DCAR_031167 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_031167

Identifier:

DCAR_031167.gene

Locus Tag:

DCAR_031167

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 2 relationships.
Relationships
The mRNA, DCAR_031167, is a part of gene, DCAR_031167.
The genetic_marker, MK010895 9_33203484, is located in gene, DCAR_031167.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_031167	DCAR_031167.mRNA	mRNA	DCARv2_Chr9:33195678..33204150

Sequence:

ATGTATCCAGGAGGCAATCCTGAACTTCTTCTCTGGAAGAATTCATCAGG
ACTGATACTTTGGAGGAGTGGCGTCTGGAATGGCTCTAATTTCAATTCTT
TTTCAATCGGTCAGGCGAATTTCAGCTACATCAGAAAAAAGCAGGCTAAA
TATTTTACTTACAACGTTCCAGCATCCCTCACAGGCAGATTTGCCATGAC
TAAAGAGGGACAGATCAATCTGTGGGTGAGAGCGGAAAATCAAAAGTGGA
GATTACATGTATCCATCCTTGCAGAAGATTGTAATAGGTTTGGTTTCTGT
GGTCCAAATGGAGTCTGCAGCACGCTTTCAGTCCCTACTTGCAGTTGTTT
CAAAGGTTTTAAGATTCGTTCACCAAAACAGTGGAAGTCTGCTAATTGGT
CTGGTGGATGTATCAGGATTAGGCCCCTGCAGTGTTCCAATACTGAATTT
TTTTATTTTTCTAATGTTTCAATGCCTGCTAATGCAAAATCTATGAATTC
AGAGAGTCGAAAAGTTTGTCAGTATGCATGTCTGGGCAACTGCAGCTGCA
ATGCTTATGCTTACAGTGACGGCAAATGTTCATTATGGTATGGTGATCTA
CTAAATACAGTAGTCGGTGGCCGGATTTCTTTAGGAAATCTATACGTCAG
ACTGGAAAGTAAGAGTTATTTTCAACTTTAAAGTAATTTAAGGCCATTTT
ATTTTATGTAATTGTTTCTTTTTCTTTTTTGTGGTCAAGTTCTAAGATCT
TACTTAATATCTTCTCTTATAACCAAAGACAAAAAGCTGTCAAATGCTCT
GCTGGCGGCTTTCATTACCATTCCAGTTCTCATCTGCATTTCATTGATTT
ACATATTATGGCATATCTGGAGAAGAAGACATAACAAGAAAGGTAACGTT
CCAGTTGTTTCTGAATTCTAAGTCTCAGGCTTGTCTTTCGGTTCACTGTT
TTAATATTACACATATTTTCTGCTTCCAGAATACATGTTTGCCTCTACCG
ATCTACTGACTAGCATTTCTCTACTGGTTGAATTTTACAATACCAGGAAA
AACAGGTGAGAATTTATTAAATCTCAACTGGGACACTAGCAGCCAACAGA
ACACAGATAGTAATAGCATCACCACTAGCAGCCTACTTGGAGGAGAGAAG
AAAGTTCCTAATTTGCCACAGTTTAGCTTTTCAAGCATATCTGCTGCCAC
AAATAACTTCTCAGACCTGTTTATAAGGTTATTTCTTTATTTTAAAAAGA
TGAGAATCTATACAAAGAGGTCTCAGTAAACAGTTTCTGGAGAAGATCAT
GTCATGGAACCGCAATCCTATTTTAACAATTTAGAAAATTGCGTTTATCA
