Resource Type:
Gene
Organism:
Name:
LOC108202616
Identifier:
LOC108202616
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017371094.1, is a part of gene, LOC108202616. |
| The genetic_marker, MK004088 K1532, is located in gene, LOC108202616. |
| The genetic_marker, MK009923 9_17571206, is located in gene, LOC108202616. |
| The mRNA, XM_017371095.1, is a part of gene, LOC108202616. |
| The mRNA, XM_017371096.1, is a part of gene, LOC108202616. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017371094.1 | XM_017371094.1 | mRNA | DCARv2_Chr9:17556783..17573944 |
| XM_017371095.1 | XM_017371095.1 | mRNA | DCARv2_Chr9:17556783..17573944 |
| XM_017371096.1 | XM_017371096.1 | mRNA | DCARv2_Chr9:17560771..17573944 |
Sequence:
ATTGTTATCAAACCAAACACAGCCCTCTCTTAAAATTACAATCATCATCA
CCCGGGTCGATCATTCTCCAAGTTACCCACAGATTCACGAAGTATTAGAT
ATCAGTGAAACCCATCTAATACATAACTGTTTCCAGTATTATTAACTTGT
ATATATGTATATACATATATGTTTGTAGTTGCAGCCTTGCAGGTGTTATT
GTAAATCAATTATGGAGTTGGATTATGCTATTGAGCTTCAAGACGAAGAT
AGTTTCGGATTTGGTGACAGTAATGTTGTAAGATCACTCCTTTTATGTAT
ATGTACATTTTAAATTAATAGCTGCACAGAAATCTGTTCAAATTATTAAT
TTATTGTGGGTTATTATTTTATCCATCTTTAACTTATTGAGGTTCTACTG
TTTATGTTTTAATTGAAATGGAAGTTAGTTATTTTTTCTTTACCAAGTGG
ATGTGTTGAATACAAGTTTGTGCTGGTATCTTACTTCCTCCGAATATATT
GAAACTGTAATTTCGTTATCTAAAAACAGTTCTGTCGTTAAAATGTGAGT
TATGATTTGTTTAAACAACGGGAAGTAGCAATTTTGATATGTTGTGTTGG
GTGGTAAGGTTTATGATTAATAGAATGTCAAATATATGAATAATGATAGG
ATTTTCAGATTTTGTTTACGGCCTCTGAAGTATTCTTATATTTGAATTTG
TCAAGTTTGGAGGAACTTATAATTTCTACATTCCTCCAGGTTTTATTGTT
GTATGCTGTGTGATATGTACAATGGCATAGAATTGTTTTGGTTTCTTTTT
TGTAATTATTCATGTCATCCGAATCAAATGACCCAGGATAATTCAGCCCT
TGAAGGTGAAAAATGTGGAATATGCATGGATATTGTCATTGATAGGGGAG
TTCTGGATTGCTGTCAACACTGGTATATATTTCTTCCTGATCTCATTTTT
AAGATAACATAGGGTAGGGCTGTAAATGACCCGAGCGGAACCTGAACCCT
AGAGTGCTCGTGTATCATTTGTCAAAAAAGAATCAAACTCGAATTTAAGC
TTCAATTGAATTATATAATTTGTTTGAGTTTGGTTCATTAAGGAAAACTG
TTGCTCACGAATGGTTCACGAACATGTCTCATGAGTTTTCTCACAAGCTT
GTACTCCTAACAAATCATTAATATTGTTCACGAGTTCATGGGTATGTTCA
TGGTTTTAATCTCATAAATAAATTATAAACATTACTTGTGAAATTGGCTT
GCGAACTTTCTTGCACAGACATCATGAACAATGATCATGAGCATCTATGT
TCACTGATTTTCTCGCACATCTTTGAAAAACAATGATCATTTATTTTGAC
GAACAAGTCATGATCAATTCCAGATTGTTTTATATCACTAAGATATTGAT
GACATATATGCAGTTATAATTAAAAATTCAATTTATCTATCCAAACAAAA
TATAATTTGTATCTTATTAATGTAAATAAATTTGAATATTGTAAATATTT
GATTTTAAAATGTACCAGTCGAGATTTTGTAACAATTGGTTTCCAATATT
