DCAR_024814 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_024814

Identifier:

DCAR_024814.gene

Locus Tag:

DCAR_024814

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 2 relationships.
Relationships
The mRNA, DCAR_024814, is a part of gene, DCAR_024814.
The genetic_marker, MK006389 K3833, is located in gene, DCAR_024814.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_024814	DCAR_024814.mRNA	mRNA	DCARv2_Chr7:19646499..19655487

Sequence:

ATGGCGTCATCACTTCACAACACTCACCTCCTCTTGATTCCCAAACCCAA
AGCCCCTTCAATCTTCACCAAAAATACACACACATCTACTTACACCTATA
CTTACAACTTCCAATTTTTTAAACCTTACGTCAATCTTCTTTCTTCTTCT
TCTAACTCTTCTCACATCTCACGCGTCTCCACCGCGCCTGTAGAGCACGC
GCCGTCGCCTTCCGACTTCGATTTTTCCAAGGAAATCGCTCGATTAAAAG
CCCTACGCTCCACCCTATCCAATTCAACTAACTTAGAGCAGAAAGTCAAA
GTAATTGACCGTGATTCCAGAGTTAAGAGCTTCTTCCGCACACACAGTGA
CGATGTTTTTGGTCTTTTGGAGGAACATGAGTTGTTTTTGATCAAGTGTG
TGGTGGCGGTGGGGCAGGAGCACCTGCTTAAGTCGGATGAGTTGGAGTTT
GAATTCGAGTCAAAGCGGAGTTCGTTGAAGAGTGCGTTGTATGGATTGGC
GGAGATGATCGAGAATTGGGATACAAATGAGGGAGTTGTGAAGAATGTGA
GTAGTGGTGAGAGGATTGATGATGATCAAGTGAAGGCTTTGCAATCGTTG
GTTAGAAATCTGGGAGAGGTTGAGCAGTTTTATGACTGCATTGGCGGAAT
TATTGGGTTGGTTCAATGTTCCTTTTAATTTATTTAGGCGCTTTTTGAAA
TAAAACGAATTAGGAAATAATATTTCAAGACTGATCTATGACGCATAATA
CACTGCTTTAAGTGGTTCGTAGTCGTATGATGTGATTTCCGTTTGTATTG
TAGAGACCACCAATTTGTGCAAATGTGATTGGATATATATTTGTACGCTT
AAATAGTTACGAGTGGACCATGAGCCCCCCGCCCCATATACGTGTGTCTT
TGTGAGAAAAAATAAAGTAAAGTTAGGACAGTTAGGATTGAGTTAATTCT
GAAATAGTTATATGATTTTGTAATGTAAATTTCGTTGTGGTAGCAGTTCC
GGTCTGCTGTCTGAATTTACATGTTAAAGGAGAAAGGGCGCTTTTGAATC
ATATGTTTACAATTATTATATTTTTGGGATGTGTGCTTAGGTTGCAATTG
TCTACTGTATCTGGAATTTGGAAAACAAGGCAATAAAAAAAATTATGCCT
CTATTATGGCACGGGATTCCTTTTTCTTCATATTGCCCCCATCGTTCCTT
TAAATATGATTGTTTTAGGTTCAACAGATGTTTACTGTTGCAAACGGCTT
ATAGTTTGATTTTAGGAACATTTAATTGATGCATTGTGTCACTTGTAAGA
GCACAAAGTCTAAATTCGCGACTTCTTGTCTAGATTCCATTTATGATTGA
CGGTGTTCCCAGTCAAACTAATGTTTTCTTTATGTTTTGTCTTAGTATCC
AAAGTTTGGACTTAAACCTATATGAAGTTAATAATTAATTCACCTTGCTC