GGAAAAGTTAAGGTTTTAAATGATTATGATCTATCTTACACATATCTGAA
ATACTTTTGTAACACGGTCTTTCAGGGTAACTTACTTGGAGGGAGATCAG
TAGCAGTTAAAAGACTTTCTAAAGGGTCTGGACAAGGGCTAGAAGAGCTG
AGAAATGAAACAGTTCTAATTGCTAAACTCCAACACAGGAATCTTGTTAG
ACTCCTGGGATGTTGTATTGATCAAGATGAGAAGATTTTAATTTACGAGT
ACATGTCCAACAAAAGTTTGGATCATTTTATTTTTGGCAAGTGGTCAGCA
AATTATTTTGTTATATATGCAGTATAGATGAACATTTATTAAGAACTATT
ATTTTTTTATCCTGGTATTTCATTTGAAGTATATCGCTATGGCAGATTCC
AGTAAACAAAGTCTACTTGACTGGAGAAGACGTGTCCACATCATTGATGG
CATTGCACAAGGACTTCTTTATCTTCATCAACATTCAAGATTACGCATAG
TTCATAGAGATTTGAAGGCTAGCAACATCTTGTTGGATGATGAACTGAAT
CCTAAGATTGCAGATTTTGGGATGGCCAGAATATTTGGTGGGAATGAAGT
GCAAGCAAATACCAAATGAATTGTGGGAACTTAGTAAGTAAAATTCAACT
CCTGCATTACTCTATTTGACTAAACCTATTACTGTCAGTAATGTTTTTCC
TTTAATGGTATCAAATTCAGCGGTTATATGTCCCCAGAATACGTCATAGA
AGGACTATTTTCAATAAAGTCTGATGTCTTTGCCTTCGGTGTCTTGCTAC
TGGAGATCATAAGCGGGAAAAAGAACACTGGTTTCCGCCACTCTGATTGC
CTTACTCTTCTTGGACATGTAGGTTTTCTCTTACTTGGCATCTTTAAGTG
TTTGTGCATTGTTAGTACGTTACGTTTAAGTAGTCTTGCTATTGTCCATA
CTATTCAGGCGTGGGAGTTGTGGCAATCCAACAGGGTTCTGGAGCTGGTG
GACTCGAATCTAGACATCCCTTCTTCCTTTGTGCCAATGAGACTCATTCA
TGTCGGTCTCTTGTGTGTTCAGGAAAGTGCTGCAGACAGACCAACCATGT
CTGATGTCTTGCTTATGTTTAGCAATGAGCACAGTCAGGTGGTTCCTCCC
AAACGCCCTGCTTTTACCTCTGGTGGTAGCTCAGGCTTCGAGATAGACAA
AGACAACAATGTTTCAGTGAATACTCTAACAGCTTCAGTGATGGATGGTC
GCTGATGTTTCCTACCATTCATATCACATACTTCTTACACCCTTCTTTAA
GGAAACACTTCAAGACTTGGCTTCCCTCTCGTAGGTGTCCGCTTCTCTCG
ACTTTCTATACACTAAGAACTACTTTTTAATTACGTGGAAGATTTTTGTT
GGCGGAGATTCTTAAAAATTATAATTTCCACCAAGTCATGTGTTCATTCC
TTTCTGCTTGTTTATCAAACTTGACTATACATGCCAATTCAACGGCATTT
ACATGAGTTCAGAAGCTTTCACAAGCGAAATATGATTATGAAACTCGCAC
ATTTTATATTATCTGATTAATACAATTTTTTCAAAATTTACAGGACATTT
ACAGGACATGCAAAATCGAAAACATATGCAAAAACTTGTCTAAATTATAT
ATTATCGGAGGTTCTCGAAATTCATATATAGGAAAATTGAATTAAAAAAC
ATAATTTATATTAACCCAATTTAAATGAATCTTTCTAGATTCAAAAATCT
