DCAR_026815 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_026815

Identifier:

DCAR_026815.gene

Locus Tag:

DCAR_026815

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 6 relationships.
Relationships
The mRNA, DCAR_026815, is a part of gene, DCAR_026815.
The genetic_marker, MK007891 TP138846, is located in gene, DCAR_026815.
The genetic_marker, MK004973 K2417, is located in gene, DCAR_026815.
The genetic_marker, MK018971 8_28438914, is located in gene, DCAR_026815.
The genetic_marker, MK018972 8_28438984, is located in gene, DCAR_026815.
The genetic_marker, MK005237 K2681, is located in gene, DCAR_026815.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_026815	DCAR_026815.mRNA	mRNA	DCARv2_Chr8:28435394..28439586

Sequence:

CTCGAAGATAATAATTACAAGTTATAAAAAATCAATAATCAATCTGTCCA
AGTAACAGTAATTAACGAGAATAAAATCCAGGCATTGTCTCGCGGTCATT
ATCACAAATATACGTGATTGTGATGTATTATTAGCATTACTTTACTCTAT
AAAATGTAGTCCAAAACTCCAAATCACTAAATTAATGTAAGAACAAGCAA
AAATACAATTCAGCTTTCTTTTCTTTTTCATAAACAACTCAGTCTCTTCC
CTCTGCATCTCTCTATATTCTCACAAATGTGGTAGTTTTGGAGAGAGACA
GAAGCTTCTTTTTTGCAAATATAGACACAAAATACACACACCCATGTGTG
TAAATGATGGAAAGGACTGAACTTTACCATTTGCAGTGAACAAGAAGCTG
AAATGAACAAGACCCTTGTGAGAATACTCTGTGTTTGAGGTAAAAATTGC
ATTTTTATTTGTGAATGTTTGCTGGTTAATGTGTGTTTATGTGTTGATTT
TATATGTAGAGTTGTTTATGTTTGTTTAGAAGAGGGAACAGTAAACGTGC
TATTCTTTGTCTGGACTTGTGGTAACTTAAGTTCACGCTTGTGGAAAGTG
TACTTGATTAGAGATGTTTTTAATGATTTGTTAATTCCACTAAGATTTTA
TAATGTGAGACCTTGTTTCATGATAGAAGCAAAGAGTTCCTTTGGTATGT
GGGCTTTGTTCATCTTTTGAGAGCAGTGTCTAGCCATGCTTGTTCCCCAA
TAGAATTGTGGAATTTTTTGTTTTTAAGTTGTTTGCATTATTGTGGGGGT
GGGGGAGGGGGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGAGAGAGAGAG
AGAGTGAGTGAGGGAGGGAGGGAGGGAGGGAGACTTACATTCTACTTTAC
TTTTGACACTGCTTAATAAATTATTCTTTGATGGTTTAATAAATAATAGT
TTTGTGATGATAAATATTTTCACATAAAACAATGTTGCAATGATAACCAG
GTACCTTTTTCTTTGTAAAATATGATAATTGGTTGTAAAAAAAAATTACT
GTCATATGGAAGAAGTTATATGTATAACTAATTATTGGGTCTCCGTCTTT
TAGAAAGGGACGAAGAAGAAGAATAGAGTAGACAAAACACATTTTTGGTG
TGTCGATGGGCATGAAGATGCAAGGCCATCATATGGTGGCTGTGAGGTTG
AATGATCCATTTGGGACCAAAAGAAAGTACACATTTGTCAACAGAGTATG
GCTGCCCAAGATATTATTTCTCTGGATTATGATTATGGTTTTCGCTAGTA
GAGTAATATATGATAGGATGGATGCTGAAAACAAAGAAAGAAGGAAAGAA
GTTCTTGTGAGCATGTGTGATCAAAGGGCTAGAATGCTGCAAGATCAATT
