAAGGGGGTG
AGTCTGTTGAGTTTAAATTTGTGATCGGGAAAGGGGGTGATCACATGGTT
TGGGAAGGGGGTGATAACAGAGTGTTAAAGTTGCCAAAACAAGGGAGTTT
TGAGATGGTATGTCGATGGAACAGGACCAATGAGGCTATGAACCTAGTTC
CCTTGGGTTCAGAACTGGTTGAGGAAGAACAGGGGAATGTACATCACAGG
GTGTCTCCAGACGTGGATAAGGTGACTAGTTCTTTTGTGGACCAATGGCA
AGGGGAAGCTGCATCTTTCATGCGATCAAATGATCACGGAAACAGAGAAA
AAGAAAGAAAGTGGGATACATCGGGGCTTAAAGGGATTGCTTTAAACTTG
GTGAAGGGTGATCAGAATGCCCGAAATTGGTGGCAAAAGGTCTGAGTACT
AACTTTGTAATATTTCTTCCCTCTTACTCCCTTCAGAGTTGTGCTATCAA
CTAGGGCAGGTGAATAGCATGTGTAAATAGCCCCATAGGGCCTCAAAATA
TGAAGGGGCACCCAATTTTCAAGCACATAACATTTATACATATGCAACTA
CTTTATTCTTTTATTGTATGTTAGATTAAAATCCCTAATATATATTTTTT
TCCTTACTCTTTGTTGTATGTTGATAAAAATCCCCAACTTATATTTTTTT
CTTTGCAGTTGGCCGGTTGCAATTAATATTATCATTAGATGTAAATTGAT
ACTATATTCTTGTAATAGTGCTTTATTTTGAATTTAATTATTATTTGTTA
AATTATTTTTTGAGCCTTTTGTATCAATTTGATAGTTATTCTTAGTGGAT
AATTAATATATAATTTTTATTTCTTATCACAAATTATATATTATAAATTT
GTACTTTTTTCCTATGTTATATATATTAATATATTTTAAGTTAATAGTTT
TATACTAAAAAAATTAATAATTTAGTTTTGCACAGGGCCTCCTAGAGCCG
GGCCTGCTATCAACATAATTAGTTATAATATTTCCATATGAATTTTTGCT
TCTGCAAGATGAGCATCTCTACATAGTTTTTTTTGTGCATCATCCTTTCA
TGCTGTTGTGTAATTCTGTAAGCTTCTTTCCATGTTAAATGTGGTTAACT
GGTTATAGAATAAGCTAAATTTCACAGAGTCCATTCAGCTAGCTTTTATT
TATTCATACTTCCTTAAACTGATTAACTGTAGTACATATTGTACATTATA
ATACTATGCCAATTTCATGATTAATGGGACTGCAATATTGGAGACATTGT
TAGAATATACATGCAGGGTTTTATTAGAGAGCGGTGAATTTTATAGGACA
ATGGTCTGCGAGAGACGCTAATTGGGGGGCTTGAGAATCCTCCTGTTGAT
GATAATTGCTACATTGCTGATATGTGATATCTTTTAGAAGTAGACGCGTG
TGTGAAAATTAATTATATATGTAAGGTTTCTTTATGCAAACTAAGGATAG
CCTTACACCATGCCCAGTGGTGGTGCTATATCTATAATACAGCACACAAA
AAAACTTCACTTAATACAATGCTAAACACGGATGCAAATAGCAAAATGTT
ATACTTGGTGCTAAATGTAGAATAAACCAAGTATAGGTGTTGATATAATC
GTCACATAGGCATGCGAGCAGAAAGTTGTGGGAAATGAATAATTAAAGTA
ATGGTGACAAATATAATTGTACATTTGAAGGTTAAGTGGTTGAAATATAT
CTAAACTTAGACCTGTTTGATGTCACTTCAAAACCATGCATTGGCTCACT
AGTTCAATTTTAAGATCAAAAAACACTTTCTGATTTCATCGTATAACAAT
AGCTATATGTATTTTAGCACTACCATTGGACATGCTCTGATATGAGGGGT
GGCATCTGATGCTGGTCTGAGTTTAACTTTGTTAAATAGTTTCACAAGAA
GCCTAATGAAGTTCCAGTTTGACTGGAAAACAGATATTCCGAATAATATA
CACTATTATGTTGTGTTTGGTTGGAAAGATTGGAATGGAATGGAATGAAT
