DCAR_027192 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_027192

Identifier:

DCAR_027192.gene

Locus Tag:

DCAR_027192

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 6 relationships.
Relationships
The mRNA, DCAR_027192, is a part of gene, DCAR_027192.
The genetic_marker, MK018931 8_25306829, is located in gene, DCAR_027192.
The genetic_marker, MK009849 8_25309887, is located in gene, DCAR_027192.
The genetic_marker, MK018932 8_25310322, is located in gene, DCAR_027192.
The genetic_marker, MK007900 TP22150, is located in gene, DCAR_027192.
The genetic_marker, MK007901 TP160602, is located in gene, DCAR_027192.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_027192	DCAR_027192.mRNA	mRNA	DCARv2_Chr8:25306139..25312347

Sequence:

ATGGATAGGATTCGAGATGGTAGACGAGCTGCTGCTTCCAATATTCCGAA
CGGATTATCGCGACGGCGTCATCGAACTAGCTCTTTCAGAGATTCACCTG
GTGATTATTTATATATGTCTAGCAGATCTGTGATTTTTGTGTTTTTGTAT
GTATGTGGCGTATTTATTTGGTGAATTTGTTGCAGAGGACGAAGCGGAGA
TGCATGAACCGGCGAGATTGCGAGAGAGAGGAGTGAAGAAAGATCGAGAG
AGAGATCGAGATCGAGAGAGGGAGCGGTCGAGGAGTAGTAAAAGGAGAAG
AGCTGATAGATTGATGAACGCCGCCGATGAGAGCTCTGAGGAAGACGAGA
GTGTGAATGATGAAGAGGATGAAGATGATGACGTCTCCGCTAATTTCTCC
AGGATGTTGCCGCCTCTGCCTACTCCGATCTTATCGCAGCCGTCGATTTC
GAGTAATTATAATAATCATAACAATTCGCATAGTTATAGTCATAGTCATC
ATCAGAATCTGAACCGGAAGAGTTTGTTATCGGACGGTGGTAAGATGTAT
AAAGCGGCTGTTCCGGCGTGGAAAGCTGCCGCTGATGAAATGATTGGTGT
CTCTGTTCCTAGGAAGGCCAGAACTGGTATGCTACTCAATTTTGAGTGAT
TTGACTTTTATGTGTGTTTTCCGATTGATTTGATGGATGTTTGTATGTAT
TGAATTGCTTTGATGTTTATTTGCAGCATCAACGAAGAGGTCGCATGATT
GGGTTTCTAGTGGTGGTGGAGGAGGAGAGCAGATGAATCACCGGCAAGCT
TCAAGTTCGCCGGTTAGAGGAGGAATTGCTATGTCAACGCAGTCTGGGGC
GGTTGTGAGGGAGGCTGTTCCTTTGTCGCCTCCTTCGTCTTCAAATGTTT
CGATTAAGAAGAAAATTGTTAGTAAATATTTTCATCGACTTCCTGTTGAG
TTTTTGTTGTTTGGTTTGTCTTTGTGATTTTTTAGTTACTGTTATCTGTG
TTTTCGTGTATAGAAATCTAGTGGAGGAATGAAGCCTAGACCACAACCAA
GGTCTACGACAACTTCAAAGTCTTCGTCTTCCAATAATAATCCGGAGGAG
CTGGAAATTGAGATTGCTGAGGTTTTGTATGGACTCATGACTCAATCTCA
AGCTCCTCCAAAAAATGATTTATTGTCGAAGAATGAATTTAATAACAAAT
CTAGTAGTGAAGCTAAATCTCGAGCTTCTTCCCCAGTATCTAATTCTTCT
TCAGCGGCTCCAATAACTGCTGTTGGTGAGTTGAGCTGTTAGTGAGCCAG
TTTTCTTTTGTGTTCACTTTACAGATTGAGTGATCTAAATATGTTAGTTT
TTGTTGAATCTGTAGCTCCGAAGAGGAAGAAGCCGCGACAATTGTTAGAT
AATAATTTTGTGGGTAGTTCAAGTACGCGAAGCAGTCCATCAATGAAGTT
AGAAATTGATCAGACGGCAAGGTCTGAACTAAGTCCCCCTAATCTGGAAA
GGAATTTTGGATCTGCAGCTGAGAATGGCGAATCTGCAAATTCAGGTAAA