ATATATGTGTGTTTACAACTGAGTCAATTATTAATTATGATATATGTTAT
AATTATTTAGAATGAAATGCTTCTCATATAACATTTAATATATTATTAAA
TAATGTAGTCTAGCTAATACTGACATTAATTTTTTTTAAATAAATAATTG
GATTGTGGACATATAAAACAAGCTTAATTTTTTATTGAACTTGTTCACGA
ACTACTATCTAATCAATAACGGGAGCATGTTCACGAACTTATTGATCTAA
ATTGTTCATGAACTTGTTCATGAGTCGAACTACACTGTAATCATGTCTGG
CTCATATATAAATCGATCTGTAATATTGTGTTCAAGATCGACTCATTTAT
GAATTGAACCGAACCCGAACCGAGCTTTTTCCTAACCAAAAACCGAGCAG
TTTGTGTTTGTTTTAGCTCATTTACAGCCCTAACATAGGGTGTCTAGTTT
CTCACCTGTGAAAAATGTGGGACTGCAGGTACTGTTTTTCATGCATTGAT
AACTGGGCTACCATTACAAATTTATGTCCACTGTGCCAGAATGAGTTTCA
ACTGATTACTTGTGTGCCTGTAAGTAATAAAACTTATGCAATTTAGCAAA
AAAGGAAAAAAAAAATCACTCAGTCTACTGTACCACATGTTACTTTCTTA
CCTTAAAACCAACTTCATTTGGTGTTCCTCGACAACTTTAATACTATGTC
CTACAACAAGTGTTTGATCTCTCACCCTTTTGCTTTTACTTTGTCTGGCT
TGAAGGTATATGATACCATTGGAAATAACAGCACTGATGAGGACTTGCAA
TCCAGGCATGTGCTATATGTTATTATATTTTGCAAGAATGACTTCCATAT
GCAACTCTTGATACTCAAACGCGCTTTTGTAATATTGAGACAAATAACAA
AATTTACCATCTCGAAGGATAATATGCTAGTTGAAGACTGTAAATTATTT
AGAAATGTATTAGAAGCCGATGGTGACAGGTATGCTGGTATGATAGTTAA
AAATGTGGTGCTGGTGTTTGCTCTAGTCAAGTATCTATAAGGAGGTTATT
TGTGTTTTATTTGCTAGTATATTCTAAACTCGTACATGTTATTTTCTTCA
TGGTAGATTTGGTGGTTGTAATTATGATTAGGTTGGATACCGGATTTTCT
TCAATTGGTTTCAGAATTTAGTGCATATTGCCTATAGATGCTTTCATTCT
TAGTAAATATATTCAAAATGAAAATTCCGGAGGTTGGTGATCTGACATTG
GACGTGATGTGGAAGGAGCTGAAAAATAAATTGTTCTAGTTTTAACTTAT
TGTTATAGATCGAATTGTAACACAATAACAAGTTTATCAATTAAATTAGT
ATAACATCTGAATACATTAGTAGAGGAATTTGATGACTTTAATAATGGAA
CCCAATTTGTAGCCTAATTAAATTGTTGAAGTTCTTTGGGACCCTGTTTA
TTGCCTCACCGTTTATTGAAGTTCACTAGACAGTAAATTCCCACCAAGAA
CTGTGATCTGTATAACGGATTATCATTGCCTAGTTTCAAATCTATTCAAA
TTGTTTATTTGCTTTTGTATCAAATCCCAGTCATCCAGTTGTGAAAAAAC
TCTATTTTTTTTCCACGTGCTGTGAAGATTATGTCTATGTTCAGGAAGTC
AGAGATGTCACATATTATGGGATTTTGCTTATTTACTACTCCCTCCGTCC
CATCCAATTGTTCATGTTTGGAACTGAGGGCTCGACACACATTTTAAGGC
TCATATAAAATATGATTCATAACTTATTTTCAAAATTTTCTTTTTCTGAA
CAAAAGTTTAATCTTTAAATTTTTATTAAGAAAAAGAAAATTCTAGAAAT
AAGTTATGGAACTATACTTTACGTGAGCCCTAAAATGCATGCCAAGCCAT
CAATTTCAAGCGTGAAAAATTGGATGGGACGGAGGGAGTAATTTAGTAGT
GTTTGGCATTTCCATAGAATGGGCTTACATCTCACGAATGTTTAGTCATA
TTTAATGGAAAACATTTAAATGCATATTTGTTTTCCTGAACTGCATTCTG
TAATATATCAAGCAATTACATTTTCTTAAAATGCAGCACCATACGTGGAA
AGAACTTGTTTCTTGTTATATTACCTAGAGCTGACAGTAAAAATTTAAGT
TCTTAAGCTGTATTCTAGTGGCTTCCTAACATGAACTGTGATGTGACTGA
TGTTCGCTTGTTCCTGGACAGCATTCAAATTTGTTCATATTCTCTAATGC