CAATGTCAGTGTTAATCATGTTCATGCACTGGCAGTGTTGGTATCAACTT
TTCACTACTATAAATTTCCGTCCGCGATTGATCAGGTTTGTGTTTAATAT
CATCTTCTAAGGTTTTGATTTTTGTTGGCCATGTTTTCTCTTACTTTGTT
ACTTTATGTCGTAAAGGAAACTTTTGCCGAATACACGGCTAGGACAGCGT
TTGAAAGGCCATTGTTGAGTGGTGTTGCATATGCACAAAGGGTTGTGAAT
TCAGAACGGGAGGACTTTGAGAAGCAACATGGATGGACAATAAGGACAAT
GGAGAGAGAGCCTTCACCATATCGGGATGAGTATGCCCCTGTGATATTCT
CTCAAGAAACAGTCTCCTATATTGAATCACTTGATATGATGTCAGGAGAG
GTAGTTCACTAGATTGCTTAAATATCTGTTTTTTCAAGTTAAATTGTCAT
ATTATATGTTAACAAAGAACTTGCCGCAATTAGTTAATGTATAGGTGTTA
ATCTCAAGGTCTACCTGTTCTCTAATATACACAGGAGGACCGCGAAAACA
TATTGAGGGCTAGGTCTACTGGGAAAGCAGTTCTTACAAGTCCATTTCGG
TTGTTGGGTTCTCATCATCTTGGGGTTGTGTTAACCTTCCCTGTATACAA
ATTCAAGCTTGCTCCAAATCCTTCAGTGGAACAACGCATCGAAGCAACAG
CAGGGTATTTATTTTATTTGCTTTTACATACTTTACATCTAATATTTCTT
TCTGTCTACTGATATCGCAGACAGTATGAAGTTTATCGACTTCTGTTAAT
TTTCTCCATTCGTATAGGGTCCTGTAGATAGAAAAATAAATATTTGCTTC
TTATGTGAGCGGATTTCTGTGTGATAAGTTATATGGCTAATCGATTCTTA
TTCAAATAGATACCTTGGTGGAGCTTTTGATGTTGAGTCACTGGTTGAAA
ATTTACTAGGCCAACTTTCTGGGAATCAAGCAATTGTCGTTAATGTATAT
GACATTACTAATCCTTCTGACCCCCTTATTATGTATGGACGTGAACATCA
AGATTTTGACATTTCCCTTGAGCGTGTAAGCATGCTTGATTTTGGAGATC
CGTTCCGGAGACACCAAATGATATGCCGGTGAGCAGGTTTTACCGTTCCT
GTAATAGATCCCAAGTATTACATTAATAGTTTGATTTGATTTAAAAACGA
CGAAACTATATGTAAAAAGTTTTACCAATGAATTCTTTGTTTTGAGGGGT
CCTGAACAGATATCTTCAGAAGGCTCCAACAGCATGGACAGCAATCACTA
CTGCATCCCTAATCTTTGTAATTGGCTTACTTGTTGGCTATATGATATAT
GGTGCAGCGCTTCACATTGTGAAAGTTGAGGATGATTTTCACCAAATGCA
GAAACTAAAAGTGCGTGCAGAAGCCGCTGATGTTGCCAAATCCCAGGTTG
GACATTCCACCACTTATTTTTGTCAGTTCTGTAATATTAGGTTTATCGAA
CTAGACTTTCTGATGTAATATCCCATTGCCTTTATATGCCAGTTCCTAGC
TACTGTTTCACATGAAATCAGAACTCCAATGAATGGCATCCTTGGTATGT
CTGATATGATTTACTTTGTCAGTTAGCAGTAAATAAAACTTCAGAAGTTA
TATTACAGACTCCATTCATGTGATGGATACTATTGCAGGGATGCTTGCAT
TGCTCCTTGATACAGATTTGAGCTCAACACAAAGGGATTATGGTCAAACA
GCTCAGGCATGTGGGAAGGCACTGATAACTTTGATAAATGAAGTCCTTGA
CAGGGCAAAAATTGAAGCTGGAAAGTTAGAGCTGGAAGTAGTCCCATTTG
ACCTTCGATCCATACTAGATGATGTGCTCTCTTTATTCTCTGAAAAATCT
AGGCACAAAGGTGTTGAGGTAGGATCTATTTATCAGTGACAAATTTATTT
TCTCTCCAAGTTAATACAATGTTGGCCTGTATCTTTTACATTTTTTTTAT
TCATTTAAGATGCAAGTTCTAAGATTGTGCTTTTCTGCTTTCTCCTATCT
TAATTCTTTTCTGACTAATTCCTATTATATGGGTCTTAAATTAATGATGG
CCTGCCTTGCTGAAATGTGCTATATTATCTATATTGGGCAAGTGAAGCTA
GCTGTGTTTGTATCTGATAAAGTTCCCAAAGTAGTTGTGGGAGATCCAAG