AAATTTGTTCAAAATTCAGAAAAGCAAAAAAAATCTAACAATTTAAGATT
TTCATAAATAAACATCGAATATATTTAAATTTAATTTAATTAACTCGCGA
TTGGGCCTAGAAACTATTAAGAGCAGCATGGATCAAACATTTGAAAGATC
ACCGGGCCGCCAAAGTCCATCAACCTCATTCTTCATCGTCTCCTACACCG
CCGAAAACCAGGTTTCAATGTCTCAATTTCATCGCTCTTAACTTCATTTA
ATCATATTCTAGGGCTATATTTGAATACCCTTTTAGTTTAACATTATTGC
ATTCTTGTTTATTTCATTTTGTGAGCTTCATTTCACTCTGAAGCTCACAA
ATTGATGATATGTATTCTATATATAGACCACCAATCTGATATGTATAGAG
CTCTTGGATGGAAGCGTCTCTCGTATCGTTTTAAGATTGCCCATTTTGTT
AAAACTGGTCTTATTGATAAAGCACTCCAGTTGTTTGATGAAATGTCTCA
GTCAGATTGTAGGGTTTTTAGTGTTGATTATAATAGGATTATTGGGGTTT
TGGTTAAGCATTCTAGGTTTGAGTTAGCTGAGGAGTATTATGCGAAGATG
GGTCCGAAAGGGTTTTCGTTGAATTCTTTTACTTACTCGAGGTTTATTAG
TGGGTTGTGTAAGGTTGGGGAGTTTGAAGTTATTCAGAGGCTTTTGGAAG
ATATGGATAAAGTGGGGGTGGTTCCGGATATGTGGGCGTGTAATTTGTAT
TTGAATCTTTTGTGTTCGGAGAGTTTGGTTGATGTGGCGTTGGAGGTTTT
GAGAGTTATGGGTGAGAAGGGAAGGGAGCCGGATGTGGTGAGTTATACTA
TTGTTGTTAGTGGGTTGTGCAGGGTGAAGAGAATTGATGATGCTGTTAAG
TTGTGGTATTTGATGATTGGGAAAGGTATTGTTCCGGATGATAAGGCTTG
TCGGGCACTTGTTCTTGGTTTGTGTGATTGTGGGAAGGTTGATTTGGCTT
ATGAGCTTACGTTGGGTGACTTGAAAGGAAGAGTGGAATTTAGCACGGGG
ATTTACAATGTACTTATATGCGGATTTTGTCAAGCTGGGAGGATTGATAA
AGCACAGGCAATTAAAACGTTCATGAGAAGGAATGGGTGTAAACCAGATT
TGGTTACTTACAATGTGCTGTTGAATTATTGTTGTGATGAGCTGATGTTG
GACGAGGCAGAGAAGTTGGTAGATAAGATGGAGAGAGGTGGGTTGAATCC
CGATAGCTATAGCTACAACCAACTCCTCAAGGGCTTTTGCAAAGCTCACC
GGATTGATAGGGCGTACAAGTTGATGGCGAATAAAATGAGGCTGAAAGGC
TTAGTAGATGTTGTATCATATAACACAATAATTAGAGCACTCTGTGGAGC
TTCTCGTACTGAGCAAGCTTATAAGATACTGGAGGAGATGGCCCCTAATG
GGATTTCTCCTGATGTGGTAACATTTTCAATTCTTATCAAAGCCTTTCTT
AGAGAAGGCAGACCCAATTTAGCCAAAAAGCTTCTTGACCAGATGAGAAT
TTTGGGCTTGTCACTTGATCGTGTGATGTATACAATCATTGTTGATCACT
TGTGTAAGACCGGGAGAACTGGAATGGCTCAAAGCACATTCCGTGATATG
ATAGAGCAGGGGATCACCCCTGACGTTGTGTCGTACAATGCACTTATTAA
TGGGTTTTGCAGGGCATCTCGAGTGTCTGATGCGATGGTTTTATATGAGG
AGATGCAGACCAAAGGAGTGCATCCAGATGAACTTACTTTCAAATTGGTT