AATTTTTCACTTAGCCCTCGAATTTGATATACATTAAGCTGCTTAATATA
CCTGTTCCTTTTAAGACAAATATAGATTAGAGAGACCTGCGAAGTGAAAT
ATTTATCTTTACGACATCTTTGTTGTCATTTGCTTTTGTTTGTGGTTTAC
ACCTGTTTGTTATGTCAAATGTGCAGAGATGATGACTGGTGCATTGAAGG
AAAAAATAACACTTTATCTTTTCCATCATACTATATTGATGAAAATGTGA
GTACCTTGCAATTTCTACAAAAGTTAGCAAGGCAATCCATATATTTATGT
GAAGTCATGACTATCAAGAAAGGCCTCCTCTTGGGGTCTTATTTACTTGG
TTTATACACAAGTACAAATGTCAAATACTCCTTTTAACTATAAAAAAAAA
GAGCATAAAAGCCTTCTTTGGCCGGGTTGGCAACTAAATGAGAACATGTT
TCAGATTGTGAAGAGAAAAACTAAAGCTTTAACTTTAGGATCACAGAAAA
GGCTCTAGTGTGAGACCTTTGGTGGTCTTAACAGTCCAAGTTGGGGGGAA
AAAATCCTTGTAGCTATAGTGATTCTGAATATTATCATTTATCAGTACTG
AATTCCTTAATTAGCTACCATGTTGGATTTACTGGCATGGTTCTGTTTTG
GAGAGAAGATATAGGGTCAAGTTTCTCTCCAAGCTGTACTCCCATGTTTT
GTCACTGGAAGTGAAGAAAGGAAGGGTGTGAGAGTATCTTTTCTATCTAG
GGGGGAATATTAGTAAATAAAAGAAAGGGAGTCTTAAGTTATAGTTATTT
ACCAAACCCAATCCTTTCTACTGAAAGTTACAAAACCAATTTATATCCCT
TGCTGGATGTGAATGACTGTAATGTGAATGTTTGAGAAAAATTTCTTTTC
TATTGTCACTTGTTGAGGATTACAAAAGAAGAAAAAAAATGCAATACTTC
CTTTTCTTATTGATAAATTGAGAAAGACAAATGAAATTATGTTGATTATT
TTGCTCTCATTACCTTTTTAGTAAATTCTGTAAACTGTCATCTTTTAGGC
AGTTGTCTGTTTGGATGGAGATGGCTGCAAAGTCAGAAGTATGTCAGCAT
CAGTTGAAGAAGGCTTGGATTTCGATACATCAATTGCTTGTGATTCATGT
GATTTATGGTAAATGTCTATCTTTATCTCTTTTAAGTTGCTTCAATAATG
GCCTGCTATGCTGGTTACTCATAGCAACTATTCCCTAATATTTGTGGATT
TTTTAACTTGGTTCCCGCCCTAAAGCTCAGTACGTTCTTTAAAATTTATT
ATCTCAGATAAAATTGGTGGGGAGGGCACTTTGTTGAGCAAAATTGCGAT
ATCAATGTTAACCTGAAAGATATTTGGCATTTATGATACTTCATACGATT
TTATTTTGTAGTCACATTGATAGTGCATATCTGCTACTTAGTCTAATTAT
TGTGACTTCCTGACTAGTAATTAACTGGCTCCTAAGCTATGTAGAACCTA
TTCCCTGTCTTAACAAACAAAAATGAGCGACTAGATGAATTGAGTTTGAA
CATCTTTTCAATTGGCAGAAATTCAGCAGATTCAGATAGACATTGTTTTA
AGATATTTTTTAATTGGACTTTCTGATACTGTTTCGAGTTTCTGACTTGA
TAAACAACCACAAGTAATATACAAGAAATATTATTCAAAACCTCTTCCTC
CTAGTCAGAGTCTGGCTGTTATAAAGCATGTTGTTGAATGCCAACTCACT
TTAGAAATTTTCCTAAAATGTAATATCATCAACACACACACACACATGGT
ATTGTATTTGCATATTATGTATTTGTTAGCACAATATATGTACGTGCCTA
TTATTTTGTTAAAGAGGTACATTAACATCTACTAAATCTTTAATTGTTTG
TACTTTCTTAAAGATACATTAATGGTTTTTTGACCTTGTTGGATTCAGGT
ATCATGCTTTCTGTGTTGGATTTGATACTGAAGGCACATGTGAGAACTCA
TGGTTATGCCCAAGGTAATACTAAGGTATCTGAATATTTAGCACAAATTG
TTTACATGTTGCATGCTCCCAGTTGGGACTCCGATTCAACCAAGTAAGCA
TTGATTCAACCAAGTTAGCAGTTGAGAATAGGAGTTGAAGGAGAAATTGA
TTATAAGGATTAGACAGAGCAAACTTTGATAAATGATAGAGAATTTTAGG
AGAATATCCATTCATCAGTGCATTACTAGGGCACTCAGAATATTAATAAA
