Resource Type:
Gene
Organism:
Name:
LOC108199389
Identifier:
LOC108199389
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017367183.1, is a part of gene, LOC108199389. |
| The genetic_marker, MK006285 K3729, is located in gene, LOC108199389. |
| The mRNA, XM_017367184.1, is a part of gene, LOC108199389. |
| The mRNA, XM_017367185.1, is a part of gene, LOC108199389. |
| The transcript, XR_001802397.1, is a part of gene, LOC108199389. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017367185.1 | XM_017367185.1 | mRNA | DCARv2_Chr8:27808405..27821961 |
| XM_017367184.1 | XM_017367184.1 | mRNA | DCARv2_Chr8:27808405..27821961 |
| XM_017367183.1 | XM_017367183.1 | mRNA | DCARv2_Chr8:27808405..27821961 |
Sequence:
TAATAATTGCATCGAAGCCTATTGGGCTGAATCTCTTTGATACCCATCAT
CACCAACACACTCAACCGCCTCATCATCATTCTTCCCTCCCTGCAATCTC
TCTCTACATTACACACAACTTTCTGTATCTATATCTTTCACACACACTCT
CCGCTTCAACAATTCTAGACTCTTCTCAATCCCACGTCTCAATTGAGTGT
CGGAAACGACGTCGTAGCTTGGTTTTCGAGGGTTTTGTGGCCGCCCATGG
CTCCGGGGCGAAGGCGCGGAGCGAGAGGTGCGAAAACGAAGCAGTTGAAG
TTGGGAGATCTTGTGCTCGCTAAAGTTAAGGGACACCCTGCCTGGCCTGC
TAAGGTTCGTGTTTTCGAGTTTTCGTGTTTATTGTATGTCTTGTTTCGTA
ATTGTTTGCGTAATTTTGGATGATCTTATGTGGAATTAGGTTTTGTTTGT
GGCAATTTCGATACGCTGCGGTGCGATTGTGTAATGTGTAGTTTAATGTG
TGTTATTATTTGTAGGTGTGTAGATAGACGATATGGATTTAGAGTATTAC
TTGACCCTAACATTGTAGAGAACTTTAAAATACGAGCCTATCGTAAATTG
GAAAGAGTAATGAAAAACAAGCGTACTCCCTCGGTTTCAATTTACATGTC
CACTTTTAAGAAAAGAATTTGTTTCGAATTAGTTGTCCACTTCAACTTTC
AATGCAAAATCATATTTCCAAAGTCAATTTTACTCCACATATCTTTTATA
TATATTTCCTAGATCAACCTCATACCACATATTATAGTCATTTAATGCAA
TTAATTTGTGAACATTCACTTTTCTTAAACCGTGTGATTTTTTTGAAAGT
GGACATCTAATTTGAAACGGAGGGAGTACTTAATAGTATAAGGAGACAAT
GTAATTAGAAGAAACCATTATTGGACGTCTATGTAGCCGTTCACACTATG
TACTAGTCAAGTTTGGTGTACGCGTTTTAATTGAACTGTTAGTTTTCTAA
ACTTATTGAAATTTTAGGCACTTCAATTCGTGTTAGTTATGACTTTTTAT
AAAGGTCACGATGAGATGTAAAACCTTTATATGTATAGGCCTCAAGCTTA
ACAACCTATTAAATGTCCTTCGAGGCTTGCCCTTTATATGTACCCCTGGA
GTCCTGAGATATTCTTAGTATATACGAGAACCAAAATACATCCCCTCCCG
ACGTGGCCAAACCATCAAAATCTCCCCTCTGTTGCTATATGTGCAAGTTT
