DCAR_027073 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_027073

Identifier:

DCAR_027073.gene

Locus Tag:

DCAR_027073

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 3 relationships.
Relationships
The mRNA, DCAR_027073, is a part of gene, DCAR_027073.
The genetic_marker, MK018944 8_26361762, is located in gene, DCAR_027073.
The genetic_marker, MK006154 K3598, is located in gene, DCAR_027073.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_027073	DCAR_027073.mRNA	mRNA	DCARv2_Chr8:26361648..26370058

Sequence:

ATGATTGCACGGCAACAACACTCCGACAATGACCGCAGCAACGATTGCAA
TCTGACGTCACTCTGCGATCATGTCCAGTTAGAAGGTTTCAATAATGGCA
CGTTCTCCGATGTTGTTGTTCATGCTATGGGCTCCACTTATCATCTCCAC
CGCCTCATTCTCTCTCGCAGCTCCTACTTCAGGTCAATTTTAGCTCCAAT
TAGATTTTTCGGGTTCGATAAAGTGTTGCAACTCGTTATCCTAATTGTAA
ATTTTATAATTGTGAGAGTGTTTGTTTAAATTGTGATTCTCAATTATTGT
CTCTGATAACTCCAACTTTATGCTACATTGATTTTTTTATTTACAGATAT
ATGTTTTTTTTTGGTTTTATCGGATAAGTAGAAGTTAGGTTATTGTTTGA
TCTAAGTAGAAATGCACTGAATTTGTGTGATGCAAAGTACCTGTTATTTA
TAATGATGATGTGGAATTGTTTAGGTTTTGGAATTGATAAACATTTTTGC
GTGTATAATATGTACATATTTTGTTGGAAATCAACATTTTTGGCTTCGTG
CAGAATGTGAGTTTGGCAAGTATAGGAAGTTGTTAGGAATTATGGTAATT
TGAGTTAGCACTTATCTGGACAAAAGTAATGCTACGTACCCCAAATTTTG
TTCCCAAGCAGAAGATGGCTGATTTTAATTGGATGGGTTATGTGCTTATA
GGGGTCCCAATATTATTAGTGTTTGGAACTTGTGATACATTGCCAACTAG
ATTTTGGAACAATTTTTGGGGTACCTAGCATTTTCGTTTAGACAATAGGG
TGGTCAGGCACACACCTAGGCGTCTATTTAATTTTCCCTATTTTTTTGAC
TGATCTGGTATGGTAAGGTTCAGCTTGTTATCCTTCAAATACTGGGTCTT
TTCCTTTAGTATTAGTTTTATGTTTATTTAAACAAAGATTCGTGCCTGCT
GTTTTGTACAGTTTGTCTTCGATAGGGTGACAGATATATGTTTTATTGGA
GCAAGTCCTCCAATATTCGAATTATTATTGGAGGGAAATTATTAAGAGAG
AGGAGAGAGATGTGTTGAAATGGAAGAAAGCTAATTTTTTATTGATAGAA
AAGGTTTAGGGCATGCATAGTGGTGCCTCAAAAATAAGGCACTTGTTAGA
TGTCCTAGTGTTTTAAGGCACCACTAGGACATTGTTGGAGCACGCATTTG
CTTCAAATGCCATAAATTTTGATTCAGGACATCAATTTGCACTGTTTCAC
