DCAR_003115 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_003115

Identifier:

DCAR_003115.gene

Locus Tag:

DCAR_003115

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 3 relationships.
Relationships
The mRNA, DCAR_003115, is a part of gene, DCAR_003115.
The genetic_marker, MK016739 1_35891247, is located in gene, DCAR_003115.
The genetic_marker, MK005710 K3154, is located in gene, DCAR_003115.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_003115	DCAR_003115.mRNA	mRNA	DCARv2_Chr1:35883999..35892193

Sequence:

ATGGTGAATTCGATGGTGGAGAGAGCTACCAGTGACCTGCTCATCGGCCC
TGATTGGGCCATGAACATCGAGATCTGTGATATCTGCAATCGCGATCCTG
TGTATGTATTGTATTTGTGTGTTTGTGTATTTGACTTTGTTTTGTACTGT
TTGATTTGATTTGACTCTCACTTTATTTACTCTTGGACTTATTCATGTGT
CAATTTGATTAATTGATTGAAAAATTGTGTGTTTCTGGAGGATCTGATAG
GTAGATGCTTTGTTTTGTTTGGTTTAGATGTTGCTGATGATAAAAAGGCT
TAAATTTAACCTAGTTTTAGAATGCCTAAGATTGTGGTTGTAGTTGTAAT
TGATATCAGAGGATTTGTTAATGATATAGACAAGTAAGGTTTAGGTAGTC
ATTCCAGGAACCCTATGCATCGAGATAAGAATATATTATCGGTAATGGAC
CATAATTTGATTAACAAAGTGACTATATAAATTATGGCGGAAATATTGCT
ACATGTGTTCTTATGTGATATGTGTGTCTATATAATTTTGTAATCCTAAG
AGCATAGTTTTAAGAGGGAAATGCCTTGCTTCTTCTTTTCAATTGATCAC
TAGAAGACCTTTTGTTGACTTGTTTTGTTACCTCAAATGACACTACTATA
GTTTACTACGTTAGTCTCCATGGGCCTGACGATTCTCATTAACTCTGTTT
GACAAGTGGGCATTTAGTGGACTTGTAGGAAGACAAGTGACATACTACAT
ATACATCGAATATACAGAAGCCGTTTTAAGTACACTTTTTGCACTTACAG
TTTATTATGCTATGAACTGTTGCTGCGTGTTTAGTTGATAGAAATCTTAT
TTAGCAAGCTGTCCAGGGTACTTGTTGATAGTAGGTTTTGGATTCCTAGT
TCCACACAATGTGCTTTCCTGATGTAGCTTAGTAATTATTGCATCCTCGG
TCATTCACACTTCTATTGTGCCAAATAGCAACAGAGTAACACCAGTGTTA
TCCCTATATAATGCAAAGACTTCAATCCTACCTTTTCTGTTTCTGCTGTG
ATGTTTATATGTCCTTTACAGTTATTTCACTTCTCTGTCAGCTAATTTTA
CAACGTAGTTATCAATAGTGTGTCTATTGAATCATGTGGGTTTGAATCCA
AACTTCTCCTCAGGAGGAAATATGTATAGACAGATAAAGTTGGACCTTTA