AAAAATTAAAGAATATGTAAGAGACAGGAGGAAAGTTTTGGAAAAACAGT
GAACGAGTGCAAAATTTATATGATGAGACTTGAGAAGAAATTTGGTATAG
GAGAGAATGAAGCATTCTTTCTCAATTGGGTGTGACACTTCTAGTGGGGT
GTAAGGACTGTAATAAGGGAAGGAATCAAATTCTTGAACAATTGTCCATA
ACATAGTTCAAATTTAATTAAACTCCTTCCGAATTCGTTCACCCCAACCA
AACACAATATTATTATTATGACATGTGAGAGGGTTTGTTAGATTATTATT
TGTAAAGGTTGAGATATGATTGTAGTATATTCCAGCTGTTTTGCAAAACA
CCACACTTCGCATTTCTCCGCTCATCCACTTTTGTCATAAGCCCGTCGGT
ACTCGTTACATTCTGCTCTTTAAATCTATTTCTGAAACACTCTCAAGAAA
ATTTAATCAAGAACTCTCTACACTTGAACACTTTTCTTGATTATATACTA
TTGATGGACCTCTTGTGAGTATTAAAGAGTTGGTTTTACCAAAATATCTG
TTGCAGCATTACTGCATTAGCTTATATATGTTAATAATAAATAACGAAGT
GGAGTTATTTTTCTCGTTGAACACAAGAATTGTAGCTTTTCAAATTCCCC
TTAATTCTGAATCTCTTCTACTGCTGCAGCTTGAAGTTGTTCGTGAACTA
CTTGTTGGAAGCCTTGAGGGTGCAAACCGTTTGGAGGCTCTTATATACTC
GGCTATTTATCTGAAGGTTTGTTGGTTCACTACTTGTTTTGCTTTTGAAT
ATTTCTACACATCTTCTAATTATATATTCCATTCACGTAGTGGATAAACA
CAGGACAAATCCCATGCTTTGAAGGTGGAGGTCATCACCGTCCAAACAAG
CATGCTGAGATTTCGAGGTCTATATTCCGTGAATTGGAGAGAATATCCAG
TAAGAAGGACACCTCCTCTCAGGTGATCTGGCATTCATATTATTTATTAC
TTCTATCTTACTCTGAGCACAAAAAGGGTTCACATATGAGTAACTTGTTT
TTCATGATAATATTTTAAGGTTTTTTCTGATGGACAAGGATGGATTTAGA
ATCATATCTTTCTTCGATTCTTCTCCTAAAACGTATTTTCCACTCGTAGT
TCTTTTGTTCCAGTGTAGTATAATTCATCCGTTTATCTAAATCTAAGCCC
TTAATCTTCAACATCATGATTTTCTAAAATTATTTAATATTTTCCTGTTT
TCATGTTTTATAGTTCTCTTGATCTTTGTAGGTGTACCTGATGAACAACA
AACGACACCATTATCCACATTTCAGACTTAGTTCATGATAAAAATATTAT
ATGCAATCATATTATTTTATTTTACCATAAAGTTTAGTTATACGTTTTAA
ATCATATGAACATCCGCCATTGCCAAACATTTAACTTTTTGCTCTCTTTT
TAAATCTTGATTCTTAATAGTTCTGTATGATACTATCTTGCTTCCAAAGG
TAAGCTACTCTTGACTTGCCACTATTGAACTCTTATTATTATTGATCCAT
CAAATGGTAAATTACAGCTGAAAGAAACATTGTTGGCACATGAGACTTAT
GTCATCTATATTGTTGCTTACATTAAATTGTTTGTAACTTACTGTACAAT
TATCAATAATGTGCAGGAAGTACTTGTGATTCGCAAAATACAACCTTGTT
TGCCATCATTTAAGGCAGAATTCACTGCATCGGTTCCTCTAACCCGTATA
AGGGATATCGCCCATCGAAACGATATCCCTCATGACCTCAAGGTTGTAAT
TGTTATAATATGCTAAATTGTTAAATGAACTATATTTTGTAAGTAATGTC
TTACTTAAATTTATACAACACAGCAAGAAATCAAGCATACAATACAGAAC
AAGCTACATCGCAATGCTGGACCTGAAGATTTAGTTGCTACACAAGCCAT
GCTGGAAAGAGTTACCAAAAATCCCGGAGAATATAATGAAGCATTTGTCG
AACAATTCAAGATATTTCATTATGAACTGAAAGATTTTTTCAATGCTGGA