TCTGGTGCGGAAAATAACCAACATCTATCAAAGTCTATGAAGCTGGAAGC
GGGCACGTTGTGTGAATCGGCTTTAATGGAAGAAGCTGGGGAAAGCCGAG
ATGTGGTGTCAACAACCAAGGAAGAGGTTAATTCTATCAAGAAGGATGTA
CCTGTGGTTAAATTAAAAGATGATCCCAAGGAGATGATAGTGACATCGAT
GGCAACATCATCTAATGTGTAAGTGCTTTAAATGATTTTTCTTGTTTGAT
TTCTGTTTATTTCTTTTTCTGTTAATAATTTCTGTTTTAATGGATGAATT
TTCAGGAAAACAGCAGCTCCAGCAATTGAGAAGAATAGGGAGGAAAAATA
TCAGATAGATCTGATGGTGGGTATAAAAAATGAAGATGTATTTTTTTGTT
ATTTTCTTTTTAATTATTACAATTAATTTCTATGTTGCTGATTTGGCTTC
TGAATTATACAAGTTGCTAATTACATTATTAATTGATGTAGGCCCCACCT
CCTCAATCAAGATCATCACCTGAAAGGGACAGAGCTGTTAATTTTATGGG
TGATCAAAATATGATGGTTTTTGATATGGTAAGTTATTCTGCCTGTTGTC
GGATATCCTCATCTCTGCCTTGATGTATAACCATGTAATGTATCATAATT
TTTTAGGAAAAGAAAAAAGAGATGAGCAATGCTAAAGAAACTGATAAAGT
GGGAAGTAGCAAGGAAGATATAGTGATTCATTCTGCTGAGAAAGTTGCAA
AGACGGTAATTGAAGAAGTTGAATTCCAGAAATCATTTGTTAGCAAGGAG
CGGAACATTGATCTCCAGTTAGATTTGGAAAAAACGGGTATGGACACTGT
TAGCAACCCTCAAAATGATCATGTTGTGAAATCACAAGTACAGTTCTCTA
AAGCTGCATTCAAAGAAGAGCAGCAAAATACGGACAAAAGTGGTAGGTTA
TCCTTTGGCTTTACTTCGCGAGGTTACTGAAACTGGTTTGTGACAAGTGT
ATAAATTTTTCTCCTGTGTCTCTTTTTACAGCTCAATCCATCTCTTTGCC
TTTGCCTATGTCTGTTGCTAGCTGGCCTGGCGGAATTCGTCCTCCAATTG
GGTATGTGTTGAAGATATATGCAATGCCTACTGCATTTCCATTTTTAGGG
CACTATTAGGCTGATTTTAGTATGAGATACAATGTTCTTTCTGACTGAAT
TAATTGGCTTTGTTCTCCAGGTACATAGCACCACTACAAGGAGTTGTATC
AGTTGAGGGGGGTACCATGCCTACAGCACCAGTTCAGGTACCTCAGTTTG
AACTCACTACTCTCGAGCTAGTTAATCTTTTCAACAAGTCCTCCACATAG
GCTTGTCCTTTTGTGATCAAAGTTTCTAATTGTAGCAAATTGAAAATGTG
CAGCCTCTTTTCTCTCAACCACGGCCTAAGAGGTGTGCCACACATTGTCA
TATTGCAAGAAATATTCACTATTACCAGCAACTCATGAAGATGAATCCTT
TCTGGCCAGCGCCTTCTGGCACTACTGCTTCTATGTTTGGAGCCAAATCC
TCCAATCTCAATGTTATCCCCCCTACAGAACTACACGGTAACAGTTCTGG
AAGGAGTCTGAACTCCATGCAAGACAAGGGTCATAGTCTTGCTATCTTCC
CAGGGAGTGCTGTAAAAGAAAATTTTGCCCAACCTGCTAGCATTGCGGAT
GCTGGGCATGCGAAGCAACAAATTTTGCTTCAGCAAGCTATGCCTCCAGT
ACCTCCCACTAATATGATGGTATGTTACTGTTACTTTCCTTCCCTATTTT
TCTACTTTTGAACTGCAGCTAATTATAAATCAATCATAACTCTATACATT
TTTTTTCATACTGACAAAAATTATCAATAGTAAGAACCTATCAATCAAAA
TACAGAATATCATAGTCTCAAAAAGTAACATACCTTCATAGGAAATTATG
AATCGGAATGCTATATATAATATCATTAGGGAAGATTGTAGTCTTGTACT
AATATCTTTACTGAATTTCAGCATGGCCCTGCTTTTATATTCCCCTTCAA
TCAGCAACAGGCGGCTGTTGTAGCTACTTCTGGAAGGCCTGCTTCGGTAA
AATCACCAACCACCACAGGGGGTCTACCTTCTACTGGTGCGCCAAACTCA
GCTACTGTGGCTGCCTCGGCACCGACACCTGCAAGTGCACTAGGCTTTAA
CTACCCAAATATGGCTGCGAATGAAACCCAGTACTTGGTGTTACAGAACA
GTCCATACCCATTCCCAATTCCAGCTGTTGGGGCACCACCAAATTTTAGA
GGCCATGCTCAGCCAATGCCAATGTTCAATGGATCTTTTTATCCTTCTCA