ATTCGAGGTCTTATACAGGAAAAGAAGCTTTCAATTGCTTGCACAGTCTG
GGATCAGATGATGGAGAAGGGCTTCACACTTGATAGAGATGTTTCTGAGA
CACTTATCACTGCTATATCTGACAATGCATCCCGCAGTAAGACAAATGGT
TTGTGTATAATCTTGCCTTAAAATTTGGAACTGTCTTGCATGCACAGGTT
ATAGTAATTTGCAGTACCTTTAGTATTGAATAAATTAAGTAGTCTACCTC
TCTTTTTCTTGGTTTTCGAACACTTGGGTTTCTTCTCTGGTTGGGGTTAA
TAGTGGGGAAATTGTTATCCATATGCATTTTAGACGGGTTTAAAGACATT
GAGGATGCTGCACAAAATTAGTTGCATTTCGCAGGAAAGTACTAGGATGT
TTCTAGATATATAATTGGCGAATTATTGTATATAGTAAATATGGATCCTG
GTTAGTAATGTAGATATGTTGGTGTCACTTTTTCCAGGGTGATTATGCAA
TTTCTTACATCGTGCTGAAAGTCTCAAAATTGCTGATGTGCACGCATGTG
AAGCGTCCGTGCTTTTCCTGCTTATCTACGGATGCAGAAGGAAAAATAAG
GTTCACTTTTTTTTTTTTTTTTTCCTGTCAAGCATTATACAACTTGCAGG
ATAATACTCCCTTGCTATCTTCGAGGTGTTCGGTCCTTTAATTTTTTTCT
TTAACTTAACATAGAGCTAATGTGTATATCACTGAGTGACAATTATTCTC
ATATATAATCTTCTTTGTTGTTTTCCTTGTGATTCGAAATATGCAGAACT
TGCCCATGTAGTTATATATAAATGTGGTCGTACCTGTCCAGGTTCAAAGT
AAAAGTCTAGTACTGGTCTTTATAATCTGTCATTGCTTTAATAAAAAACT
CATGTTGTGTTTGGTTGAGTGGAGTCGAATGGAATGGCATAAAATAAATG
AAAATAATAGGGGTAAGAGGTAAGTTTTGAAAAAATGAAATTGAGTGAGT
GCAAAATTGTTATGATGAGATTTGAGAAAAAATTGTGTATAGGAGAGAAT
GGAGTATTACTTCTCAGATTGTGGTTGTGATCTCTAGTATAGGGAATGGA
GACTGGAGAGAATGGAGTATTACTTCTAGCATATGGGATGGAGGATAAAA
TGAAATTTTCAAAAACAATTGGCCATAACATAGTACAAATGTTATTCTAT
TCCTTCCAAATTCATTCACTCCAACCAAACACAACATTAGCATTTCATTG
TGATATTTCGCCTTTTATATGCACTCAGTCAGACTCTTTAATGGGGAGTA
GTACATTAACGTAAATCTGTGTTCTCCTATATGCCTGCTTGTTTACTGTA
ACTTAAACCTCTTTGTATCATGATATCTAGCTTCCTGTTGGTTTATATTA
CCATCTCTCGTACCTACACAAACACCCTGAAGTAACTGTTTAGGCTAACG
TTTGTTCTTGTATGCTTAGGTGACCATAAGTTTTACTGGAAGCTTATTCT
ACTGGTTACTTTGTTCATCCCTGGAATAGTATGAAGTTCTATAAGGGTTG
CCTAGATGAATGGCATGGTATATAGCGCACGTGTGGTATAATATCGCACA
TCTCTAGCGCGTGTTCGTAATACAAGCCATCCTATTTTTCAGAATCATAC
AAGGGGGAAATGTGCAGAAATTTCTTTTTGCATGTTCCAAGGTTATGTGG
ATATGAGAAGAAAACTTCTAACAACGGGTCAATCTCCCAGAGCTGCATGT
CATCCAACATTCCATAGTTGCTGCTTTGGACATAAAGGCCCATCTAACGT