AAGGCACCATTTATTATTAAGTACAACATGGTGCAAATGTTGAGCACTGT
GTGACTTTCTTGTCAAGTAACACTCACGTGGCGACACTTTATTTTATTGA
CCTTGTATTTGTATTTATACAGTGTGTAACGTCATACCCGACCTCTTATT
TCCTCATGTTGAAGCCCAAATGCTGTAGTTGACATTTTTCTTTCAGGAGA
CCTTATTGCTTTTTGAATTTCTATCCCCTTCTTTGGGGTTCCTGCTAGAG
GCATATATATGTTGAACAGCTAGTGCATGACTCTTGAGACACTAGCGCAA
TGTCAGATCCATGACAAAATTACTATAAAGATTAAAATGAAACGAGCTTA
TAATCTATCCATGGAGAAACTTCAACTCAACAGAAAATCCTCCTTGTTCT
AATACTAATTCGCAAACCAAACTTAAATTAATTGTGAATATAACTGCACT
TCAGTAGCATCTTCCTCCAATAACACATGGTACTTACTTTTAATTCATAT
TATATCCCTGGTAGAGCTTATGTCTCGTCGCTTCCTACTTTCTATTTTTT
TGCTCAAATGATTTTTTTTTTTTTTTTATAAAAAAAATCCTCATTGGTGT
TTAAATAACTGGATGTTGCCTTGTACACCTAATCCCCTCGCCCCACTGCC
ATTTCTTTTGCTACTTGTTTTCTTTTCTTCTACAATTCTTTCATCACAAT
CCATCTGTTCTTAACCAAGTCACTAGCTCTATAAATGCACTTCATCCTTA
ATTTTCTCTTGCATGTTATCTTAATCCAACATCAAGCCTCCTTATGGTCC
TTACCTTCCTTACTGCTACCTATGAAGTCTTTATAGCCACACTCTTAATC
GTATGGACCATTTTGTTTGTATTTGCTAAACATTTTTTTACCTTGGATTT
ATCCTATAATTCCTCAATTTTGACACACTCTGGGCTATCCAATAGAAATT
TTTTAAGGAGTCTCTTACGTAGGCTTCTTTGCTCAACGAACAACCATCTT
TACTCATCAGACAGAATGCAATTGTGCAAGCCCTCTATGGATTCCGTCAG
TGTCGTACAGTGTGCAAATTTAGAAGTAGCGCATCAGCCAATTGCAAAGC
TTGACTTGCAAAGCACACTTTAAAACATTTTTTTCGCAATTAGTCAATAT
CCCTAAAATCATAGGGAAACTATAGATATAATCGAATTTGCAATTCTAGT
AGAATTTTCTTTAATAATTGTCAAAAACATAAAGTTTAATGCTACTATTA
GGTAAGGTTAGGAATATTCACTAGTATTCTGATGAAAAATTATTATGCAA
GGTGCTGAAGTATTTTCGAAAAGCATTTATTTAATATTCTACCTATTATT
ATGTTGAATTATTAGCGAGGAGGGTTAGAACATTCGAATCAGATCATTTA
CATAAGAAGCAATTTTTTTTGAGATATATAGTGCAATAGGTCCTTTTTGA
CAAGTGTTTAATGTATCCTTTCTGATAAAAGCTTTACAAGTTGAGTTCCG
GTTTCCCCAGTAAAGAAAATCTGGGAGGGAATGTAAGAATGTTTCATTTG
ATTCTTAAGAGACAAAGAACTAGTATCCCTGTGTTGACCTAATAAAAAGC
TTGATCTTATAGTTCCTGTATGAGTAAGACTATATCATTGTGTGCTAAAT
GCACATATAAGTTGAGGACACAATTTTTGTATATTTATTTATAATATTTA
TATGGCAGAAATATTACTTTGTGTGACTACTAAAGCATAATTGTTTTGTC
TGATTTTTTATGTGTGATTGTATTTCCCAGATTGGCCGACCTGAAGACTG
GGAGAAAATTCCAGATCCTAAGAAAATTTTTGTGCACTTCTTTGGAACAG
ACGAAATGTGAGTGCCTTTTCTGTGAATTTATATGTAAGTTTGCGATAGT
GCTTTTGATTTCCAGATGCATCTTGTTTTTTAAGTAGTAGTGGAAGATAA
ATATGAGCCGATGGAGATATGGCCCGGACAGTATGGATCAGACTGTTCCT