GATGATACATCCGTTGCAACTCCAGCAACAGCAAGTACCAACAACTCAGC
AACAACAGCAAATCCAACAGACTCATCAGAACACAGGTGGCGGCTCCATG
TCTTCACAGAAGCATTTGCAGTCCCAACAGCACCGTCCGCAAGGCATTGC
GATCAATGGTGGTGAAACTGGAAATGGAGTCTTGCAGAACTTTGCTGCCC
CTAAAAGTCGTTCCTCTCAGCAATCACAGCAGCATCATAATCAGCATTTA
CCCCCTTCACAAGCAAGGCAGCATGAAAGTGACGTAGGCGGTGAAGACAG
CCCATCAACTGCTGATAGTCGAGGATCTCGCGCACCAGTGAATGTGTACA
ATCAAAACTTTTCCATGCCCATTCATCCCCAGAATTTTGCTTTGATGAAC
TCATCTGCTGCTTCAGCTGGTGCTACGGTTGGCAGTGGTGGGAATCAAAG
TGAGAAGAAGCAAACACAACATCTTCAGGGTTTCAAATCAGGTGTTGAAT
CCCTTTCATCTCAAGCATATGCTATGTCATTTGGTCCCATGATTGGTTCC
ACTTCGGCTTCTGGAATTGACTTGTCTTCCATGTCACAAAATCATGCCAT
CCTTCAGAGCTTACCAGAGGCTACTACAAGGCACAGCTATCATCAGATTA
TGCAGGCAGCAGCAACTGCCCAAGCTGTTCAGCAAAAGAAGAATACTAGA
TTGTCAGAAGATGGTAAAATTGGCGGTGCTGTTGCATCCAGTGCAGATGA
AGAGAGGAAGGTGCTAACGGGCAAGGGTCCAGCTTCTAGTGGAGTACAGT
CCATTAGTTTCTCTAGACCAGACTTTGTTGATGCATCTGAATCTGCAACC
CCTAAAGATAGTGCTTCCAACAGCATGGCTCGAATGCTGAACCTTGCACC
TGGTGCTGCTCGAATGCCTAATGTTATGAATTTGGTTGGCCCTTCCAATT
CTCAGTTGCATGCTCAGTTGCAACACCAACAACACCAACAGTTGATTCAG
ATGCACAACCAGCAGCAACATCAACAGCAGCAACAACTAGCAGCTAACAT
GACAGCTCGTAGCAAGACACCATCAAGTAATGGAATTGCGTCGTCGGAGC
ACTTAACTTCATCATCAGTAGCTTCCAAGTTTCCAAATTCAATATCCGGC
TTTCCACCAAATTTTGTTCAAAGCAGCAATAACAGTAGTCCGACCCAATC
TTCGCAATGGAAAAATTCTAACAGAACTCCCACCTCCCAAGTTCAATCAT
CACTGGTCTCATCAACGTCATCCCCCAAAAATCATCAACAGCAGCAGACA
AGAACCCTTCAAAACCACACTCAAATATCCTTTGGGACAAATCAGAAACC
ATCAGCATCTCCAGGGCAACAGCATCCTAATAGCAGCCAGTCCCCATCCC
CACCAGTCGTAGTCGGATCTCCTACCCATTCTTCCCTTTCTAAAGGTGCT
AACTCTAGCCCAAGAATAAATACTGCTTCGGCAAACAAGACTGGTCAAGC
ATCTACATTGTCTTCTCAGCAGACAAAGAATTCGACATCTGTTCCGAGCC
AAAAGGCCTCTCCGGCGGGTGGGAGAAATGTTCCATCAGTTCTTGGGAAC
CCTCACAGTGCTTCTCTGAGTGCTACAACTAAAACACAAATTCAGATGCA
GCAGCTGCAACAACAACAGCGACAGCAACAACAGTTTCAGCAGCAGTTAT
CAAAGCAAACACTGCAGCAGGCAATGTTTTTTTCAAATCCTTATTTTCAA
GGCCAACCACCGAATTCTGCTAGTTCTAATACTTCAGCTGCCAGTGGTTA
TAATCTTCAAAGGAGGCAGCCTGAGCAACCACAGCACTCTCAGCAATCTC
AAGGATCCTCTCCAAGTTCTTCCGGGATGTTGTCTATGGGTCCTCCACCA
ACACAATCTAGTACCAGCACAACTGATCCTGCAAAAGCCGCTGCTGCGGC
TGCGGCCGTGGCAGCAGCCACGGCAGCTGCTAGCAGTATGAAAGGAGGTG
GTTTTTCCTCGCAGGGTATTCTCCATTCTCCCCAGTTTGGGGTACAGTCA
TCAGGAAATTCTCATCAGTCACTGCCGGTTGGATTCTCCTATGGTCACAA
CGTACCAGCTGCGGTCCAAGTGAAGCCAGCAGAGCCAAAACAGCCAACTG
AGCAGAAACAACCAGCTGGTGAGTAGTCTTCTCTTCATGAGTATATATAA
TAAAATCCCCCTTGATACAAATATCTCGAAAGATTAGAATAGATTGTGTA
AATACTTTATCCAGGAAATAATAATTTGTATACATGCTGGCAGCCTGACA
AGGAATAA