TGGCTCTTATATTTGTAAGTCACTGTTTGCTGCAATATTTTATCGATAAT
GGCATACATTGTTACTGCAGAAACATGCTTCATGGACCTTGGAGAGAAGC
CAATGCTCCAGTTTTGTCTTTGCATGTGGATGATAACAATGTTAATGGGG
AGGCAATTGCTACAGCTCTGGCATATCTTTATGGACATCACCCTAAGCTT
AATGATGATAATGCATTTCGTGTTCTGGCAGCAGCATCATTTCTTGACCT
TCAGGTATCCCAAGGTTTTAGGGTGTAACAGGTGTTTATTCTTTGATAGA
GGTGATTTCAGTGTTAATAAGTTGCGCTAATTGACCACTCACAAGTGATT
GCACCTAAATTGACTAATAGGCTTGAAGAGGTTCTAAATTCATATTGAGT
GAGGGCTATATTTTCAGTGGCTTTGATATATACTTTTAATTTTATGTTCG
CAACTTATGGTTTTAATTTTTAAGGTTTGTCATTCTGCAAGTATAGTTTA
TAAATCATGTGTGAGATGTGCCTTGCCATCCTGCTAACGAATTTTTTTCC
TCTGAATTAAATAGTTAGAAAAGGTTGGAACTTGATATATAAGATTTACC
AGATAAGTTCCATCAGTGAGACTCACGTGTAGTATCCCTGCATATAAAGT
TGTACATTGGAGATTAATTTGTAAAATGTGGAGTTTATATTTAAATATCC
AAAAACTTTACAGCATTTAGATACCTGAAAATTATTTTAGAATCAAATGT
AACCCTGCGCTTCATATTTTGAGTTGCTGTCTTTATAGAAATCTCTATGA
AGTATCATGTTTGACTATCACTGTATCACACAAACGTTTTTTGCTAAATA
ACCATCACATAATGTTACTTCACCTTTGTTGTGCAAGTAATCTTGAATAA
TTTCACTTTCAGGATTTATGTGCAATCTGCACTGACTTCATCATATCTGA
ACTATGGACTTCAAATTTCTTAGCATATCAGGTTAGTAATGGCAGCTACG
TCTCATATAGTCTTCTAGGCACATCTATTGACCATATTCATCATTGACCT
AGGTGTTCGCAGAGAGCCAAGATTATGGTATACACGGAGAACGTGTTAGG
AGTGCTTGTTGGGGATACCTTTGTCAGAGTGGCGCCTTGGAGTTAAGAGA
GGTATGCGATGGATAATGATCATATTCATGTTAAGAATTTAGAAATGTTC
TTTTTTTTTCGTAAATATTATAATATAATGTCAAATATATACTGAGCTAG
GAAGACCCTGCACTTCTACTATAATTAAAGTTGGTCAAGCATTTGATCGA
TTACTTTGTAGATCTTGTCCAGCTTCAAAAGCAGATACTCTAGTTTCTGA
AATCCAGTTGGCAGTTCTTTTTGTTTGGTAAAGGTCAATTGTCCAAAATG
AAATACTCATGTACACATTCCTCTGTTAATGATTGAACCTTGTTAGGAAT
CTTGTATCCAACAAACCCTTAACTTATTATTAAGAGAGGGTGACTTCTAG
GCAAAGCCTTGCAGATTTTCTATCAAGTTCTGTTAAGATAATTACTGGCA
AATTATCATAAAATAGAATTTCAATTAATTAATATTTTTATATGATAGAC
ACAAAAAAGAAGAGATACTCCTTAAGATTATCGCTGGCAGATTTTTTTCC
AAAAAATAGAATAGTTACTTGATCTATGATGGCATGTGACAAAAAAAGAA
TAGATACTACGTAAATGCTTTAATAGATGGACATTTAATTTTCGAAAGCG
CCCTGTGTGGAGATAGTAGATGACATGGACAGACTGGGTCAGTGGCTGCA