AAGATTCCACCAGGTGATCACAAATCTTGTGGGAAATTCTATCAAGGTCA
GTTACGACCCTTGTTGATTTCGTGACCCTTGTAGTGTGAATAGCTTAAAG
TTTTCCCTCAAGTATTGCGTGCCTCTTAACATCACTGTTGTGCTTGCCGA
TGTTCATGTTTGGATATGTCTTGACTCTTAGTAAACTACTTTATGACAGT
TCACAGAAAAAGGACATATATTAGTCCAAGTTCACCTTGCTGACCATGCA
CAAGTTGTCTTGGGGGCAAGTTCTGACGCCACCTTCAATGGATGGTCCAA
AGGTGCAGCTTTATCAAGCGTTGGTAGCCAATTTAGAACTTTGAGTGGTC
ATGAAGCTGCTGATAATAAGAATAGTTGGGATACACTTCAAAAATTGACT
GCTGATGAATTTCTGTCTAATACTTCCAACAATGTCACTGGTCCTGACGA
ATCATTTCAAAATGTCACATTGATGGTATCTGTTGAGGATACAGGGATAG
GGATTCCGTTACGTGCACAAGAGAGGGTGTTCATGCCATTTATGCAGGCA
GACAGTTCAACTTCTCGAAATTATGGGGGAACTGGTATTGGATTGAGTAT
TAGCAAGTGCCTAGTTGAGTTGATGGGTGGTCAGATAAACTTTAATAGTA
GTCCACAAATTGGAAGTACATTTTCATTTACTGCCGTCTTTAAAAGGTGC
CACAAAATTGCAACTGGTGATTTAAAAAAGTCTCTGGCAGGTGATCTCTC
TGTGGCATTTGTAGGACTGAAAGCAATTTTAGTTGATGAGAGACCAATTA
GAGCTGCTATAACAAAATATCATTTAAAAAGGCTTGGTATTCTTGTGGAA
AGTGTCGATAACATCCGGTTAGCAGCTACAATATCTGGGAAAAATGTTTC
ACAACCAGACATGATTCTGGTTGAGAAGGATTCCTGGTTATCTACTGAAG
ATGGTGGGTCAAATCTACGATTATCAGAATGCAAGCAAGATGGACAGAAG
AACTTATCAAAGATGATCCTTCTTGCAACTAATATCACCAGCTCCGAGTC
TGACAAAGCAAAGGCAGCAGGTTTTGCAGATACTGTGATAATGAAGCCCT
TGAGGGCAAGCATGGTGGCAGCCTGTCTTCAGCAGGTGTTTGGAACAGGA
AAAAAACCACAATTGAAAGGAATGATTAATGGATCCATCCTTCGAAGTTT
GCTTTGCGGCAAGAAGATACTGGTAGTTGATGACAACAGGGTGAACCGCA
GGGTTGCTGCAGGTGCACTGAAGAAGTTTGGTGCTGATATCGAGTGTGCT
GAGAGTGGTAAAGATGCACTTGCATTGCTTCAGATTCCACACAGTTTTGA
TGCATGTTTCATGGACATTCAAATGCCTGAAATGGACGGGTTCGTTCCTA
ACTTTATATTTCCTTTCATTTTAAATTTCAAATAAAAAAGTTAACCTGTT
CAAGCTCAATATTTCCACATTCCTTTCATCTGCAGTTTTGAGGCAACACG
CCGTATAAGGATGTTGGAGAGCAAAGCAAATACGCAGATAAACAACGGTT
ATGTCATCAGTAAATCTGCACAAACTACCGAATGGCATTTACCCATTTTA
GCCATGACGGCTGATGTTTTCCATGCCACACATGAAGAATGCCTGAAATG
CGGAATGGATGGTTACGTTTCAAAACCATTTGAAGAAGAGAACATCTATC
AGGCTGTCGCTAAATTCTTCAAACCTAAACCAGTATCCAGTCCATAGCTG
AACAACTATCCATGTCTTTAAACAGAAGACTACCAGTAATTTTTGGAAAT
CATTTGCTGATGATCATATTCGCGCAGAGTGTCGAACTGCAGGCACAGCT
CTGGTATTTGATAATTAACCGCTTTAGTTTAACTTGATCAGCTTCTTGAG
TACATATAAACCCTTATTGTTATAACAGAATCCATTGGTCTTTACTTGTC
AATTGTATGTAATGATTACTGGATGAAGTTTGCTTTTGGGGGAACAGGGT
TTAAGATGGTACAGACAGTAAGCTGATATAATGTCCCTGCATGGTTTATC
CACATTGCTTTGTAAGAACATCTCGTGATAATTTAAGATTTATACCCTGT
GCCATTTTAATCGGATTTTTCTTCCGACCTAATAAAAAGTAATTTGGTTG
TTTGATATTATATAA