TTAAATATTATTCTCTTTATTTTGAAAAGGCAAGCAAAGGATGTTGTAAG
AGGCATAAAAAAGCGTATCAATAGCAGGAATCCTAGAGTTCAACTTCTGG
CCCTAACAGTAAGCAAAGTTTTTTTTTGTTTTTTTTATTTTTTAAATTTT
GTTCAGTACTGTCTTATTTCTTTTGGCAAAATTTTCAACTTCGCTTGATC
TGTTGGTTGAACTAATATATGAGTGACTATATTAAATTTGGCCTAGAAAT
TTTATACAAATACTCCTGAGATTATTTGCTATAGATAGATCTATGAAGTA
CTAAACTTTATTCTGATCTCATTATGGAGTCAATTAATGTGTCATTCACT
CCATGTATCATGTTTCAGCTGTTGGAAACTATTATTAAGAATTGCGGGGA
TATTGTCCACATGCATGTTGCTGAGAAAGACTTGCTTCATGAAATGGTTA
AAATTGTGCGAAAGAAGGTATGATTAATGATAGAAGGTTCTGTGGCTTAC
TTTGCATGTGATATATAGTCTCGCAATACTGTAAACATGTTTTATGTCTT
CCCCCTTTTCAGCCTGATTTTCATGTCAAAGAGAAGATATTGGTTCTGAT
AGATACTTGGCAAGAAGTTTTTGGAGGAGCAAGAGCAAGATATCCACAAT
ACTATGCAGCATACCAGGAGTTGTTGGTGAGTAATAAAAGATTGTCTTAA
AGTACTCTGTCTCACTCACAAATAAATTAATGAATGTTAATGTTTAAAAT
ATGTCATGCTTATGTTTGTAGTGGTTTATGCAGACCCTTTGTTTTCGTTC
TCTACATTCACCGTTTTGTTTTCACACCTTTAAATCCTCTTATCGTTTCT
TGTATTCTACAGCGTATGGGAGCAGTATTTCCTCAAAGATCTGAGAATGC
ACCAGTTTTTACACCTCCTCAAACACAACCTCTCTCGTCGTATCCACAGA
ATCTGCGAACTTCAGAACCTGGACAAGAAGCAGCTGAGACTTCTGCAGAC
TCTGAGTTTCCGACATTGAGGTACACTGACACTGCTCAACTCTTTTATGA
ATTTTTGCAAAGACAAATTTTTGCAAATTGTTAAGTGCAAGTCTTCTTAA
ATAAATAATTATCTCATATATCCTCTCTACCTTGTTTGCCCATGCTTGTG
TAAGTTTTTTCTTAAAGTTTACAAGGTTTTTATATTGGTTTACTTGTGCA
CAACTGATTAGTTACTGAATTACTTAATAAATTGGTTCGTTGTGTTCAAC
TTTAGCATCGTTTATATTCATGTGCTTATATTTACACACTCTCAGTGAGC
GTTATTCTTTTTCTGAATTAAAGTTGCACTTAAATATTGGCTTAGTGTTT
ATATGCATATTTTTGTAACGCAAGTTTGAATTTCATGAAGACAGAAGATT
GTGGTCAGTATTGCCAGCCCCTGTTGATAAGCTTTATCTCTTTGTTGCTA
ATACTATAAATTCTCTGTTTCAATTTTTTTCTTCTAGTTTGACAGAAATT
CAGAATGCACGTGGTATTATGGATGTTCTTTCAGAAATGTTAAGTGCGAT
AGGTCCAGAGAACAGGGAGGTAAATTAGCGGCATTATATAGTTCAGTTAT
ATTACTTTTTCTGTGATTTCCATCAATTTTTTTTGCAGCGGTGAGGTAAT
TCTTGTGCTTTACAACCTTAGAAAATAAGTGTGTAAATTATCTGGTTTAC
CTCACTGTGACAAAATCTTCCTGCGTGGCACCAATAGTTTTCTCTTTCCT
