DCAR_018288 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_018288

Identifier:

DCAR_018288.gene

Locus Tag:

DCAR_018288

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 2 relationships.
Relationships
The mRNA, DCAR_018288, is a part of gene, DCAR_018288.
The genetic_marker, MK002224 ESSR-119, is located in gene, DCAR_018288.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_018288	DCAR_018288.mRNA	mRNA	DCARv2_Chr5:28216381..28224534

Sequence:

ATGATGTTCCTTATCTGTGGATTCTTCACGCTGCAGGTTATGGAGTGGAT
GAATAAGAGCGGCAATGGTTTTGCTCCCACTGACACTGCAAAGTATCTGG
ATCTGACAGCAAAAGTCAAGGGTATATCTGCTGCTGAATATTATTTCAAT
GGCCTCCTCCCGTCAGAAATTCATAAATGTGCATATGGAGCTCTGCTTAA
CTGTTTTTGCCAAGGAGGACTGGAAGATAAGGCACATGCTCTGTTTGTGG
AGATGGATAAGATGGGTATTGTTTCCACGATTGCTTTCAACAATCTTATG
ACCTTGTATATGAAGATACACCAGCCAGAGAAGGTGCCCGCTTTAATTCA
AGAGTTGAAGAACAGGAACATGCCACTGGACATGTTCTCCTATAGTGTTT
GGATGGGTAGCTACTCATCTTTAAATGATATTAAAGCCGTGGAAAGGGTG
TTCGAGGAGGTAAACCTAATATATGGAAAACAGAACTACGATTGGACAAT
AATAAGTAACCTGGCTTCAGCTTATGTCAATGTTGGACTTGATGAAAAAG
CTGAATTAACTCTTAAAGAATTGGAAAAAAAGGTATTAAATGTGAAGCGA
CCTGATCGTAGACCATTCCATTACCTATTAAACTTGTATGCTGCAACTTC
AAATCTTGCCGAGGTCCATAGAATTTGGAAGGGGCTAAAGTCTGCATTTA
AAGTAACCACCAATGTTAGTACTCTTCATATGCTTAAAGCTCTTGCAAAA
TTAGATGATGTTATTGGGTTGAAGAGTATCTTTGAGGAGTGGGAGTCAAC
TTGTCCGAGTTATGATGAAAGGCTAGCAAAAACGGCAATAGTCCTTTACT
TAAAGCATGACATGACTGAAGAAGCTGGAAGGGTGTTTGAGCATGTTGTG
AAGAGGTGTGAAGGACCTTACTATCGATACTGGGAAATGTTAATGTCATA
CTATTTGGAGAAACATGAAATAGATACAGCTTTAGAATGCCTCGAAGCAG
CTATATCAGAAGGTAAGAACAATGAATGGCATCCGACCCCTGAAGATGTT
AACCGATTTATGGAGTACTTCAAGAAAGATAATGATGCAAACGGTGCTGA
AATGTTCTGCAAGATTTTGAGGAAATTACAACCTCTCGATCATGGGACAT
ACACATCATTGTTGGAGATTTATGCAGGTGCCAGTCAGATTGTAAGATAG
CATCGGAGATGCGTAGTAGTACAGATGATGGGATTGAAATTAGCTTAGAA
CTTGAGTACCGACTCAAAAAGGTTTTACCTTGAATAGATTGTTTCTTCAC
TGTTGAGGTGATGCCAGACTTGCTAGTTTTTAAAACATTTTCTAGTTGCA
GGGGAGAGTCTGTATTGATCATATTGATCATCGACTTTGCTAAGAGCAAA
TAAGTGTATATTTGTAATATGGATTTTAATTATTTTTTTTTGTTCACTAT
TGTGCTAGTTAAAGATTAGCATGAGAAAGAAAGTTGATCTGTCATCCTCC
TTCCTTACAGTTGCATCCTAAACTAGGAGCCACATTTCCATCCAAATTGC
AAAACTTTAATAACTTTGTTGAGATTAAATTGAGTTGTGGTATCTCTCTG
GCAATCTGAATACAAAATTAAGATGCAAATGTGATGAGATGATCCGCTGG
TAAAATTGTTTGACGTTGTCTATGCTATAATTATAGGATGTTTTTGGTGT