AGGTGTGCTTTCTAGTTTTGTTGTTTATTGTTTCTATTTGTGCTAATTTA
ATCTTTTATTTTTCCACCAGCACATTAATCACAAAATTGTGATGGCTCTT
ACAGCCTTAGTAATACATCTTTTTGCCGTTTCAACATTAATACACCAAGT
TGTTATGTTTATGAAGACGAACAGTGCAGTAAACAAGGTTGGTCCCTCCC
TCCCCAGTACAAAAACAAAAACACAAACAAAACAAAGCCCTGTGACAATT
TATTTTGGAGAAACTGACTTGTTAGGAAACATGGTTTATAGGATTGAAGA
TAAATAGCTATTCTGCTGTAAGAGAGCGGTAGTTCATGCCCTGCTCATTC
TGGCCCCACAAGCATCCAATTCTTTGATTGCTTCAAACGTTTGGCGGGGG
CTTCTAATCTTGGCTCGCCATTTCCTCTGATATGTGTGGAGGGCTGTAAT
CCGTTTGTGAGGACAAGTTGGGTGTTTGACGATTGTCTCTCAAACCTAAA
TATATTGGGAATGTATATAGTTAGCCCTTTCTCATTAGGAGAGGTGAGTA
CATTTCACTCTTTAATAACCAAGCAATGGTAGCGATTTTGGACTGGAATA
CTCTAATCTGCCACTTGTGGTAGATGAAAGGACAGTGATCGGATATTCTT
ATCCGCTGCTGGTGGTGGTAGAAAGGAAGATGGAAGAAAGTTAGGTCAAG
TGCTAATGTTTTTCATCATACAGTCCACATTAGCTTTGTTATTCTAGATT
TCTTTAGTCAATTTAAGTGTATAAATGATACATATTATGGGTTATGTGTC
TTCATGTTATCAGTTGTTTGAGGTTGCTCTCTCGTGCTTATCCTTTGATA
TGGAGCCATGTTTGAGGCTGCTGGATGATTGTTCATATTAAAATCTAGGT
CAAGTTCTTGTCAGAAAATAATATATTAGTTGCAACTACTAGAAATCTGG
ATAGTTATTATTAGCTATTAAAATCTGGACGTAGACATATATATATATAT
ATATATATATATATATATATATATATTATATCAGGATTAATTCCTTATGT
TCAAATACTTCTTTTATCTCGCCTGAATAAACTAAGGTCTTACTTCTACC
TGAGAAGATGTATCATCCTGTATAAATCATGAACTGATGCATCTGTTAAA
TCAGAGTATTTATTTATATTTTCAACATTAACCCAATATTTGTTTCCTAC
ATGCATCAAGCATTGAGTTTCCATCTTTAATCTGCTTGAGTTTTACGTTT
ATATGCAAGTCATCATGTGAATTAGACATTCTAAATTCTTTCCCGCACTT
CAAGTTTGGAGGCGAGACCTGCAATTTGTGAGTTCGTAGTTCTGACATCC
TTATCAGGTTCATACCAACACTGGAGTTTGAGATCCTCACATTTCTGCCA
TCACGAATTCAAAACAAGGCACTGAAATATTCTTCTTCTTAAAATTAACT
TCAATTTAATTGTGAGTCATTAATTATTAAGCAAACGGACAGGTGACAAT
AACTTGGACCTATAAGTTGATTTTAACTTGTAAGTGGCATACATGCCCTT
AATGTGAGAGACAATTAAAGGACTTGTGCTTTTGCAATAGATTGCATATA
CTGGTGTTGCTAGTTTTTCAACAATATAATTAATGTAGTAACCGAATGCA
GAATGATTTGGTTGTTTGCATTCCCTCTCTTAACTTTTTTCTATAATGTT
AATCTAAATACTATTAAATTTCTAAGTTTATATTCACTTTTTGTCTATCT
ATTTTTGCAGCCTAGCAGAACAACTTGAGTCAATAAAGGAATCTTTTGAT
GAAAGAAGTTTATCAACCCTTTCTCTGTTTTTGGAGTGCAAGAAGGTGGT
TGTCTCTTACGTGTTATTATTTTCTGCATGCATTTTTTTTGTGCAAATTT
TGAAAGGAAATGGGTGGAAGGGAGGAAGGCGTAGGAAGGGCTAAAGACCC
CACTTATTTTACGTAAAAACTTGTTAATATATGATTATATGCTAAATTAA