ATATTAGTATGTACGAGCATTAAACTTTGTGAAGGGAGTTATGGTTTTGG
ATTGAGGAAGAAAGTTACAAGTACTACAGAGGGTAGATGGGAGAACACTC
GGAAGGGTGGGGTGAAAACTAATGCCATAATTCTCAGAATGTAGTTACAC
GGATCATATAACTTGGTGCAAATAAGCTGTCTTCTTTGAGCACTTGTGTT
AGGAAGGCATGCATTGTACTTTTTGATTTTCTTTAATGACTCGTGCATGA
GTGCTGGTTGTCTAATTTGTATCATGGTCTGATGTGCACCTAATTTGTAG
ATGTCTGATCCTATAACAAGTATTAAATCCGGAAAACATGCCTGACTCTG
TGAATATTGCACTGTTAGTATATAGGGAACTGTTGTTCAACAGAAATAGT
CTAAAAAATTAGTTAGCAATGCACTTGTGTTGTGGCGGAGTCATATTGAT
CAAATTTGTCTGATAATAATTATTATTACTTATTATCCATCACAATTGCT
TATAGGTTGTTCTAGTTGTCTATGTTCAAATATGTTAAAGTTCTTCATTG
AATAAGTGTTTATCCATGCAACCACGTGCCATAATTGATGTATATGTTAT
AATTTGCCAAATAATACTTTGTATCTTATAGGTGTTGATGTTTTTTTTTT
CCTTTGGATCAGGCATCCTAATATTGATTGTTCAATTCTCATTAAAGTAA
TCGCAGTGGTTGAATTTTTCTTACAATTCGTTTTAAATTGTCGGAGTAGA
AGTACTTTAATATACCAGATATTGCTTTGCTCTGTTGTAATCAGAAGTCT
GAGGATTAATCTTATGGTTTGTGAACGAATAGTTGACAAGTTACAAAATT
AATAAGAAGCTGGTAGAAATAATCTGGCATCAATTATGATTAAATTGATT
ATGTAGTTTCTGACCTACAAAAGTTATTGATCATAGCCTGTGCCCTCTTC
TTTTATATGCTGTTACTGTTCAGTTGGATTTATATGTACGTGATATCCAC
GATGAGCTATATATGTTATATATGAGTTTCTTATGTACTAAATTACACAT
ATGGCGATTTGTTTACTGAGATGCTTCCCACAATCTTTTCTATAATTTTT
TTTTTCAATACTAATAATAATGTTTAGTTGTAAGAGTAACAATTTTCAAA
ATGCCAGGTATATCGTGTACTATACTCTTTTGTGCGTTTTGAGTTTTATT
CATATATTTTGCTGATAAATTAGTTAGACCAGTAACATTCTCAATAAAAT
TTTAGTAAAAATACTCATGCTAACTAGACTTACTAATGTGGTACCAGTCA
CAGCGCACAAGTTATAGTTGATCATGTAGTTAAAATTGACCAACAAATTT
AATAGAACATAGCCTGTTCCTTCTTCAGAAATGCTGTTTATGGTCAGTTA
TAGTTATATATAACGTGAGGTTCAGGATTATATATACGTCACTATTGGTT
TTGTATATATTTCTTTATACATATGTCAATTCTGCTTCTCCCAATCTTGT
AAAATAATAATGTTTCTATCTCTGTTATTATTTTCTTTAATTTTTACTTG
ATAAATTATTGTTTTGTGGTAATAGTGCGCTGTATAAAGAAGAAAGCAGT
AATTTGATATGCTTAAATATGATATACATGTAATGTTGCTGTAATTGGTT
ATTCTGTGATTGTCTGTATATTTGGTTGTCAGGGTCAAGGTATGGAAATA
TATCGTGATCATTCCTAATTTGATATTTAGCTATGATGTCAGTAGCCTTC
TCAAAGGGGTTCCGATTTAGTATCTCATTGCTGCTGATTCACAATTATTT
ATCGGATTCTTTTGTTCACAGAGCTTTTGTTGCTCCTGCCGATATTCAGG
AATTTACTATTGAGGCAAAGAATAAATTGGCAGCTCGCTGCAAAGGTAAA
ACTGTCAAATACTTTGCTGATGCTGTGAAGCAAATATGTGCAGCATTTGA
GGAGCTACAGGAAAAAAGTTCGAATGGTGTGGGAGCTGACACTGATAAAT