TAAAATCGATTTTGGCTCGTTTAATCGAAAAATGATTTTCCACATATTTT
CGGAGCTGCATTCGATTCTCGCTCAATCAAGAATTATCAATTCTCTTGCT
ACAAGTAGCACATATGTAATTTTTAATAATATTGATCTAATTAAAAAAAC
TGAATTTTTCCGATGCCGGATTAATTTTAAAATTCTTAACATATAATAAT
GCTTATTTATCATTTTTCCAGTAGAATGCGGCTCCTATTTGTAAAATCCT
TTGAGTTAGGGTAGTTTCGTTTTTGTTGTGCAAAACCCTAGAACATGAAT
TAGGCAATAGCAAGTAGAAATTTTAATCATTTAGCAAAAAAAAAAAAGTA
GAAATTTTAATCGAGAACGATGATGAAGGTGTTATTCAATCCTAGCCGTC
TATTCTCAGCTACACCATCGTCGCTGGTAAGATACGTGTGTACGGCGGTG
AAAATGGAACATGACGCGGCGGCGGCGGCGGCGACCGTTCAGAAGGTAGT
TAAACTGAAGAGAGATGTTCTGTACCTTCAATTATCAGCTCCAGATTCAT
CGAAAGCTTCGACTTTGGATACTTTAAATCTATTTTTTCCGGAAAAAGAC
GATTTCACAAGCAAATTTCAGCTGAATTCTTGTATATTGCAACTCCGAAG
AAGTGGAAAAGTACTCCGAGCCCTGCAGGTTCTTACATTTTCCTTGTGAT
ATTTATTAATTTTGCGTATTGCCTTGCCATTGTTGCACAGGTCAACAATT
GTTCTGCACTCTTAAAAATTCACTAAACTGTTCTCGACCCTATAAATGTG
AGGGTTTATTAATTGGAAATATGAAAGTAGATGGAGGAGTGGACTTTAAT
TTAATTAATAGAATGAATAACTTCGAATTCATAGTTGTAGTGTTTATAAA
TACAGAAGGTTGAATCTTAATCACATTGGGCTTGTTTGAGTCTATCGTGT
TATCTTAGTAAGAGAAGAGTGCTATACAATTTTTTTAAGGATAATTTGTC
CTCCTCTCAAGAATATTGTAGAATTGGTATTTAAATCTCTGAAGTTCATA
TGCACCATTTTTTACTTTAGCTCCCCACTACCTGCGTTGTTGAGCCATAC
TTTTCTCGTGTAGGGCGCATGTACGGTCGCATACCATCATGTCGCAGAAA
GTAAAATCAAACTATGCATAGCTAATGGAGTGCACACAATGTGCAGAGAA
AGTGATATACAACCTTAACTCCTAGTAATAAATAAACAGGCTGCTTCTGC
GAGTAACCTCAGCCTGGGTTTAAAAAAATCCTGTAAAAGTTTGAAAATGT
TTAGACTCTTGCTTTTTATAATGTTGAGAAACTGCAAAATGCATTCAAAA
GGTAAAACAGTATGTCGGGCAATGAAAAAGTATTGAAATAGAATATAAGC
TTAAGCTTGACTAATAGGACCACTATATCTTGATCTTTTTTTCTTTCTTT
TTTTTGGGGGTGGCGAGCNTGAGCCATACTTTTCCCGTGTAGGGCGCATG
TACGGTCGCATACCATCATGTCGCAGAAAGTAAAATCAAACTATGCATAG
CTAATGGAGTGCACACAATGTGCAGAGAAAGTGATATACAACCTTAACTC
CTAGTAATAAATAAACAGGCTGCTTCTGCGAGTAACCTCAGCCTGGGTTT
AAAAAAATCCTGTAAAAGTTTGAAAATGTTTAGACTCTTGCTTTTTATAA
TGTTGAGAAACTGCAAAATGCATTCAAAAGGTAAAACAGTATGTCGGGCA
ATGAAAAAGTATTGAAATAGAATATAAGCTTAAGCTTGACTAATAGGACC
ACTATATCTTGATCTTTTTTTCTTTCTTTTTTTTGGGGGTGGCGAGCTTT
GTGTATTACCCAAGTTGGATGCAGTAGTGGAAAAAGTGGAAATGGGTGAT
TCAGGATAGGCCTGACATTTCTCTCTAGGCTTTAATTTGACTCGGTTTGT
CACATTGATGTAGAAAATTCTCCTTGTTAGTAGGGTTTTTTTCCCGTATA
TACATATGATTATATCCACTGATGTTCTGATCTATGTGACACAGGTAATG
GAGTGGATGCACACTAGAAATATTAAATTTGAACCTACTGATCATGCAAG
ACAGTTGGATCTGATATCACAGGTCAAGGGAATCTCTGCTGCTGAGAATC