TTACATATTTGGTAAAATAAAGAACTTTTATTTTGTACTTAAAGTTAAGT
AAATTAATTATCCAATCAGTAAATTAAAAAAAGCAAATGCTAAAATTCAT
TGTTTTGTCTGTTTGACTTTACTCATTAATATATTAAATAATTAAAAAGT
TCTGGTTTACCCTGGGGTGCCCTGGATACCCATGTGGCATATCCCCTGTA
TCTGGATCAGGGTATGCAAAGTGATGCAGCAGTGGAAAAAATTGTAATAA
ATTGAAGTTCTATAATTTAATAAATTTTTAAGTTTAATTGTTTAGACTTT
ATACTTATTTAATGTATCAAACCTTGTTTTTTCATAACTTCGGCTAAGAA
AAGTTGTTCGCCTTTTTTCCACTTTAATTTTCCACCATAATGCTGTTTAA
TGTTTTATTTAAGAAGTTCTGACTTCTTGCTCTTGTTTACTTTTTACAAA
ATGTTGCCCCAGTTAAATTTGTATACATCTCTTGATTGAATGTTGTTTAA
GAAGAATATTTGTATTAAAGATTATATAATAATATTCTTGTACCTGATTG
CTAGTGAAAATATCATATAATTTGTTTACATAAATTTTGAATTTTTACAT
ATGCTGTATTCCATTGGACCCCAGGATTACCTTATATTCATTTTTACCAA
TTTTGCGTACCCCCTAGTACATGCCCACAATCTCCACCTGTATCATTGAT
TCTTTAGTTTAAACTATATTACTAATATTATGGGATGAAGTAAACTATAA
ATAGTGCCAGAGTGACATAAGTTATAGATAAACACATAATAAAAGGTATT
GTAAGCTTGTCCTGCTTATTTCATGTATTTTTACATTCGCTTTAGGCACA
CCTTTTTCAGTTGCCTAATGAAGGTATAAGTTTAAACTTGGACTTAAAAG
TTTGGTTGCCACTGATCAAAATCGCCAAATACGCGCCAGGCAGTCACATA
AAGACGAACAAGTTCATCAAGTACAAAAATTACGAAGTACCAATTAGCTG
CATGAATGCATAGTTATCATTAAAAACATATAATATAAGGTATTGTGAGC
AATCATACAAGTTGAAAGTAGTTCATGTCCTACTTTCATTTCATGTGCTT
TTACATTCGCTTTAAGCAAGCCTTTTACAGTTGCCTAGTGAATATATAAG
TTGAAACATGGTGGTTTGGTTGGCAAATCAAAAGGGCCAAATGGGCGCTA
ACTAACTTTGTCACATAAAGATGAACAAGTTCATTCAAGTACAAAAATTA
TTAAGTAATAATTAGCTGTATTGTTGCAAATGTTTTTCTATATGTATTTA
TATATTACAATGAAAAAATTGATCCTTTTATCTTTTATATTTAATTAGCA
TTACTGAAATGAATGATATATAACCCACAGATTAAACATTTTTCTTAATA
ATCTAGCTTATGATATGTTCTTATGGGATTAAATTGTTGACTGCTAGGGT
TTGGATAATTTCGGGGGAAGCACTACGGTGGCAAGTGATGAGATGGAACT
ACTGATGAAAACACTGCAGTCTTTGCAAAGTCTCCGAGGAGCGATTGTGA
GGGGTCTTGAAAGTGGCATCCGAAATGATGCTCCTGATTCTGCAATAGCA
ATGCGGCAAAAGGTGCACTGTTATGTTTTAGTACTGATTTGAATCTAATT
TTTAGTAGACTGAACTTTCATTCCTATTGATGGTTTGACACAGTGGCGCC
TTTGTGAAATTGGACTCGAGGACTATTCATTTGTTCTCTTGAGCAGGTAT
TTTTTATTCTTGACCTTATTTGAGATGCTTTTATGTGGAGATTATGGCAT
AGAACATCCAGTTCTAATTGATATTAACATGCTTTCACTAATAGTATGTA
ATAGAAGCCTCAGTGTCGTATACCTTCAAAGTTGGCATATTATTGCTATT
CGTTTTAGTAATTATATTGTATAAGTTCGTTAAGTTATGGAGTATCTGCA
TATTGCACTTTCTTAAGAAAAGTTCTCTTTTGCTATGTAGAAAATTAAAA
CAGTCCCTACTGAAGTCCTATGATTATGAATTTTTCTGTTTATCTGACTG
