DCAR_025958 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_025958

Identifier:

DCAR_025958.gene

Locus Tag:

DCAR_025958

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 3 relationships.
Relationships
The mRNA, DCAR_025958, is a part of gene, DCAR_025958.
The genetic_marker, MK004760 K2204, is located in gene, DCAR_025958.
The genetic_marker, MK007858 TP30939, is located in gene, DCAR_025958.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_025958	DCAR_025958.mRNA	mRNA	DCARv2_Chr7:32026478..32033857

Sequence:

CTATATCATTTAATAAATATTAATTTTATATTTTCAATATTTATACGATA
CTTCATATTTTTCGCATCACGTGACTTTTGATCACTTATTTAAATATTTG
ACCCTTTAATCAAATTAATTATTTTCCTCATAAATTATGATATAATTAAA
AAACATATTTTACTTACATATTTATAAAATTATAACCTTATTAAAATTAA
ATAATATAATATAAACGGCCATATGCCCTTCTGCTCTCATCTCTTTATCG
GCTTTCATTTCAAGCACATAGTTTAAAAGTGGCTTGACGACATACTTAAG
TATATTTTAAACTCGTAAGAGAATAATTATTTTGATATAACACGTAGTTT
ATGTTTCGTGATTTTCTTCCTTAAACCGTTAAACGTTTAACTTTTTGTTT
ATTTGTCTCTTCTTAATGTATTAGGTTCTTAATTTATATTATAATTATTT
TTTAAAATAAAAATATAAGTTTGTTTATTTTACCCTCCTATATCTTAAGT
GCTTTCATATAATGTTATCATATATTTAATTTATATTATCATATTTTAGA
AAAAAAAATCAAAACCCCCCTTTTCATATAACATGGGACTCTCGTAACGT
CCCTGAACTCACTTTTTTTGAAATGGTTTTAGACATAAGAAATATTCTTA
GAAATAAAAGTTTTAGGTTCATAGCCTTCTTCGACAAAAAAACAATACTG
ATGCAAATCAATCTTTTTGGTCAAAAATAAAATAAAAACATGTACGACTA
TTTCAATTAAGGATTTTTGTTGCCACATTACGATGTTTTTCAAAACGAAG
TGTATTGATTGAGTGGGAGAACGGGCCCAATAAACGAAACTGTCGCTGTC
TCTCTCGGAATAATAAATAAACAAACGCGATCATTAATCCACTCCCCGTT
TCACTTTCCTTTTTCAGCACATTTCAAACACTCTCTTTCTAGAGAGAGAA
ACACTCGCCGCGCTTCTAGAGAGAGAAACACTCGCCGCGCTTCTAGAGAG
AGAAACACTCGCCGCGCTTCTAGAGAGAGAAACACTGCAAACTCACCCTA
ACCTAGCCCCCATGGAAACTATCTCACCTCCACTTCACAAAAAAAGCTAC
CGCTCCGGCAATGTCGCCGCCGGGAAGACGCCGTACGACGACGTTTTCGC
GGCTCGGCCGAAGGTCAAAGTTCCGACTCTCTCTCCTCGCGACGAGGACT
ACTCCGAGATTTTCGAGGTGTTTCACGCTTCCCGAGGCTCTTCTATTCCT
GTGCTTGATCTTCCTGCTGTTGGTGAAGATGAGGATCCTGATGTTTACTT
TGATGTTCGGAGCTCAGGGTTTGACTACTCCGAAGTTTTCGGGAGCTCTA
ACGGTTTCGATTTCGCGCTGTACGAGCAGCTGTTTCAGCAATCCAAAGCT
GATAATGATTCGTCTAATGAAGTTTGGTATGCTAACTCTACTAATCTATC
TTCTTAATTTTTTAAATATTTTTAATATTTTTTTGATAATTTATTTGTTG
CTGAGCTACGATTGCTACTCCATTGTGCTTTCTTATGTTGCCAAAACTTG
TAGTAGTTGCAGACCTTTAATAGGTCGTTTTAGGTGTGTGTATGTCAATT
TAAATTATTTTTGTGCAGGATGAAATTGAAATCAACCGTTAACTCTACAT
TGCGGTTTAAATGAGGTTGAGTTTCTAGATTAGTTTCTTTATCAGTTGTA
GTATAATGAGCTTAATTTAATGCTATGTACATTTTTTTAGGCCATATGGT