ATAGGTCCTTCATTTTAAGGAATAAAATTCCTGGTAATATAGGGAATCCG
ATTTTAGGTTATTGAACATCCCATGATGTTAAGTACCTAATGCAACTATC
ATCTATAATCCAAGATAGATACCAGTTCGGAAGTTAATTGAACATGAGAG
AAATAAGACAATATAGGTAGATTTAGGTTATCAACCATGAAGGAATCGGA
ATAGTTTTCATGGTGTAATATCGTATGATAGGGCCACTATCATTTTTGGT
TCTTTGGAATGATTTGAGCCACCAACAGGGTGATGCAGTTATAATAAAGT
GGTCGCTTTTTGGTCGCATTACCTAGCTTAGAGGATAAGTGAGGCGATTG
ATTAATTATTTTTTTTGTAAAGAGAAAATTAAAAAAGGAATCTAAATAAG
TTGTATTTTGGACTCATGTAACATATTAGTCAAACTTTGACCCATAATTT
CAAATCTTATACTCAATCTTTACCATTACTTATTTCTTAGCAGTTATCCT
GGGAAATTGATAAAAATATTAAAAGGTAAAAAACACTACGATCTATATAT
GAGGATAAAGAGGAGCATGAGTTTGAGGAGGCAAATCAGGATAATAACAT
CAAAGGAGATTATAATGTCGACTTTGAAGAGGATGCTGTAAATGAATGAT
GATAAATATATTTAAATGTTTACTACTTCTGTTTAGTGATTAAACTCTTA
AGAGTATCAAGAAGCTTTTGAAATATGAAGCTTACCCTTTTATGTGTGTA
CTTATTTGAATGTTAATTGACTTGAGCACTGTTTAACGAGTTATGACTTT
ATTACTTGTAATCTCATTAACTTATAAATCATACCTCTATATGTTGGTAA
TCAGCTAATGTTCATCTTTATTTTTATGTTGGATTCAGTAATTATTACTA
TAATATAGCTGTCATATTAATGTTAATTTTACTAAAAATATATATATTTT
GGGGCGTCAAACACACATCTTTAATGAAGCGACCATTTCACCGCTAGCCA
CGTGATCAATTAATAGATACCCCTTGTCACCTCGTCTCACTTTTCGTGTT
TAATAACATTGCATAATCTTTCCATCCTTCCATTAAACAGGTGCTTCCGA
AGCTTTCCTCTCAGACCTTGCATGCATTGCTGACTTCAGATGAATTATGG
GTGCCCAGTGAAGAAAAACGGTGAGGGGCATTTCAATTGTCAATATTCTG
ATTTTATACTTACAAGTTCGATATCTGTAAAGGTGTTACAATATTGAATA
ACTCTTGTTTTATTATTAATTGTTTTAACAAAAAAGGTTTGAACTGGCGT
TATACACTCTCGTCGCCAAAGGTGCACCTTGCAAGGCAGAACATGGAGAG
GAAGGAAGTGCCAATCCTGATATAGTACCACATACTAGTTTTGAATATCA
AAAGTCAAAAGGAAAAGAGGTGGTAAGTGACAGCTCTAGTATTATATTAG
AATCGGACATGGGCAGACTAAGAGTCAAAGATCAACTTGAAGGTGAAAGT
ACTCCTGGTAACGATTTGGTTGAGCTTGCAAAAGGTGTAATTCATTCCTG
CAGAGAGCAACTTGAGCCCAGCAAGCAGCTGCAACAAGCATCTGCATGCA
CTCAGTCAACTTTGGAGCCAAGATCTCAATGTAACAATGAACGGACTTCA
TCAAAAAATTCCTGTTCATATACTGCTGAAATGAGATCCAACTGTTCATA
TCTTGAAGTCCCAACCAGTGCCAGAGCTAACTTACTTTGTAATGATGGTG
TTGCCATGGAAGGACCATCTGAAGAAGGTTCATGCTACCAATCGAACAAT