CTGATTTTGGATCCGAGGCTCCGTCTGCTCATAGCGTGCCAGATGATGCT
GGAGTGACTGCCTTAGAAGTTAAAAATGCTGTAGATGAGCTGCATGGAGA
GGAGGTGCTTGAAGTCCCAGCAGATCACAGTTTTGGTTTGGAGGGCTGTT
CCCAGAGACAAGGTGAGATGGACAGTAAAGACAGCAAGTCAAAAAATAGG
GAAGGCACTGTAGTTCCTTCAGAGCCCTCTTGGATAGTGAATCACATCAA
AGGCTTGATTGCTAGTAAGGACAGTAGTCATTCTGAGGCAGGACGATCTT
CGGGTGGAGGTGGAAAGGACAGTTCTTTACCAGTGCCTTCATCAATTAAT
CCACAGTATGTGGATAGTGGACCTAAAGAAGCTACAAACGGTCACAACTC
AAAAAAGATAATTTCTGGGTCAAGAAGAAAGCTTCAAGCTGATAATCAAG
TGCAAAAAGTTAATCGTTCAGGTGCAGACAAGTCATCGTTACATGGTAAT
TCTAGTGATCATGCGAATATGCTTAAATCTGGTGAAGGTAGAGCATGGAA
AAGGTCGGGTTCCAGTGGTATAAAAGAATACTCTCCAGATAAGTCAAGAT
CTAATCTGGATATTCCAAGTGACAAAAGAAAAAAGCAAAATTTGACAGAT
AAAGTACATCCTGATCGAGCAGAAGATTTACTGGACAAGAAGGTTACTAC
TACTAAGAAGCATGACGTAGCTGACCTTTCTGGCAGGAATTCTGTTACCA
AGTCCCAAATTGGTCATGGAAAGAACAATTTGGTAATTGATGCGGCTTCA
CATCCTGTCAAAAGATCTAAATCTGAAGATATTACCCTTGATAACTCCAA
GGGGTCTGTCCAAAAAAACCAGCACAATGGCCAACTTGATAATAAATCAA
GGAGCACAGAATTTAGAAGGTCTATGTTGCAAGGTAATGTTGAAGACTGC
TTTGCACCTAGGGATGAGGAGGTTTTCCCGCCTAATAAGCGGCAGCGTCA
GGTACCTGACATTGCTGATGGCTCTTCCACTAGGGCATCTGACAGCAAAA
CAGGAAAAGGGCCTGTTCGGAAAAGTGACAGTTTTTCTGATAAAGCCAAA
TCACCAGCTGGTCAATATCCAAAAAAGCGGAGAGCTGTTCGCCTGTATGA
TGAAGATGATGATGAGCCTAAGACTCCAGTTCATGGAGGACATGTCAGAA
AGGTTGATGCACCTTTAGGTGTCTTGGGTTCTGTAAAAAATGGTCCTTCT
AAGAGTGGACAGGCGACAGGCATACTTAATGATAGCGTCCCATTGAAGGT
GTCTTTGTCAACTGTCAAAGTACTTAATGAGTCCTCGATGAGTTCTCACA
AGCATGTAGAAGTACAGAACCCCATACAAGCCTCGACACATATTCCCGTT
AGTCATATGAAAGCTGAATCCGTTATGAAATCTTCTGAGGAGTCAAAACA
ACTTGGACTATCTCCAGTGCAATCTCCCTTATCGGTTTCCACTAGGAAGC
CTGTCGTAGAATCTCTTAAAGCCAATATGCTAGTGGGCAAGACATCTGAT
AATATTTCTTATCGGAATTCTCAATCTAAGTCTAATAAAAACATGGTTGT
GTCTCCTGATTGCACAAATCATTCTCCAAGTCAAGGAATGCGTGAAAGAA
ATAAATCTATTGCTTTTGTGGAAAGGAAGAAAGATACTCCAAAATCAAGC
TCAAGGACGAATGACTCGATTCTTTTAACAGACAAAACTTTGGATATCAT
TTCCAGTGGTGACAGGTATGCTAGAACCTTTGTCTGTTTGTAATATGGCA
TATGTTTGTGGTAGTCTTATGTTTATTTGTTTTGTGATAAAATAGGATGG
ACAAAGACAAAGAAGCAGCCAGAGAAGATAAAATGTCTGTGCTCTTGGAT
GCAAAGATTGAGGACTCGTCTTCATCTATGAAGCATCTTATTGCAGTTGC