ATTTTAACGGTATCCCAGAAATAGCGAAGGATATATCTACTTATGGTGCT
CTACTTAACTGCTATTGCAGAGAAAAATTGACTGACAAGGCACTGAATTT
ATTTGAGAAGATGGATACAATGCAGTTTCTTTCTTCAGTTGCTTTCAACA
ATCTTATGTCCTTGTATATGAGACTAAATATGCCAGAGAAAGTGCCTCCA
TTAGTCCAGGAGATGAAGAACAGAAACATAGCACTGAGCGTACATACGTA
TAACATCTGGATCACTAGTTATACTTGTTTGAAAGATATTGAGGCAGCGG
AAAAGGTTTTTGAGGAGATAACACACAATAATGGAGCGGTGCAGCATGAT
TGGACAACATTTAGTAACTTGGCAGTAGCTTATGTTAAGGCTGGACTTTA
TGAGAAAGCTGAATCAACCCTTGAAAAAATGGAGGAAGAAATTAGGAAGA
TGGGGAAACGATGTGGCCGTAAACCATTTCATTACCTGTTAAGCTTGTAT
GCTGGAACCTCTAATCTAGATAAGGTCCATAAAATCTGGAAGCACCTCAA
GTCAGCATTTAAAATGGATTCCGATAAGAGTACTCTGGCAATGCTCGAGA
CACTTGCCAGATTGGACGACGTTAATGGCTTTAAGAAGATCTTTGAGGAG
TGGGAATCAACTTGTTCTACTTATGATAGAAGGCTGCCATATCACGCTAT
TGGTTTCTACCTCAAGCATGGCATGATCGAAGAAGCTGAAATGGTTTTCC
ACAACATCTTAAAGAGGTACAACGGAAATACTCATTGGTTTTGGAAACGA
GTAATGCAGCATTATCTGGAGAAACAACAGTTAGATTTTGCTTTGAGTTG
CCTAGAAACAGCCATATCTGTAGTCAAGAACAACGAGTTGCATCCAACCC
CTGAAGATGTTAATAGACTCATGGAGTATTTTAAGAAGGAGGGTGATGTC
AATAAAGCTGAAAAGTTTTGCAAGATCTTGAAGAAGGTAAACCTTCTGGA
TTCTGAAGCCTACAAATTATTGCTGGAGACTTATGTAGCTGCCAGTAAAG
AGGCACCCGATATGCGCAATAGGATTATGGATGATGGAATCGAAGCTAGT
CCCGAACTTGAAGAGTTGCTTGGAAGAGTGTGTAGTGAGCAGTCTGCTAA
AAAGCGCATTAAGCAGCCGCCAACAAAGAATCGGAAACACTTCGATTTTG
TATTAAACAGTGATTAAGCGGTCAGTTAGTTCTGAACTCGAGGTTTACGA
ATTACCAACGTCATCCTGAACATTTCCTAGGACTGCATGGCTACGTTTTT
ATGAAAAATGACTGCCAAAATTATTCTGTAAAAAATATTCAAAAATACAA
CTTTACAAAATTTATCGTACACTAAGCCGGTTGTTTTCATGAAAACAACC
TCTCTATTAAGAGTATAGGCAGAGCTGCGTATATTTTATCCTCCTCAAAC
TTATAAGTATGGTATGGTATTTAATAAAATAAAAATGAAAACGACAATCA
ACAACCATTATCCAAAAACAAAAGCAAGCAGTCCCCATTAGGGTTTATGG
ATGAACAAAGAACTTGATTGCTGTTACATTGTCTTTGAAATCTTATTTTT
GCTGAAAAGTATATTTCCTAATTTTGTGACTAAAAAAATCCTTAATTTAC
ACAATTTAGCAATTTTCATTATATATTAATATTAATAATCAAGTTAGAAA
CAAAAGAGAAAGAGTATTAAACTTACATTTATTCCAATTAATTTAATTTA
TATATTAATAATTAAAATATCAAAATAATGCAAGTATTAATATTTTTCAT
TTCGTTTGTAAAACCCTAGACTACCATTTTAGCCAAAGCGTGAAATGCGA
AAATGATGAAGTTATTGTTAAATCTTAGACGGCGTCGTTTTCCATCGTCT
TCTCCGCCGACTAGATATTTGTGTACGGCGGTTACAGAGAAACAACCCGC
GGCTCCGGCGAGGTCTAAAAAATCCGGTAGAGAAAGAAGTGATGGACTAT
ATAATAGATTATCGGCGTTAGGAAGAAGCGGAGGCTCGGCGATAGATACG
TTGAATAAGTATTTCAGTGAAGGTAATTACGCTCGGAAATATGAACTTGA
TACTTGTATTTGGCAGCTCCGTAGATTCGGTAAAGCCGACCACGCTCTCC