TATTTTATGAAACATTAGTGTGTCTTATCGCACATTCTAAATCTTCTCTA
TGCATTCAGGGGCTTAAACAAGAGGTCATTGTTGACTTGGTTGAGCAGTG
CCGCACATACAAACGAAGAGTGGTACACCTTGTTAACTCGACTTCGTAAG
GCCTTGATTTACTTTTACTATCACCTACTATGTGCATATTCCTTTTATAT
TGTTATTGTTAATTATTTGTGGATGGAAGATGGTTTATTTTAACTGTTCA
AGCTACAAGGCTGTTTAGAGAAAGAGGTGCCCTCATATGACAAAATTATT
TTAGATATTTGAACAAATATGCTACTCAATTTGTCTTCCATAAGAACTTC
CGCTTTGTAGTCCATGTAGTAGCGTATGAAGTGGTGTCGGAACTTTTAAT
GGTACTCCATTATTGTGGAAGTATATTTGAATGCTGCTTCTATCATTGTG
GTGCTTAAGGTTGTTGTTTCAAACCATTGTGTTCTTTTGTAACGTACGTT
GCAATATTTGACCTTCCGGGATCATAAAATTTTACTGAAATGGATAAATA
ATTTGAAAATTGATCTGAAAAGATTGGTTAGTCATTAGTATATGGCCTTC
TTTTCCTGTGTTATAAGTTTCTTGTTTATTGGTAGTCTGTTTTCTGTAAG
GGAGTAAAAGAAAAAAACTCTAGACAGTGGGCAATCAATAAAATGGGAAA
AGTTTGCTACTTCTGATGCACATTTACATTATCATACACGGTGGGTGAGT
GTTCCACCTACCTTCATCGGCATAATGTTATTATCTGATTTAACATTAAG
TAATACCCCGATTCATTTGAGTTTTTTTTTCCTGACTTTGAACAAGACAT
TTTTGAGATAATTACTGGTAGCACTAATCTGATCAATGACAATTATTGTT
CGTAGAAGCTTCCAGGTTCACTCTCTCACTGTCAAACTTTTTCACTACAA
ACTTTGCGTAAGCCCATTCTCTTCTATGTTTGAGAAACGGGCTAAAAGTG
TTCAAGTTTAGTTGTACCCAAATATTTCCATTTAAGTCTCAACTTTTTTT
CTTACTTATCACATCACAAATCTCTCGATTTTACCCGGGCTAAGGCCTAT
ACCGCTTGATGCTTAATTGTACCTTTCAGTACACTATCATCCTAAGCCTT
TTCATCAGAATCTGTTAATCTTTAGCTCTCTACTGTTGATTGTACATCAT
GTTAAATTATAGATATCGATTGTCGGCACTCGGCAGTACTCTTGGTCAGT
TTTTCATGAATTAGATGTTAAATTATAGATATCTAGTTTCTATTTTTTAC
TTCTAAATTGGTTTCTATTTGAGAAAACACACACACACACACACACATGT
GTGTGTGTGTGTGTGTGTATTATACTATACATAAGTGTTAAATTTTAGCT
GTGTAAGTGTTAAATTGTTTGTGTATATTATGTAATGATTAATATTCTAC
ATTAAAATCAAATTTATGCATAAGTATCATCATTTTGAAAATTATTAATG
AGTTTTTAAAGTAGAAACAAATGGTTCTCTACGGGACTCTATATAAGATG
GTTTCCTATGAAAAAATGGCCTATTTATATATAGTCTTACTCTAATACAA
ATCAAATTAGCTTAAAAACTAAAAACCAGTGTCTGACCTATTTTCAATCA
CTATTTATACTACAGAAATAATTAATTTGTACATCACAAATCACTATCTT
ATATATAACTTATCTTTCACACACACACACACACACACAACGTACATGAT