TCAGGCGAAAAGAAGAGAAGCTTACTCTCAAAGCTTTTTTCATGGAAATT
CTTATTCCGATGTGTCTGGAGGGAGTCCCAATGTCGTGTTTGCTATTCCA
CCTATTCAACCAAGCTCGATCATCCAACCTGATACTCATGGATTTAATGC
TCAGTCAACTGTACCTTCTCCATCTTCTCAAATTCCTCGGCCTTCAGCAG
ATAATCATCCTGAGATTGAAGAGTTTGAGGATCTAAGATATGGTTCTGGG
CAGCGAGCTGCTAATGATCCTCTTACTGGTGGCACTGAGGCAGCTGTTGC
TCGTGATGCATTTGAAGGAATGATTGAGACCCTCTCACGGACTAAAGAAA
GTATTGGGCGTGCAACTCGTCTTGCAATTGATTGTGCCAAGTATGGTATT
GCCAATGAGGTAATAGATTATGTTAACATTATTTTTGCTAAATTATTATA
TCAAGATCTGCATGTTTTTATCTGAAATAACTGTTTTTATGAGTAGAATG
TGGCTGCATTGTACTGATCTATTGCACACACTGTTCTTTTCATTGAGAGT
TGTCATTGATGCGATAACGTTCCTACAATCTTGTCAATTTGTAATAATAT
TATAGTTCTGGGGAAGCCTTGTCAGTCTTGTCCGTTTTTATCATAGTTTT
TGTCTTTGTTATTTTTTCTCTCTTCCTATTACTTGGTTATACTGCTTGTG
TTCCACAATCTTGTAAAACCTGAAACTTGCTATTTCTGTTCTCCTATGTC
ATATCATTTTTCAATTCCACTTGAGAGTTTTTTGTGCTGGAACTCAGTTT
CATTTTTGTTTTTATGATATCAGTGTTAATATAATTTCGTGTTTATTAGT
TTGTTTGAGGGTAAATATGTGAAGGGCTTTGTTTTCTTTTAGAAGTGATA
ATTTTATTCATACCTTGGACTCTTGGAGTAAACATGACTTCATTTATGTT
TTAAATCTTTGAATTGTTCTTTCACATATTTACTATAAGGTTTGCAGGGT
AAAGAAGATGAGTTTAATCTTTGATGAATTCGCGCATTTCGCGTTGCGCT
TATGCTCTAGGGGCCTTCTGACTATGACTGTTTTTTGCATTTCTAATATG
ATGTTTAATATGGTTTTGAAGAAATAGTAAAACAAGGGCATGGTATATTT
GTGTTTAGTTGATGGTCATATGATCGGTTTGTCCTTCAGTCGCACTCACA
TCTTGATTATCTCTTCCTATAAGTCGATTCCTCACTATTATCATTATTTG
CATTTCCAATATGATGTTCAATATGGTTTTGGAGAGAGTAAACCAAGGGC
TTACATAGTAATTTCTATTGCCTGCTATACATCTTTCTATATACTTGGTC
CTATGAAAGTGTTTGGCTACTGTTTCTCTGGAGGTATTTGCAGATTGCAA
TTTGAGGTATCTTACTGATGGTTGGAAAGTATGGCTGTTTAATTTCTGTA
TATATACATATTCTTAATCCCTGAGATCTGCAGGTAGTGGAGCTTCTCAT
TCACAAGTTGGAAACGGAGTCTAGTTTTCATCGCAAAGTTGATTTGTTTT
TTCTAGTGGATTCCATCACACAGTGCTCTCATAGTCAGAAAGGTAGGAAA
TGCAGAATCAGTATCTGTTTATGGTTGGTAGTGTAGTTTTCTTTATCTAA
TAAAAAAATGGTCAAATCTTTAGCATATGTGTGTAAATGCAGAACCTGTA
TCTGTTTATGATTGGTAGTGTGATTACTCAACATGTATGTGGTACAATAG
TAAAATGGGAAATATATTTTCTATATATGAAAAATGTTCCCCAGACTCTT
CATTTTGCCTCGAGTATCCGCGTCTTACACTCGACACTCGGACATAGGTA
TGAGCACTAAAATACTTATTTATAGCCAAAAATATGTAGGCCCCATTTGG
TGTTGCTGTTGCAGACAGCAACAATAGCTTTTTGCCGAAAAGCAGGTTAG
AAACTGTTTGGTAATTTCTGTAACAACGCTTATTTTACCGCACTTTTTTT
