Resource Type:
Gene
Organism:
Name:
LOC108199558
Identifier:
LOC108199558
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017367431.1, is a part of gene, LOC108199558. |
| The genetic_marker, MK004824 K2268, is located in gene, LOC108199558. |
| The genetic_marker, MK018909 8_23890668, is located in gene, LOC108199558. |
| The genetic_marker, MK018902 8_23890716, is located in gene, LOC108199558. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017367431.1 | XM_017367431.1 | mRNA | DCARv2_Chr8:23888224..23906737 |
Sequence:
TTCACGCCACATATGTGTCAGACATAAGTAAACTTGTGAAGGGAGAGAAA
CGGCTCATGTCTAGTCTGAGACAAGTACACAAAGCCCTTCTTCTTCATCT
TGTTTGTGGCGGGAAGTATCCATTACTGAGCTTCCGTAAGGCCAGTATAA
ACCCTAATTTCTCTGCACTGAGAAGTATTATTTAACAACAAGACCTTCCG
TTTATATTCACAACATATATACTTTCACACGCACCAATGTACTGGGCCAC
CGCCAAATCCGTCGTCGTTTCAGCCCCTCGTTTGCGCTCTCTTGCTCTTC
TACTTCGTCCCCCTCTTCACAGTCGCCCTTTCGCCTCCTCTCCCTATAAG
TAATCTCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACCCATGGAA
AAATTGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CCTCCCTCCCCCCCTCTCTCCCTCCCCCCTCTCCCTCCCTTCCCTCTCCC
TCTCTCTCGCTATATATGTGTAGTTTCTTTTCTAGGCTTGTTATTTTATT
TTTATGTCTTTTGTTTAAATATTTGAATGCATCCTTAATTTTTTTTTAAT
TTGGTGTTCCTGTTCTATACTACAATGTAAAAGTTTTCCTGGAGAAAATG
AATGTACTGCTGACAAGGCATTAATTGCTATACCACTATGAGTTTATGAC
CACTCTACATCCAGTAATAATCCCCGAAAAGTGATATACATTCTTTAACA
TGTACCAAACACAAATTTGATTTATGTAATAAGTTGTAATTGCTGTCTCA
GCTACGGCATTACGGGAAAATGGATTATTTACGAAGTGATGAAAGGAATT
GGAGGTTCCGCGGAGGCGCATATAGCAATCTAATAACTCCAAAACCCATT
CAATATGAGTATATGACCATGTATCGGATATAAGCTCATGGATTTGAATT
ACATTCCTTTAAGATGAGAGACCTTTGATGATTATCCTGACCTTGTCCTT
GATCCCTAGCAGTTGTTCCTTAGTGTGCGGTACACTCGACCGTATCAACC
AGAGAGAAAATCAATAAGGTGGCTGCTACTACTAGGTTTTTAATGTTCAC
TCGGGAAAATCTAGTTCTAGCAATTAGCTGATGTGAATCTTACAATTTTT
TCCCGCATGAACTAGATTTTTCCGGATGAACATTAAAAACCTAGTAGCAG
CAGCAGCCACCTTATTGATGTGAATCTTACAATTTTTTCATAACATCTCA
ATTAAGATGTAAAAATATAAAGTTAGTCAAATATAAATATGTTACTAATT
ATATTTTGAACTTCATGCTACTGGGTTTTACCCCCACTGTCATGTGCTAG
CTGCCTAGCTCCACTTTTGTCTCTTATGATTAACCATAATTTTCAATTCA
TCTGTAAATTGATTTATTATTTTTGTAAAAAAGTAGGGACCAGGGGTAAG
TGAATTTGATATCGAGAATATTAAGACATGACGTACATCTTGGAGATAAA
TGTAAAAGATGATGAATGTTTCATTACATATTCCTTTTATTTGCTGCAAA
TTTGTTGCTCTTAGGTCTTCACTTTGCACAATTAAGGTAGGAAGAGTTGG
TTGCTCCTTCAATTTTTCTAACTTAATTGTTGCAAAATTTTGGATATCAT
TGTTGTCAATCAGTTCTTACTAATTATATTCCTCTATTCTTTGAACTATA
CTTAAAGCATCGAGCAGTGCAATCAGATTCGTTCCTTGAAAGAGAAGAAG
CGCTTGAGGGGAAATATTAAAGCTCTAAGAAACCACAAAGAATTAGAAGG