Sequence Length:

6208

Sequence Checksum:

cf7eee065c5cc927523689d7f83c7956

View location in JBrowse:

DCARv2_Chr8:25306140..25312347+

Cds:

>DCAR_027192cds ATGGATAGGATTCGAGATGGTAGACGAGCTGCTGCTTCCAATATTCCGAA CGGATTATCGCGACGGCGTCATCGAACTAGCTCTTTCAGAGATTCACCTG AGGACGAAGCGGAGATGCATGAACCGGCGAGATTGCGAGAGAGAGGAGTG AAGAAAGATCGAGAGAGAGATCGAGATCGAGAGAGGGAGCGGTCGAGGAG TAGTAAAAGGAGAAGAGCTGATAGATTGATGAACGCCGCCGATGAGAGCT CTGAGGAAGACGAGAGTGTGAATGATGAAGAGGATGAAGATGATGACGTC TCCGCTAATTTCTCCAGGATGTTGCCGCCTCTGCCTACTCCGATCTTATC GCAGCCGTCGATTTCGAGTAATTATAATAATCATAACAATTCGCATAGTT ATAGTCATAGTCATCATCAGAATCTGAACCGGAAGAGTTTGTTATCGGAC GGTGGTAAGATGTATAAAGCGGCTGTTCCGGCGTGGAAAGCTGCCGCTGA TGAAATGATTGGTGTCTCTGTTCCTAGGAAGGCCAGAACTGCATCAACGA AGAGGTCGCATGATTGGGTTTCTAGTGGTGGTGGAGGAGGAGAGCAGATG AATCACCGGCAAGCTTCAAGTTCGCCGGTTAGAGGAGGAATTGCTATGTC AACGCAGTCTGGGGCGGTTGTGAGGGAGGCTGTTCCTTTGTCGCCTCCTT CGTCTTCAAATGTTTCGATTAAGAAGAAAATTAAATCTAGTGGAGGAATG AAGCCTAGACCACAACCAAGGTCTACGACAACTTCAAAGTCTTCGTCTTC CAATAATAATCCGGAGGAGCTGGAAATTGAGATTGCTGAGGTTTTGTATG GACTCATGACTCAATCTCAAGCTCCTCCAAAAAATGATTTATTGTCGAAG AATGAATTTAATAACAAATCTAGTAGTGAAGCTAAATCTCGAGCTTCTTC CCCAGTATCTAATTCTTCTTCAGCGGCTCCAATAACTGCTGTTGCTCCGA AGAGGAAGAAGCCGCGACAATTGTTAGATAATAATTTTGTGGGTAGTTCA AGTACGCGAAGCAGTCCATCAATGAAGTTAGAAATTGATCAGACGGCAAG GTCTGAACTAAGTCCCCCTAATCTGGAAAGGAATTTTGGATCTGCAGCTG AGAATGGCGAATCTGCAAATTCAGGTAAATCTGGTGCGGAAAATAACCAA CATCTATCAAAGTCTATGAAGCTGGAAGCGGGCACGTTGTGTGAATCGGC TTTAATGGAAGAAGCTGGGGAAAGCCGAGATGTGGTGTCAACAACCAAGG AAGAGGTTAATTCTATCAAGAAGGATGTACCTGTGGTTAAATTAAAAGAT GATCCCAAGGAGATGATAGTGACATCGATGGCAACATCATCTAATGTGAA AACAGCAGCTCCAGCAATTGAGAAGAATAGGGAGGAAAAATATCAGATAG ATCTGATGGAAAAGAAAAAAGAGATGAGCAATGCTAAAGAAACTGATAAA