AATAATTGGCTTACAGGGGAACAAAGGCCGTGCAATGCTATGAACTCTTC
CTGCGACGGAATCATGTCCAGTGAATGGGGAAGATGCAGCATGCCTCCTC
TATCATGGGGAGGTAGAATTGTGGGTCGCAGAGATTTAAAAACTTGTGTT
AAAGGAATATGTGGGTTGAGTGGAGAAGATTATGATGCATTTGTCAATAT
ATTCGAAGGAGGCTCTCTTTTGTATTCCAACATGACATTTGAGGCACTCT
TAAATGTTAGAAAGCAGCTTGAAGAATTGGGGTTTCCAGGCAAAGCTGTG
AATGATAGTCTCTGGCTGCAGGTTTGATTGATATTTGTTTTCACATGAAT
CTCATATGCGAGTTTCACATGAATTTCATATACGAGGCATTAGTTGATAA
AGTTCCGATTCTAAAGAAAATTGCGATATATATATATGAGAATAGTTGTA
GATTATTTATTTAGGAACTAAAGGCTGGGCACTTAGATAAATAAAATCCA
TCAAAATGACTAGAGTTATTCTCCTGTTATCATGAACTTATATTTAAAGT
TCTAGAGTGGTCTTGTCTTTTTGTTGTGCATTGGCTGTGTTTATCTTGAA
GCTATCTGATTAATACCTTTTATGATTATATCACTTCAAATTTATATGTT
TCAAAAAACATTCTGATATTTATTATGTTTCAAAAAAACAATCTGATTAA
CAATTCTATTTTTATTTTTTTCTGAAAATTATTGATAAAAATATGTATTT
TTAAAATTAATTTTGCATTTATATACTCTTTCAGAATAGATCGGCATTTC
TAGTGGTTTATGTCCTATGCTCTTTGGTTATCAGTTCATTTGCTTTTACG
TGATAAGTCACAACTTCATCTGTTAACTTTTTTTGTATTGATCAGCCAAA
TATATGTGATACTGTTTTTGAATAATGTCTGAAGCTTCAAATTCTTGTCA
CAATGGAAAATATAACATTGCGGCAATTTTTTTTCTTAATCCAGTTCTCC
AATCTAAGTTTAATCTTGTGTTCTTACTGTGGGTTTTCGTGTTGCTCTGT
GGGTTTTTCTAGATGCTCCTGAGTCAGCGGGTGCTGGAGATTGGTGCTGA
CACTTGCAAAAATTGCTGCCTTGTCAGCATGGTGTGTGCATGTAGGCAGC
CATATGGGTATTCACGCGGCATTCCTTCCTCAGGTTATTACATACAAGAG
CATGACCAGCATATATCACCAAGCAATATAGGAAATCTGTATGTCACTGA
TTCTGCTCAAGGTGAAGGCAGTGGGCTATTTCGGCCTGTACGGGTGCATG
TAAATAGAGGAGGGCCTAATGATGGGTTAGCTGGTATTGGACGTGGAACT
ACGTTTGTTCCAGCAGCTGCCTGGCCACCTACACGCTTTGTATTTTCTCG
AGTTCCTTTTGGTGCGGGTAACCGTAACTGCCAGCAGACTCTTGGTAATG
ATGATTCAGATAATAGAGCTGATCACAATGCAGATGGGGTTGGGGATGGG
TTGACAGCTTTAGTTGGGCTTAGCCAAGGAGTGAGCAGCATGTCCAGTGT
TCATGGGGAGCAAACAGAGAGGGGCTATGAGACAGATTTGCAAGGGGGAC
TAATAGGTCATTCAGTTTCTGCTTCTACAACTCCAGGGATTTCTGTGCAG
ATGTTGGATTCGCCAGAGCAGGCCATTGGAGTTGAGTGGGAGAATGCGAA
TAGCTCGATATCATTGGATATGAAAACACCTTTAAGCCACTTTCCTCCCT