AAGCTGGCCTTGGCGATCGCTGGTGCTGGAAATTTTTGGTAAATGCTTCT
TTAACATTACAATCATCATGTCAAATTCATGATATACAAAATGTTATAGG
CTCATTTTGATATTAACATATTTGTTTATAATTTTTGTAAGAAACAAAAA
ATCTTATTAAATCAATGTCATACACTAAAAACAATACATAGTAAAGTTTG
AATTAGTGCTTTTAGCAATGGCTGTGGGCCTGTGGCTGTTTGTAATTTTG
TTTAATAGTATTACGGTAAAGGTACTCTGTCAACTGAAACCAGATGAAAG
TAGCACCTTAAATTCTTGATCGAGTGAATTCATTTTAATTATCGAATTAG
TTGATTTTTCTTGCAAGTAGGTTACCATTTGTGAAATAGCATGTCTAAAT
GTATTTGAGTCTGATATAAGGGATTGCTTTGATGCATAAAACTAAAGCAC
ATATTTTGCAAAAGTAAGGGAATCACAGAGCTTTACTTGCTCTCTGGTCT
ATGTTATATCCTGATTCTTTGCCTGTATATTAAGTCCTACTTCGAAGTTC
TCCCCAAGCCATTCTTCACATATGGAAATCCATACTTTCCCATATTAGCA
ATACTCTACTAGAACTTGCTTCAGCTTGTCCTCTGGAAACGTACGAGCAC
ATAAACCAAATGTATCGCCCACGTGAAACCAACCCGCATTTTCTCTCCTT
ACAACCAGTAAACCAACCTCAGCCACCTGAGTCTATCATCAACCAACCCT
TGCTCCCCTCGCAGCCACCACATCAACAGCACCAGCCACCCCTGTCACAA
CCCAACCCTGGCATTGACTTGCCTGTACAGCCACTGCCCGGTCCCAGTTA
TGAGGTGCCTCCTCAACCACAACCACGACTACAGCGTCAAGGTAAACGAA
GGGAGCGACGTGGAGCTGGCCTTCTGTCTGATCCTACACGGCCACAACCC
GGTGCTGGCCAAATGTCGGATCCCAATCGGCCACCATTTGCTGCTGCCCC
CCTGTTGGATCCCACACTCTTACAACTCGGTCCTGACAATCACTCCCCTC
CACACTCACAAGCACGTCGCCAACGACAACCTCATGATCCTGAACTTCTT
GTTGCTGCTTCACCAAAAACACCCAAAATGCCAATGCATTCAGATCATCC
AGCAGCTCACCAACAGCATCAATCCTCAGCTCAGAATATCATCCCACCCC
GCAAAACCAAGCCTTTTACATGGTGTATTGCCATCTTCTGTGCAATCTTC
TGGGTTCTGTTCATTTTAATAGGCCTTATAATCCTCATAGTGTATCTTGT
AAACCACCCGAAAAGTCCAAAGTTTGATGTCGCGGGAGCAAGCCTGAATG
CAGCATATCTCGATACAAATAATCTCTTCAATGCTGACCTTACCATCTTA
ACCAACTTCACGAACCCAAACAGAAAACTAAGTGTGAACTTCAAACACAT
TGTTATCAGTCTCTACTTCGATGGAGTTCCTATTGCCACAGAGTACATTG
ATCATTTCCATTTAGGAAAGGCACAATATTTGCTTGCAAATGTTCAAATG
TTGACAAGCCAGGTTAGGCTCTCTCAGGTTCGTAGCCAAAAGCTTGCAGG
GCAGATTGGAAGCGGCAGAATCAGCTTCGATGTTAAGAGTTTCTTTAGAG
CAAAGTCGAAATCGGGAAATGTTCTCAAGTATTCATATTCGTTGCATGGT
CTATGTAGTATCGTTATGACACCTCCACCTGGTGGAGTTTTGGTGGCGAA
AACTTGTGAAACAAAAAGCTAA