GTGGGAAGTAGCAAGGAAGATATAGTGATTCATTCTGCTGAGAAAGTTGC AAAGACGGTAATTGAAGAAGTTGAATTCCAGAAATCATTTGTTAGCAAGG AGCGGAACATTGATCTCCAGTTAGATTTGGAAAAAACGGGTATGGACACT GTTAGCAACCCTCAAAATGATCATGTTGTGAAATCACAAGTACAGTTCTC TAAAGCTGCATTCAAAGAAGAGCAGCAAAATACGGACAAAAGTGCTCAAT CCATCTCTTTGCCTTTGCCTATGTCTGTTGCTAGCTGGCCTGGCGGAATT CGTCCTCCAATTGGGTACATAGCACCACTACAAGGAGTTGTATCAGTTGA GGGGGGTACCATGCCTACAGCACCAGTTCAGCCTCTTTTCTCTCAACCAC GGCCTAAGAGGTGTGCCACACATTGTCATATTGCAAGAAATATTCACTAT TACCAGCAACTCATGAAGATGAATCCTTTCTGGCCAGCGCCTTCTGGCAC TACTGCTTCTATGTTTGGAGCCAAATCCTCCAATCTCAATGTTATCCCCC CTACAGAACTACACGGTAACAGTTCTGGAAGGAGTCTGAACTCCATGCAA GACAAGGGTCATAGTCTTGCTATCTTCCCAGGGAGTGCTGTAAAAGAAAA TTTTGCCCAACCTGCTAGCATTGCGGATGCTGGGCATGCGAAGCAACAAA TTTTGCTTCAGCAAGCTATGCCTCCAGTACCTCCCACTAATATGATGCAT GGCCCTGCTTTTATATTCCCCTTCAATCAGCAACAGGCGGCTGTTGTAGC TACTTCTGGAAGGCCTGCTTCGGTAAAATCACCAACCACCACAGGGGGTC TACCTTCTACTGGTGCGCCAAACTCAGCTACTGTGGCTGCCTCGGCACCG ACACCTGCAAGTGCACTAGGCTTTAACTACCCAAATATGGCTGCGAATGA AACCCAGTACTTGGTGTTACAGAACAGTCCATACCCATTCCCAATTCCAG CTGTTGGGGCACCACCAAATTTTAGAGGCCATGCTCAGCCAATGCCAATG TTCAATGGATCTTTTTATCCTTCTCAGATGATACATCCGTTGCAACTCCA GCAACAGCAAGTACCAACAACTCAGCAACAACAGCAAATCCAACAGACTC ATCAGAACACAGGTGGCGGCTCCATGTCTTCACAGAAGCATTTGCAGTCC CAACAGCACCGTCCGCAAGGCATTGCGATCAATGGTGGTGAAACTGGAAA TGGAGTCTTGCAGAACTTTGCTGCCCCTAAAAGTCGTTCCTCTCAGCAAT CACAGCAGCATCATAATCAGCATTTACCCCCTTCACAAGCAAGGCAGCAT GAAAGTGACGTAGGCGGTGAAGACAGCCCATCAACTGCTGATAGTCGAGG ATCTCGCGCACCAGTGAATGTGTACAATCAAAACTTTTCCATGCCCATTC ATCCCCAGAATTTTGCTTTGATGAACTCATCTGCTGCTTCAGCTGGTGCT ACGGTTGGCAGTGGTGGGAATCAAAGTGAGAAGAAGCAAACACAACATCT TCAGGGTTTCAAATCAGGTGTTGAATCCCTTTCATCTCAAGCATATGCTA TGTCATTTGGTCCCATGATTGGTTCCACTTCGGCTTCTGGAATTGACTTG