ATTTGCACAATTCTCAAAGTAAGATATATATTAGTATTTCATAAGTCTGT
ATATATTAGTATTACATTTACTCAAAGCGTTACTCTGTCTAGTTAGAGGA
AATGTAATTTGATAGAAATGGGGTTGGATTTTCACTCTCTATGGGTATAT
GAATTTATTCATTTTTAACTTATCTATAAAAGTTAATAATGAATGTTAAT
ATTTCTCTTTCCTTCCATTTCACTAAAACAGATTTGAGCTGGAGCACATA
CCACCATCCTCCAATTTGGGGATAAATGCTCATTCCTACTTCCTGCTCAT
TTTCTTCACAAAACTCATCATATAAAAACTGCATCCTTTAGTTACACTCT
TTTCTATTACATTATTTCTTTCACATTCAGTTCTGTTCCCAAATTACGCT
TTCCACTCACCACAATTTGCGCAAGCATTTTACTACATGTGTCTAAGTAT
GTGATTAAAATAGATCTCACATATTTAAATCATACCAATACTCCCCTCAT
TCAGTTATACCTGTCCCTATGACTTCTTTTGCTTAATTATATAAAATCAT
ATAATTGCACACTATATTTTTTATCGTATCTGTCTTGAAATAAAGTTTGA
TCATTTTTAATAAAAGATCAGAAAAAATTTGTTATGTGGAAGTACTTTTA
TAAACATTTTGTAGTGCACTTGGAAACTGACAGGGACAAGTAAAAGTAAA
AGGAGAAAATATATACCTGTATTGGGTTGGATTGTATATTGTTAGACGCC
CACTATGATCGTATCTTGATTTGCAGATCGTTAAACGTTAGTTGCTAGTA
TAGCTAGTGTATAGACAAGGTTTCATCATAATATAAGGGTCAATCAGAAA
ATCATGGGCCTGCTTCTGCTTGAATTCAAATCTATTCTCTGGTACGATAT
CCTAATGCCCCTTCAGATCCAAAACTATCACATTATCTTGGTTTTTTTTT
CCCTATAATTGAGTTCACATTTGACATACATTTCTCTGCTTAAAGTATAA
AAATTTAATTTCCCTATATACCATTACAGTTTGTAAGGATATCAAGGATT
ATTATGATACTGATGTTGCAAATGATTTATTATATCAACTATACGTTTGG
TAAGTATGAATTTTCCCAAATACCTGCCCTAGTAGAATACAAGAGTAAAT
ACATATTTTGAAAGACTGGGATAGCATGCGCGCTAAGTTGGTCTTGAAGT
ACCATGCAAAGAAAATAACTCTGCTAAGAGATACTTGCCTAGTAAATACA
TATTTTGAATGACTAGGATAGTATGCGTGCTAAGTTTGTCATGAAGTACC
TTGCAAAGAAAATAACTCTGTTAAGAGTTAATAACCCTGGTCAGGGGATT
CTTTGCTTGTACATACTTTATATTAGTTCTATATAATGTCTATCATTGTA
AGATTCTTATAGCAGTGATGATAAAATACAAGGCCAGTAATGTATAAATA
TGTATAGGTGCCTTAATACTCTCGAAGCTGCTGGAGGTGCTCATCAACTT
GCAGAACATGTGGACTTGAAAAATATTAGATCTTGGAATGATCCTATAAA
GGCTCTCGTGGTTGGCATTCATCAACTGGGTCTATCTGGTTGGAAGAGAG
AGGAATGCAATGCTATTGGAAATGAACTTATAGCATGGCAAGAGAAAGGC
CTTCTGGAAACAGAAGGTATATCTGTATAACTAACAGTTGTTTTACTTGG
ATTAGTAATGCCTCTCTAGTCTCAACTTCTGTGTCATATATTTTATGTAG
GCAGTGAAGATGGTAAAAAAATTTGGGCATTAAGGCTCAAAGCAACTCTT
GATAGATCGAGAAGGCTGACAGAAGAGTACTCCGAGGCACTTCTTCAGAT
ATTTCCAGAGAAAGTTCAGGTATAATAATTACATATTTACCGGTCTAAAG
TCATCCCTTTTTATAAGTTGTTCGTTGGTATTCAAAAAGTAAATTTAAAG
ATGTTTCTGTAATGAAATCCCCTATCTTTGGCCATCATCTACTTTCTAGA