GACTTTAGCAATTTCCCCATAACACATTCGCAATACACTTAATTAAATAT
AAGTTCTAAGATAATTCTAATTTCTGATAAAACAAAAAATTTCCAGAAGA
ATCCCCAATATATCTGTTATTGTTGTATAATCTGCATTATCTTCCCCCAT
TACATGAAAAATCGTTCCTCGAGTTTTAGTCATATAACAGGTGACCTGGA
ACGGTGGAAGTTTCACCTTGTAAGCATTATTATTTACTCTCTTCAGTATC
TCGCATGACCCCATTGTTTAAGCATTATTATTTACTCTCTTCAGTATCTC
GCATCTCGCATGACCCCATTGTTTAGGTTTGTCCCCATCATTCCGTCATT
CATTCCATCAAGACATAACAAATTACCCAAAATGCGATTTACCACCTATG
TTTGACCATCTGTTTTATGGTGAGCTCTGATACGCAGTTTAGTTCCAATT
TTCTTTCACAAGGTCCTCCAAAAATGTCGTATAAACTTAGCATCTTGATT
GGACGTTATGGAGCGAGGAACACCATGCAAACAAGATATCTCTTTGAAAT
AAAGTTCGGCAACATGTGAAACATTCATTGCCTTCTGACAATGAACAAAA
TGCGCCATTTTTGATAATCGATCAACCACTACTATGATAGAATTTGTTCA
TTTTTATGTACCCCCTCTTTGATCTTTGAAAAACATCACCCCTTTCAACA
TGCCAAGTGACGTTCCTTTTTTAATTTTGGCCAAAAATACTTGCTTTGGA
TTATTGAAATTGTTTTGACTTGCTCGAAGTGACCTAAAGAATTGTTGTAG
CCACTAATTTTTCTCATCAAGAATACAAAGTTGTAATCCTTTGAAAAGAA
AACCACCTTGATCTTGGTAATTAGGATACTCAATTTGAAGTATTGCTTGA
AGATCCGACCCAAAGAACTTGTGTTGAACCTTGCAATCTCAACTCTCATT
ACGTTAGGAATGAAGACTTCATGTTTAAAGCATTTGTGACTTTGTTTTGA
ATGTCAGCTTTATACTTGATAGTGAAAGTGAACCATTGTAAGAAGTTGAC
CCACTTGGCATGCCTTCGACTTATATGTTGTTGGCTCTACATGAATTTCA
AGGCTTCATGATCCAAGTAAGGATGAATTAAGTTTAAGTGCAGAAAAAAC
AACATAGAACTCTATGTTGAATATTGGCAGCGTGAGCGATTAAGTTTTTC
GCTGTAAATTGTAAAAAGCAATAGGACGACCTTCTTGACTTAGGATAGAA
TGTATCGCAATCCACCTCAAAGACCTTATCAAAGTTGGATCTTCTTGACT
TAGGATAGCCCCTATGCCCACCTTTGATGTATCGCAAATTCGCAATCCAC
CTCAAAGACCTTGTCAGAGTTGGATGTTGATGCACTTCTCATCAACTTAC
AACCTTTTGGATCCTTTTTTTATATGGGGACTTCTCTACATATGAGGTAC
TTCTCACCAATAATTCTATTATTAAATTTCTCCCATGGCCACATGTGCCA
TGGTTTCCTCGACACATCTGCCGTGTGCCTATGTTTTTTCTTTCCTCCTA
GAACCTCTCCGTGTTCACCCCCTGAGAAGCTTTATCATCACTGTCAGAAA
CTTTGGTGGCAAGAAGCGTCTTTGTTTTTTGTTGTACTCATCATGAGCAG
CTTATTAGTAATGCCCTGTTTAACTACCACATGTAGTTCTTTTGTGAAGG
ATCATTGGAAAAAATTGATGTGCAGAAAGAATTCTATGTTATATATATTT
TAACACATGAACTTGCTTTTTTGTATGCTTAAAACAATTGATAACCTATT
CCTATCCTACTAGCAAGTAATAATAATTTTAAATAATTTAAAAACAATTC
AAATACTATTAAATTATTTACAACAAGAAAGAATCCAATTTGTGAAATTT
GTGTATCTCGTGAATTGTTCGAGTTCGAGGTGTGACTTTAGTCTGATCCA
GCTTAATTCCTTTATCATATATGATGTACCCTGGAAACAACACACTATGC
TCCCTAAAATTACACTTTTTCAACTTTTCTTGTCTCAACTGTTGAACACC
TCTTTAAGATCTTGTTTGTGAGCGTCAAGGGAGGGGTTGTAAATTAAGAT
TATAACACATCTTTTGTGAAATGGTTTTGAGACAAGATTAATGACACCCA
TAAATGTACTACGTGTGTTGGATAAATCGAATGGCATCAAACTACTCGTA
CAGCCCATCTTATGTTTTAAATGCAATTTTCCACTCATCTCCCAACTTAT