AAAACCTTTTTTTATTAGATATCAGATCATGGTGCTGGAGCTTCTTGCTC
AATCAACTTACACAGAGCAGGGCATCAGTCTTTCCCATAGAAAAAGTAAA
TCAACAGAATCACAAATTCTTGAGATTAACCCTCCTAATGTGCTTGACCT
TTCAAAAGATACAGAATATGCATTTCAAGCAGCTCTATGGGGAATCGAGG
TTTGAACAGTACCTCTGTCTTTCTTCAAACGGAAATTTTTTGGCATTATA
CTACAAAGATATAAACAATATTGATTGGTTTCAGGGCCTGCCAGACTTGG
GAGAAATTTATCCTTTGGGTGGTTCCGCAGACAGGCTTGGTTTGGTTGAC
CCCGTTACAGGTGAATGTCTTCCGGCTGCAATGCTTCCATATTGCGGACG
GACATTGTTGGAAGGTCTTATAAGGGATCTTCAGGTATAATATCTGCTAT
TTGTCAATCTTTCAAGTTGGTATATTCCTTGTTGTGAATGTTGTTAATGT
ACTAGATTTGAAATGCAAGTTATACATTGTTGTAATTTTTTTGCAAGGCT
AGAGAGTTCTTGTATTTTAAATTGTATGCCAAACAATGTGTGAGCCCTGT
TGCAATTATGACAAGCTCAGCAAAGAATAACCATAAACACATCACATCAT
TGTGTGAAAAGCTGAGATGGTTTGGACGAGGCCGGTCCAGATTTAAACTT
TTTGAACAGGTTTGGGATTGAATACTTCAGTAGCAGTACTTTTTCCCTGG
TTATACTATTCTGTTGGAATATATATGTATGTATTTATAAGTTTAATACA
CACTTTTATAATTGATATGTTATCAAATGGCAGCCTCTTGTTCCAGCTGT
TGGTGCCGAAGATGGTAAGTGGTTGGTGGCCGGTAAATACTTTCCTGTAT
GTAAGCCTGGTGGTCATGGTGCGATATGGAAACTTGCCCATGACAAAGGC
GTTTTCCAGCATTTTCGTGACCATGGAAGAAAAGGTGCAACAGTTCGACA
AGTCAGGTTGCAGTCAAATATTTCATTGACCTTTTGACTTTTCTATTAAG
CCACGTAGTATATTGTTTTCTTTCTTAAAAAAGTTTCAAGATATATTGTC
ATTGATGAATTTGCAGTAATGTCGTGGCTGCTACCGACCTGACTCTCTTG
GCACTAGCTGGGATTGGATTGCGTCATAATAAAGTAGGTCCTGCAGTACA
GTATTTTTGCTATATATACAATAGTTCTCATTAAATTTTAATCTGGATTT
GACGATCTATGTGATTGTAAATAGCTAGTTAAACATCAGGGAGGATATAT
GTACATATTAACAGATCAAGAGTCCAGAAAGTAGAACACTGGAACCTGAA
CGTAATATAACATGAATAGAGGAAGCACTTCCTTCAAAAGATTGCTTCTG
ATAAAGCCACCTCAGGATTCTTATACCTGTTTAGAACTATTAAACAGTTT
TTGGTATACTGGCTATTGCCTTGAAGGAAAACCAAAAATATACCTGAACT
TTTACTGAAAAAATATTCAAGTGACTCTTTTCCTTAAGATCTAATATGCT
CTGATATAACATAAATTTATTTTAGCCAAGTTCCATGTAGAAAAGTAAGA
TTTAAATTGAGCTTCCCCTGTATGAATGCACCTGTTGTTTGCATTTTCTG
TATAATCAAATCCAAATACACGATCAGTATTACAGGATACTATCCGATTG
ATGGTTAGTTCCACATCTACTTAAGGGCTTCGAGGGGAATGTCAGAACCT
TGATAAAATTAGAATTTATATAAATAGCTTTAGTTATGGAACTGTTTTTT
TCCTCCTCTGAAGTTTGGAGTTTTGCTTGGGTTATATTATAACGAATTGA