TTAGTTTGGCCTATGTTCTTATGTTGCTAATAATGGATAAAAGTCAACCT
AAAAAGTAAGAATACGTAAACTGAAGAATTATCTCTATTGATACGGAACT
TGTTATGGCAACCAAGGTTTTATATCCAATGAGTGGCCAGGTTTTTTATA
TAGGTCACACATGTAACAGCTAACAAGACATACATTAAGTTTTCCTGAAG
CTTTGTAAAAAATTTGTTGTTGCTCAACTGCAAAAGCTATTACGTTGAGC
TTTTAAATGTTGCAAAATTTGTGGTATTTTTTTAACATATTATTATTTTC
AGACAAAATAAATTTTTCGCTAAACTTCAATAGGTATCTAACTATTTTAC
AGGGGTGTGTATGTCGAGTTTTTTTCTGCAGGACGAGACTTGAAATTAAC
TGTTAACTTTACATCGCGGTTTAAATGAGACCGAGCTTCTAAATTAGTTT
CTTTATCAGTTGTAATAATATAATAAACTTATTGTAAGGCTACGTATTGA
CTTGCATTTTTTGTGTGATTCTGAACTTCTTTAAGAATATGGTTTACTTA
GGCAAATTTGGCATGAGTTTTGGCCTAGTTTGGCCTATGTTGTTATGTCT
AATAATGGATAAAAGTCTATGTAAAAAGTAGAAGTACATAGACTGAAGAA
TTATTTCTGTAAACTCACTTACTGCTTATTATAACAACCTAGGTTTTATA
TCCAGTAAGTTGTCGGCTTATTTGCATAGGGCAGACAAATAACAAGCTAT
ATACATTAACTTCTACTGAACGACGTTACAAAATATTTTTGATTGCCATA
TACAGGGTTAGTAACAAATTCACCGAATCATTTTATTTGAGTTTTAGTGG
TTGGCCATCACATATTTCTTGCCGACCCTGTCGATTTTAAGCTAATCCTA
ATGGTGGTATTGTCGAAAAAGAGGAAGGCTAACTGTGAATCTCATTCCTT
TTTTCTCATCATCAGGACTCCAGCTCAAAGTGAATCTCTCTCAGATGAAT
CAGATCCTTCTGGTTGCTCTGAAAAGAATCAAAGCTTGTCAAGTGGAGAT
ATACACCAGTCATATGATGATACAAAGCAGTTCAACATATCATATCACAA
GGCCAATCCAAAAGGCAAGGATAATATATTAGATGCGATGACACATGTTA
CTCAGTTAGATGCTATTCCTGGATATAGCTTCATTATCAGTGACACCTCA
CCGTCGAAACATGTAGAAGTTGAAAGTTTACCCGTGCAGATTGAGAGGAA
CACAGATTGTGGTGGAGCAGTTACAGAAGGAAAACGACTTAGGAAAACAG
TATCACAACCCCCGATCAGTGATATTGGTTTACAAGGTTGTAAAACCGAA
GCCAGTGTTTTGGCTCACAATGACAAATCCAGGTCTCCAGGGAAGGCATT
TATATCTGTGTCTGATGTAAACCTCAGGACTCGACCTTCTCATTTGCCAC
CCCCCTCAAGACCACCACCCTTGTTTGCTGACAGAGCCGAGAACTCCAGT
AGACTAAATTCGAAATTCAAAGCTTCCAAAAGTTATGTATTTGAAAGGAC
AAATGCTGGCGATTCACAACCTTATTTTGACGTGGAAATAGATGCAAGTT
CGTCAGCTGCAGCATCTGCTGCGGCTGTAAAAGATGCAGTGGAGAGAGCT
CAGGAGCAACTAAGTAATGCGAAAGAAATGATGGAGAGGAAGAAGGATGG
TCTCGAAAACCGTACAAAGTCACATTTCAAGAAGGATATAGGTCAGAGGG
GTGAAAAGAACATCAAATTTGATATGTTGAAAAGTTCTAAAGGTGACATA
TTTTCTCCTAAATATGCAAGAGAAGGAAGTGAAATTAAAACTTTTGCTGA
AGAAAATGAAAAAAAGGCGAGGAACATGATCCATGTTGCCTCAAGTGCAA
CAGAAGGAAAAGAAGATATACACAGTAAACAGGGGAAAGAACATATGCAG
TCTCAAGTACCACATGAAACTGAAGGAACTGTTGCATGGAGAGAAGCAAC
TCAATTATATGAAGTGGTCGAAGAAAAGAAAATTAGTGAGGCATGTAGAT
CAGCAGATCATTCAACGTCTAGTGACTCTGGAGTTGGTGAAACAGGTATT
GCCACTGCTGTTGAGCTACAAGAATGTCAAATGCAAACAAAAGCAACCTC
GGCGGACCATGAATGTCAAGGAAATGTGGAGAAATTTGAAGTGTTCAAGG
GTGGCCATGAACAGGTAAAAATTAAAGCAGCCCAAGGATCAATTTGGCAG