TTCGCTTCTCGTAAGTTATTTCTTTTGTCTGGTTTACTTGCTGATGTATG
ATTTGTCATTTCCTTTTAAATTAGTATTTCGGCTTATGATCCATAAATGA
TAAAGCAATGTCTATGGTGGATATGATGTTGGAAAATATGGTACAGAAAA
AAGATAAAATACACACACACACACACACACACACACACACACACATATAT
TATTTTCCCTCTATATTTATAAAAGATAGTTGTTGCATTGTGTTTCAACG
AGAAATTAGACCACAAATTCACTTTTCAAGTGCTGGATTTTGGGTGATTT
TTTCCAATTGCCTCTATCATTATTTCTGTAGGCCTGATTTGAAAATCACT
GTATTTAACAACAGAAATCAGAAAAATTTATTCTATTTTGAAAAATTATG
TACATGTGCTTAAGATATGGACTTGTTCCATGGACAATAACATTGGGACT
AAATCTACTTCTTCTTGAACTTCGGCAGCATATCATAATCTTGTATGAGT
TCTGGCAGACAATTATAACTAATGTGCTAGAAAGAAGCTACTAAAAGGTC
TTAAGTTATTTGGTGGTTCTACAGGGTCGAATTTGATGATGTACACAGGC
TTAGTGACGGCCAAGTGAAACACTCCCCGGAAGTTTTTTATGCTGGTTCC
TTATGGAAGGTATGTAAAGAAGAGGTGGTTAAGTTGCATATCTTGTTTTC
GAAGTAGTATTCCTGTTTCTAAAGCTTTACTTACCTTGTTGATTAATATT
ATGTGTTGAATCACGTAGGTTAGTGTTCAGGCTTTTAATGATGAAGACCC
CCAAGGAAGACGAACTCTTGGTAATTTTATTTGTAGAATTAGCCTTTACA
TAAACTGTAAATATTGTTTGGTTTGGTAAAAAATTTGTGTGACCTATATG
TTTGTTGTTTCAGGATTGTTTCTTCATCGGAGGAAGGCAGAGATAAATGA
TCCTCTTAAAAAGGTTAGAGCACGTCAATGACTCAGCAGAGACATCGGAT
AAAACTGATTTATAAGATCTTTGTTAACACAAGAATATTGATGAAGTTTC
TTAACAATAGTGCAAGTATCTTTGTTGACACAAGAATATTGATGGAATTT
TTAACAGTAGTGCAATTATAATATAGAAGTTCATTTTTAATTAATATTAA
TTGCGGATGAGATTGCCAATTCAATTTTGTTAGAGTACAATTATGTGTGA
CCTGTTAGCAACTATCAATGCCATAAATTTACATCTTAGAGATTTAGAAT
TTAGATGTACACTATATTTTTTATTTTTCTAGGCATATATTGTTCTAGCA
GTATAATTTGCTTGGTATTCGTGATGTTGATTAGTGGGGTGATTACTAGA
TAAAGCTTACAATAGCCGCAAACTTAATATAATATAAAACAGTGCAAGTG
TTCGGAGAATTTTGAATTCAGGCAGCCTTCTGGCATCCTTTAATCTGTCG
TTTGTTGCCATGTGTTTTACAGGTTCATATGTATGTGGATACTCGTGAAA
AGGTTACAGCTCGTTATCAGGTAATGTGGTTATTATTTAGGAATTGCTCG
AATATTCTTCTTTTGCTAATAATTAACCTGTCAGAAGAGAGAAAGTCTTT
CTGGCTCTTATACATGCTCCCTTTTATATCCAGCTTATTTGTCCATCCAA
AAGAGAAGTGATGGTTTTTGGAAGCTTAAAACAGAGGGGAACACTTCTAC
CAAAAGCTCCAAAAGGATGGGGCTGGCGCACTGCTTTGTTATTCGATGAG
CTAAGTGATCTTCTGCAAAATGGGGCTTTGCGGATAGCTGCTATCGTGCA
GCTCATTTGA