TTCCCTAGATGAGAAAGATTATTCTAACATTTTGTGGTGGAAGGAGGTAC
CCTGTGCAAGATTTTGTTGCTTAAAGTGGCGCATCACAAGCAAATTCTTT
TTCAGTAAATATTGAAATATCTTTTATTTGATTAATAAGTGTTTCTAAAT
CTGATGTTTTTTAATCAGAGGATGCAGATGTGCAGGAAGTCTTCTACTGT
TCAACTGATCAGTAGGCTTACATATTCCAACTTGTTGGGTTTAGATGTCA
ACCTGAGGAATGGAAGGTGACATTTTGGAGCTCAATAGGAATTTCATAAA
TTACTTTGTTTCTGTTTTTCTTTACAATATAACTTACACCTATTCTACTG
AAAAATATTGTTTCCTAAACTTCTTAAAAGATAGGACATGGGAAAATGCA
GGAAGATAAAATGTTTTCTTTGCATCTGATTACGGAATGTATGAAAACAC
TATGTTTACAATGGAGCAATCAGTTCTGGGTCATAGAGACAAAACATGGC
AGGAGTACTGTTAGTTATGTATATATGTTAACTGCTACTTATTATAAATA
AAAGTAGGAACTCTACGTTGATGTCACAATTACCTGATACACTTATGTCA
TGCGCTTCTTAACACTGATAACATCTTTGTATATATATTGTTGTTACAAG
GTAATAGATAAATTTTCAAAACCCAATCAAATTTAGAAATGACTTTTGCA
CTTGGTAAGATATGTAAAGATTTCTTGATGTCATGTACACTTGAGGAGCT
AACCCTATAATGCATCGCATTTTGAACCACAAGCAGGACATTAGCAAGGT
TTAGTTTTCTCTTTCATCTTAATGAAGTAGATTTCTATTCATTACATTTT
TTATGCAAAAAGGTTTACGATATTTTGAATTTTGCCAACATGTTTTGTTA
CTATAGTAGGTGAACAATGGCACACGACTAAAAATGGTCTCAAATATTTA
TTTAAGATCTTGGCTAGACAATATTGTATATCAAGAAAATCGTCGTATCT
ATAGTTGTAGACATGCGTTTTGTTATGCACAACATGACTTGTTCTCTAAA
ATTTTGTCTGATCTTTAGGCTTAATATTCAGGTTGTGTTTACTTTGGCAA
CGTTGACCGTTGCTCAGCTTTCACAATGTCTTGATAATATAATGTCAGCC
CTATTGAAACTCCAGAAGTCAGAAGATGATCTATACAACAACTTTTGCTC
ACCATGTTTATCTCGAGATATAGCTATCACCCCACAGTGTTAACTTTAAT
TCTACATTGTCTTTTTCTGAAACAAACCATTCTGATTTTTGATAATCATA
AATAGAAGTATTAAAGTCACTGATAACTTCTCATTTTCATATATCACAGA
GTCATCGTTAAATGCTGAAATACTAAAATAAGGGGCCATGACTTTACATA
TTTTTGTGCATGTTTTATTTATTAAACTCTGTACAAGAACTATTCTCCTC
TTTTTGATTATACATTCTAGACAAGAATCATAATAAATAATATTTCAATA
ACTTATGTAGTCTTAAAGAAGGATCAATCAACTGGGAAATGTTGCAATTC
AAGTCTAGATTTCCACGTGAAATTTTGCTATGCAGGGTATGCTATACTTG
TGATTTATATATAATTCACATCACAGTCCCTTTCTCTAATTTTTCTTCTT
TAAGTTGTATTAAATTATGCTTTTTCAAGCATCAATGTATTTTGTCTATC
TAGGTGGGTGACTTTTATGAAGCCATTGGCATTGATGCTTGTGTTCTTGT
GGAATATGCGGGTTTAAATCCATTTGGTGGTTTGCGTTCAGATAGTATCC
CAAAAGCTGGCTGCCCTGTCATGGTACAGTTTCCATTCAAGTATTCTGTA
GAATACTGTGAGAACAATGGTTTTGTATTGGTAGCATTAGTTTAAATTCT
AATCTTACATCATCATCATCGATTTTTTTTCAATGAGTTTTCCTTGAGTT
TTGGTGTTGACCTATTTCCTTTAATCACATTTTTTTTTTGCAGAATCTGC
GTCAGACATTGGATGACCTGACCCGGAATGGTTATTCAGTTGTGAGTACA
TTAAATTTTAAGGATGTTAATATTATTTGTCATTAATATTTATATTTGAT
ACACGTTATATAGGCTTGCATGGTTTTTGATGTGTGTATTTATATGCAAT
TGGAAATGTTTGAATCCCAATTTTCTTGGTGTTCAATCATAAAAGTGTTA
GAAAGATGTACACTCTACTAGAATAAGATAACACTGAAGAGGGGAGGTAT
TAGCTCCTATGTACGGCAAATGAAAACAAAAGAAAAAAAACCTTATAAGT