GCAAATCTGTTGATAATTGCTGCGAAGATCAATCTTCGAAAATATCTTCG
CCCCAATTAGCTGGTCCAATAAACCCTCACCCCGTGGAATCGGATATTGA
TACTTAAGTTTTCTTGTTAATTGGACGGCTGTCCATGCACATGCGTGTCC
GTCACATGTCATCTTTCTTTGGAGTTAACTTTCTCTATGTGATTTGTGTT
GGACACCATGTTTGCGCCATCATTTTTATCTCCTTTGGTAGAAGCTTGTT
CTTTCATTGGTGCTAAGATACGCTTCAAATTATCCTTCCAGAATGTACAA
GTAATATGAATGCATTGTGGTCATATTGCCATGGCATACCAAGGAGTATG
TGACTGGCATCCATCTTGACTACACACCAAACATTATCAAAGTATTTAGG
TCTAATTGACAATGAGGCGATGAGTACTAATAGAATCCTCGTTTCCCTTG
AACAATGATAATTTGTATGGTTTTGGATGCTTTTCTTGTTTTAACTGCAT
TTTATCAACTGCTTCACGATAAATGACATTCTTGCAACTGTCACTTTCAG
CGATTAACTTTCATATCTTACCTTCAATAGTGCACGTAGTGTGTAAGAAG
TTAGGCAGCCAGTTTTCTTTCGGCAGCAACAAGGCTTTGCGTATTACTCT
GGACTCCCCAACCTCTTTATACAAATTATTTTCTTTCGGCTCACTGTCAT
ACAACGGTTCTTCCTCTTATTCAGAGCTGACTATGTTTTCCACCACTAAT
CATGAGTTGTTTTCCTCGTTCTCGCCTTCAAGCTGCTGAAGTATGCCTGG
TTTTTATCATTTTAAAGCAATTAATCAAGTTCCTTTGCTCTTGTTTTCCG
TGGTATTAGATTTAGAAGTATTCTTTCGTGGCATAGTTGTGTCTTGAGAA
CCTCTAGCCTGATTGTCAGTGTTTAAATGCTGGTTGGCATTCATGTCTTG
GTTCTTAATAGTACAAAATTTAGACTTATCCACCCTGGTTTGGCATTTTT
CAACAGCCAAAGCTGTTTGGTAAGCTTCTGAAACTGACCAACTGTATGAA
GGTGTAGTGCTTCCTGAATATTCAAATGCATTCCTCCCCGATATCGCGAC
CAGCTGTTCTTCACTTTCAGATAATTCATTTCGAGATACTAGCTGAGACC
TCTTCAGTATTATCATCAGCAGACCTGCCACGACGCAAATTTGCATAAAA
AAGGGCCCAAATAACACAATTTTGGAGTTTAATGCCCTGAATAACAAATT
TTGTAAAAATGGCCCTCAAATGATATATAAAGACGTTTTACAAATAGCGT
TTTATATATAAGGAGGAACGCTAAAACGCTAATGCGTTTAGCGTTTACAA
CTTTTAGACCCCAAGCCCAAGGCTATCTACTTTTGTTTCTTTTTTCTTTT
TTAAAAATAATTTTGGTAACCCTTAATAAAGTAATAATTGGAACGTAAAT
TAACGGTCGTTAATATTTTAGGTTTCATATTTGAGTTTTAGCATGGTTAA
TTTATACTTTAAATTAAATGGACCGACGGTTAGGGTTTAGGAGTGAGGAT
TTAGGGCCTTTAGGCCCTAAACACTCGAGCCTAAACCTTAATTAATTCGA
GGTTTTAGGGCCGAAGGCCCGAAAGCTGAGAAACCAGTTTAAAAAAGTAA
ATTAACAGTTGTTAACATTGAGGGTTTATGTTTGGGTTTTAGAATAATTA
ATTTATTAATTTATACTTTAAATTAAATCGGCTGACGATTAGGGTTTAGG
ATCGAGGGTTTAGGGCCTTTAAGCCCTAAACACTCGAGCCTAAACCCTAA
TTAATTCGAGGCTTTAGGGCCGAAGGCACGAAAGACGAGAAACCAGTTTA
AAAAATTAAATTAAACAAAATAAAAAATATCACAACATAGAGACGCTAAA
CCAAGTAGCGTTTTAGTTAGAAACAAATGATCCAAAACGCCATATTAAAT
AGCGTTTTCAGTTTGTTTGGAGGTGAGGTGTCACATGAGCACAAGCATTG
GATGTATTAACAGATGCATAAACGCTACTGCAAGCAGCGTTTGTTGTTTT
TAAAAATAAAATAAAAACCTTAAACGCTACACGATTTAGGGTTTTGTTTT
TTTAACTTAAACGCTTCACGGTGAGCGTCACTAAATGGTAACCATGGCCA
TATGTCCGGTATGTTGATAGTTGGGGCATTAAGCCCCCAAATTTGGATAT
TCAGGGCTAACACCCTTTTTTGGAAGCCGCCGACACATAGTTTGCACATA