Sequence Length:

8410

Sequence Checksum:

a16beed6ad6c0c7c473b9ac123c6e73c

View location in JBrowse:

DCARv2_Chr8:26361649..26370058+

Cds:

>DCAR_027073cds ATGATTGCACGGCAACAACACTCCGACAATGACCGCAGCAACGATTGCAA TCTGACGTCACTCTGCGATCATGTCCAGTTAGAAGGTTTCAATAATGGCA CGTTCTCCGATGTTGTTGTTCATGCTATGGGCTCCACTTATCATCTCCAC CGCCTCATTCTCTCTCGCAGCTCCTACTTCAGAAACATGCTTCATGGACC TTGGAGAGAAGCCAATGCTCCAGTTTTGTCTTTGCATGTGGATGATAACA ATGTTAATGGGGAGGCAATTGCTACAGCTCTGGCATATCTTTATGGACAT CACCCTAAGCTTAATGATGATAATGCATTTCGTGTTCTGGCAGCAGCATC ATTTCTTGACCTTCAGGATTTATGTGCAATCTGCACTGACTTCATCATAT CTGAACTATGGACTTCAAATTTCTTAGCATATCAGGTGTTCGCAGAGAGC CAAGATTATGGTATACACGGAGAACGTGTTAGGAGTGCTTGTTGGGGATA CCTTTGTCAGAGTGGCGCCTTGGAGTTAAGAGAGGTGCTTCCGAAGCTTT CCTCTCAGACCTTGCATGCATTGCTGACTTCAGATGAATTATGGGTGCCC AGTGAAGAAAAACGGTTTGAACTGGCGTTATACACTCTCGTCGCCAAAGG TGCACCTTGCAAGGCAGAACATGGAGAGGAAGGAAGTGCCAATCCTGATA TAGTACCACATACTAGTTTTGAATATCAAAAGTCAAAAGGAAAAGAGGTG GTAAGTGACAGCTCTAGTATTATATTAGAATCGGACATGGGCAGACTAAG AGTCAAAGATCAACTTGAAGGTGAAAGTACTCCTGGTAACGATTTGGTTG AGCTTGCAAAAGGTGTAATTCATTCCTGCAGAGAGCAACTTGAGCCCAGC AAGCAGCTGCAACAAGCATCTGCATGCACTCAGTCAACTTTGGAGCCAAG ATCTCAATGTAACAATGAACGGACTTCATCAAAAAATTCCTGTTCATATA CTGCTGAAATGAGATCCAACTGTTCATATCTTGAAGTCCCAACCAGTGCC AGAGCTAACTTACTTTGTAATGATGGTGTTGCCATGGAAGGACCATCTGA AGAAGGTTCATGCTACCAATCGAACAATAATAATTGGCTTACAGGGGAAC AAAGGCCGTGCAATGCTATGAACTCTTCCTGCGACGGAATCATGTCCAGT GAATGGGGAAGATGCAGCATGCCTCCTCTATCATGGGGAGGTAGAATTGT GGGTCGCAGAGATTTAAAAACTTGTGTTAAAGGAATATGTGGGTTGAGTG GAGAAGATTATGATGCATTTGTCAATATATTCGAAGGAGGCTCTCTTTTG TATTCCAACATGACATTTGAGGCACTCTTAAATGTTAGAAAGCAGCTTGA AGAATTGGGGTTTCCAGGCAAAGCTGTGAATGATAGTCTCTGGCTGCAGA TGCTCCTGAGTCAGCGGGTGCTGGAGATTGGTGCTGACACTTGCAAAAAT TGCTGCCTTGTCAGCATGGTGTGTGCATGTAGGCAGCCATATGGGTATTC ACGCGGCATTCCTTCCTCAGGTTATTACATACAAGAGCATGACCAGCATA TATCACCAAGCAATATAGGAAATCTGTATGTCACTGATTCTGCTCAAGGT GAAGGCAGTGGGCTATTTCGGCCTGTACGGGTGCATGTAAATAGAGGAGG GCCTAATGATGGGTTAGCTGGTATTGGACGTGGAACTACGTTTGTTCCAG CAGCTGCCTGGCCACCTACACGCTTTGTATTTTCTCGAGTTCCTTTTGGT GCGGGTAACCGTAACTGCCAGCAGACTCTTGGTAATGATGATTCAGATAA TAGAGCTGATCACAATGCAGATGGGGTTGGGGATGGGTTGACAGCTTTAG TTGGGCTTAGCCAAGGAGTGAGCAGCATGTCCAGTGTTCATGGGGAGCAA ACAGAGAGGGGCTATGAGACAGATTTGCAAGGGGGACTAATAGGTCATTC AGTTTCTGCTTCTACAACTCCAGGGATTTCTGTGCAGATGTTGGATTCGC CAGAGCAGGCCATTGGAGTTGAGTGGGAGAATGCGAATAGCTCGATATCA TTGGATATGAAAACACCTTTAAGCCACTTTCCTCCCTTTCGCTTCTCGGT CGAATTTGATGATGTACACAGGCTTAGTGACGGCCAAGTGAAACACTCCC CGGAAGTTTTTTATGCTGGTTCCTTATGGAAGGTTAGTGTTCAGGCTTTT AATGATGAAGACCCCCAAGGAAGACGAACTCTTGGATTGTTTCTTCATCG GAGGAAGGCAGAGATAAATGATCCTCTTAAAAAGGTTCATATGTATGTGG ATACTCGTGAAAAGGTTACAGCTCGTTATCAGCTTATTTGTCCATCCAAA AGAGAAGTGATGGTTTTTGGAAGCTTAAAACAGAGGGGAACACTTCTACC AAAAGCTCCAAAAGGATGGGGCTGGCGCACTGCTTTGTTATTCGATGAGC TAAGTGATCTTCTGCAAAATGGGGCTTTGCGGATAGCTGCTATCGTGCAG CTCATTTGA