GATTAAGCTATAAAAGGCTAAGAAAGATGGAATAATAAACTATCATATTC
TTAGTTATAATTGTAGCTTTGTTCACCACCACCACCACCAGGACCACATG
ATTATATCTGTATATCCATATTGTTGGTAAGTCATAAAAGATAATATTTC
CCAACAATAGACATTATCTGAATTAACAAATGGTATACATGTAAGAAAGA
AAAGCCACATATGGCGAAACAATACATTATCTAATTAAGTGTTACATACC
ACAACACAAGATTTAATAAATCTGAGGACCGACTTGTATTCTAACAATAG
CCAGTAACAGTTCTATTCCCTACTAACCGTTTCTTAACCTTGCCATGCTT
CAAAATGGTAGAAGGCCCCAGCCACTCAGCTACTCTTGCAGCCAAAGACC
AAGCTTTCCTCTTCTTCAACCACTAACTGAAACAAATATTTTTCACAAGG
TTCTTCATCACTTTTAATCAAACACGAAGTCACGAACAATCATGTAACTC
TTTTTAACTCTAACATTATCTATTCCAATATTCTATAATCAGTCGGTTAA
TATAATTTAATCAAATTTCAATTCATTAATCAAAATTCAATTCATTATTA
TAAAATTCCCATTGTCATAGAATTTCCAATGCAAAAAACTATGGCATTAT
ACCCTTCGGTACATCTTGGCCGTGCCATTTTACATCAGGCTCTTTATAAG
TTTTTATTAATATTACCTATTTTAAAATGAAAAAAATAAAGATATTTATA
GCAATATTTATGTTACTAATAATTTTAATTCTTCTAGATATATGTTCCTT
TTATTTTTGGATTTCAACTTCATGTTTAGACAAGTAATTAATTCTCTTAT
GTATTAGTTTTGCTATGATGATCTGATAACACAATTATTTAATAATTATC
TAATTATGTATGATATTATGCCGTCTTAGCTGTATCCAAAGTTTAAGTAG
TTTTAAACATGTTGATTTGGGTAGTTAAATATGTGTTGTGTCCACCAATC
CGTACTAATTCTCAGAGCAACCTAGGGTACAAGTCAATGATGTGGAGATC
AGACAAGTGGAACTTAATGATTATCAATCTTTTCTTGTGAATGTTAAGGA
GGCTTTGTACAGTCCCCACTGACTCCGTAATTTAAAATGCTTTATTTAAG
GGATACCTACCATTGGCTTTCATAGTTTCATTGTATTATTGTTAGGATTC
GTGTTTGAGCCTTTAAGATTTTCCTTTACATTAAAACTGGAGGTGGATTT
AATGTCAATAAAGGAAAATGATGCTAAGTTAAAACATTGAAGTTACTTGT
TTAATATATCATATTTTTACTTAAATATAAGTATATTTATATTATAATTT
TCCAAAAAAGTATTTCTATTATATATCATGAATATTGTGAAATTTGGACG
ATAGGTACTATTTAGTATTTAGTTACTAGGAATCTAGACAATAAGCAGGA
GGACTTTCTTATCATCCAAGACACAATTTCAACTATGCAAGGAGATGCTA
TCATCCTAAATTAATTACATTTTGATTATTATTATTATTTTATTTTATTT
TAAATTTGTGTTCCTACAGATCCCTTGTAGAGGTAGGTTCTATCACCTGT
TGTCACCCTTTCCTAAACTTGTCCGACATCACTGACATTACTATCAATTC
CTCTCTTATTGAGGTTATTAGATACAAAACATGAGGCAAAGACATGTGAA
AAACAGTAATGATTAAGGAAGGTAATGCATGTTATTTTGCATATATTATT
GAAATGAGCATGTCTACACTTGCTGATTAATAGATAAAATAGTGATTTTA
GGCAGTCCTTTTGCTTGGTAGGGATCTTATCAATCATGACTGATTTGTAT
CCATCTTTATTTATACAAATAATAAGTGACAATGTTAAGAGTTTTAACAT
GTCTGTCTAACACAGTGCATAGTAGAAGAAGTGCAGGGTCCGACTCAAGC
TCGTGCTAGAAAAAGGCGTTTTATATCTGGGTATTACATGCTAATTACAT
TTTGTTAAATTTAAGTGTCTTGCAGTGTTTTTTTTTATCTAACAGCTATA
GTTTATTATGCTTAGTAATTATACATATCTTCCACTTACATATTTCTTAA
CACACACAGCCATGCACATCCTGGTAATCCATATGTTTTCGGACTTGTTG
AAGATGATCGTGATCTTGATTTCCCAGAACCAATGCCAGTAGTTGGTATG
TGCTAAATATATCACTATGTATATCTATGTAAGAGGTTTTAATCATTGGT
AAATTATTTCCGAGCTTACTTTTCAATACTTGTTTTATCACTTTTATCTT
TGCATAATGCTTAAGTTGTTTATTGTGCTGATTGTCTCTACTTAGGAGTG