TTTGTTGGCAGATAATTTTCTTTTAACTTCTTTTTCCTCCCAGACAGTGG
TTTTACTTTCCCCCTGTATTTTCCTCTTTAATCTCAGATGTTCCCACCAA
GCAAAAGCTCTTCCTTTCACTTTGAGGGCTACTAATTTCACCTTCATGTT
GTCCGCGACTTCTTTAAACTCAAATATTCTCCCACAGTGTGTAGTCAATT
CGCAAATTCTTCAGCTTTTAAACTTCCAAACTCTGGATCCTTTGATTTTA
TCGAACTGGTGCTTCATGTCGAGGATTTCGATTGTAAAATAAATTGTTAA
ATGTACTCTCTAGACTCAGATTCTTCGTTCTTCATCATCATCGTTGGATG
ATTCCAATTGAGCCAGGTTTACGATCTCCACCTACCTCCATTATCTCAAC
TTAAGCAGAATCCTAATGAATCAAATTAACTCTGACCAGCTGATGCCTCC
AAGTAATTAGTAGAGAATAGGAATTGAAAGAGAAACTGATTACAAGGAAA
TATTTAATGAATAGTTCCTTGGCAAATTAAGAGGCTGGGATATAAATAGT
TTCCAGCAGTGACTTTGATTATTAATTAAGACTCTAGAAATTCCCGTAAG
ACCTTCCCAATACACTTTATTTAATTATAACTTGTGGTACTTTATATATT
AATTAACACTTTATCAATTCCCATAATACCTTCCCTATACTCTTTATTGA
ATTATAAGCTCCGGATAAATCTGACTTCTGATAAAACTAAAAGTTTCCAG
AAGAATTTCGAAATTCTGTTATTGTTATAGAATATGCATCCCGACTCCTT
TCCAATATTACACTAGTTTCAGGTTCAGTTTCGTAATCTACCCTACTTTA
TGCAATCATTACCAAATTACCCTACCTTATTTTTTAAACACACGTCATCT
CATTTTCCAAGTATTAATTATATTTTTTCTGTAATAATTTCACTTTAGTC
ATTCTTTTAAGTTTAATTTCTGTATTTGACATAAGTTTACCTTTCTTATT
CTAAATTATTTAATATATTATAATTTAATAAATTATATATTTAGCTGCAT
TGTTAATTTGATATTATAAAAATTAATTTGTGGGCAACTCACTAAGGATC
CTTCTCAGGTGGGAGATGTGTCTAAGAAGGCCATACTAAATGCAGCCAAC
AATGTCCTCAACAAAATTGCTAATAATTGTTGAATGAGATAATCGTACTA
AATTATTAAGTCGCTTTAAGTTAATTGATAAGTGGGTGATCCCCTTTCTC
GGTTCAGATTTATTTCATTCTTAAATCCATTTTTTAACTGTCAGCACTGT
CAGCACTGTAGCTCTGAACTGTTTCTTATCTCACACACTACAACGATGCA
GGTGTACGGTGCAACATAGGTCAGATGAACTTTTATTGGGTCGGCCAAGC
AACCAATGTGCTTCAGAAAATTCTAGCGATCAATGTCCTGTTGACCCTGG
TTTGTCAGGAAAATTAGTAGTATCTGTTGCTGATGCTGGAGAAACAGCTT
TGGTTGTGTCGATGCTTGAAGGGAAGCAAGAAACTAAGAGAAAGTTTCAA
ACCATGTCCAGTGTAGAAATGTGCGAGATGAAAGAACCATGGCAACTGTC
AGATTCTGTGGCTGAGGCTGGAAGGAAGTCTGGTACAGTAGCAGTTGAAA
AAACTGAAGAACAAGAAATGACAAAAGTCTTCCCAAGTTCTAATATACCC
GAGGATGTGAAAATGCATGCATCTCTTCCTAGTTCTTTCTTTAACAAGCA
GTTGTCGGAAACAACCATGTCTTTGAAAATGTGCGAGATAAAAGCACCAA
CTCAAGTGTCAGATTCTGTTGCTGATGCTGGAAGGAAATCTGCTACAGTA
GCAGTTGAAGAAACTGAAGAACAAGAAAGGACTAAGGTCTTTGCAAGTTC
AAATATACCGGAGGATGTGAAAATGCATTCATCTCTTTCTAGTTCTTTGG
TTAACGAGCAGAAGTTGGAAACACCATTAGAGAACAGGCATAGTGTTGGA
CCAAATTCAGTGGCGGAGGTACATAAATTGGCTGTATTACAAGAGTCATC
AGGCATGTTACCTTCAATTTCTGGATCTGCTTTTGGTGATGAAGGAATGA
GTGCACTACCTAATGGATCTGTAACTTCTATAAGCAAGTTACTAGATCAA
CATTGCAGTAAAGCAACTCCTAGATCTGGTATGAATCTTTATGTTGGTTT
ATCTGTGAGCTCTTATTTGTTTTGTTAGGAAAAGTTTGCAGTATTTTCAA