GAAGAGCATCAGGAGAAATCAAAATTGGCGCAGATGGGTGATGAATGTCA
ACATATGGACAAGGAAACCAGAGGGGCTTTACAACCTGGAGAAACAAATG
ACAAAGCAAATGCGGTTGATAAATATGAGAATGATGATATCGGGACACAA
GATCAGTTAGAAGAAAATGAGGTGATTTTTATACAGAAAATTGTGGGGGC
TAATGAAAGCTATGAAAAGGTAATCGAAATTATGGAAGCTCCTGAACGGA
AAGGTAGTGGAATGGAAAGAACTGCATCTTTCGACAGCATTGAAAATACA
ATAAAATTTAGCGCAGATGTTAAACAAGAGCGAGGAAAATTCAATGAGGC
CACAAGGCAGAGTGCCAAAGACAAGCTGGAAAAAGAAGTTTTTGAAAATC
ATGGAAATGAGAGTAAACATGTGAAGACTTATGAAATGGGACAGAATAAG
GAAAAACAAGATGAAGTGGCTGAGTGTAAGGGAAAAACAAATCAATTGGA
AGAGGTTTTTGAGCAAGAAGAGAGCAACAATAGACTAGGAGTTGATCTTA
AATGGCAAGAATGCAAGAAAGAACAGAACTTTGTCAGTGAAGCAGAAAAG
ATTGAGAAGGGTTCTAAAATTACTATTGAGCAGTGGCAGAATACAGAAAG
AGAAGAGAAGGCTTCTGAAGAAGCGGCAAGTGAGGAGCGGCCAAATGATT
TGAGTGAACAAGATGAGACTGAGAAGAGACTCAAAGAGGCCTGGGAGAAG
AAAGAAAAATGGAAAAGATCACGCGAGGCTCGTGAAAGTGAGAAGAGGGT
AGAATTGTTGTTTAAGGAGGATGAGATAATGGATAGATCAAGTGAAGCCA
ATGTGTGGATCAAAGAAGGAAAAGGCGAAGGATTTATTGAACACGACATT
GTTCAGGAGCAACTTATGAGGGTAGTAAGCGATGGGATACTGAATTTGAA
CCAAGGAAACTATACTACAATGGAGGAACCCAAGATATTTGATGGTGGAA
GCGGGCATATTCACGAGCCTTCTGTGCCCGTGGAAAATGAAAGCTTAGAA
ATGGAGCACAAAACTCATGAAAGGGAAGTTGAAGTTAATAATGAGCCCCA
AGAAGCAAATGTTAACTCTAACCTGGATCAAAATGGCTTGCAATATGAAG
GAATTAATGACAAAAATAAAGACGAGCCACTTTGTCAAATTGGCATCACG
GATATGTATAATGAAGATGGCATTGATCAAACAACAGGAATACACATTAA
GAAAACTAGTGGAACTAATGAAATGGCTTCTGATATTGAGAATGCAAACA
TTTCAACGCATACACGGAGAGAGGCAAGGAGGAACTTCAAAGGTATCCAA
CCCGACCAACACGCTTTTAACCAGGCAGAAAATGAGGATAAATTCACGGC
ACCTCGAGTGGTGAAGAAGTCCGTCGAAAATGAAAGAAAACCGGGTAATG
TTCTGCCAGCTAAAAAGTTTACTAGCCAAAATCCAGAAGTAGAAGAGACT
AATTTTCAAAAGAAGACTAGATTAGAAGAAAGGGAAAAAGAAAGATTAGA
AAAGGAAAGAGATCTGGAAAATGATTTCTTAAGAAAGCTAGAAGAAGAGA
AAGAGAGAGAAAGAGAAAGAGAAAAGGATCGCATGGGTGTTGATACAGCT
ACTCGTGAAGCTCGTGAAAGGGCATTCGCTGATACTAGGGAAAGGGCAGA
AAGGGCAGCAGTTGAAAGAGCAACTGCTGAAGTTCGACAAAGAGCACTGG
CAGAAGCCCGGGAAAGATTAGAGAAGGCATCTGCAGAGGCTAGGGAGAGG
CTAATTGCTGATAAGGCTTCAGATGCCAGGCTCAAGGCTGAGCGTGCTGC
AGTAGAAAGAGCAACTGCTGAGGCTCGAGAACGTGCTATTGAAAAAGCAA
AGGCTGAGAAGGCTTCTTATGAGTCACGTGACCGAGTAGAGAGACCTGTG
ACTGACAAATTTTCTGCTTATTCCAGGAATGGTGGATTCAGACAGTGCTC
TTCATCCAATGTGAGTTAATTTTATCTCTGTGGTGTACATGCCTGACAGC
TTACTAAATATGATTCAAACATGTCAGGATCTTCAGAACCTGCAACATCA
GGGGATGGGGCCTTCCCGTGATTTGAAACATTCGCACTCTTCGGTTTCTG
GTGGTGGGTGATATATAAACCTCTAATTTTGCTGTTTGGCAGATTTACTT
TTGTTAGTGCTACTTTTTAGCAGTTTAACAATATTGAGGTTGCTAGAAAT