AACAACATAGTAGTTTTGAACAACACTACCAAACAAACCGGAGTACTTTA
AAAATGCCCAGTCTGACTTTTGGGCACGTATCTATGTTGTACACTTCCAG
TTCCAGAGTCAGAGTAAAAAAGAATATGAATATGTTAAATACAAAGTATT
AAAATTTAAATGAGCAGTAAATATTTTCTGTTTTAATTTAACAGATTTTA
TGTGATATAAATGATTATGAGTTTAATGAACTAAAGGAATTTAATTTTCA
TGTTCTGTAGAGTCTTTGGAATACAAGGAGCTCAGTTTTATAATGTTAAA
AACTAATCTTATTATAAAATTTATAAACACTGAAAGCAGGCGGGCTAAAT
AAAATAAAATATATTTGATTGTACTATGTGAACCAACAAGGTGGAACTCT
TTAAAGCATGTAGCCTTTTCATAATGTATAGTTGGTGATATCTTGACGTG
TTTTCGCCTCTTTTGCCTGATTGGTTCTTCTTTTTAAGGCATAGCAGGAG
CTTCATATATTCCTACAGTTCAATCTGTGTTACCTCGCCTCTTAGGAGCT
GCTGCTCCTCCTGAAGCTGGAGCTCGGGAGAACCGCAGACAATGTCTAAA
GGTATTGTTTATTGTAGTGTGAGTTGAGTATCAGTATAGCTCTTAGATTT
TCATCGGTATAGTTATTGGTTCGACCTTCCTATTGTAGGTCTTGCGTTTA
TGGCTTGAGAGGAAAATTTTGCCAGAATCTCTTCTTCGAAAATGTATGGA
TGATATAGGAGTTTCAAATGATGACTCATCTGCTGGAGCTTTTTCAAGAC
GTCCATCGCGAGCTGAGCGGGCAGTAGATGACCCTATTAGAGAGATGGAA
GGCATGCTTGTTGATGAATATGGGAGGTATAGATTAATATTTGTTATTAT
CTGAAGATGCTACTTTGTTCCTTATTTGAGTCGATATATGTGCATGAATA
AACACGTACCCTTGAACCTGGTTTTCTAGTATATCTGTCAAGTGTTAACA
CATATTCTCAGATCAGCTGTTAATAATTGCTGAACCTTATGATTAATAGA
AGAACAGCTAAATGTATTAACACTATGATGATTTGTGAGGCCCATCTATG
ATAAGCTGTGTCATTATAAGTAAAAGATTAGTTACAAGTCTAATGAAGTC
TAGGATGTGGAGGAAGTGCGGATCATCTCACTTGTTCAACTATTTGAAGT
TCACTCATGATGGATTTGCCTTACTCCTATAATCTTACGTTGTCTTGTAT
ACAATTATGTGGGTTTGCAAGGCTCTACTTGTTCATGTAGTAGAATTGTA
GTGAGGTACAATGTTACTATACTCTGGTCAAAGATGTCCTATATACCATC
TTAGTCATGCAATACAATGAGTTTCAGTGTTGTTGCAAGCTCATTTGATG
TTTGGACATGATTAATCATCTAAGCAGTATTAAGATCACAAGCACTGAAC
CTCAATGTTTCTTTGTTACTTACCATCAGGTTTTTCTTTCTACTGGAACA
GTTGTCAGTTGTAGTTTGTCTTCCATATTTATATGTTACAATGTTGGAAT
ATTAGTGGATCGGCGCTTGTTATGTTGAAAGAATGTGACTGATTGATTAT
ATCTGACTGCTTCGTTTTTTTGGTGGTTGTAGCAATACTACATTTCAGTT
GCCTGGCTTTGTGACTTCTCATGTTTTCGACGATGAAGATGAGGAAGACG
AATTTCAAATTCCTACATGCAAAGAACATGCTGCTGATATATCACCAGTC
GAGCTGACTTCTACAGCTGAAGAAGCTCAGAAGCTTACAGTCGACCAAAA
TGACAGGCGCCACTGCATCTTAGAGGACGTGGACGGTGAGCTTGAAATGG
AGGATGTATCAGTCCACTTAAAGGATGAAGGTGCTTCATTCGAAATTGTT
TCAAAAGAAGAGCAAGGTTCAGACATTATATTAGAAGCAGACTCAAATAC
ATATGCACAATTGCCTTTTCCTATGGGTTCCCCGCCATCACCTCCTGATT