ATAATATTGACGATTGGAAGCATAAAGTTTGAAAGCGTACAAATAAACAT
GTTTCATATGCTCTATTTCCCAAATGCTGATCTTACAGAAATTGGGATTC
GCGTCGTGTGAGCGGAATCCAGGGGCTACCGAAGGCATTAATGTTCTAGT
CGAGAAGAAGAATCATGATGGAAAGTGGGAATATGGCATTTCATGCATTG
AGTATACAGAGTTTGACAAGTTTGGAATTAGTAATGGACCTATTTCTAAA
CATAGGTATTATAAATTTCCTTATTCCTTTGATAAAAAGAGTGATAAAGA
TGTATTTATATAATTTGATTGATTTATGATTTTCTATACTCCTAACTTTC
ACGATTGGAATGTCTCCTACCTTTTAGTCAGATTGATACCCTTTCACGAA
ATATGCCAAAAATCTGCTAAAGATTCTTAAAATTTGATAAACAATAATTC
ATATAGTCAGGATCAAATAAAAACTTCATTCTGAATTAGAATTTAAACCC
AATATCAGTCTTGGATGCTAGTTGATGATGTTTATTTAATCAACAGCTAA
TATCTATCTTTTCAGCTGCAGTACACACTGTGTTGGGTTTCTGCTGCAGG
ACACTATGTTCTTTTTGTCAAATATAAAATATGGTGCACTCCTGCACTAT
ACAATATTTTTTTTTTATAAATCACATAATAATTTTTAAAGAAAAATTGT
TTTACACAGAACTTTTTCTTTTTCTCATTATAAAGAAATTATGTGAAACA
TATATATATTTCTGCTTAAGCATATCGTAATTGATTTTAAGGTTTCAACA
CTTACGTGGTTCTAAGTAGAACCCGACTTTATATATATTATATCTAACTT
TATCAACTTAACATTGTAATATATTGGTAAGTGAACTTTTAAGGTTAACG
CAAATGATGTGTTAAATAAGAATTTAATGCACACGATCTGTTGTTTGCTT
TTTATAGATTTTAGTGCAAAAATATGAAAGCTCAGTTTGATAATACCATA
GATAATACATGTCTGGTTCAATAGGTAATAACAAAAGATTGTAAAATTTA
TTTATAGGGAGATGGTCTCTGACAATGGATTGTTTGGCAACAATCTTTCC
GCCCTTTTTTATGGCTGAATGATAAAAACCCTAGATGGGTGTCTAAAGCA
CTGATAAGTGACGTATCCCCCTACATTCACATAAATAATTATGTGTTACG
TCTTTTCAGCTATAAAAAACCGCGGAAAGATTGTTATAACAATCAATTTG
TCCGGGACCGGACCCTTATTATTATGTATTGGTGTTTCTTTCAAAACAAC
CAAAATTACGCGCAAGGCGTAAACCACTTGGAATAAATTTATTAACTTTA
AAGTATATTTTGTGCTCAGATTCTTGCATGCATCTTATTTGCATATTTGA
TGAATTTTGTATATGTCTAAAGTGAGTTGTAGTGTTGGTTAGACTTGACC
TTATATACAATTCTAATGTATATTTTCTTTATTAGACTCATAATAATCAT
TTGTGTTGATTGTATGTCAATTCTATTTGCCAATATTTGGAGTATGGTTA
AGAAAATAAATCTGATGTATAGTGTAAAGAAATATTCTGGCACGGGTGAG
GGTGCGGAGGAAAAGATCTTATCCAGATTTTAGTCAGAGTCGGCTCGTTT
TTAACATCTTCCAAACCTAAATTCACTGCCCAAAAAAGTAAATTACCCAT
CATGAGGCCATCTGGAGTCATCAACAAAACCTTTAGTTCACATATGATAC
CATTGCAACACTATTAGGTTCTTACATACGGCTAATTATAGTTTCAAACG
GTGATGCAATATGCATTATACTGAATCGAAGTAAAAATTTCTCAGTTTGC
AGTTAATTAAAAGAAGCATTTAGTATATAGTATCATAAAATACCAATCAC