Sequence Length:

7315

Sequence Checksum:

6bb90c9dd316749ff93bc6bc328c8e1b

View location in JBrowse:

DCARv2_Chr8:28432690..28440004+

Cds:

>DCAR_026815cds ATGGGCATGAAGATGCAAGGCCATCATATGGTGGCTGTGAGGTTGAATGA TCCATTTGGGACCAAAAGAAAGTACACATTTGTCAACAGAGTATGGCTGC CCAAGATATTATTTCTCTGGATTATGATTATGGTTTTCGCTAGTAGAGTA ATATATGATAGGATGGATGCTGAAAACAAAGAAAGAAGGAAAGAAGTTCT TGTGAGCATGTGTGATCAAAGGGCTAGAATGCTGCAAGATCAATTCAATG TCAGTGTTAATCATGTTCATGCACTGGCAGTGTTGGTATCAACTTTTCAC TACTATAAATTTCCGTCCGCGATTGATCAGGAAACTTTTGCCGAATACAC GGCTAGGACAGCGTTTGAAAGGCCATTGTTGAGTGGTGTTGCATATGCAC AAAGGGTTGTGAATTCAGAACGGGAGGACTTTGAGAAGCAACATGGATGG ACAATAAGGACAATGGAGAGAGAGCCTTCACCATATCGGGATGAGTATGC CCCTGTGATATTCTCTCAAGAAACAGTCTCCTATATTGAATCACTTGATA TGATGTCAGGAGAGGAGGACCGCGAAAACATATTGAGGGCTAGGTCTACT GGGAAAGCAGTTCTTACAAGTCCATTTCGGTTGTTGGGTTCTCATCATCT TGGGGTTGTGTTAACCTTCCCTGTATACAAATTCAAGCTTGCTCCAAATC CTTCAGTGGAACAACGCATCGAAGCAACAGCAGGATACCTTGGTGGAGCT TTTGATGTTGAGTCACTGGTTGAAAATTTACTAGGCCAACTTTCTGGGAA TCAAGCAATTGTCGTTAATGTATATGACATTACTAATCCTTCTGACCCCC TTATTATGTATGGACGTGAACATCAAGATTTTGACATTTCCCTTGAGCGT GTAAGCATGCTTGATTTTGGAGATCCGTTCCGGAGACACCAAATGATATG CCGATATCTTCAGAAGGCTCCAACAGCATGGACAGCAATCACTACTGCAT CCCTAATCTTTGTAATTGGCTTACTTGTTGGCTATATGATATATGGTGCA GCGCTTCACATTGTGAAAGTTGAGGATGATTTTCACCAAATGCAGAAACT AAAAGTGCGTGCAGAAGCCGCTGATGTTGCCAAATCCCAGTTCCTAGCTA CTGTTTCACATGAAATCAGAACTCCAATGAATGGCATCCTTGGGATGCTT GCATTGCTCCTTGATACAGATTTGAGCTCAACACAAAGGGATTATGGTCA AACAGCTCAGGCATGTGGGAAGGCACTGATAACTTTGATAAATGAAGTCC TTGACAGGGCAAAAATTGAAGCTGGAAAGTTAGAGCTGGAAGTAGTCCCA TTTGACCTTCGATCCATACTAGATGATGTGCTCTCTTTATTCTCTGAAAA ATCTAGGCACAAAGGTGTTGAGCTAGCTGTGTTTGTATCTGATAAAGTTC CCAAAGTAGTTGTGGGAGATCCAAGAAGATTCCACCAGGTGATCACAAAT CTTGTGGGAAATTCTATCAAGTTCACAGAAAAAGGACATATATTAGTCCA AGTTCACCTTGCTGACCATGCACAAGTTGTCTTGGGGGCAAGTTCTGACG CCACCTTCAATGGATGGTCCAAAGGTGCAGCTTTATCAAGCGTTGGTAGC CAATTTAGAACTTTGAGTGGTCATGAAGCTGCTGATAATAAGAATAGTTG GGATACACTTCAAAAATTGACTGCTGATGAATTTCTGTCTAATACTTCCA ACAATGTCACTGGTCCTGACGAATCATTTCAAAATGTCACATTGATGGTA TCTGTTGAGGATACAGGGATAGGGATTCCGTTACGTGCACAAGAGAGGGT GTTCATGCCATTTATGCAGGCAGACAGTTCAACTTCTCGAAATTATGGGG GAACTGGTATTGGATTGAGTATTAGCAAGTGCCTAGTTGAGTTGATGGGT GGTCAGATAAACTTTAATAGTAGTCCACAAATTGGAAGTACATTTTCATT TACTGCCGTCTTTAAAAGGTGCCACAAAATTGCAACTGGTGATTTAAAAA AGTCTCTGGCAGGTGATCTCTCTGTGGCATTTGTAGGACTGAAAGCAATT TTAGTTGATGAGAGACCAATTAGAGCTGCTATAACAAAATATCATTTAAA AAGGCTTGGTATTCTTGTGGAAAGTGTCGATAACATCCGGTTAGCAGCTA CAATATCTGGGAAAAATGTTTCACAACCAGACATGATTCTGGTTGAGAAG GATTCCTGGTTATCTACTGAAGATGGTGGGTCAAATCTACGATTATCAGA ATGCAAGCAAGATGGACAGAAGAACTTATCAAAGATGATCCTTCTTGCAA CTAATATCACCAGCTCCGAGTCTGACAAAGCAAAGGCAGCAGGTTTTGCA GATACTGTGATAATGAAGCCCTTGAGGGCAAGCATGGTGGCAGCCTGTCT TCAGCAGGTGTTTGGAACAGGAAAAAAACCACAATTGAAAGGAATGATTA ATGGATCCATCCTTCGAAGTTTGCTTTGCGGCAAGAAGATACTGGTAGTT GATGACAACAGGGTGAACCGCAGGGTTGCTGCAGGTGCACTGAAGAAGTT TGGTGCTGATATCGAGTGTGCTGAGAGTGGTAAAGATGCACTTGCATTGC TTCAGATTCCACACAGTTTTGATGCATGTTTCATGGACATTCAAATGCCT GAAATGGACGGTTTTGAGGCAACACGCCGTATAAGGATGTTGGAGAGCAA AGCAAATACGCAGATAAACAACGGTTATGTCATCAGTAAATCTGCACAAA CTACCGAATGGCATTTACCCATTTTAGCCATGACGGCTGATGTTTTCCAT GCCACACATGAAGAATGCCTGAAATGCGGAATGGATGGTTACGTTTCAAA ACCATTTGAAGAAGAGAACATCTATCAGGCTGTCGCTAAATTCTTCAAAC CTAAACCAGTATCCAGTCCATAG