ATTCATGTTGATAGATTATTGAAAGTTCTGCATTTGCGCCCTCTCTTACT
AATCGTTGTTGCTAAAGCTGACAACCAAGTGGGTATAGGTGACACTGTTA
AAGAATGCCCACTTCAAGGTACATTTAAGCCATGCATGACTAGATAAACA
CCAGAACTAGTCAATGTTTATAAAGCACTTCCATACTATTTTAAATTTGA
TTGTTATTTTATTAGGTGCTTATTGCGCCCATTTGAAATGCTTTCAGCGG
ATGAGACCATGAAGAAGGATGCTAATGGAAGTCTTGGTACAAAGAGAAAG
AATAGAGATTGGAGGTAATTTGCTTATTAACTACCTCTGGACTTTCATGT
ATCAATCAACTATATACTTGCATCTGATTTAAAACCTTAAGGTGTTAGGA
GGGCTTATGTAGATCATAGTTTATCACTTTATCTCGAACAAGATTAAATG
GTATTTAATGCACGAAGAAATATTAGCTGCAGTTGCTATGATCTTTAGTA
TATTTTTCTCTTCGGTCTTATGAGTTTCTTGATTATACTGCAACTTCAAT
GTGGCTGCGCTTACAGAGGTACCGAAGAAGTTAAAGCTAAAACGGCAAAA
AAGAAAGTCAATGCTGAGGGGAGCATGCAACAGATTCATGCAAACGATCA
TGCTGATGAGTGTGTTAAAAAAAACACTCCAAAGGCATCTGGTGTTACTG
TTTCGCAAAATAAAAAAATAATAGCAAATTCTACCATGCAGACAGCAACT
ACTAGCATAATGGACATAGTTCGCGAGACGGATCGACTTGCAGAGACTTC
CTCTAGGAGCCGAGAAAATGCAGCTGGCTTGAGGGTAAAAAAAATATTGA
GGCGACCTACTGAGGACAAGGAGTCTTCTATCTTAGTTCAAAAGCTAAGA
AAAGAAATCAGAGATGCTGTCCGAAACAAAACATCCAAAGAGCTTGGAGA
CAACCATTTTGATCCAAAACTTTTAACGGCTTTTCGGGCTGCTGTGGTTG
GACAGGTGCCTGAATCAAAAAATTCTTTGCCTGTGGATATGAAGGCCAAA
AAGTCACTACTTCAAAAGGGAAAAATACGTGAAAATTTAACCAAAAAAAT
ATATGGTATGGGGGGGAGGAGGCGTAGGGCTTGGACCCGAGATTGTGACA
TTGAATTTTGGAAGTATCGGTGCTCAAAAATTTCGAAGCCTGAAAAAATT
GAGACGTTGAAATCTGTCCTCAACCTGTTAAGGAAGAGTCCAGAGAGAAC
AGAAATCAAACATAAAAATGAAAGTGCTGGTTCAAGTTCTATCCTATCAC
GATTATATTTAGCTGATTCATCTCTATTTCCTCGGAAGGAGGACATCAAA
CCTGTGTCAACACTGAAAGCTGCTGCTATTGCTGCACAGAATAAAAATGT
TAGATCTACAGAAAATCCTCTGACTTCGGGTTACGGAAACAACTGTTTGG
AAACTCTGGTTACAGAAGTTAGTGCCTCACAGATGAAAGTTCCTCCGCCT
AATATTGCAGCTACTACATCTATTGTTCCAACTTTGAAAGGTGAAGTTCC
TTCCCATAAATCAAAGTCAAATAGATGTACAGTTGGGTCATCGATTCCTA
CAATAGCTGCTTCCCAATCCCAGAAGGATCCAAATGGAAAACATGATATG
CATACTGACAAAAGAAAATGGGCCCAGCAGTTTCTTGCACGGAAAGCTGC
AGTAGCAGGAAATAATGCATTACAAGAACAAGATGACACTGCTGTGCTCA
AAGGACAGCACCCTTTATTAGTATGTCAATTTTTATATACTCTTTCTTAC
AGTCCACTTATCTATGCAACCTTTCTTATTGTTTTATGATGATTTGATCA
GGCTCAGTTACCAAGAGATATGCGGCCAGTATTGGCAGTCAGTCGTCATA
ATAAAATTCCCCTATCAATTAGGCAGGTAATAGTTAAACTCTTTGAGAAT
TGTAGGACAGGCCTTGTCCTTCAGAATGATATATTCAACCATCAGATTTC
TATGTGTTTCTGTGATGAGGAGTAGCCTGAGGAAATAGTAATGACCTCTC
AAATTTATTAATCACGATAGAAATGTAGTCCAAGTATATGCACTTATGTG
GAAGAATATATTGTCTTTATCCATGTCTTAAATTAGATAATTGTTTGGAT
TCCTTAAAAATATAATTTGTTACATCTAAAATAAGTTGGTGACAAGGTCC
TTGGTCTGTTAATCACAAGTCAGAGAATGGCAGGAAAGTAGCTTATAATT