ATGTGAGTTTCTGTAACCATTTATGTTTGATGACTGTCTTTTCGTCTGTA
TTTATTTTAGAGTGCAATATATGTGTTTTTTCCATGACCGACCTCTTGCG
TTGTGATAAGTTTGCAGGCAGAGTTTCCTGCCAATACAAACATTCTGTAC
GTGGACTTGCATTCTGCAGAGCTTATCGGATCAAGTAATACCGAAACCAG
TTTGCCAGGCATGCTGCTTAATGTAAAGAAGCCAATCACGTACATGGACC
AGTGTGGTATCCATCATCGGTAAATAGCATAAATTTTGAATTTCTTTAAG
TATTTGATATTCTGGTGGATGGCCACTGCAAAGATACCTGCTACTACAAA
TTCTAGAGAGAATGAAGGAGATTCTTGACAAGTGCAGTAACTAATTTTTC
CTTGTATATCTATATTTATAAATGGAGGATGCACCCCTTTTAAGTCGGCG
TGTTGAGTAACTTGGAGTTGATAAATTAAACCCCTGATTGGTAATTCACA
TGAGAGTATTAACTAGATTTTGCATTGCGCTTCTTAATATAAAGTTACAA
ATTAGCAAAAGACGGGAAGAAACCAACAACTTTTGCATCTTTCTTTATGT
CATCATAAACACCTTTTAAATTACAGACCAGCAAAAGAAGGGAAAAGACC
AACACCCTCTCCGTCTTATTTTGCCATTATCAAGAGAATATTGCTATTTT
TCAAGTTAAATAAAAACTCCTAAGCTTAATTATTAAAATCAATACAAGTC
AAATATGATTGGAATTGATTTACTCTTGATAATCAAGTGCAGAATATTAT
TAATTACTAAAGATCTTTGTGAGAAGCCGGGGAATCTTCATTATTTTTCT
GCTTCCTGATACTGCAGCCTTCACATGATTTCTTAACCTTTACGGTCATA
GTCCTAGTGGTAGATCTATCAATTACTTCAGATTTGTACAATGTTTACTC
ACAAGAAAACTGCAGACCACTTTGCTTTGGAATAAATAATAAGTAACCCT
GAGGATCTGTGTTGATTTAGGTATTCATAAAGCATTTTTGCTTATGAAGC
TAAGAATCTCTGTTTGATCATTTTTTTGGATAGTGTCTTGGTTCTGATTG
TTATTTCTTGTGAGTAGTGTTTACGGTGGACGTCTGGAATGCACGATGCA
AAATATTGCGGATAATTTTGTGAACATGTATCCCTCTCGGTGTTACAAAG
GTGTAGAAGGTGATACAGCTATTTTTTATTATTAATTTATGCAATTCAAT
ATAGTTTATAGCCACAACTTGCATTATGTTAAATATGTATTTACCCCCAT
ACACTATAGACTTGTTTGCTTTGTAATTGCAGATTTGTTGGATACCTTTA
TTGTGTACAATGACCGAAGGAAAGTTACATCATCTGCTAAGAGAAAAAGA
AAACATGCCGACAAGTCCTTACATCAGGTCCATTTGAGTTTATTTAAAAT
TATATAAATTATATATCCTACCCCTAAGATTGGATGCTTAGTGTCATCTG
CAGAATATGTGCATTCCAAATTCATCTTCTCTTAGTAGTTATCAATTTAA
CTAATTTATCTTATATGTCCATGTGTTTTCGAAGCCATGAAGTTACATAT
ATGTGCTTGCTAACGTGATGTGACCCAGAACCTGACTCGTTTTTATAGAG
ACAACACGCAAATGATACCTCAATTAGCCCGAAGAAATCTGAAAGGATTT
GTTGATGTTCATCTGATCAGTTTTTGTGAATTTATGAAATTGATACATTT
ACTAAACGAACATAACCCTAAAATGCACCGACACCCTTTATCTCCACCAA
GTATTGTAATATTATATGCCTAGTATAGAATGTATGTCAGTGTTATACTG
TATTTTTTTGTTTGATCAAATCCATAAATGAACCCAATGATTGCTTATTA