CATCATCTTCAGCCGTACTGCAATAATGGACCTCTTGCCACTATTATCAA
CACCTTTTGTGACTTGCCACGATCGCATACCATCACTAATAGTCACCGCC
GCTTGCCACCATAACTTGCCACAACTGGTGTCTACTTGCAATTATAAGAC
ACCTCCTCTCATCACTTTCTACCATCATGGACCTCCAATAACTACAATTG
ATCTTAAACAATCGACCATCAATAATTGACATAAGTAGATTTTCTAAATT
ATGAAAAATAAAAATAGCTGATTTTATTATATAACATAGTGATTGATGCC
GTATAAACTAGTGATTCACGTAGTTGTAAATAGTGATTATGGAACTCCTA
CGACTACAATTGATCATAAACAATCAACCACCAATAATTAACATAAGTAG
ATTTTCTTATTTATGAAAAATAAAAATAGCATATAAAACAGTAATTAATG
CAGTATAAACCAATGAATCTTGTAGTTGTAAATAGTGAATAGTGATTGTG
GAACTGGTTTGTAGTTTGTAGTTAATGATTGGTTTGTATTTGATTATTAG
CCTATATATATATATATGATGATGAGTTAGGCTTTGGGCTCTATGGAGAC
CCAACATATGTGAAGTCCTTGGAGCCCACTAATCTACCCATCAATAAAGA
AACCAATCCTACGGTCATGAATTGAAGGCCCAGTACTATGTTTTGTTTAT
AAAAAAAATAAGTATGCAATCTAAATACAGTACATAACTATAAGCCCGCA
TCACTTCTCGACATTTACGACTGCTGTAGTCTGTAGACATTTGTGAAAAA
TATCAAAACCCAATCAATGAGTTAAAATCAAAATGTCCTGCAAGGAGATT
TTTTTGTGAAAAACATAAATCTAGTTACTATCAATAATGTACACATCTCA
ATTAGCCAAAAATAAATAAATAAAATAATGTACACATCTCTTGAAATAGA
GTTTACTTGAAGATCCTGCAGAATGAGTTCAGGTCTGGTCCGTCTGGATC
ACTTTTTCATTTAAAATTGCATTACTTATCCTCTTTAATTTTATTATTCC
ATAGACCAGGAAATTGTGGCTTACAAATGATAAAATAATGATAAACAGAT
GAAAGCATGCTGAAGATAGACAGATGAAAGCATCGAGAACACAGAAACAA
TCGATTTGATACACACGTAGAATACATGATGATAAAGGACATAAACGAAG
CCCTGTAATATTGCAAAACAACTTAACTGCTATGGGTACAATTTTGTTAT
GCAATGTATAAATTTTTTGTAGGCAACGTATGCAATCTATAAATGTGTTT
CTGTTTAATTAAATTTTAAAAAAACAAAGTAATGCACATTTTTAGATTAG
ATCAGGATGGAAGGTCTAGATCTTGAACTCCAATACTCTAATATAGTTTT
GGACTCCATAGAACTTGGTCGAAGATAGATATATAACATTCTGAACAAAT
GTAAGCATTTTTATGTATTCATGACCTCATTTCCAAAGAATATTTGTGCA
AAATCATCTACATAACACCAAATCTTGAATAAAGGTTAGAGGCCACATTG
AACAGAATCCTAATATAAATTCTTCTGTTACTGTGTGTCTGTTGTTCGAT
GATTTAGAGATGTATAGTAACAAAGTGAAACTGTTGCGCAATATGAATAT
ATATACCTCACTAAATTTTGAATTTGCAGGGATGAATCTCTGCTTTGTCA
GGGTTTAGCATTGAATGATGACTTGCAGCGGTTGTTGGTTAAACATGAAG