Pep:

>DCAR_026815pep MGMKMQGHHMVAVRLNDPFGTKRKYTFVNRVWLPKILFLWIMIMVFASRV IYDRMDAENKERRKEVLVSMCDQRARMLQDQFNVSVNHVHALAVLVSTFH YYKFPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVNSEREDFEKQHGW TIRTMEREPSPYRDEYAPVIFSQETVSYIESLDMMSGEEDRENILRARST GKAVLTSPFRLLGSHHLGVVLTFPVYKFKLAPNPSVEQRIEATAGYLGGA FDVESLVENLLGQLSGNQAIVVNVYDITNPSDPLIMYGREHQDFDISLER VSMLDFGDPFRRHQMICRYLQKAPTAWTAITTASLIFVIGLLVGYMIYGA ALHIVKVEDDFHQMQKLKVRAEAADVAKSQFLATVSHEIRTPMNGILGML ALLLDTDLSSTQRDYGQTAQACGKALITLINEVLDRAKIEAGKLELEVVP FDLRSILDDVLSLFSEKSRHKGVELAVFVSDKVPKVVVGDPRRFHQVITN LVGNSIKFTEKGHILVQVHLADHAQVVLGASSDATFNGWSKGAALSSVGS QFRTLSGHEAADNKNSWDTLQKLTADEFLSNTSNNVTGPDESFQNVTLMV SVEDTGIGIPLRAQERVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMG GQINFNSSPQIGSTFSFTAVFKRCHKIATGDLKKSLAGDLSVAFVGLKAI LVDERPIRAAITKYHLKRLGILVESVDNIRLAATISGKNVSQPDMILVEK DSWLSTEDGGSNLRLSECKQDGQKNLSKMILLATNITSSESDKAKAAGFA DTVIMKPLRASMVAACLQQVFGTGKKPQLKGMINGSILRSLLCGKKILVV DDNRVNRRVAAGALKKFGADIECAESGKDALALLQIPHSFDACFMDIQMP EMDGFEATRRIRMLESKANTQINNGYVISKSAQTTEWHLPILAMTADVFH ATHEECLKCGMDGYVSKPFEEENIYQAVAKFFKPKPVSSP*