TCCCGCTCTGCAAAGGGGTATTGCCTAATCTCAGTACTAGAGACCATGAA
GACATACTCTGCGGAGGATGGTCTAACTGAAGAAGCTGTAGTTACCAAAC
TTCGGACTTGTCAGTATCATCATTTGTTTCTGCACAGATCGCTGAAACAC
AATTCTTCAGGTTTATGAGATTCTAGATCTACTGGGTCTTGGCGTTTTTA
CCATACTACATTAATACCATAACTAGGATGTTGGTGGGTGACCAAATAGT
TATTCCAGACTAAATTGTTTTATGTTGTTATTGCAGATTGTTACATCCAA
TATGATATATACTGAGTTTCATTGTACTTTGCTGCAAGTCTTATGCTATA
TGCTAAAAAGTCACGTTTGAAGAGTCATAATAATTATTGACATTAGTTAC
ATATATTTTTGAAGTGCAAGGGGGAGGGAGAGTCGAGGATTCAAAACCAT
GACTTTGTCATGGGGGAGCAATTGGGAATTAGAATTTGTCGATGGGCTAG
CCATGAATCCCGGTTGTAGTCAAATTTTAATATCAGTTTTTTCAGATAGA
TCTTTATAACGTAAGGAAATTGGAAGATGGCGTATAAAGTTTGTTTAAGA
AAAAAGCAGGACATAGTAGAATTATTCCACAGCATAGTTCTTTTCACTAT
TGGTCTGGTCACTTCAACTTTTTGTTTCTGGATTTCACTCGAAGGAAAGG
TGGGGAAGGAAAAGAAGTAAGGGTGCTTTCTTTTTGAGTTAAGTTTCCTC
ATCTTTTGTTGGAAAAAATGGTGAAGTGTAATGGAACCTCCGCAAATATG
TGTGAATGAATTTTTGTTCAACATGTGAGAAGAGTAAGAGAGAAAAGACA
GCCAAAAGGTGTTTCATTTCTTTTTCTTTCCTAAAATGGGGAAAATAGTT
GGTCTTCTCTTCCTAGACTAATGCAGATGCTCACTAGAGTGTTGATCATT
TAAGTTGAAGATCAATTAGTGTTTTCATTAATTTTGAGCTGCCAAGTTTA
AATGGGCTTATCTGGTGGCTCATTTCATTTAAATCTTACTTCGACTGAAA
TACTAATTAATTTTATCTTGAGTTCATTTATTTGCTATATGAGCTTTAGC
TGACGTAAAAATCCCTTAAAACATTTATTTTGTATCTTCTTTACCTTTTA
TGCCTATTTTTTTCCTTTTCTAATCTATAAATCACTTGCAATGTATCTTG
TGTCATTCTTTAGGATTATCATGGGCAGAACTAAAAGGTTTTCAGTGTGG
GAGCTAAGATTTAATTAAAAAATTAAGCTAATATGTCTCTAATCTTCATA
AATTCTATTAAGTACTTTTATGTAACTTTTTTTGTAGCAAGGGCTATAGT
CCCTCCTAGCTCCTATGTAGCTCCACCACTTAATGTTTTCAAGATATTCC
TTGCAAGAAGGTTTTTTTAAAATCATTAGAGATTTTTTCAGGTACTAGTC
GGTGGGGAGAATTTGGAGAAGGTGGGTTATTGTGGGGAGAATGTAATGCG
AGAAGTTTTGAATGGTTTGAAGGCGACCCAGTGAATGAACTGATCATTAA
GGTTCATCTTTGATTTTGTCTCTTTACTGTACATCTGTATAGTAATTATT
ACTTTTTTTGTGTGTGTGCTTTACCTACTGTCAGAACTTTTACGATCACA
GTTGGTTGTAAAAATTTAGGTAAAGGAGCTCTATGGTCTTGACATTGAAG
TCACGTTCAGAAACGTTACTGTTGCTTCAGTAAATCGGCCTCGTTCACTA
CACTTAGGAACAGCCACACAAATTGGTCAGTATATGTTCTTTGGCTTTCG
TATGCTTTGATTTCTGAATTCACTTTAGTAAGTTGCTGCTTCATTATGAG
CAGAAAAACCGTGTTTCCTATGGTTTGTGTTTCAGGTGCTATATCAACAG
AAGGCATACCAAGTTTAATAAAGGTTCTACTCCCATCAGATTGCATCGGT
CTACCAGTTTCGTGAGTGAGAAGTTCCCTGAATTGTTTGTTCACAAGTAT
TTCCACATTACACCTAATACAAGCAGCTCGAAATTTCGTATCTATATTAT
AGATTTTTACTTCCCATTGCGCTGTGTTCATGGTTGATCAGCCAGGCCAA
TAGGGAGGTCAGTCAGCATGTTCTTTAGGAGTGGTCAGGCAACTGTTGAA
TAACACACTTTATATCACATTAATCATTCTATAAGAATCACACTCAAGCT
TGAGCATTTAGAGCATCTCCAATGGTGCTCCTAAATCATTCGTTAAATAA
TAATATCAAATGTGGCTCCTAATGAGTTAATATATTGAAAAACGTGAGAA
CTCCAATACTACTCTTCATGCTTAGCTCTTTATTCACATTTTATATTTAT