Sequence Length:

8472

Sequence Checksum:

6de6c6d339d15b32e992dfcaea50aaf4

View location in JBrowse:

DCARv2_Chr9:33195679..33204150+

Cds:

>DCAR_031167cds ATGTATCCAGGAGGCAATCCTGAACTTCTTCTCTGGAAGAATTCATCAGG ACTGATACTTTGGAGGAGTGGCGTCTGGAATGGCTCTAATTTCAATTCTT TTTCAATCGGTCAGGCGAATTTCAGCTACATCAGAAAAAAGCAGGCTAAA TATTTTACTTACAACGTTCCAGCATCCCTCACAGGCAGATTTGCCATGAC TAAAGAGGGACAGATCAATCTGTGGGTGAGAGCGGAAAATCAAAAGTGGA GATTACATGTATCCATCCTTGCAGAAGATTGTAATAGGTTTGGTTTCTGT GGTCCAAATGGAGTCTGCAGCACGCTTTCAGTCCCTACTTGCAGTTGTTT CAAAGGTTTTAAGATTCGTTCACCAAAACAGTGGAAGTCTGCTAATTGGT CTGGTGGATGTATCAGGATTAGGCCCCTGCAGTGTTCCAATACTGAATTT TTTTATTTTTCTAATGTTTCAATGCCTGCTAATGCAAAATCTATGAATTC AGAGAGTCGAAAAGTTTGTCAGTATGCATGTCTGGGCAACTGCAGCTGCA ATGCTTATGCTTACAGTGACGGCAAATGTTCATTATGGTATGGTGATCTA CTAAATACAGTAGTCGGTGGCCGGATTTCTTTAGGAAATCTATACGTCAG ACTGGAAAACCACCAATCTGATATGTATAGAGCTCTTGGATGGAAGCGTC TCTCGTATCGTTTTAAGATTGCCCATTTTGTTAAAACTGGTCTTATTGAT AAAGCACTCCAGTTGTTTGATGAAATGTCTCAGTCAGATTGTAGGGTTTT TAGTGTTGATTATAATAGGATTATTGGGGTTTTGGTTAAGCATTCTAGGT TTGAGTTAGCTGAGGAGTATTATGCGAAGATGGGTCCGAAAGGGTTTTCG TTGAATTCTTTTACTTACTCGAGGTTTATTAGTGGGTTGTGTAAGGTTGG GGAGTTTGAAGTTATTCAGAGGCTTTTGGAAGATATGGATAAAGTGGGGG TGGTTCCGGATATGTGGGCGTGTAATTTGTATTTGAATCTTTTGTGTTCG GAGAGTTTGGTTGATGTGGCGTTGGAGGTTTTGAGAGTTATGGGTGAGAA GGGAAGGGAGCCGGATGTGGTGAGTTATACTATTGTTGTTAGTGGGTTGT GCAGGGTGAAGAGAATTGATGATGCTGTTAAGTTGTGGTATTTGATGATT GGGAAAGGTATTGTTCCGGATGATAAGGCTTGTCGGGCACTTGTTCTTGG TTTGTGTGATTGTGGGAAGGTTGATTTGGCTTATGAGCTTACGTTGGGTG ACTTGAAAGGAAGAGTGGAATTTAGCACGGGGATTTACAATGTACTTATA TGCGGATTTTGTCAAGCTGGGAGGATTGATAAAGCACAGGCAATTAAAAC GTTCATGAGAAGGAATGGGGCATCTCGAGTGTCTGATGCGATGGTTTTAT ATGAGGAGATGCAGACCAAAGGAGTGCATCCAGATGAACTTACTTTCAAA TTGGTTATTCGAGGTCTTATACAGGAAAAGAAGCTTTCAATTGCTTGCAC AGTCTGGGATCAGATGATGGAGAAGGGCTTCACACTTGATAGAGATGTTT CTGAGACACTTATCACTGCTATATCTGACAATGCATCCCGCATCCTACTT CGAAGTTCTCCCCAAGCCATTCTTCACATATGGAAATCCATACTTTCCCA TATTAGCAATACTCTACTAGAACTTGCTTCAGCTTGTCCTCTGGAAACGT ACGAGCACATAAACCAAATGTATCGCCCACGTGAAACCAACCCGCATTTT CTCTCCTTACAACCAGTAAACCAACCTCAGCCACCTGAGTCTATCATCAA CCAACCCTTGCTCCCCTCGCAGCCACCACATCAACAGCACCAGCCACCCC TGTCACAACCCAACCCTGGCATTGACTTGCCTGTACAGCCACTGCCCGGT CCCAGTTATGAGGTGCCTCCTCAACCACAACCACGACTACAGCGTCAAGG TAAACGAAGGGAGCGACGTGGAGCTGGCCTTCTGTCTGATCCTACACGGC CACAACCCGGTGCTGGCCAAATGTCGGATCCCAATCGGCCACCATTTGCT GCTGCCCCCCTGTTGGATCCCACACTCTTACAACTCGGTCCTGACAATCA CTCCCCTCCACACTCACAAGCACGTCGCCAACGACAACCTCATGATCCTG AACTTCTTGTTGCTGCTTCACCAAAAACACCCAAAATGCCAATGCATTCA GATCATCCAGCAGCTCACCAACAGCATCAATCCTCAGCTCAGAATATCAT CCCACCCCGCAAAACCAAGCCTTTTACATGGTGTATTGCCATCTTCTGTG CAATCTTCTGGGTTCTGTTCATTTTAATAGGCCTTATAATCCTCATAGTG TATCTTGTAAACCACCCGAAAAGTCCAAAGTTTGATGTCGCGGGAGCAAG CCTGAATGCAGCATATCTCGATACAAATAATCTCTTCAATGCTGACCTTA CCATCTTAACCAACTTCACGAACCCAAACAGAAAACTAAGTGTGAACTTC AAACACATTGTTATCAGTCTCTACTTCGATGGAGTTCCTATTGCCACAGA GTACATTGATCATTTCCATTTAGGAAAGGCACAATATTTGCTTGCAAATG TTCAAATGTTGACAAGCCAGGTTAGGCTCTCTCAGGTTCGTAGCCAAAAG CTTGCAGGGCAGATTGGAAGCGGCAGAATCAGCTTCGATGTTAAGAGTTT CTTTAGAGCAAAGTCGAAATCGGGAAATGTTCTCAAGTATTCATATTCGT TGCATGGTCTATGTAGTATCGTTATGACACCTCCACCTGGTGGAGTTTTG GTGGCGAAAACTTGTGAAACAAAAAGCTAA