GTAAACTGCCTTTCAAGTCAATGTTATCGAGTAGGTACCCTAGTTGTTTC
ATATGTTGTTATTATGCTATATAATTTGTAACACTTTGCAATATCCAGTC
CTGTGGAACCTGTGTTTATATACCCATAACATTTGCAAAGTTCAGTGGGG
TTACTGACATTCACAAGCTTCATCTTCACTAATAGGAGCCATAACCCTCT
GCTACTTTGTCACTTGTCCTATACATCTTCATGGATAACTTAAGCTTCTA
ATCGAGGATATTTTTGTCCTTGGCAGATATTAGGAAAAGCTCTAGGAATA
CCAGAAAATAGTGTCCGCACTTATGCTGAAGCAGAGATTCGTGCAGGGTA
TGGTGACATTATATTTGATATCATCCATTTTAAAATTTGTGATTTATGAT
TATGTATTGGTTTCCACTACTTATGAATTACCATAAACATCTAACTTTTG
AGTGTCACTTTTAGTGTTATTTTTCAGGTTTCAAAACTTTGTACAATTCT
CCTAAAAGCTGTAAGAACTGCCCTCGGATCTCAAGGTTGGGATGTTCTTG
TTCCAGGAGCCGCTTCTGGAACCCTAATACAGGTACTTTATTACAACAGC
TTTCACCAGTTATCTTAATTCACTTAAATATCTTTGCTTAATGATAAAAT
AGAATTATATTTTCTCCAGTTTCAAAAATATGAACCATGGATACTCGGAA
GAAGATACCTATTAGAAGTTTATCATAATGTGAAGTTACCAATTCTCCTA
AAACCTTGAGGTGTTAGAGTAAGGCCCAACAGGTCTTATATTATATAACA
GTCTCCCTCAAACGTATATGCGATTGAACAGGAAGACAAACAGAACCAAA
CTGGATATACAAACTGATAATTAAATTAAATAAATCAGGGTGGAGGGAAT
CGAACCAGAGACCCCACCTGAATAGAGCTCTTATACCATGTAAGTTACCC
AATCTCCTGAAACCCGAAGGTTTTTGAATGGACTGGTTACTTTACACATA
GTAACTGAGCCTCTCCAATGGAGAAGACCCCTTGACTAAAATTTTATTTG
GTATGCCACAAGTAAAAATCATAGAAATTATGTAAAAAGTTACGCACTCC
AACGGGGCATTGCCTTGGCTAAAATTTTAGCCAACCGCCTGATGTTAGCT
GTATTTGCTAAACCTGTAGAGACCTGTAGTAAGATTCCACATCATTTATT
TCCATATCAGCACAGCGCCTTACAGGTTCAACAATTGTTACATAATCAGT
ATTTTATATCATGTAGCCAATGCTGTTGTTAGAGAAGGCCCCAACAGGTC
TTATATTATTCAACACATATTAAGCTAGTTTTACTGATGACATATTTTAT
ACTAACTGGAGTCCGTGCAGGAACGAGAGCATCACTCATGTAGTCATATG
ATCCATTTGCACAACTTTATTACATTAATATATTAACTATATAATGCATT
CGCTAATGTTCATCTATGCTGATATATATGTTCACTTATCCACTTGTGAT
TCATGCTGCACATTTGATACAGTAGTTCCTATAGGTGTTTAGTTATATAC
TTGTGGATGTCTATCATGCATGTCACATATGTTAAATGTTGTGGTTTACA
TCTATACTGTCGTCTATCTTCCCTCAAATTTCGGCTGGAAGGGATTTGTT
TTATTAATGACTTGCATGTGATTGGTTCTCGATTTTCAGTGCTTCGTTTT
GGTAATTCATGTGGAACTCTTCCAATCAACATGATTAATTTACTCTACCT
TTCAGCATTTTCACCTTTGCATCTGATATAAAAATACAGTAATAGTTCTG
CTCTCTATTACATCTTTGAGTCTCACTTCCTCAGTTCTGTAGGTTGACAA
AATTGTTCCTGGGACACTGCCAGCATCTGCAACAGGACCTGTGATTCTTG
TGGTTAGCAAGGCAGATGGAGATGAAGAGGTTAGGAAATTTTCTGTATTT
GGATTTTAAGCTATCTATTATAGTCCCTGAGAGCTAATAAGTAGCCATTT
TTCTTGCTAATGCAATCTGGCAGGTAACAGCTGCTGGAAGTAATATAGTT