ATCTTGCTTCTGGAGATGTAACAGAAAACACTAAGCCTGAATTAACACGA
GCAATTGTGCCAGTGGATGCTCCTCTAATTGATACAGGCGATACCAAACA
GAATAATGGAGGGTAATATATTTTGTAAATATTTCCATTTGGCATTTGCA
GCAATAACTATTCTTATTTGAAAGTCCAGGGCACATAATGTTTATCTCTG
AACTAAATCAGTACAAATGACATTTGAAGTTAAATTATTTTATCAACTAC
CCTTCCAGAGTGTTACCCAATCTTTTAAATTCATAGAACTAAATAGTTGC
CACTGTCAATCAGTTTTTTATTAATATTAAACTGTTTACCCTTTTTGTTT
TGTACTCACGGGTCATTTGCTTGATAGTTAACTTGCACTTCCAGATTTAA
TGGTTGCTTCCATATAATTATTTTTATTCAAGTTCTTATGTTGTAATTTT
GCATAGTTTTTTCCAAACAATTTTAATATATATATACTGATTGACTTGGC
AGATCCACCTCGAGTGCTGTTGCTGGGAAACAGTCACTACAGTCTACTCC
TGCTAGCAATGGCACACCAAGCATATCTGCTAATGCCAATACTAAAATGG
TGGACCTTTTGAGTGGAGATGATGACTATTCTCTAGCTCTTGTTCCAGTC
GGGGAGCCTCAGCCAACTGTTCCCGTGTCTCAGCAGAATGCCCTAGCACT
TGTTGATATGTTTCCACAAAGCAATGCATCGACACCACAAACGTATCCTT
CAACACCCCAATTGCAGCAGCCCCAGAATTTTCAATCTTCACAATCTTCA
ATTTATCCAAATGGAAGTATCCCTAGTAATGCACCACCACAATATGGGCA
GTCCCTCTATGCTCAAGACAGGAATCCTGTCTGGAATGGCCAGATCCCCC
AACAGCAGCAGCAACAGCAACAGCAACAGCAGCCACCTTCACCAGTATAT
GGTTAGTACAATACAGTTACAGGTAGATGTCCACTACTCTACATTCCGTT
ATGTCCACAATTAGCAATTACCAGGTTTTCTTCATCTGGCTTGGTTTTTG
TGAATTGTGCTTGTGAGAATGTAGATATAGAGGATATTGCTGTTGAGCTA
CATCGAAATTTGAAACGTTTACACTTGGCTCTTCCACAGGTTCATTACCC
CCACCACCTTGGGAAGCTCCTCCAGAAGCAGATAATACCCCTCCAAGTGT
GAATTCATACCAGCCACCGATGCAATCTTCTTCCGCAGGGGTTGCACATT
CCCAGCCGATGCCAGGTAACGTGAATTCTCAGGTCTATCAGCCTATGGGA
AATAATCAGGGAACAGGCATGTACGCTCCGCCAATCAATGGAGGAAATCT
TTCAGGATTTAATAATCAGAATATGATGCCCAATCAAATGGCAGGGTTTT
ATCCTCAACAAATGCAAGGAGGTCAATCGATGGCTATGCATCCCCAACAA
ATGCAGTATGGGCAAATGGGTTATATGCAACCTCAGCCAATGTATAACCA
GATGCCAGGGTACGGCCAACCAACCGGCTATGGCTATGGATACGGGTATG
GCCAACAACAAAACAATCAGTTCCTTGAACAGAAAATGTCGGGGTTATCT
GTCAGAGATAATGGTGGGCTGAGTAGTTCAACTTATCAGAGTGCTTCATC
ATATGTACCATCTGGAAAACCTTCTAAGCCAGAGGATAAGCTATTTGGCG
ACCTAGTAGACATTACAAAATTCAAGCCTGCGAAAACCATGTGA