TCTTCCATGTCACAAAATCATGCCATCCTTCAGAGCTTACCAGAGGCTAC TACAAGGCACAGCTATCATCAGATTATGCAGGCAGCAGCAACTGCCCAAG CTGTTCAGCAAAAGAAGAATACTAGATTGTCAGAAGATGGTAAAATTGGC GGTGCTGTTGCATCCAGTGCAGATGAAGAGAGGAAGGTGCTAACGGGCAA GGGTCCAGCTTCTAGTGGAGTACAGTCCATTAGTTTCTCTAGACCAGACT TTGTTGATGCATCTGAATCTGCAACCCCTAAAGATAGTGCTTCCAACAGC ATGGCTCGAATGCTGAACCTTGCACCTGGTGCTGCTCGAATGCCTAATGT TATGAATTTGGTTGGCCCTTCCAATTCTCAGTTGCATGCTCAGTTGCAAC ACCAACAACACCAACAGTTGATTCAGATGCACAACCAGCAGCAACATCAA CAGCAGCAACAACTAGCAGCTAACATGACAGCTCGTAGCAAGACACCATC AAGTAATGGAATTGCGTCGTCGGAGCACTTAACTTCATCATCAGTAGCTT CCAAGTTTCCAAATTCAATATCCGGCTTTCCACCAAATTTTGTTCAAAGC AGCAATAACAGTAGTCCGACCCAATCTTCGCAATGGAAAAATTCTAACAG AACTCCCACCTCCCAAGTTCAATCATCACTGGTCTCATCAACGTCATCCC CCAAAAATCATCAACAGCAGCAGACAAGAACCCTTCAAAACCACACTCAA ATATCCTTTGGGACAAATCAGAAACCATCAGCATCTCCAGGGCAACAGCA TCCTAATAGCAGCCAGTCCCCATCCCCACCAGTCGTAGTCGGATCTCCTA CCCATTCTTCCCTTTCTAAAGGTGCTAACTCTAGCCCAAGAATAAATACT GCTTCGGCAAACAAGACTGGTCAAGCATCTACATTGTCTTCTCAGCAGAC AAAGAATTCGACATCTGTTCCGAGCCAAAAGGCCTCTCCGGCGGGTGGGA GAAATGTTCCATCAGTTCTTGGGAACCCTCACAGTGCTTCTCTGAGTGCT ACAACTAAAACACAAATTCAGATGCAGCAGCTGCAACAACAACAGCGACA GCAACAACAGTTTCAGCAGCAGTTATCAAAGCAAACACTGCAGCAGGCAA TGTTTTTTTCAAATCCTTATTTTCAAGGCCAACCACCGAATTCTGCTAGT TCTAATACTTCAGCTGCCAGTGGTTATAATCTTCAAAGGAGGCAGCCTGA GCAACCACAGCACTCTCAGCAATCTCAAGGATCCTCTCCAAGTTCTTCCG GGATGTTGTCTATGGGTCCTCCACCAACACAATCTAGTACCAGCACAACT GATCCTGCAAAAGCCGCTGCTGCGGCTGCGGCCGTGGCAGCAGCCACGGC AGCTGCTAGCAGTATGAAAGGAGGTGGTTTTTCCTCGCAGGGTATTCTCC ATTCTCCCCAGTTTGGGGTACAGTCATCAGGAAATTCTCATCAGTCACTG CCGGTTGGATTCTCCTATGGTCACAACGTACCAGCTGCGGTCCAAGTGAA GCCAGCAGAGCCAAAACAGCCAACTGAGCAGAAACAACCAGCTGGAAATA ATAATTTGTATACATGCTGGCAGCCTGACAAGGAATAA