GGAGTTGTGCTTCTGCAGGAGCTGCCCCACTTATCCCATCTTGGTGTCAG
AGCGCGGCAAGCAAGTCACATTCACAAATCGTTCCTTGTTCCCATTTTAT
TTGAGCCACTTCTTTTCTTTCCTTTTTTATATCATGCATTTCCATGCAAA
TGAGAAACTTATAGTTTTATCTGTTTTGTATAAAAAATTGAAGTTGAAAT
TTTAATACAAATATATATAATTTACAAAAAAATGAACCGGCTCAAATAGG
AAAAAGAAGTGGCTCACATAGACATGAATTGGGACGCAGGGACTAACTTA
CAGTTTTATATGAATTAGATCATGAAAATAAATAATCACAGGTTTTAATC
TGCAGGAGAAAGTTGTTTTTGTGACTTGCGAAGATGATGATAAGGTTAAT
GATATCAGAAAACTTGACCAAACATACGTGAGGTTGTCATTTTCCATCTT
TCTATCACATAGTTAGCTTTCCCTCAGAAGCCATCGTAGTAATTTATGAT
AGCATAATCTAATCCCTCTTTGATCCAAAACCACTATTTTCTTCCTTTTC
ATACTTCATTTGCCTTTGTGATCATTTTTGTTTTATTATTTCTTTTCCAG
GTTAGAAGCATCATCATCAGGAGTTAACTTAACTCCATCAACGCGTGAAC
TCGATATTTCTTTAGACAATCTTTCAAGCAATGGTTCATCAACAGCTGCA
AAAACAGCTGATAGTGATCCCTCCTGGTTAGCCGCAGAAACTTCTACAAT
TCAGGTACCAACCTATTTTCATTGAGTGTTTGAATATCATGCTCCTGACC
TGTAGTTCAATCTTCTCTTGGTTCTCATTTTGGTAAAAAACGCATCGTTG
TTTAGGTTGACTCTACTGAAGACGTCATACCACTTGCTGATGCAAATGTC
CAATCTTCAGGTGCAAAGGCTGCTTCTTGTGGCCGGTTAGCTTCTCTTGC
TGCTATTTCAAGTAAAGGTAGTGCACTTGTGCCAAAGGCCATAACTTTTG
TTATGAAAATTTGTTCATATTGTAAAAGTAGAAGAGCTTTGGAAACTTAG
TCATACTGTGTTACTAGCTCACTTTTATTTCTGCTGTGTGAAATATCATG
TGTACCTCCCTACTATATAATATGTCTGGGAAACCTATCAAATTTCTCTA
AATTTATCACATGGAATCATAACTGCAATATCTATCTTCAACATATTTCT
CTCATTAAAACCACATAAACTATTAAGATATACAAGCAATTACTCCAACT
TTTCTTCAAAAACATTACAGATGTTTTGCAACCCTGTTCTGTAAAACCTT
AAATACATTTTGGGGAGCGTTGTTTAGATCTGCACGTTTCAGAGTTGCCT
CCTATTCACTGCTTGGTGGCATGCTAGTTCTGGATTTCGTGCACATTTTG
ATTTGTTATCTAATTAATTTTAAGGAATCATATAAATCAAAGAAGACTTG
AAAGATGAATGCAACCACTTCTGTTAAAGATTTGAATGGTGTTTGATATA
GGACAACATTAAAGTAGCATGGTATAATTGGTAAATGTCTAATAAAACAA
TCAACAACAAGAGACGATTATAAACTGTCCCATAGGATGGGTTTACAGAG
TGTTTAACGCTAAATTAGAACTTGATATTATTCTGGTGAAGGTAAATACT
TGTGTAGTAATATAAGAACTTCCTAAATTAATTCTCAGTGAATTATAACA
ATCTCTAGCTTAATGAATCCTAAACCCCAGCATTACCTCAAATAAAAGAT
ACATACTGTGGAAGTGTTCACACTAAAGGTAATATATATAGATACCCTCT
CGCACCACTGTTGCTAGCTTTGTAATGCTGCATATCACTAACTGCTGGTC
TTGTGATTGGCCCTTTTCTTCTTGGTCATTAGCTGCTAGTAGATATTACA
GCTTGTACCGGATTTCTCCAGTCCCTGCTATTTATATCTGAGTATGTGCT
TGGTGATAATTAGACCATATTATTAAAATCTTAATTATAATGGTTTTTCA
TGAAAAATGGAAGGGGGAAAGAAATAAATGAGACTTTTTCTAATATATCT