Pep:

>DCAR_031167pep MYPGGNPELLLWKNSSGLILWRSGVWNGSNFNSFSIGQANFSYIRKKQAK YFTYNVPASLTGRFAMTKEGQINLWVRAENQKWRLHVSILAEDCNRFGFC GPNGVCSTLSVPTCSCFKGFKIRSPKQWKSANWSGGCIRIRPLQCSNTEF FYFSNVSMPANAKSMNSESRKVCQYACLGNCSCNAYAYSDGKCSLWYGDL LNTVVGGRISLGNLYVRLENHQSDMYRALGWKRLSYRFKIAHFVKTGLID KALQLFDEMSQSDCRVFSVDYNRIIGVLVKHSRFELAEEYYAKMGPKGFS LNSFTYSRFISGLCKVGEFEVIQRLLEDMDKVGVVPDMWACNLYLNLLCS ESLVDVALEVLRVMGEKGREPDVVSYTIVVSGLCRVKRIDDAVKLWYLMI GKGIVPDDKACRALVLGLCDCGKVDLAYELTLGDLKGRVEFSTGIYNVLI CGFCQAGRIDKAQAIKTFMRRNGASRVSDAMVLYEEMQTKGVHPDELTFK LVIRGLIQEKKLSIACTVWDQMMEKGFTLDRDVSETLITAISDNASRILL RSSPQAILHIWKSILSHISNTLLELASACPLETYEHINQMYRPRETNPHF LSLQPVNQPQPPESIINQPLLPSQPPHQQHQPPLSQPNPGIDLPVQPLPG PSYEVPPQPQPRLQRQGKRRERRGAGLLSDPTRPQPGAGQMSDPNRPPFA AAPLLDPTLLQLGPDNHSPPHSQARRQRQPHDPELLVAASPKTPKMPMHS DHPAAHQQHQSSAQNIIPPRKTKPFTWCIAIFCAIFWVLFILIGLIILIV YLVNHPKSPKFDVAGASLNAAYLDTNNLFNADLTILTNFTNPNRKLSVNF KHIVISLYFDGVPIATEYIDHFHLGKAQYLLANVQMLTSQVRLSQVRSQK LAGQIGSGRISFDVKSFFRAKSKSGNVLKYSYSLHGLCSIVMTPPPGGVL VAKTCETKS*