AATGATATGGTTTGCTGATGAAATTTTGCAGGACTTGAAGGTGAATCAGC
TCAGAGGTGTAAAGCTCGATTAGAGAGATATCAGAGAACAGCTGAGCGTG
CTGTATGTGCTTGTAATTACTAGTTTTTTTTTTCTTTTTGCTTACCTTAA
AGTGGCAGCCATAAACTCAAAGTAATTGACGACATATTAGGCAAAAGCTC
TGGCGGAGAAGAATATGCGTGATCTTATAGCTCATAGAGAGCAAATAGAG
AGAAGTGTAAGTATTTTTTACTTGCATACTTGAGTTTCTGCCGCGTATAT
ATTTCTGACTCTTTCTTTTTCATTCTTTTTGGTCATGCAGAGACTCGCAG
AATCCCTGGATGCTGATGTTAAACGATGGTCAAGTGGGAAAGAAGGGAAT
TTGCGTGCTTTGCTTTCAACATTACAATATGTATGGTCAATTATCCCTGT
ACTCGTGATTAAATGTGGTTTCCTTCATTAGCTATTCATTCTCCTAACTT
AAATTTATAGGAATGAGTGTAAAAATAGTGCTCTGACAATGTCGTAGTGA
ATCCTAAAATCACTTGGACACTCCCTTCATTCCAAACGTCACTCTTATAT
TATGATTCTCATAAGTTATATTTTATTATATAATATTACAAGCACTCCTT
TCTCTTTCTATTGTATGTTGAACTTTTAGTGGTACAAAGTACTTCTAATA
ATAATAAAATATCAAATAAGGAATGAGTATATGGAACTTGTTGAAGATGA
AACTACCTATCTATATCCTAAATTACCAGGATCTAATTTTCTATATTATC
TTTAAGTTATGAGTTGGGATACCTTTGGAGATGCTCTAATTATTCGAGCA
CATGATTGAGTTGATAAATTATGTGTTTTCTGCTAATAAATATAAATATA
CTCTGGTAGAAGAACCTTTGTATGACTGCTTATTGTCTTTTGTGTATTAA
TGGCATCCAATGTGACAACTGTTATTGGCGGGATATTCATATAGATAGAC
TATTAAGAGGCTGGCAAAAGCGAGACTTAACTTACCAAGTCCTCACAGAG
CTACATAGTGCAGTACTTCTCTCCAGGGCCTCCACTCGTTCCTAGGTTCT
TGTTGAGGATTTTTACTTTACAAGTCAAACTAAGTGGCATATCACGGTGT
ATGTAGTATGTTTATAAGTTAATGAATGAGTATAGCACTACATGCTGTTC
ATAAGGTGTAAGCTTGTTAAATGATAATTCTTGAGAGAAGTAGTGCAGGG
CCCAGTGAGCACTTTGCTTGTGATGGTAAATTGACATTCCGCATAGATCA
CAACTTAGAGGCTGATGTTTAGTATGATATTAAAAGCAAGTTGTTCAGAC
TATAGTTGATATCAAATAATCCCATGCTACTGTAATAAATGGAATGTTTT
GTAGAGTCTGACAATATCAATTTTTTCCTCTTTTCACCATGAAAAGTCTG
ATTAGTTACAGAATCTTCATGGAAAAGCACTCACTCGCAACCTGTAGAAA
ACTGGAGTATCTGTTTATGTACTTTCAATTTTACTTTTGAGTCTGAAGGC
TAGAGTAATTTTATTTTTTGCTAGTACAGAAAGATGTCAAGTGAAAATAA
CATAATACAAATTACTCAAGTGAAAGCTTAACATGGAATATCTAGTCATG
CTTTCCCATTAAAACAAATATTAACAATTTCTTACTGGCAGATCTTGGGG
CCTAATAGCGGCTGGCAGCCCATACCACTAACTGATGTGATAACTGCTGC
TGCTGTAAAGAAAGCTTACAGAAAAGCCACTCTTTGTGTTCACCCTGACA
AATTACAGCAACGGGGTGCTAGTATACATCAAAAGTACATATGTGAAAAG
GTTTTTGATCTTCTCAAGGTACAGATTACTTGTCTTCTGTCCCGTTCTCA
TGTTTTCATTTGCTATGCTAATATACCAATTTTTTTCAACTACTTGGTTA
GTGAGCTAAATTGGTCACTGAAATTTAAGAAATGTTGTTGCTCAACAAAT
TCCAAAATCGAGCTTGTAGTGGACCTTAACATTCTTTATCTTTCCACACC
ATCAGTTACATTATCACCTAATAGACAGATTATATATTGCTTCGGTGTCA
TTTCTTTATTTGGTTTGAGAATATTACTGACTCGTGTCCTTTTGTACTCT
GCAGGAAGCATGGAACAAGTTCAACTCAGAGGAGAGATAGACAGGCTTTC
ATCTGCGTGTACACAGTAGCACTTAAGT