Pep:

>DCAR_027073pep MIARQQHSDNDRSNDCNLTSLCDHVQLEGFNNGTFSDVVVHAMGSTYHLH RLILSRSSYFRNMLHGPWREANAPVLSLHVDDNNVNGEAIATALAYLYGH HPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAES QDYGIHGERVRSACWGYLCQSGALELREVLPKLSSQTLHALLTSDELWVP SEEKRFELALYTLVAKGAPCKAEHGEEGSANPDIVPHTSFEYQKSKGKEV VSDSSSIILESDMGRLRVKDQLEGESTPGNDLVELAKGVIHSCREQLEPS KQLQQASACTQSTLEPRSQCNNERTSSKNSCSYTAEMRSNCSYLEVPTSA RANLLCNDGVAMEGPSEEGSCYQSNNNNWLTGEQRPCNAMNSSCDGIMSS EWGRCSMPPLSWGGRIVGRRDLKTCVKGICGLSGEDYDAFVNIFEGGSLL YSNMTFEALLNVRKQLEELGFPGKAVNDSLWLQMLLSQRVLEIGADTCKN CCLVSMVCACRQPYGYSRGIPSSGYYIQEHDQHISPSNIGNLYVTDSAQG EGSGLFRPVRVHVNRGGPNDGLAGIGRGTTFVPAAAWPPTRFVFSRVPFG AGNRNCQQTLGNDDSDNRADHNADGVGDGLTALVGLSQGVSSMSSVHGEQ TERGYETDLQGGLIGHSVSASTTPGISVQMLDSPEQAIGVEWENANSSIS LDMKTPLSHFPPFRFSVEFDDVHRLSDGQVKHSPEVFYAGSLWKVSVQAF NDEDPQGRRTLGLFLHRRKAEINDPLKKVHMYVDTREKVTARYQLICPSK REVMVFGSLKQRGTLLPKAPKGWGWRTALLFDELSDLLQNGALRIAAIVQ LI*