CTCCTCCTGCAACTCCCCCTTTGCCCACTTCACCACAACCACTATCTATA
CCTCCTCCACCGCCTCCATCAGCTCCATTATCACCTCCTCCACCGCCACC
TCCCCCTGCCCAACAGGCACAACCACATCCTCCACCTCTTGTTAGCATAC
TTCCATACGTAGCTCCTCAGTCATCTGTTATACCTCAACCTTCTTCATTA
CCTCAACATGTGCACCCGCATCCATTTCAAGCATCAGTAACATCATCTTC
ACCAAATTTGGCATATCAACTTCAGGTACCCCATAAGCATTTTGTTACAG
CTAGTGCAAGGAACTGAGGCTTTGTCTTGTCGTCTTTTTGAAGATTTCTA
ATTGCAATTACTTCAATTTATTTACAGGGTACCCAGCTTTCCCAGTTGGC
CGGAAGTAATCCTCATGGAGCTCATATAGATGCCAATATCAGGAATGGGA
TGTATATACAGCCACCATCTTGCTATGCCTCTTCAGGAGTTGGCAATGTA
CATGAGCCTACTGGTTATAATTCAGGAAGGCCACTTGATTGTGGTAATAC
TGATCAGTACATAAATCATCAAACTGCTCAACCCAGTCAACAATTTCAAT
CCATGCCTATGTCACAAAGACCTTTCCATCCTGCTCCACCATCGCAAGCC
CCATCGAGTCAGTTTTCATATTCAAATTCAGCTGTCCAACAACGTCCTCA
GCATCAATACCCACAACCATACACATTACCATCACATCCTGATGGACCAA
GACAATATCATACTGATGATAAATGGAGGATGCAATCAAGTGAGTTTAGC
ACCAATAATCCTAATGGCCCATGGATAAATGGAACGAGAAGTTCGTTGGT
ACCACCAGTCCCCCCATTTGCTCATGACGGTATGCGGGCTTTCGTTTTTT
TCTTTTATAATACTCCCTCCGTCCTCTCATTTCTTTACAGTTTTTTTTCA
CTGCTCGACACTCATTTTAAGGCTCTTATAAAACATAGTTCCGTAACTTA
GTTTGAGATTTTCTTTTTGTGTATAAAAATTCATATATCAAATTTTATTC
AAAAGAAAATTAATTAAAAAATAAGTTACGGAACTATGTTTTTTAGGAGC
ATTAGAATGCGTGCCAAACTCTCGTCCCCCATGGTAAACTACCTGGGGAG
ACAAGAGGGAGTACCTTTTAGTTTTTGTGCCCCTCAGAAGCGTATCTAGG
ATGAATTATGTAAAAAATTGAACTATTAGTACACAACTACTCATTATCAA
ATGGGATAAGGGAAAAACAGTCTTATTAGCTTGTATAGAAAATTAAGCAA
ATGCCAGGTCTGAAAACCCTGAGCAGTAGATGCAATGCATAAATGAGAAG
GCATTTGAAATGATTTAGAGTTCAAGGCTCTTGTCTCTTGATGATCCTTT
GTGCTGGGAAGAAATATGATTATTTTTTTAATAAGATCCACAGTGGCAGG
TTATTTTCGGCCACATCTGGAGAGGCCTCCCTTAGTTCCTTCCAGCTTTC
AACAATCTGCTGTAAACGCAATTCCAGTGGTACCTCCAATCCCAGGTGAT
CTCTTTATGTAGGGATATTTTCTTCACGTCTTAAAGTAATTTCATCTAAT
TTATTTACTTAATATGCATTTTTTTCCTGCCATTTTGTCAGGACAAAATG
GTCCCCAGATGATCCCCTGTAGACCAGACATGTCTTCACTTAGTTCCTGG
AGGCCGGCTTAGGCCAATCTAATACTACATGTGTAAGTTTTATTTCTTCA
TTGCTTCATTTAGTTCTGTGAATAGTCTGGAATTCTCTCGGTAAAAATTT
GTCACGAGATTATGTGCTACTACAGTGTGTGTTTGTAGCTTATATGCTGT
TGACTTGCTTTTGTTGCATAGAAAACTCCTGTACTCTGTTTGATATGTTT
GTGCATCTTTCTCGAGAACCCCCCTCCTCCCCCTCTATTTTTTGTCCTTG