AGGTTTGTGCTCTACGCAATTTGTGCTCTTATATATTCCCCCATCCCACT
TATTTCTTCTTCTTTTTTTTTATTACGATTTTTTTCAACGCATTTCCATT
TATGAAACTATATTTTAGAGGAGTCTTAAAATACGCGTCGAAACGTCTGT
CCCAAATATGAATAACTCATTGGGACAGACGGAGTATGTTTTTGTTGTGA
AATGTGTTTCGAAGATGTGAAGGATTGAGTTTATGTGATTAAATATATGG
CATAATTTTAGTGAGGAATTGGGAATGTATGGAATTTACGCGGTGCTGTT
TGTTTGGAAGAGTGCGGAAATAATGGAACCAGGTAGAATGTGGAATGTAA
AATTGTAGATGGAGGAGGAACTGGAAGGAAGATGCGAGGGGGTGGGCAAG
AACACGGGAGAGTGCGTGTTTTTTAATGATGAGGTTTATGAATTAAATGA
ATGAAGTAATCAGGAGCATTTTAGATTTTGGGGAATAAGCGCCAATTGAA
TAAAGGAATAATTGGAGATCAATGTTATTAGGTCAAATTTATCATTTTAT
TTTGTTACTTCCACCTAAATGAGTGTGATAATAGTAGTGACCTTGTGATG
CTTGTTATACTATCTGATGATTAAGCTTGCAAAATGGATATTGTAGCTGT
GGTGTTTGACTTTCTTGATTTTATATGTTTTATTTTTTGGTTCTAGCTTT
CAATGTATTCATCCCGAGTTTTCTCTTTGGAATCATTGTACTGTGATACA
TAGTATAATGTGGTGAATGCTCCCGAACCATTTTCCTTTCAGTTTGAATG
GAGTGAGAGTAATTTATAACATAACAACCCTTGTGAAAGTGAAAAGCCAT
GATTCTTGTCAGATTTTTTTGGGAATATGATTTTGCAACTTATGTGACGC
AGGTGATGGAGTGGATGCAGACAAGAAAAATAAAATTTCATCCTACTGAT
CATGCTAAATTCTTGGATCTTGTATCCAAAGTCAAAGGGATATCTGCTGC
TGAAAATTATTTTAGTGGCCTCCCTGAGTCAGCAAAGGATAGATCTACCT
ATGGAGCTCTACTTAACTGCTATTGCAGAGAAAAGTTAGCTGAAAAGGCT
CAAACTTTATTTGAGAAGATGGATTCAATGCATATTGTTTCTTCATTGAC
TTTTAATAATCTTATGTCCCTATGTATGAGACGAAATATGCCAGAGGCAG
TGATTCCTTTGGTGCAAGAGATGAAGAACCGGAACTTACCTCTGGGTGTA
CATACTTATAACATCTGGATGACTAGCTATTCTCAAATGAATGATATTGA
GGGTGTAGAGAGAGTTTTTGAGGAGATGCAGGTAAACAATGGGGAGGAGC
AGAACAGTTGGACAGCATATAGTAACCTGGCAGCAGCCTATGTCAGGGCT
GGACTTAAAGAAAAAGCTGAATCAGGCCTTAAGAAGGTAGAAGCAGAAAT
TCAAAGGATGGGGCACCGCTGTGACCGGGAACCTTATCATTACCTGATAA
GCTTGTATGCTGGAACATCTAATCTTGCTGAGGTGTATAGGATCTGGAAG
ATCCTAAAGTCTTCATTTAAAGTAACCAACAACACTAGTACTCTTATTAT
GATCCAGTCTCTTGCCAGATTGGACGACATTGATGGCTTTAAGAAGATCT
TTCAGGAGTGGGAAATAACCTGTTCCAGTTACGATTTAAGGTTGGCAAAA
ACAGCTATTATGATGTACGTAAAGAATGGCTTGATCAAAGAAGCTGAAGA
TGTCATTGACAACATCTTGAAGAGATGTAAAGGACCTTTTTACCAGCACT
GCAAACCGTTAATCTTATACTATTTGGATAAGAGTCAAGTAGATTTGGCT
TTAGGATGCCTCAAAGCAGCTTTGTGTGAAGTCAAGGACAATGAACGGCA
TCAAACTTACGAGGATGTGAAAAGTTTTGTTATGGAATATTTTAAGAAAG
AGAGGAATGTAACTGGTGCTGAAAAGTGTTGCAAGATTCTGAAGAGCTTA
AAGCCTCTTGATTTCGAAGCATACAGGTTGTTGCTGGAGACTTATGTAGC
TGCTAGTAAGATAGCTCCCGAGATGCGTTGTAGGATCATGGATGATGGGA
TTGAAATTACCTCAGAACTTGAGAAACTGCTTGAAAGGGTCTGCCCCGAG
TAG

Sequence Length:

8153

Sequence Checksum:

e17b9afc512085a6e7b03c0ad0ba0e28

View location in JBrowse:

DCARv2_Chr5:28216382..28224534-

Cds:

>DCAR_018288cds ATGATGTTCCTTATCTGTGGATTCTTCACGCTGCAGGTTATGGAGTGGAT GAATAAGAGCGGCAATGGTTTTGCTCCCACTGACACTGCAAAGTATCTGG ATCTGACAGCAAAAGTCAAGGGTATATCTGCTGCTGAATATTATTTCAAT GGCCTCCTCCCGTCAGAAATTCATAAATGTGCATATGGAGCTCTGCTTAA CTGTTTTTGCCAAGGAGGACTGGAAGATAAGGCACATGCTCTGTTTGTGG AGATGGATAAGATGGGTATTGTTTCCACGATTGCTTTCAACAATCTTATG ACCTTGTATATGAAGATACACCAGCCAGAGAAGGTGCCCGCTTTAATTCA AGAGTTGAAGAACAGGAACATGCCACTGGACATGTTCTCCTATAGTGTTT GGATGGGTAGCTACTCATCTTTAAATGATATTAAAGCCGTGGAAAGGGTG TTCGAGGAGGTAAACCTAATATATGGAAAACAGAACTACGATTGGACAAT AATAAGTAACCTGGCTTCAGCTTATGTCAATGTTGGACTTGATGAAAAAG CTGAATTAACTCTTAAAGAATTGGAAAAAAAGCATGACATGACTGAAGAA GCTGGAAGGGTGTTTGAGCATGTTGTGAAGAGGTGTGAAGGACCTTACTA TCGATACTGGGAAATGTTAATGTCATACTATTTGGAGAAACATGAAATAG ATACAGCTTTAGAATGCCTCGAAGCAGCTATATCAGAAGGTAAGAACAAT GAATGGCATCCGACCCCTGAAGATGTTAACCGATTTATGGAGTACTTCAA GAAAGATAATGATGCAAACGGTGCTGAAATGTTCTGCAAGATTTTGAGGA AATTACAACCTCTCGATCATGGGACATACACATCATTGTTGGAGATTTAT GCAGGTGCCAGTCAGATTGTGTTATTCAATCCTAGCCGTCTATTCTCAGC TACACCATCGTCGCTGGTAAGATACGTGTGTACGGCGGTGAAAATGGAAC ATGACGCGGCGGCGGCGGCGGCGACCGTTCAGAAGGTAGTTAAACTGAAG AGAGATGTTCTGTACCTTCAATTATCAGCTCCAGATTCATCGAAAGCTTC GACTTTGGATACTTTAAATCTATTTTTTCCGGAAAAAGACGATTTCACAA GCAAATTTCAGCTGAATTCTTGTATATTGCAACTCCGAAGAAGTGGAAAA GTACTCCGAGCCCTGCAGGTAATGGAGTGGATGCACACTAGAAATATTAA ATTTGAACCTACTGATCATGCAAGACAGTTGGATCTGATATCACAGGTCA AGGGAATCTCTGCTGCTGAGAATCATTTTAACGGTATCCCAGAAATAGCG AAGGATATATCTACTTATGGTGCTCTACTTAACTGCTATTGCAGAGAAAA ATTGACTGACAAGGCACTGAATTTATTTGAGAAGATGGATACAATGCAGT TTCTTTCTTCAGTTGCTTTCAACAATCTTATGTCCTTGTATATGAGACTA AATATGCCAGAGAAAGTGCCTCCATTAGTCCAGGAGATGAAGAACAGAAA CATAGCACTGAGCGTACATACGTATAACATCTGGATCACTAGTTATACTT GTTTGAAAGATATTGAGGCAGCGGAAAAGGTTTTTGAGGAGATAACACAC AATAATGGAGCGGTGCAGCATGATTGGACAACATTTAGTAACTTGGCAGT AGCTTATGTTAAGGCTGGACTTTATGAGAAAGCTGAATCAACCCTTGAAA AAATGGAGGAAGAAATTAGGAAGATGGGGAAACGATGTGGCCGTAAACCA TTTCATTACCTGTTAAGCTTGTATGCTGGAACCTCTAATCTAGATAAGGT CCATAAAATCTGGAAGCACCTCAAGTCAGCATTTAAAATGGATTCCGATA AGAGTACTCTGGCAATGCTCGAGACACTTGCCAGATTGGACGACGTTAAT GGCTTTAAGAAGATCTTTGAGGAGTGGGAATCAACTTGTTCTACTTATGA TAGAAGGCTGCCATATCACGCTATTGGTTTCTACCTCAAGCATGGCATGA TCGAAGAAGCTGAAATGGTTTTCCACAACATCTTAAAGAGGTACAACGGA AATACTCATTGGTTTTGGAAACGAGTAATGCAGCATTATCTGGAGAAACA ACAGTTAGATTTTGCTTTGAGTTGCCTAGAAACAGCCATATCTGTAGTCA AGAACAACGAGTTGCATCCAACCCCTGAAGATGTTAATAGACTCATGGAG TATTTTAAGAAGGAGGGTGATGTCAATAAAGCTGAAAAGTTTTGCAAGAT CTTGAAGAAGGTAAACCTTCTGGATTCTGAAGCCTACAAATTATTGCTGG AGACTTATGTAGCTGCCAGTAAAGAGGCACCCGATATGCGCAATAGGATT ATGGATGATGGAATCGAAGCTAGTCCCGAACTTGAAGAACGGCGTCGTTT TCCATCGTCTTCTCCGCCGACTAGATATTTGTGTACGGCGGTTACAGAGA AACAACCCGCGGCTCCGGCGAGGTCTAAAAAATCCGGTAGAGAAAGAAGT GATGGACTATATAATAGATTATCGGCGTTAGGAAGAAGCGGAGGCTCGGC GATAGATACGTTGAATAAGTATTTCAGTGAAGGTAATTACGCTCGGAAAT ATGAACTTGATACTTGTATTTGGCAGCTCCGTAGATTCGGTAAAGCCGAC CACGCTCTCCAGGTGATGGAGTGGATGCAGACAAGAAAAATAAAATTTCA TCCTACTGATCATGCTAAATTCTTGGATCTTGTATCCAAAGTCAAAGGGA TATCTGCTGCTGAAAATTATTTTAGTGGCCTCCCTGAGTCAGCAAAGGAT AGATCTACCTATGGAGCTCTACTTAACTGCTATTGCAGAGAAAAGTTAGC TGAAAAGGCTCAAACTTTATTTGAGAAGATGGATTCAATGCATATTGTTT CTTCATTGACTTTTAATAATCTTATGTCCCTATGTATGAGACGAAATATG CCAGAGGCAGTGATTCCTTTGGTGCAAGAGATGAAGAACCGGAACTTACC TCTGGGTGTACATACTTATAACATCTGGATGACTAGCTATTCTCAAATGA ATGATATTGAGGGTGTAGAGAGAGTTTTTGAGGAGATGCAGGTAAACAAT GGGGAGGAGCAGAACAGTTGGACAGCATATAGTAACCTGGCAGCAGCCTA TGTCAGGGCTGGACTTAAAGAAAAAGCTGAATCAGGCCTTAAGAAGAATG GCTTGATCAAAGAAGCTGAAGATGTCATTGACAACATCTTGAAGAGATGT AAAGGACCTTTTTACCAGCACTGCAAACCGTTAATCTTATACTATTTGGA TAAGAGTCAAGTAGATTTGGCTTTAGGATGCCTCAAAGCAGCTTTGTGTG AAGTCAAGGACAATGAACGGCATCAAACTTACGAGGATGTGAAAAGTTTT GTTATGGAATATTTTAAGAAAGAGAGGAATGTAACTGGTGCTGAAAAGTG TTGCAAGATTCTGAAGAGCTTAAAGCCTCTTGATTTCGAAGCATACAGGT TGTTGCTGGAGACTTATGTAGCTGCTAGTAAGATAGCTCCCGAGATGCGT TGTAGGATCATGGATGATGGGATTGAAATTACCTCAGAACTTGAGAAACT GCTTGAAAGGGTCTGCCCCGAGTAG