ATGTATATAATACATGTGCAGACTCCAGATGGGTCGTTGTTAGACATCAT
ACGCAATTCCTATGATCTTCTTTCCCGGTGTGATATGAAAATTCCAGAGG
TATAGATTTAAGAACCTTTGCGATTTTTCTCTGAACATGCTATATCTGTC
TTCTTTTAGTCAGCTACTTTATATTATAATGAGCCTAATGATTAGTTGTG
ATTATGAGAAATATTAAGTATTACCATAGTACTTATCATAAACATTCTTG
TGATATTTCATTAAAAGCGTTGTCTTCCGTTTATGATATAGATTGGAGAC
AATGACAAATATGCTGATTCTGGACCTCCTTATCTTATATTTCTTCATCC
TGCTCTTGGTCCACTCTGGGAAGTCACCAGACAGAAGGTAAAACATTATC
ACACTTGTCATCACATCTAATGATTTTACTGATTTCTAGTTTCACCGTCC
TCATTAAACTTTGTTCCAAACATGAAATTCAATCTATTTCTATTTGATCA
GTCGTTACCTATAGTCCTAATCAAAAGACTTCCCATTTCAAGAAAAAGAA
ACTGTAGGAGTTTGTCTATTGTTGAGAACCGGAAGCCTTCAAGCAATAAT
TATCGGTTAACATCCTGTTTTTACCGTGTCCATGACTACAAAACATTTTA
ATAACTTTTGAAGCAATTGATTGTTACCTTTCTTTTGCTAGATAGAATTG
CTACCTCCCTTCACATTTGATTGCTGCTTATATATTATTCATAGACATAG
AAGAGATGCTAATCAGAATCCTCTTCTAAAGTTTGGAACATATATAGTAA
TTTATTAAATTATCCCTCGATAACTAAAAAAGCAAACTGTAACTTCTTTG
TCTTTAATACTTATCAGTTCAGCGGTGGTTCTATTACTAAAGGTTCAGAG
TTGCAAATCGAGGTGGCTGAATTTTTTTGGAAGGATGTCCAGGTTAAAGT
CCATACATATATATTTGACGTCTTACTCTATTTATAGCTCTTTGCTGATC
TTCTCCTGCCTACTTTCACTGGATCATCTTTCCAGCTTGATGGTAGTCTA
CTTGTTATAGCTGAAAATGTCATGGGCTCAACTAAGACTGATCAAGATGG
TGAGCCTCTACTACAGTATGGGCATAGGTACCAAGTTACCATTCAACTAA
AATGAATTATAAGTTTTGAAAAGAGTTAGGAACAAATGGCTAATAGTTAA
TATAAATTCAAAACCGGACTTCATTCTTGCAGGTGTGGAAGATGTAAGTT
AGAGAATGTTAAAGTAGTAAATGATGGAATTGACTGGAATTCAAGTGATA
ACATCTACTGGAAGCATGAAGTCCAGCGGTTCGAGGCCCTCAAGGTCATT
TTGCATGGAAATGCCGAATTTGAAGCTGTGGATGTAATTCTGCAGGTTAG
ATTCAGATTGGGCTATTTTATTATCAAATGTGGTATAAGTTAAATTTTCA
GTTTCATGAAGTTTGACCTTTTGATGAGGCGCATACTAACTTTTTGCACA
TCTTAGCGTAAGACCTTAACAAACAGTTTTATGCCACACTGTATCTGGTC
GAGAAAATAATCTTAGTATCTTACCAACTTCAGGTATTTAGATCTACACA
ATAATGTGTACAATATTCTATGAGTACTCTATGTAAATTACATACTAATA
TGAGGTCTTCGTATAAAGATGTATAGCATATTCTTCTTAATGGTAAAGAT
GTTTACATTCCAAAAATCAAAACTATTACCAAGTTTGCTTAGGATGCAAA
ACTAACACGGTCCTCTGATTTCAAATACAGAAATATTAAATGCTAATTTT
CTGGTCCTAATTTATGCAGGGCAATCATACATTTGACGTCCCAAGCGGCT
ATAGAATGAAGGTTTCATCTGCAAATTCAGGTTATTGA