TCTGTGTTTTCACTCGTTCAATAATTTCCTTGCTCTCTTCTCTCTTCTTT
GCTTCCGCCATCCACTTTGCTACCACGTGGACTATCAGCAAAAGTATTAC
TATATAATATAATCACCCATACTAGTCCTTTCATTTTACTCGAGTCAATT
GTCAAGTTGTCAGTATTCTTCTTGCTTCTCTATTTCTCCACCGAACACCA
CCTTGAACCTATACATCCTTATTGTTATTTATTGCAATAAAAGTTGTTTT
TTCCATATAGACAAATCAATTCATGCTCCAGGAAGAAATTTAAAATACTT
TCCTCATGTGAGCAAACTTGAAGAGTAGTAGCATATCTGTCTTCGACCTT
GTAATATCATGGACTGTTATCATGAATATTAGCAAGTGTGTATCATTAAT
TTTATGAAATTCATATAGGCTGCATATGACTTGCTGGACCTCTGTCATGC
AGGCTCAACTTTACCGCCTAACCGAACACTTTCTAAGAAAAACAAATATG
CCAGTCAATCGCAGAACTGCCCAAATCGAGTTGGCTGTGGCAGATGCAGT
TAATATCGAAAAAGAGGTTGCTAACAGGTCAAACAGCAAGCTAGTATATG
TAAATCTATGTTCCCAGGAGTTGTTACATAGATCTGAGAGTACTTTGTCT
AGTAAAGCAATGGAGTCTATCTCTAATCCAGTTCCAGAAATTTCTGCTGA
TAGATTGGTGAAATCTACCATTGATTGTTCAACCAGCTTGGCTGTTGACG
AGGCATTAAGAAATGCAGGGCTTCTATCCGATTCCCCACCAAGTAGTCCA
CATCGTCAATTAGAGGAAATAGAGAAAGCTGATGATTCAAAAAGGTTTGT
ACACGAGGGACCTGATAGTGTATTTGAAATTGATTCTGAACCTGAACTGG
ATATATATGGTGATTTTGAGTATGATTTGCAAGATGAAGACTTCATTGGT
GCTAGTACATTAAAAGGATCTGAGTCGCAAGCAGAAGAACCGAAATTGAA
AGTGGTTTTCTCCACTATTGACTCTGACCGACCAAATGATACTGTGAAAT
TGGATAATATAGAAAAGCCAGTAATTGCTGGGGAACCTGATAATTCTTCC
AATTGTATTGACAGCCGAGCTGATACAACAAGCACTGGGAGTTTAATTAT
TAGTGGTAAGGCGGACAGGTCTGATCCTCAGAGTTCTTTACTTGATGAAG
GTGAAGAGCTTTCTCTTGCAGAATGTGAAGAGTTATATGGCCCGGACAGA
GAACCTTTAATCACAAAGTTTCCTGAAAGTGTCTGTATGAAGCCTTATGA
TTTAACAGCCACAAACTTGGTCCCTGATAATAATAAAGACAATCTATCGA
GTCAAACTCTTGAAGCATCTGACGAGAAAAAGGCTTTGGCGAGAAACCAG
GCACTGACCGCTGTTGTTGGCGATGTAGAATATGAGTCCAAGCAATCCCG
AGAATGCGTAATTATAAAGGAGAAAACAGATAGCAGAAAGCAGCAAGATG
GCTGCAATTCTGTTCATAAGAAGGTACTAAACAAGCTAGTGTGCAAGATC
ATGAACTACTCTTTACAAATTATTGTTTCTTTGGAGGTGCCTGAGCTTTT
GTTGTGTGTTCGGAAGCTGTACATTTTGTGCATCTGACACTGTATATCTT
TTTGGCTATAGGTAGAAGCTTATATAAAAGAGCACATCAGACCTCTCTGC
AAAAGTGGTGTAATCAATGTTGAACAGTACCGATGGGCTGTCGGGAAGAC
AACTGAAAAAATTATGAAGTATCACCACAAAGACAAAAATGCAAATTTTC
TTATCAAGGAAGGTGAGAAAGTGAAGAAACTTGCAGAGCAGTACGTCGAA
GCTGCCCAAACCCAGAGAGGATAATGAAATAATCAAGCAGTCACGGTTTG
GAAATAGTCTGGCTTTCAATTTCTATTCTTCAAGTTGATGACTTCAACAA
ACTTCGAAGGTGTATAATTTAAGTCCTATGTATTCTGTAATTATATTTAC
AGCAGAAAAATATATACCTGGCCTTGTAAATTTAGGACGGAAGTTATAAC
TCTTGAAATTAAGTTTGAAAGTAACCGGAGTAACACTTTAAGAAATCACT
GGTTTTGATTA
Sequence Length:
17161
Sequence Checksum:
54c7279ba2a0c8612c45392ddcf98450
View location in JBrowse:
Gene:
LOC108202616
Gene Biotype:
protein_coding
Gbkey:
Gene