GGATATTATTGTTTTAATCCTGAACATATGATGTGAAAAAGTGGTTAAAA
GTTAAACATAATATTTGAAAGACATGGAAGATAAATCCTATAGGAAATCA
GCCCAAAATACTACACTGTTGCGTGTGGGAAATGGGCAACCCTGTGCTTA
ATAAGTAGCATTTTTTCTGCTGTATGCAGCGCATTATAAGAAATATATTT
TCTCCTGCATGCATGTTGTGAGAGACATCATAAAAATTTCAGTGTTTGCC
CTATTGGGAGATTGACTTTTCATTAGATGCGTACTCCAATTGCGTGACCA
ATATACGAAGGGTCAGACATACAGTTGTGGTATATTAGACAAATTATTAT
AGTTTTATAGTATCATGGGGATAACCTAATCATGTTTCCCAATATATAAG
GAAAATGTAAATAATTTTTTTTTTTTGTCTCATTGGAATAGTGATGTTCT
CATACACCTTCGTATTTGCAGATGATAATGTATCTGATTGCCCCAAAACC
TACTTACAAATCATTCATGTCTTTATGTTTTTTTTACCAACTTGGAATTC
AATAACACCTATAGTGGTTACATGTGATGTCCTAGATACACTGTCTCTTT
GTTGCCCTTTAGTTAACTTTTTCGTTTTCCTTAATCTGGTAGTATTCAAT
ACTTTAAAGAATCTGTACATGTTAACTTTGAAATTGAGAAAGTAATATAT
TGTAATCGTTTTTCTTAATCTGGTAGTATTCATTATATGGCAGTTTACAA
TGAACAAGGAGTTCCGGCTCTGTTCAAAGTTCCCGCTGGAGCAGTAATAC
CTTTTGGCTCTATGGAGTTGGCGCTGAAGCAAAACAACTTAATGGAAGTG
TTCAGCTCACTTATTGGGCAGATAGAGTCGGCCAAAATGGAAGATGGTGA
ACTTGACAGACTCTGCAATGAACTCCAGGATCTTATATCTTCTGTACATC
CTTCAAAAGACATAGTTGAAATCTTAAAAACAATTTTTCCTGGTAACACA
CGATTAATTGTGCGCTCAAGTGCAAATGTTGAGGACTTGGCAGGAATGTC
AGCAGCTGGGCTCTATGACTCGATTCCAAATGTCAACCTTTCAAGTCCAA
TAATTTTTGGGGATGCTGTTAGCCGAGTTTGGGCTTCATTATACACCCGT
AGAGCTGTTCTAAGTCGTAGAGCTGCTGGGGTGCCTCAGAAGGAGGCTAT
GATGTCTATTCTGGTCCAGGAGATGCTGTCGCCTGAACTATCATTTGTAC
TCCACACACTCAGCCCAACAGATCAAGACCACCACTCTGTTGAGGCAGAA
ATTGCTTCAGGTCTTGGTGAAACTCTTGCGTCAGGAACTCGTGGCACACC
CTGGCGTCTATCTTCAGGCAAATTTGATGGATCAGTACGCACATTAGCAT
TTGCAAATTTCAGTGAGGAGATGGTTCTTGGTGATGGTCCTGCTAATGGG
GAAGTCGTCCGTGTAACTGTTGACTATAGCAAAAAGCCCTTGACAGTGGA
CCCAATCTTCCGTCAACAACTTGGTCAGCGTCTTGGTTCTGTAGGTTTCT
TCCTGGAGCGCAAGTTCGGCTGCCCACAAGATGTTGAAGGATGTATGGTC
GGCAAAGACATTTATATTGTGCAGACTCGTCCCCAACCACACTGAGGAAC
ATGGTTTCCAAAGCAAGAGCCTGCACCTGTAAAACATGTAAAACTAGTAT
ACATATGACTTCAGTTCTCCCAAGAGGTAAACTTTGGTCCATAATCAGAA
TAAAATTATGTACAAGTTACTGTACATATACCCTGAATACGTAAAATAAA
TATATCTTAACTCATATACTTGAGTTCTTTTACAAAAATTACAAGATA
Sequence Length:
16948
Sequence Checksum:
3e2dcc87ddf2dc28c8420bfebce17204
View location in JBrowse:
Gene:
LOC108199338
Gene Biotype:
protein_coding
Gbkey:
Gene