Pep:

>DCAR_027192pep MDRIRDGRRAAASNIPNGLSRRRHRTSSFRDSPEDEAEMHEPARLRERGV KKDRERDRDRERERSRSSKRRRADRLMNAADESSEEDESVNDEEDEDDDV SANFSRMLPPLPTPILSQPSISSNYNNHNNSHSYSHSHHQNLNRKSLLSD GGKMYKAAVPAWKAAADEMIGVSVPRKARTASTKRSHDWVSSGGGGGEQM NHRQASSSPVRGGIAMSTQSGAVVREAVPLSPPSSSNVSIKKKIKSSGGM KPRPQPRSTTTSKSSSSNNNPEELEIEIAEVLYGLMTQSQAPPKNDLLSK NEFNNKSSSEAKSRASSPVSNSSSAAPITAVAPKRKKPRQLLDNNFVGSS STRSSPSMKLEIDQTARSELSPPNLERNFGSAAENGESANSGKSGAENNQ HLSKSMKLEAGTLCESALMEEAGESRDVVSTTKEEVNSIKKDVPVVKLKD DPKEMIVTSMATSSNVKTAAPAIEKNREEKYQIDLMEKKKEMSNAKETDK VGSSKEDIVIHSAEKVAKTVIEEVEFQKSFVSKERNIDLQLDLEKTGMDT VSNPQNDHVVKSQVQFSKAAFKEEQQNTDKSAQSISLPLPMSVASWPGGI RPPIGYIAPLQGVVSVEGGTMPTAPVQPLFSQPRPKRCATHCHIARNIHY YQQLMKMNPFWPAPSGTTASMFGAKSSNLNVIPPTELHGNSSGRSLNSMQ DKGHSLAIFPGSAVKENFAQPASIADAGHAKQQILLQQAMPPVPPTNMMH GPAFIFPFNQQQAAVVATSGRPASVKSPTTTGGLPSTGAPNSATVAASAP TPASALGFNYPNMAANETQYLVLQNSPYPFPIPAVGAPPNFRGHAQPMPM FNGSFYPSQMIHPLQLQQQQVPTTQQQQQIQQTHQNTGGGSMSSQKHLQS QQHRPQGIAINGGETGNGVLQNFAAPKSRSSQQSQQHHNQHLPPSQARQH ESDVGGEDSPSTADSRGSRAPVNVYNQNFSMPIHPQNFALMNSSAASAGA TVGSGGNQSEKKQTQHLQGFKSGVESLSSQAYAMSFGPMIGSTSASGIDL SSMSQNHAILQSLPEATTRHSYHQIMQAAATAQAVQQKKNTRLSEDGKIG GAVASSADEERKVLTGKGPASSGVQSISFSRPDFVDASESATPKDSASNS MARMLNLAPGAARMPNVMNLVGPSNSQLHAQLQHQQHQQLIQMHNQQQHQ QQQQLAANMTARSKTPSSNGIASSEHLTSSSVASKFPNSISGFPPNFVQS SNNSSPTQSSQWKNSNRTPTSQVQSSLVSSTSSPKNHQQQQTRTLQNHTQ ISFGTNQKPSASPGQQHPNSSQSPSPPVVVGSPTHSSLSKGANSSPRINT ASANKTGQASTLSSQQTKNSTSVPSQKASPAGGRNVPSVLGNPHSASLSA TTKTQIQMQQLQQQQRQQQQFQQQLSKQTLQQAMFFSNPYFQGQPPNSAS SNTSAASGYNLQRRQPEQPQHSQQSQGSSPSSSGMLSMGPPPTQSSTSTT DPAKAAAAAAAVAAATAAASSMKGGGFSSQGILHSPQFGVQSSGNSHQSL PVGFSYGHNVPAAVQVKPAEPKQPTEQKQPAGNNNLYTCWQPDKE*