Sequence Length:

8478

Sequence Checksum:

0d848e075447a9ea4ab9e938eb01c734

View location in JBrowse:

DCARv2_Chr7:32025418..32033895+

Cds:

>DCAR_025958cds ATGGAAACTATCTCACCTCCACTTCACAAAAAAAGCTACCGCTCCGGCAA TGTCGCCGCCGGGAAGACGCCGTACGACGACGTTTTCGCGGCTCGGCCGA AGGTCAAAGTTCCGACTCTCTCTCCTCGCGACGAGGACTACTCCGAGATT TTCGAGGTGTTTCACGCTTCCCGAGGCTCTTCTATTCCTGTGCTTGATCT TCCTGCTGTTGGTGAAGATGAGGATCCTGATGTTTACTTTGATGTTCGGA GCTCAGGGTTTGACTACTCCGAAGTTTTCGGGAGCTCTAACGGTTTCGAT TTCGCGCTGTACGAGCAGCTGTTTCAGCAATCCAAAGCTGATAATGATTC GTCTAATGAAGTTTGGACTCCAGCTCAAAGTGAATCTCTCTCAGATGAAT CAGATCCTTCTGGTTGCTCTGAAAAGAATCAAAGCTTGTCAAGTGGAGAT ATACACCAGTCATATGATGATACAAAGCAGTTCAACATATCATATCACAA GGCCAATCCAAAAGGCAAGGATAATATATTAGATGCGATGACACATGTTA CTCAGTTAGATGCTATTCCTGGATATAGCTTCATTATCAGTGACACCTCA CCGTCGAAACATGTAGAAGTTGAAAGTTTACCCGTGCAGATTGAGAGGAA CACAGATTGTGGTGGAGCAGTTACAGAAGGAAAACGACTTAGGAAAACAG TATCACAACCCCCGATCAGTGATATTGGTTTACAAGGTTGTAAAACCGAA GCCAGTGTTTTGGCTCACAATGACAAATCCAGGTCTCCAGGGAAGGCATT TATATCTGTGTCTGATGTAAACCTCAGGACTCGACCTTCTCATTTGCCAC CCCCCTCAAGACCACCACCCTTGTTTGCTGACAGAGCCGAGAACTCCAGT AGACTAAATTCGAAATTCAAAGCTTCCAAAAGTTATGTATTTGAAAGGAC AAATGCTGGCGATTCACAACCTTATTTTGACGTGGAAATAGATGCAAGTT CGTCAGCTGCAGCATCTGCTGCGGCTGTAAAAGATGCAGTGGAGAGAGCT CAGGAGCAACTAAGTAATGCGAAAGAAATGATGGAGAGGAAGAAGGATGG TCTCGAAAACCGTACAAAGTCACATTTCAAGAAGGATATAGGTCAGAGGG GTGAAAAGAACATCAAATTTGATATGTTGAAAAGTTCTAAAGGTGACATA TTTTCTCCTAAATATGCAAGAGAAGGAAGTGAAATTAAAACTTTTGCTGA AGAAAATGAAAAAAAGGCGAGGAACATGATCCATGTTGCCTCAAGTGCAA CAGAAGGAAAAGAAGATATACACAGTAAACAGGGGAAAGAACATATGCAG TCTCAAGTACCACATGAAACTGAAGGAACTGTTGCATGGAGAGAAGCAAC TCAATTATATGAAGTGGTCGAAGAAAAGAAAATTAGTGAGGCATGTAGAT CAGCAGATCATTCAACGTCTAGTGACTCTGGAGTTGGTGAAACAGGTATT GCCACTGCTGTTGAGCTACAAGAATGTCAAATGCAAACAAAAGCAACCTC GGCGGACCATGAATGTCAAGGAAATGTGGAGAAATTTGAAGTGTTCAAGG GTGGCCATGAACAGGTAAAAATTAAAGCAGCCCAAGGATCAATTTGGCAG GAAGAGCATCAGGAGAAATCAAAATTGGCGCAGATGGGTGATGAATGTCA ACATATGGACAAGGAAACCAGAGGGGCTTTACAACCTGGAGAAACAAATG ACAAAGCAAATGCGGTTGATAAATATGAGAATGATGATATCGGGACACAA GATCAGTTAGAAGAAAATGAGGTGATTTTTATACAGAAAATTGTGGGGGC TAATGAAAGCTATGAAAAGGTAATCGAAATTATGGAAGCTCCTGAACGGA AAGGTAGTGGAATGGAAAGAACTGCATCTTTCGACAGCATTGAAAATACA ATAAAATTTAGCGCAGATGTTAAACAAGAGCGAGGAAAATTCAATGAGGC