Pep:

>DCAR_018288pep MMFLICGFFTLQVMEWMNKSGNGFAPTDTAKYLDLTAKVKGISAAEYYFN GLLPSEIHKCAYGALLNCFCQGGLEDKAHALFVEMDKMGIVSTIAFNNLM TLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERV FEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEE AGRVFEHVVKRCEGPYYRYWEMLMSYYLEKHEIDTALECLEAAISEGKNN EWHPTPEDVNRFMEYFKKDNDANGAEMFCKILRKLQPLDHGTYTSLLEIY AGASQIVLFNPSRLFSATPSSLVRYVCTAVKMEHDAAAAAATVQKVVKLK RDVLYLQLSAPDSSKASTLDTLNLFFPEKDDFTSKFQLNSCILQLRRSGK VLRALQVMEWMHTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIA KDISTYGALLNCYCREKLTDKALNLFEKMDTMQFLSSVAFNNLMSLYMRL NMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITH NNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKP FHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVN GFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNG NTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLME YFKKEGDVNKAEKFCKILKKVNLLDSEAYKLLLETYVAASKEAPDMRNRI MDDGIEASPELEERRRFPSSSPPTRYLCTAVTEKQPAAPARSKKSGRERS DGLYNRLSALGRSGGSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKAD HALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKD RSTYGALLNCYCREKLAEKAQTLFEKMDSMHIVSSLTFNNLMSLCMRRNM PEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNN GEEQNSWTAYSNLAAAYVRAGLKEKAESGLKKNGLIKEAEDVIDNILKRC KGPFYQHCKPLILYYLDKSQVDLALGCLKAALCEVKDNERHQTYEDVKSF VMEYFKKERNVTGAEKCCKILKSLKPLDFEAYRLLLETYVAASKIAPEMR CRIMDDGIEITSELEKLLERVCPE*