Sequence Length:

8194

Sequence Checksum:

ffabca65b04627e8f2b005509f3b0cda

View location in JBrowse:

DCARv2_Chr1:35884000..35892193+

Cds:

>DCAR_003115cds ATGGTGAATTCGATGGTGGAGAGAGCTACCAGTGACCTGCTCATCGGCCC TGATTGGGCCATGAACATCGAGATCTGTGATATCTGCAATCGCGATCCTG TGCAAGCAAAGGATGTTGTAAGAGGCATAAAAAAGCGTATCAATAGCAGG AATCCTAGAGTTCAACTTCTGGCCCTAACACTGTTGGAAACTATTATTAA GAATTGCGGGGATATTGTCCACATGCATGTTGCTGAGAAAGACTTGCTTC ATGAAATGGTTAAAATTGTGCGAAAGAAGCCTGATTTTCATGTCAAAGAG AAGATATTGGTTCTGATAGATACTTGGCAAGAAGTTTTTGGAGGAGCAAG AGCAAGATATCCACAATACTATGCAGCATACCAGGAGTTGTTGCGTATGG GAGCAGTATTTCCTCAAAGATCTGAGAATGCACCAGTTTTTACACCTCCT CAAACACAACCTCTCTCGTCGTATCCACAGAATCTGCGAACTTCAGAACC TGGACAAGAAGCAGCTGAGACTTCTGCAGACTCTGAGTTTCCGACATTGA GTTTGACAGAAATTCAGAATGCACGTGGTATTATGGATGTTCTTTCAGAA ATGTTAAGTGCGATAGGTCCAGAGAACAGGGAGGGGCTTAAACAAGAGGT CATTGTTGACTTGGTTGAGCAGTGCCGCACATACAAACGAAGAGTGGTAC ACCTTGTTAACTCGACTTCGGATGAATCTCTGCTTTGTCAGGGTTTAGCA TTGAATGATGACTTGCAGCGGTTGTTGGTTAAACATGAAGATCTTGCTTC TGGAGATGTAACAGAAAACACTAAGCCTGAATTAACACGAGCAATTGTGC CAGTGGATGCTCCTCTAATTGATACAGGCGATACCAAACAGAATAATGGA GGATCCACCTCGAGTGCTGTTGCTGGGAAACAGTCACTACAGTCTACTCC TGCTAGCAATGGCACACCAAGCATATCTGCTAATGCCAATACTAAAATGG TGGACCTTTTGAGTGGAGATGATGACTATTCTCTAGCTCTTGTTCCAGTC GGGGAGCCTCAGCCAACTGTTCCCGTGTCTCAGCAGAATGCCCTAGCACT TGTTGATATGTTTCCACAAAGCAATGCATCGACACCACAAACGTATCCTT CAACACCCCAATTGCAGCAGCCCCAGAATTTTCAATCTTCACAATCTTCA ATTTATCCAAATGGAAGTATCCCTAGTAATGCACCACCACAATATGGGCA GTCCCTCTATGCTCAAGACAGGAATCCTGTCTGGAATGGCCAGATCCCCC AACAGCAGCAGCAACAGCAACAGCAACAGCAGCCACCTTCACCAGTATAT GGTTCATTACCCCCACCACCTTGGGAAGCTCCTCCAGAAGCAGATAATAC CCCTCCAAGTGTGAATTCATACCAGCCACCGATGCAATCTTCTTCCGCAG GGGTTGCACATTCCCAGCCGATGCCAGGTAACGTGAATTCTCAGGTCTAT CAGCCTATGGGAAATAATCAGGGAACAGGCATGTACGCTCCGCCAATCAA TGGAGGAAATCTTTCAGGATTTAATAATCAGAATATGATGCCCAATCAAA TGGCAGGGTTTTATCCTCAACAAATGCAAGGAGGTCAATCGATGGCTATG CATCCCCAACAAATGCAGTATGGGCAAATGGGTTATATGCAACCTCAGCC AATGTATAACCAGATGCCAGGGTACGGCCAACCAACCGGCTATGGCTATG GATACGGGTATGGCCAACAACAAAACAATCAGTTCCTTGAACAGAAAATG TCGGGGTTATCTGTCAGAGATAATGGTGGGCTGAGTAGTTCAACTTATCA GAGTGCTTCATCATATGTACCATCTGGAAAACCTTCTAAGCCAGAGGATA AGCTATTTGGCGACCTAGTAGACATTACAAAATTCAAGCCTGCGAAAACC ATGTGA

Pep:

>DCAR_003115pep MVNSMVERATSDLLIGPDWAMNIEICDICNRDPVQAKDVVRGIKKRINSR NPRVQLLALTLLETIIKNCGDIVHMHVAEKDLLHEMVKIVRKKPDFHVKE KILVLIDTWQEVFGGARARYPQYYAAYQELLRMGAVFPQRSENAPVFTPP QTQPLSSYPQNLRTSEPGQEAAETSADSEFPTLSLTEIQNARGIMDVLSE MLSAIGPENREGLKQEVIVDLVEQCRTYKRRVVHLVNSTSDESLLCQGLA LNDDLQRLLVKHEDLASGDVTENTKPELTRAIVPVDAPLIDTGDTKQNNG GSTSSAVAGKQSLQSTPASNGTPSISANANTKMVDLLSGDDDYSLALVPV GEPQPTVPVSQQNALALVDMFPQSNASTPQTYPSTPQLQQPQNFQSSQSS IYPNGSIPSNAPPQYGQSLYAQDRNPVWNGQIPQQQQQQQQQQQPPSPVY GSLPPPPWEAPPEADNTPPSVNSYQPPMQSSSAGVAHSQPMPGNVNSQVY QPMGNNQGTGMYAPPINGGNLSGFNNQNMMPNQMAGFYPQQMQGGQSMAM HPQQMQYGQMGYMQPQPMYNQMPGYGQPTGYGYGYGYGQQQNNQFLEQKM SGLSVRDNGGLSSSTYQSASSYVPSGKPSKPEDKLFGDLVDITKFKPAKT M*