TTTATATAAATAAAAGGGAAAAGTTACCTAAAGGCTAAAAGAGAGGGAAG
CTAGAAGAGAAATTAATATTATATTCATAAATAAAAAGTTAAGAGCTACT
CCTACAAAAAAAAAAGTTAAGAGCTACTAGATGCTCTTTAAAAGAGAGGA
GAGAGAGCAGGCTCTTAAATTCTTAAAGAGTTTCTAAGAGCCCATTGGAG
CACCAATTCTTGACTTGCTCTTTAAATTTAGAGTTAAGAGCTTGTTTAAA
GAGCCCATTGGAGATGCTCTTACCATAATACTAAACTTGGCGGTCTTGTT
TTTACATAAAACTCAATTCAGTTGGCCCCAAATATTATCGCCTTAAAAAT
TAATTTTGGACAACCTATAATTTTGTAGAACCTTGGACCTCAGTTGAGAA
TCTGAACATGCAGGTAAGTTGACATGCCCGTGAGGGACTCATTTATACAC
CTAAACTGTAACCTAGGTCTGCTGGGTAGATGGCATGCAGGTGGAAGTTG
TCACGTGGGAATGTATTACTTTAGTGGATGGCTGGTTATGATGAACGGTG
CTATGTACACTATTGATAACATGATTGGCATTGATGAGAACGTCTTGAAT
TTGATTAACAGAGATCGTTAATCCCCGGCCTTTACTAGGCAGAGCCTTAA
GTGTGGACTAGAATCGACATCAGTAAAATAGTAAATTGAGTCCTTGCTTT
GGACACCAAGTGTCCAAAGTTCGTATGCAGTATGCACACTTCACAATAAG
CTTTTTGCTTTTGATTCATTATATGCACCATTATTATTATTTCGTCATCA
CATCGTTTGCTGGTACAAGTTTGTGAATAATTTCCTACAAAAAAGGTTGG
ATAGGGATGAACAACATGAAAGATATGTTGGACATAATAATGTATGTTCA
CAATTTGTGATCTCCTGGAAATGCTAATAGGTTACCGTACATTCATACCT
CCTCAACTGATAAGTAACCCAAAACAGCCACAAGTACTTTTAAAAATTAG
ATATATTGATCTTCTGACTAGGAAATGCACCATTGTCTTATGGGAGAGCT
GTTGCATCTCATGACCTGTGCCATTCTTCCTGCTCATTATGTAAACCACA
TTGGTCTAAGGAATTGTATATAATAATAACTGGTTGTGCATTTCTTTAAA
CAGATTAGGCAAAAATGAAACTAGACCCATAATAGGGGCTAGATAAGTTT
CATTTTTGGCCAATCTACCTCCACTTCTCAAATTATACTTCACATTCTAC
AAATTAAAATAAAAAGTTGTTCTGATGTATGTGCATCTTTTCTTAAGCAT
GGTTAATAGTATTGGCTTCTTAGTGTTTGTTATTTCTCTTAGGTATATTA
AGGATCTTCTTTTGAATCCCCCTTCTTATGAAATCGCATCAACAATTCAA
GGTAAGTGGTCGTATATTCTACCCCTTTACCCTGAAATTGAAAGAGGATT
TTAAAACTATGCTCTGTGTATTAGTATCTATCTGTAAATAGTATATTATG
ATTGTGACAATTAGTTTACAATCCTAGAGCAAAATCAGTTCATATTATAA
TTTCAGATCAAGCAATATAATTCTAAATGACATTACTGGAAGAATGAGAT
ATATTTAGAGTTAATAAAAGTTTCTTAGTTTATTAATGACTTGCTTTATT
GTTAAGCATACTTTCTATATTGAATAGTGAAAGAATAAAAAAGTTGTTGC
AAATGAGATAATATATGCTTTGACCAACCATGGTTCAAGTCTGCTAATCA
TCACCTATTTGTCAAGGCTAACTAGTATACTAAGATGAAGGAAAAAGCAA
CTCGTTGCTGGTTATTCCGCATATTATCACTGCTTTAAGTTGTCATATAT
AAGGTATACCAGCCTTGAGCCTTATAAGGGGTGACAGTTTATGCTGGTGC
TAAGTCTGAATCTTCGTTAATTACTGCCTTAAATTTTCCCACTTCATATG
TTGATATACTTTCCCATATGATGTTGCAGCAATCTGCAAACATATGAGCA
GTATACCATGTTCAATACCCGAGTTTACTTGTGTTTCACCTGCAAAGGTT
AGTATTTAATTACTTTCCATTATATTTAATAATACATGACATGTGTTTTT
GGAATTGTCAAAGCCTACAATTGGCATTAAAAGATTTTCAGCTTTTGACG
AATATAACTCAGTGAGCATGTTCTTATTAGTAGTGCTTTCTGTAACTGTG
TCTCCTTCTACATGAATCTGGCCTATAAACTGGATATGGTTGGAAAAATG
GAGAAGTTTCTGTTAGCAATAATTATATCGTTTTTATGTTAATTATGAGT