Sequence Length:

8988

Sequence Checksum:

b269ab6296b796066f2e7a7244d2c502

View location in JBrowse:

DCARv2_Chr7:19646500..19655487+

Cds:

>DCAR_024814cds ATGGCGTCATCACTTCACAACACTCACCTCCTCTTGATTCCCAAACCCAA AGCCCCTTCAATCTTCACCAAAAATACACACACATCTACTTACACCTATA CTTACAACTTCCAATTTTTTAAACCTTACGTCAATCTTCTTTCTTCTTCT TCTAACTCTTCTCACATCTCACGCGTCTCCACCGCGCCTGTAGAGCACGC GCCGTCGCCTTCCGACTTCGATTTTTCCAAGGAAATCGCTCGATTAAAAG CCCTACGCTCCACCCTATCCAATTCAACTAACTTAGAGCAGAAAGTCAAA GTAATTGACCGTGATTCCAGAGTTAAGAGCTTCTTCCGCACACACAGTGA CGATGTTTTTGGTCTTTTGGAGGAACATGAGTTGTTTTTGATCAAGTGTG TGGTGGCGGTGGGGCAGGAGCACCTGCTTAAGTCGGATGAGTTGGAGTTT GAATTCGAGTCAAAGCGGAGTTCGTTGAAGAGTGCGTTGTATGGATTGGC GGAGATGATCGAGAATTGGGATACAAATGAGGGAGTTGTGAAGAATGTGA GTAGTGGTGAGAGGATTGATGATGATCAAGTGAAGGCTTTGCAATCGTTG GTTAGAAATCTGGGAGAGGTTGAGCAGTTTTATGACTGCATTGGCGGAAT TATTGGATATCAGATCATGGTGCTGGAGCTTCTTGCTCAATCAACTTACA CAGAGCAGGGCATCAGTCTTTCCCATAGAAAAAGTAAATCAACAGAATCA CAAATTCTTGAGATTAACCCTCCTAATGTGCTTGACCTTTCAAAAGATAC AGAATATGCATTTCAAGCAGCTCTATGGGGAATCGAGGGCCTGCCAGACT TGGGAGAAATTTATCCTTTGGGTGGTTCCGCAGACAGGCTTGGTTTGGTT GACCCCGTTACAGGTGAATGTCTTCCGGCTGCAATGCTTCCATATTGCGG ACGGACATTGTTGGAAGGTCTTATAAGGGATCTTCAGGCTAGAGAGTTCT TGTATTTTAAATTGTATGCCAAACAATGTGTGAGCCCTGTTGCAATTATG ACAAGCTCAGCAAAGAATAACCATAAACACATCACATCATTGTGTGAAAA GCTGAGATGGTTTGGACGAGGCCGGTCCAGATTTAAACTTTTTGAACAGC CTCTTGTTCCAGCTGTTGGTGCCGAAGATGGTAAGTGGTTGGTGGCCGGT AAATACTTTCCTGTATGTAAGCCTGGTGGTCATGGTGCGATATGGAAACT TGCCCATGACAAAGGCGTTTTCCAGCATTTTCGTGACCATGGAAGAAAAG GTGCAACAGTTCGACAAGTCAGTAATGTCGTGGCTGCTACCGACCTGACT CTCTTGGCACTAGCTGGGATTGGATTGCGTCATAATAAAAAATTGGGATT CGCGTCGTGTGAGCGGAATCCAGGGGCTACCGAAGGCATTAATGTTCTAG TCGAGAAGAAGAATCATGATGGAAAGTGGGAATATGGCATTTCATGCATT GAGTATACAGAGTTTGACAAGTTTGGAATTAGTAATGGACCTATTTCTAA ACATAGTTTGCAGGCAGAGTTTCCTGCCAATACAAACATTCTGTACGTGG ACTTGCATTCTGCAGAGCTTATCGGATCAAGTAATACCGAAACCAGTTTG CCAGGCATGCTGCTTAATGTAAAGAAGCCAATCACGTACATGGACCAGTG TGGTATCCATCATCGTGTTTACGGTGGACGTCTGGAATGCACGATGCAAA ATATTGCGGATAATTTTGTGAACATGTATCCCTCTCGGTGTTACAAAGGT GTAGAAGATTTGTTGGATACCTTTATTGTGTACAATGACCGAAGGAAAGT TACATCATCTGCTAAGAGAAAAAGAAAACATGCCGACAAGTCCTTACATC AGACTCCAGATGGGTCGTTGTTAGACATCATACGCAATTCCTATGATCTT CTTTCCCGGTGTGATATGAAAATTCCAGAGATTGGAGACAATGACAAATA TGCTGATTCTGGACCTCCTTATCTTATATTTCTTCATCCTGCTCTTGGTC CACTCTGGGAAGTCACCAGACAGAAGTTCAGCGGTGGTTCTATTACTAAA GGTTCAGAGTTGCAAATCGAGGTGGCTGAATTTTTTTGGAAGGATGTCCA GCTCTTTGCTGATCTTCTCCTGCCTACTTTCACTGGATCATCTTTCCAGC TTGATGGTAGTCTACTTGTTATAGCTGAAAATGTCATGGGCTCAACTAAG ACTGATCAAGATGGTGAGCCTCTACTACAGTATGGGCATAGGTGTGGAAG ATGTAAGTTAGAGAATGTTAAAGTAGTAAATGATGGAATTGACTGGAATT CAAGTGATAACATCTACTGGAAGCATGAAGTCCAGCGGTTCGAGGCCCTC AAGGTCATTTTGCATGGAAATGCCGAATTTGAAGCTGTGGATGTAATTCT GCAGGGCAATCATACATTTGACGTCCCAAGCGGCTATAGAATGAAGGTTT CATCTGCAAATTCAGGTTATTGA