CACAAGGCAGAGTGCCAAAGACAAGCTGGAAAAAGAAGTTTTTGAAAATC ATGGAAATGAGAGTAAACATGTGAAGACTTATGAAATGGGACAGAATAAG GAAAAACAAGATGAAGTGGCTGAGTGTAAGGGAAAAACAAATCAATTGGA AGAGGTTTTTGAGCAAGAAGAGAGCAACAATAGACTAGGAGTTGATCTTA AATGGCAAGAATGCAAGAAAGAACAGAACTTTGTCAGTGAAGCAGAAAAG ATTGAGAAGGGTTCTAAAATTACTATTGAGCAGTGGCAGAATACAGAAAG AGAAGAGAAGGCTTCTGAAGAAGCGGCAAGTGAGGAGCGGCCAAATGATT TGAGTGAACAAGATGAGACTGAGAAGAGACTCAAAGAGGCCTGGGAGAAG AAAGAAAAATGGAAAAGATCACGCGAGGCTCGTGAAAGTGAGAAGAGGGT AGAATTGTTGTTTAAGGAGGATGAGATAATGGATAGATCAAGTGAAGCCA ATGTGTGGATCAAAGAAGGAAAAGGCGAAGGATTTATTGAACACGACATT GTTCAGGAGCAACTTATGAGGGTAGTAAGCGATGGGATACTGAATTTGAA CCAAGGAAACTATACTACAATGGAGGAACCCAAGATATTTGATGGTGGAA GCGGGCATATTCACGAGCCTTCTGTGCCCGTGGAAAATGAAAGCTTAGAA ATGGAGCACAAAACTCATGAAAGGGAAGTTGAAGTTAATAATGAGCCCCA AGAAGCAAATGTTAACTCTAACCTGGATCAAAATGGCTTGCAATATGAAG GAATTAATGACAAAAATAAAGACGAGCCACTTTGTCAAATTGGCATCACG GATATGTATAATGAAGATGGCATTGATCAAACAACAGGAATACACATTAA GAAAACTAGTGGAACTAATGAAATGGCTTCTGATATTGAGAATGCAAACA TTTCAACGCATACACGGAGAGAGGCAAGGAGGAACTTCAAAGGTATCCAA CCCGACCAACACGCTTTTAACCAGGCAGAAAATGAGGATAAATTCACGGC ACCTCGAGTGGTGAAGAAGTCCGTCGAAAATGAAAGAAAACCGGGTAATG TTCTGCCAGCTAAAAAGTTTACTAGCCAAAATCCAGAAGTAGAAGAGACT AATTTTCAAAAGAAGACTAGATTAGAAGAAAGGGAAAAAGAAAGATTAGA AAAGGAAAGAGATCTGGAAAATGATTTCTTAAGAAAGCTAGAAGAAGAGA AAGAGAGAGAAAGAGAAAGAGAAAAGGATCGCATGGGTGTTGATACAGCT ACTCGTGAAGCTCGTGAAAGGGCATTCGCTGATACTAGGGAAAGGGCAGA AAGGGCAGCAGTTGAAAGAGCAACTGCTGAAGTTCGACAAAGAGCACTGG CAGAAGCCCGGGAAAGATTAGAGAAGGCATCTGCAGAGGCTAGGGAGAGG CTAATTGCTGATAAGGCTTCAGATGCCAGGCTCAAGGCTGAGCGTGCTGC AGTAGAAAGAGCAACTGCTGAGGCTCGAGAACGTGCTATTGAAAAAGCAA AGGCTGAGAAGGCTTCTTATGAGTCACGTGACCGAGTAGAGAGACCTGTG ACTGACAAATTTTCTGCTTATTCCAGGAATGGTGGATTCAGACAGTGCTC TTCATCCAATGATCTTCAGAACCTGCAACATCAGGGGATGGGGCCTTCCC GTGATTTGAAACATTCGCACTCTTCGGTTTCTGGTGGACTTGAAGGTGAA TCAGCTCAGAGGTGTAAAGCTCGATTAGAGAGATATCAGAGAACAGCTGA GCGTGCTGCAAAAGCTCTGGCGGAGAAGAATATGCGTGATCTTATAGCTC ATAGAGAGCAAATAGAGAGAAGTAGACTCGCAGAATCCCTGGATGCTGAT GTTAAACGATGGTCAAGTGGGAAAGAAGGGAATTTGCGTGCTTTGCTTTC AACATTACAATATATCTTGGGGCCTAATAGCGGCTGGCAGCCCATACCAC TAACTGATGTGATAACTGCTGCTGCTGTAAAGAAAGCTTACAGAAAAGCC ACTCTTTGTGTTCACCCTGACAAATTACAGCAACGGGGTGCTAGTATACA TCAAAAGTACATATGTGAAAAGGTTTTTGATCTTCTCAAGGAAGCATGGA ACAAGTTCAACTCAGAGGAGAGATAG