ATGGTAAGTAACTGTAGCGTTTTGGTAACTCAATTGAAAGTTTACGTATT
CCTAAGCATAATTTATATATCGATCTTATAATGTTTCGTTTGCATAGTAT
GTTTTATGACACTTGTCTCATGCATCTACTGCAGCTAGTAAAACTACTTG
AGTCGAAGGAGGCTAATCATATTGAGTTTTGCAAGATAAAGAATGTGCTT
GATGAAGTTATTCAGATGCACGGGAACTCTGAACTCCATGAAATTCTAAA
ATTATTGATCGATCCTACTTGGGCAGCAACTGGATTGAATATCGACTTTG
AGAAACTAGTAAGGATAATTGGTGTTTTGCCACTTTTCGTGGGTTATTTG
GAATATTTGAAGGAAATTATGATACTGAATCAGTAGAAAGTGTATGCAGA
GGCAGACTTCTGATAAATAACTTTTTTTTTATTTTATGAAATTGATACCA
GGGGCCATTCTTTGTTGTGAGAGCACTAACTTGCATGCATTTTGTTTCTT
TAAATCGCTTTGCTAGATGTCCATCTTCCTAAATTATAAGGTGTTGGGGT
GAGCCACTAAAAGGATCTTATACATATATGACTGCCTGGTTGTTGAGGTT
AAAGAGTGGATCACCATAACAAACCTTAGTGTTATCACTGCCTAATTTTT
TTATTTTTGGCTTGCTGCTTCTTCTGTTGGTTAATGGCTATAATTTTTAT
TACACGACACATGTGGAAGCTAAAGTATTATATATTAGAACTTATTTAGT
CCTGAGTTTCCAAGTTTTTTGGGTCGTGTGATGGTCATCCTTATAAAGTG
CTAAGTGACTTGCTGTCAAGTTAAAAGAGCTTGGATTTGATTATTATAAT
TGTATTCTGTATCTTTTACGTATAAAATGTTACATATTATAATATATGAA
TTGTAATTTAATACAGTATTATGAGTCCAGTTCTTTAACCACAGTTCTAC
CGAAGCTGACTTTGGGCGAATCGAACTTACACCATTGGTGGGTGGAATGA
ACTTTGGGGATTTCCGCTATAATATATAGAGGCGAAAGTAAAACCTCCAT
TAATATTATCCATCAGCGGGTAAGATGAAAAAACTCGAAACAGGTCCTTG
TCCAACTTTGGTTGGTGACACATTTCCATTATATATAAAATATAATATTT
TACATATCAAAGTTGCTAGTAATTTTCATTACAGTTTGCTTGGAAAATTT
CCTAAGTGGCCGCTTAAGCAATAAAAGATCACCTAGCTGCTTAGGACTGC
TTACACGCTTTTTAAAATACTGCTAATCCCATGTGACCATCTGTCACAAA
ATTTTATGGTGTTGTAAAAAGCTACCAAGTGGGTCTCCTACATTTAACAG
TTTTGTTGTGTACTGCTGGTATTGGTTTTCTTTTCTGTAGCTTTTGTTCT
TACTCGTGCAATTGCCATGTTAAGCTAGTTCGATTTATTCCTGAACTTAG
TTCGTGATGTTCTTAATACGTATATATCCACAAGTAAAAGTTTGAATTTT
GGCTTCCATGGTTTCTTTCATCTTGTGGCATATTTACTCAGCTCAACATT
TCACGTGCTTTCAAGCCGCTTCTATATGAGATTGGACACAATTGTTCATG
CAGATAAAGATACTTTTGTTAAAGTTTTCTCTTCCTGCATGTGTCTCTAA
CATGTCTTATCATGTGTATTTGTAGGTGAAAGAATCCGAAATGGTGTCTG
GTAGAATCGGTGAAATTATTTCGTTAGACGGCGATAATGATCAAGAAATA
TGCTCCTATTCAGCCATCCCAGATGACTTTTTTGAGATGTTGGAGTCATC
GTGGAAAGGTCGTGTGAAGAGAATCCACCTAAACGAAGCTTTCACAGAAG
TGGAAAAGGCAGCCGAGGCTTTGTCATTAGCTGTAAGCCTTTTGCACTAT
TTTGTTATAGATAGGTGATAGGGAGTAGTACCATACATAAAGTTTTCGCT
TGAAACTTGCCCTTGTTACTTTTGTCATCCTTTAATCATGCATTCTCTTG
AATTTACTATGGTTTATTATTATATACAAGTAAAAAACAAGGGGTTCTAT
TTTGGAACAGACGTGTATTAAAGAAAGTTCGGGGTCCTCTAGTTAGATGT
GGAATTGAATATGACCAATCAGCCTTGCATTCGTGATGTGGAGCTTCATG
ATTTCTGCACAAGTGTTATGGCATACCTCCTATTTTCATGCATCTTTTGG
TAGTGAACTACTGATATTTTTACTGATGGATAATCCAACTTACTGGGTGC
CTTTCTTCCATGGAGCATTAAAGTTCTAGATACCATTACTCGATATGGGT
TGATACTTACAACCCAACTCTGTTAAAGGTTGAGGTAATGTGCCTGATGA
ACAATGTCGTGGAGCAGTTGTGGTGAGAATAAACATACTGGAAGGGGTTC
CCACTTCCCAAAAAAAAAAACTGTAATAATTAGGAGAGGACCATAATTCC
GTTGTATTGTTAACATATAAAACCAACTGAACATATTATAAGTCGTACTT
AAAGGCCTCTTAGTTTAAAGGATATTTGCAAACTGATCAAGAAACCCATA
GAACAGATGGTACATTTAGGGCACAAGAGACTGCTCGACTATATGCTGCC
TCTTCCTCTCAGCATTCTCTTCAGTTGGCTTCCTTGTTTCTGCATCGGTT
CTGTAATAATTTCTTAAACTTTCTGCGTGTCTATGTTTGGTACGCAGTAT
GTAAATATTTTATAGGGTGGAGTCTTTGCAGTATGGGTCACGCTCTATGT
TTACTCGGACTCTTTATTTTGCTCGAATTACTCGTGTCGGACACTCGACA
CCTGGACGTGGACTCTTGTACTAGGACACTATTTTAGGCAAAAAACATGT
AAATTTATCAAAATATTATAGAGTTCGACACATGGACACATATTCATGTC
GGACACTCTAGCCGAGTCCGAGTAACATACTCACACATTCACACTAGTTA
TGCCATATATTACTTGTATTCGTGCATTTACTCTAGTTTGCCATCTTTGA
CACATCTAGTGGATGCACTTTATTGTTTATAAATTTGACATTATAATAGT
TATATGCTAATGCTAATGTTTTTTTACCCTAAATTATACTCTTTTTTTTT
AATTTTCAAATTTTAATATTTGCAAACTATAAATTCAAATCCTCGCCTTT
CGACCTGAATTTAGAAACAAACAATCATTCTTACAGATGTTTGATATTGT
ATATTAGGTCACAGAAGATTTTGTACCTATATTATCAAGAATAAAAGCGT
CGACAGCACCACTTGGAGGACCAAGAGGGGAAATATTATATGCTCGAGAG
CATGGAGCGGTTTGGTTCAAGGGTAAACGATTTGCGCCATCTGTTTGGGC
TGGTACACCTGGAGAAGAACAAATAAAGCAGCTCAGGCCAGCTGTAGATT
CAAAAGGCAAAAAAGTTGGAGAGGAGTGGTTTACCACAACGAAGGTGGAA
GTTGCATTAGCAAGGTCCAAATTTCTGTAACTCAGTCAAAAATTAAATTG
TACTTCCAAAATAGAGAGTGAGTTCATTTCCTATGTCTCAGGTACCATGA
AGCAGGTTCTAAAGCAAAAGAAAAGGTCTTGGAATTGTTGAGAGGACTTT
CTGCTGAACTACAAGCTAAAATTAATGTTCTTGTCTTCGCCTCAGTGTTG
CTTGTCATTGCAAAGGCCTTATTTGCTCATGTGAGGTCGGGTATACTGAT
TTGCAGTGTTTTTCTTCAAGTACTTATACAATAGACGCTCTTTGCTTTCG
CTACCAATCTCATTGTTTCTTTTAGCTCCTAAGCCTAACGAGATGTTTAA
TATAAACGCACTATTAGCTGATTCCTATGTATTAGTATATTCCAAAAAAA
GATATAATTAACGTATTATTAAATAAAGTATTTATTTCTTCGCTTATGTT
GGAAAGAAGGACAAGATATGTGTCCTAAAATTTTAAATTATTAGCATTTC
TTTTAATGAACTAAGGCTTATGTTTTGGTGATCCCTCCAAGTATATTAGA
ACATTTAGATATACTTGGGTGCTCAAAGTATTTTGTAGTTCTACACAATA
GATCTTTAAGCGACGTGGTTGTAGAATTGATTGCAATCTGCTACCGAACA
ATCTTGAGGAGTTCACTCTTCTCCATCAAATCAATTTCACAGTTAATAAT
ACCAATCACTTTAAGAGATTAAGAAATTACATCCCTTTAATCTGTTTCAT
GCTTAGACATAATAACAATTCCCATGTATTTTTTTATTTTTTTTGATACA
GTGAAGGGAGAAGAAGGAAATGGGTTTTTCCTGTCTTATCTCAGTTTGAC
AAAGGTGGCAGTATGAAGCTAGTTGGTCTATCACCATATTGGTTTGATGC
TGCAGAAGGCAATGCTGTACTGAATACCGTTGATATGCAATCACTTTTTA
TCTTGACTGGACCAAATGGTGGTGGTAAATCCAGCCTGCTTCGTTCAATT
TGTGCAGCTTCCTTACTAGGAATATGTGGATTTATGGTTCCGGCTGAGTC
GGCCTCGATTCCACATTTTGACTCCATCATGCTGCATCTGAAATCCTATG
ATAGTCCTGCTGATGGGAAAAGTTCATTTCAGGTTGCTTGCATGTTTAGT
TGTCTGCACCTCATTATATTCGTGTTCACATTTCCTCATATGTTTTCACC
AAAATAAATCATGTTTTAGAATTGCAAAAGGATGCTAGTTTGGGTAGCCT
GAGCAGTAATGATAAGTGATTGTACGACCCAGGGCTGCATAATATGACGC
GCGCGCGCGCGCACACATATATTTAAATATTAAATTGCAGTGGCTTACAC
CTCACAGTCAGAGATTAGGGTATATTAATTAAGTTTTCATAAAAGTTGGC
ATATTTCTCATATAACGAATTCTATATAGCTTACTCTAGCTCAAATTTAT
TGCATATTATTATCTTGAGTCCACTCTAATAGATATTTTTAATTAAGGTA
TGTTGTCATTGTGATATGATATCAAGTTTATGTTCATTACACTGAACTTG
GCCTAGATTTTTCTGAACATTAAATGGCTGATAATGGGCTAAAAGATCCA
ATATCAGAAATAGTCCGGCTGAATTAGTATTTTACTGATCTTAACTTAAT
GGCATGCCCTCTTTAGTTATTGCCTTAAATTTGTGTTGCCTTTAGGACAA
TAATGAATTGACTATATCACATGCACTATTATTTTACTTTGTACTTTTCA
GATTGAAATGTCGGAGGTTCGTTCTATCATAAGTGGAGCGACTTCAAGGA
GCCTTGTACTTGTAGATGAAATATGTCGTGGAACAGAGACAGCAAAAGGA
ACTTGTATTGCTGGTAGCATAATTGAAACTCTGGATTTCATTGGCTGTCT
GGGCATTGTGTCTACTCATTTACATGGTATTTTTGATTTACCATTGACTA
CAAAAAAGACGGTACATAAAGCAATGGAAACTGAATATATTGATGGTCAG
CCAAGACCGACATGGAGATTGACAGATGGGATTTGCAGAGAAAGCCTAGC
TTTTCAGACAGCTCAAAGGGAAGGTGTTCAGGAAACAATAATTAAGAGGG
CTGAGGAGTTGTATTCTTCAGTTTATGCAAATTATTCTTGCCTGCAGCAT
GAAACAACTGTTGAATTGTCTACTAGTGATAAAAACAGGATATTTCATAA
GGCTTACGAACAGAGTGCCGGGGAAAAATCTGCATGTTCCGTTATGGCAT
CCACAAACCAAATGGATGTGCTATGGAAGGAGGTAGAGAGCGCTGTGACG
AAAATATGTCAGAAACAACTGCTTGATTTTTACAAGAAGAAAAATATTTC
AGAACTTTCAGCTGTAAAATGTGTTCTAATTGCTGCTAGGGAACAGCCAC
CCCCGTTAACAGTTGGTGCCTCAAGTGTGTATGTGTTGCTTAGACCTGAC
AAACGACTTTATGTTGGAGAGGTACTTGACTTCTCTTTATTTTTTATACT
GCCAGCATTATATGTTGAAGCAGGTTATATATATTTAAAACGTTTTCCGA
CGAGAAGAGTCCTCCAACTATCTGACCAATGACACAATGTTATCAAATGC
GATGATTGATCATGGGGTAATTAGCATGTTAAATATATCTTTAATCCTGT
TTTGTTTAGCTAACAGAATTTATGTGCATGATTCTACTTACTCTTAAGTC
TTAACAGAGCAGAGTGTTTTGAGTTGCTTATACCTTAAATTTAATTGTTA
GGTTTAACTAGGAGTCCTTGTAATGGGATGAGTATCCATTTACAGAGTAA
ACAGCAGATCATGTTGCTTTAGTTTATTGCGACCCAAAAAATATTTGTCA
TAAATAGTTTCAAGTTTATGTATGTATTCTCTCTTTATATGTGGACCAAG
TTAATTTTATAATCATTCTGCTACAGACTGATGATCTTAGGAGCAGGGTT
CGTGCCCATCGTTCGAAGGAAGGATTGCAGAATGCTTCATTCCTATATCT
CTTAGTCCCTGGAAAGAGCATAGCTTGCCAGCTAGAAACTCTTCTCATCA
ACCAGCTCCCTAGTAAGGGGTTTCAACTAACCAATTTAGCTGACGGCAGG
CATAGAAATTTTGGTACTTCTGACATCTCCTTGGAAAATGTTACATTGCA
TAGATGATGCCATTATGACAAATTGTGGTTCATGTAAAGATGCCAAACAT
TTTGTAAACTTTAGCCTTGATGTATAATCTAGTAATTTAAGTCAATTAGT
GAACATTCTAATTCCTTTTACAGTTGTGGCAGAAATTTTGGGTTAGATGT
CTGGCACTTCTGTTAAAGGTCTCGCCCCATGCAACTAGAAAATGTATTTT
CTTTTATTGACCCGTACCCTTTGCGTTTGCCGTCTATGAGTAATGTTACT
TTTCCTTGCAGTC
Sequence Length:
18513
Sequence Checksum:
faedf9512ab382f847f1386b5f46dedb
View location in JBrowse:
Gene:
LOC108199558
Gene Biotype:
protein_coding
Gbkey:
Gene