Pep:

>DCAR_024814pep MASSLHNTHLLLIPKPKAPSIFTKNTHTSTYTYTYNFQFFKPYVNLLSSS SNSSHISRVSTAPVEHAPSPSDFDFSKEIARLKALRSTLSNSTNLEQKVK VIDRDSRVKSFFRTHSDDVFGLLEEHELFLIKCVVAVGQEHLLKSDELEF EFESKRSSLKSALYGLAEMIENWDTNEGVVKNVSSGERIDDDQVKALQSL VRNLGEVEQFYDCIGGIIGYQIMVLELLAQSTYTEQGISLSHRKSKSTES QILEINPPNVLDLSKDTEYAFQAALWGIEGLPDLGEIYPLGGSADRLGLV DPVTGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYAKQCVSPVAIM TSSAKNNHKHITSLCEKLRWFGRGRSRFKLFEQPLVPAVGAEDGKWLVAG KYFPVCKPGGHGAIWKLAHDKGVFQHFRDHGRKGATVRQVSNVVAATDLT LLALAGIGLRHNKKLGFASCERNPGATEGINVLVEKKNHDGKWEYGISCI EYTEFDKFGISNGPISKHSLQAEFPANTNILYVDLHSAELIGSSNTETSL PGMLLNVKKPITYMDQCGIHHRVYGGRLECTMQNIADNFVNMYPSRCYKG VEDLLDTFIVYNDRRKVTSSAKRKRKHADKSLHQTPDGSLLDIIRNSYDL LSRCDMKIPEIGDNDKYADSGPPYLIFLHPALGPLWEVTRQKFSGGSITK GSELQIEVAEFFWKDVQLFADLLLPTFTGSSFQLDGSLLVIAENVMGSTK TDQDGEPLLQYGHRCGRCKLENVKVVNDGIDWNSSDNIYWKHEVQRFEAL KVILHGNAEFEAVDVILQGNHTFDVPSGYRMKVSSANSGY*