GAATCCTCTGACTTCAATTGTTATATAATTAATGATTTCAGTACTTCTGA
GGGCCGTGGCTGAAGAATTGGGTTGTTTGTAAATCATTTAGTGAAATATA
TATCAAGCACAGAACGGAGGTGTTACAAAGTTTTGAGGACTTGCAGGACT
CTGTATATTATAATTTTTCCTGGCAGATGATTCTTGAAGAGATTACTTCC
AAGTGTAAGCCCATGTTTCTCTTAAATACATCTAACATTAACTGTTGTAA
TTATATCTGTAGACTGTAGCACTAACAAAAATGTTTTACACCTAAATCTT
TACGTTTAACATAGGCTTATTGAAGAACCACAGATAAACTTCCTTTTAAA
CCTTAATGATTCACTTTTTGAAAAACTCTTTTGAGTTGTGTTTCTTTTCT
TTTTTAGAATTATGTGATGGGTTGGTAATGAAATATTCTGTTATTTGTTT
ACATGATTTGAGATGAGGCTAAAAAGTGTCGTACTTTACCTTAATATTTC
TTTTATGTTCATATTCACGTAAAAGTGGGGATAATGTGAAATCCAATTGC
ATAACCTTTTCTTTCCCAGTGTTGGCATGTGGTTGAGAATAATGAAACCA
CAATGCAAAAATGGGAATGTTTTATTACATAACAGTCAGATACCTATAAA
GTCTGTTAGAGCTTGGAACTGATGTAAAAGTAATCCGAATACCGTGTGAA
GGTTTTATGAATGGGTGCAGGAGATGTGCTATTTGTGGTTATCTATTGTT
TTGCTTTTCCATTGAAATTTTGTGAAGTGCCAAACATCTGTTTTTGGTCT
TTTCATTTTCTAATCTTAAACAATGAAATTGTATTTATGTTATTAACCCA
TCAAACTTGGATCTTGAAAAGTTCTGTACAGTGAAGTCTTTGTGACCTTA
TTGAATACTAGCAGTCTTAAGTTAAGTCGAACTTGTATATTATTAGCTCA
CGGCTCACGCTAAATGTGAATTTTAGGTGATGAATTAGAAGTACAAGTGT
ATGTGTAAGTTGCAAAATATTTTGACCAAACACAAACAGTATGCTAGAAA
TCGTAAGGTGAGTGAGAAACAATATATGTGGTGTGTAAAAATGTGGCGGT
GTTGGATTGTTGAACAGAAGCGTAATAGCATGTAAATACAGACATTTAAT
ATGTGATAAAATTGCATTATATCATGCGACTGGATCATTATTCAAATGGA
ATTAGTAATACAGAGATAGGAAGAATTGAGAAGCTGATTATGAATTTCAA
GAATGTTGATTGGGCAAGAAGCTGATTATTGATCAATTAAAACTAAATCC
TATCTTAAGTAAAACATGCAGCTATTTATTGTTTTTGGTTGATGTTACTT
GTGAATGCGGAACTTGTAAATGGCGCATGTCACTTGCAGAAAACGGGGTC
GGAGCAAAGCTACATTTCACACCATGTTCATATACGCCTTCCATCTTCCG
TCTTGGAATATAGGTGTCTTGGAATATAGGTCGATTCAATTTTTTGCCCA
CATTTTTAAGTATTTTGACTGCATAGTTATAATAATTATTTTTGAATTTT
CTTTTTAATTATAATATTGATCATATATTTTTATTCATAATTTAATTAAA
ATATTGATTATAACTATACGGTCAAAAAACTGAAATATATGTGCCAAATT
CATCAATGAGTATTACCAGTAGAGTAACGGTCCCTAGCATATGATTCTGA
GGAATCTGTTAAATAACACACTAGTTTTTGATCATTGGATGAATATCAAG
CAATTAAGATTATGAAAAAGTTTCTCTCCCTCTATCCCATTTAATTGTAT
ACGTTTCTTTTTAACTGCTCGACACACATTTCAATGCTCTTATAAAATAT
A
Sequence Length:
15001
Sequence Checksum:
772edc92deb3bfc560b47a34223fafc1
View location in JBrowse:
Gene:
LOC108199389
Gene Biotype:
protein_coding
Gbkey:
Gene