Pep:

>DCAR_025958pep METISPPLHKKSYRSGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEI FEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFD FALYEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGD IHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTS PSKHVEVESLPVQIERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTE ASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSS RLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERA QEQLSNAKEMMERKKDGLENRTKSHFKKDIGQRGEKNIKFDMLKSSKGDI FSPKYAREGSEIKTFAEENEKKARNMIHVASSATEGKEDIHSKQGKEHMQ SQVPHETEGTVAWREATQLYEVVEEKKISEACRSADHSTSSDSGVGETGI ATAVELQECQMQTKATSADHECQGNVEKFEVFKGGHEQVKIKAAQGSIWQ EEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQ DQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENT IKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNK EKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEK IEKGSKITIEQWQNTEREEKASEEAASEERPNDLSEQDETEKRLKEAWEK KEKWKRSREARESEKRVELLFKEDEIMDRSSEANVWIKEGKGEGFIEHDI VQEQLMRVVSDGILNLNQGNYTTMEEPKIFDGGSGHIHEPSVPVENESLE MEHKTHEREVEVNNEPQEANVNSNLDQNGLQYEGINDKNKDEPLCQIGIT DMYNEDGIDQTTGIHIKKTSGTNEMASDIENANISTHTRREARRNFKGIQ PDQHAFNQAENEDKFTAPRVVKKSVENERKPGNVLPAKKFTSQNPEVEET NFQKKTRLEEREKERLEKERDLENDFLRKLEEEKEREREREKDRMGVDTA TREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARER LIADKASDARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPV TDKFSAYSRNGGFRQCSSSNDLQNLQHQGMGPSRDLKHSHSSVSGGLEGE SAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDAD VKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKA TLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER*