DCAR_004550 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_004550

Identifier:

DCAR_004550.gene

Locus Tag:

DCAR_004550

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 3 relationships.
Relationships
The mRNA, DCAR_004550, is a part of gene, DCAR_004550.
The genetic_marker, MK008636 85036.37298, is located in gene, DCAR_004550.
The genetic_marker, MK009416 1_49169435, is located in gene, DCAR_004550.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_004550	DCAR_004550.mRNA	mRNA	DCARv2_Chr1:49161677..49170098

Sequence:

ATGGCCTGGGGAAACATATATACTCGGCGCGTGAAAGTTTTCACGTTGGC
TCTTGTAATGTACTTGGACTATAAGGTAAATGAATTTCTTTATTCCTTTT
CATTTGCTACTGAGATATTGAATGTCAAGTACAACTTCTTTTGGGAGTTT
ATGTAACGTGTCATTAGTTTCTTGTCTTGTGGTTGGATTGATTTAGGCTT
TGCAAAAGAGAGAGAAATGGGTGAGTAAATCTAAACGAGATGCCTTGTGG
GAAAAGCTTCATGAGCGCAATGCAAAGCGAGTCCTGAAGGTTATAATTGA
ATTGGAAGGAATGTGGGTGAAACTTGGACAGTACATGTCCACACGTGCCG
ATGTCCTCCCGGATGCATATATACGCGTGCTTACGCAGTTGCAAGATTCT
CTTCCCCCTCGCCCTTTAAAAGTGGTAATGCTTTTCAAAAATCTGTTTTA
AGATTAATAAAAATGTCGGCCTTTACAATTTTCCATACTGAGTTATTGTA
TTCAGAAGGCAAAAATAAGTTAAAGCAGAGTTAGGCATCAGCATGTCTTA
CTTACCTATAACTAGTGAATGTTATGTTGGGAAAAGTATTTTGCCCCAAT
ATTTAATACTGTGCAAATTATTGAATAAAAAATCTAGGCGTTTTTGAACT
GAATATGAGAACTGTTAAAGAAACATCGTATTTAACTAATTAATCTCTTT
TTTCCTCACAGGTTTGTGAGACCATACAGAAAGAATTGGGAAAATCAATG
GGGGATCTGTTTCTAAATTTTGTTCAAGTTCCTCTGGCAACCGCATCAGT
AAGATCCTTGTACCATATAGTATAATATATAGCAGCAATACTCAATCTTT
GACCTTTGTGGAGGTGGTTTCAAGTTCTCTCGGGATTGATTGTTTGAACT
GTGACAACGTGGAGTTTTATTTAGCATGTTGTTTCTCCTCTGTTGCTTTT
CCTAATTCCAGATAGCCCAAGTTCATCGTGCGACCCTAACTGATGGACGG
GAAGTGGTTGTTAAAGTTCAGCATGAAGGCATCAAGGCAATTATCTTGGA
GGTCGCTCATACTTTTTTTAGTTTTATCCCAATTTGGGCATTATATTTCA
ATTTGATCTTATGAATTGATTTGTTGGTATATTTTTGGTGCAGGACCTGA
AGAATGCAAAATCCATTGTTGACTGGATTGCGTGGGCAGAGCCGCAGTAT
GACTTTAACCCAGTTATCGATGAATGGTGCAAAGAAGCACCTAAAGAACT
GGATTTTAATCGTGAAGCTGGTGTGTGGAGTTTGTTAATAATAATAATCT
GTTGACTCTAATTTTGTTAATAATAATAATCTGTTGACTCTGATCAAAGC
GTCATCTTTCTTGCCACCTGTTAGAGAATACGAGTTTAATATCCAGAAAC
CTTGGTTGCAATGATCAACATGATGAGAAAGTGCCTGCTAATCACGTGGA
TGTCTTAATTCCCGAAGTTATTCAGGTAAAGAAACGGGCTGAACACACAA
AAAGTATCTATCAACATTACAAATTAAGGAACCCAATTGAAGTGTATAAA
TATATGTCAACATGACATTTCTTACAATTTACGAATTCTTAGTGGTGATT
TGGAGTGAAATTGCAATTCTAACAGTCACTTAAAATCCCTATTGCCCCAC
ACTACATATCTGTAGTCAAACTAAGAATCCCTATTGACCTACGGTATATA
TTTATATGACTACTTGAATAAATTATTTATATTATACAATGTATTGTAAA
ACACTAAAACCTATGTTTACTTTTAAGTAAAAAAGTATATTTTTACATTT
TAGTAGCTGATGTATGCATTTACAAATGTATTTTGCCATTTGTTCACTAT
ATAGCTACGAATATTGGTCATCCCAACTATTTTCAGCTATTTCTTATTAT
CATGTTATCATTTTAAATGTTTGTTAACAATGGCAGTCAACTGAAAGGGT
CCTCATCCTCGAGTATATGGATGGGGTTCGTTTAAATGACTTGGTATCAC
TTGAAAATTTGGGTGTTGATAAGCAAAAACTTGTTGAAGAAATTACGCGT
GCATATGCGCACCAAATTTATGTGGGTGGTATATTCAATGGTGATCCTCA
TCCAGGTACAGTTTTTTCTTCCCCTTCCTAAATCTTCAGCTAATTTCTTA
TTGGATTTTTTGCAGTAACATAGATTTTGTCACATTTTGTTTCAAATGTG
CATCTGATTATTCACAATTTTGATCGAGGGATCTAATTTTGTTTGGCTAT
ATATCTAGGGAATTTTCTTGTCAGCAAAGAGCCTCCACATCGTCCAATTT
TGCTTGATTTTGGTCTTACTAAAGTTTTGACGAGTTCTATGAAACAAGGT
TTAGCAAAAATGTTTCTGTCATCTGTTGAGGTTGGTTATCTTTTACCAAG
ATAATAATAATTAGAAAATTGTATCTGCAAGATATACTAGTAGATTACCG
AGCCCAAGAAATAATTTTCACATGATAATGGTTCATGAAGTTGAGAGAAA
ATTGAAAGCAGATTGTAGATTTACGTTAGGCCTTAATCCGGGATGTCAAT
TAGGATTCTTTAATCAATCGTTTTAAGGCAACTTGTTTTTCTTGAGTATT
AACGATTTATTACACCCAGAAATCTGCTGTTGGTTTGTAATATATTACTG
TCTGATAGCTGGTTCGTCATGAGATAAACTTTCTGAAATTGGTGAAATAT
GCAGATTTTGTTTGGCAGTTGAATATAGCCCAAGCCAAACTGATAACCTT
GTAAACCATTTTCAAAATCTGTCTCTATTATCTTCAATTTTTCTCCCAAT
TAGAACTTATTTATGCAAACCTCATCTCAATGTTTAATATTTTTCTCCAA
AATTGGAACTTACCCGTTTAACAAATTTTCTCTTCATTTGTAACAGTAAT
GAAACAAGTTACTATAATTTGCATTGCTCTAAAATGAATTGAGAGTTTAA
ATAGTACTTACAATATTATTATCTTTTACTCGATTCATACCGGAGAAAAG
GTTTTTTATTTGATTCAATATTGCATATCCATTGAGCATATCACTTTGTA
AACTTGGTACTTTATAAGTACCTCTTCAGTAGCTATGGTGTCAACTGCAG
GGTGATCATGTGGCACTTCTGTCTGCTCTTGCGGAAATGGGATTTAGATT
TCGAATGGACTTGCCAGATGAGGCAATGGATCTAACAGCTTTAATATTCC
GTAATTCAGCACCTACCAGAGAAGAAGATGTGAGTGACAGTTTAAAAATT
GGCATCCATGTTTATTATATGCCAGGAATCATAATATAGTTTGTTTTTTC
TTATTAAGGAACACTTGAAATCTTACAAGGAGAAAGCAAAACTTAAGAAG
GAAAGCTTGAAGCTCAGTCAGAAAGAATCTCGTCGCTTTAATCCTGTAAA
TATAAATGTCTTTTTCATTTTTGTTGCATAAACTATATTGTCCATGCATT
TGGTACATAAACATTAAAGTCTGCCATATCAGTTTAATTTTGCTAAAATA
TCTGTTCATATTAAATAGTTTAATAGTTAAAGTTTGTACCAGATGCTGTG
CAAGCTTGGTTTTAACATATTTACTGGAAATTGAAGGAAGCTCAGCTTCA
TAATGATAATAATATATAAATTTGTATCAGTCTCATTAGACTTGTCCATT
TTGTTTCTTTCTTTCCATAGCCAAGAACCTCATAAAGTTTATTTACAGGT
TGATGCTTTTCCGGGTGATATTGTGATCTTCAGTCGGGTTCTCAATCTAC
TAAGAGGTCTTTAAAAATTCTTTTGTGCTCATCTGTGATGTCGACTAATG
TTACTGATATAAACTGTAATCGATATCTGTTTAGGGCTTTCATCTATAAT
GAAGGTTCGCATAAATTATGTGGATATCATGAGGCCGTTTGCTGAATCTG
TTTTACAATGGTAGGTCTGTAATGTCTTAGAGTTTTTCATCTTGTGATCC
CTGCCTTCCAATTAGGTTACATAATTTTAAAACAAGCTGCTTTCAGCAAT
ATTGATAATGGCCCGAGATTAAATGCGCAATGGATATACAACACTCCTGT
TCATTCTGATGTGGAGGCAAAATTGAGGAATTTATTAGTTGAGCTGGGGA
ATGCTAATAAAATTCTTGGAATACAGGTACATATATGTGGATATATTGAT
ATTGGACATAATAGCTTACTATTTAATTTTTCAGTTATTTCCTCTGGAAG
CCTTTCTTACTGCACTCAGTTATAATGGAACATGAGAGACATTGTCATAA
GTAGTCAAGATAAGATCTGTAGTTCTTTCAAAACTGTGAACCATGGATGC
AATTGCATGCATATTACACATTAAATACTTTAGTCACAGGCTCACAGCAC
AATTACTCGCATGAATCTTTTAAGAATCAACAGAATCAATATTGACTATA
ATTTTGCTGAAAATGTTACTTGAAAACGTTATGGAGTAACTTCCTATTTT
TGTTGGCAAAGCCGTACCGTAGTTCTATTGTGTGCCTGATGTTGTAGTCT
GGGAGGCATCTCTTAATGTTGTATTATCGTAATACATTATGTTCTATGTA
ATCTTGACTTTAGGTATGTGCCTACAAAGATGGGCGAGTGATTATTGACA
CTGCTGCTGGTGTGCTCGGAAGATATGATCCTCGTCCTGTTCAACCTGAT
ACCCTATTTAATGTGTTCTCTGCAACAAAGGGTATCACAGCCGGAATGGT
ACATTGGCTTGTTGATAATAGGTGTGTAATCGATTCTAGATCTGCTCTAT
TATAACATTTCTTCAGATCTTTGTTGTGTTATCTGTTAAAATGTTATTAT
TCTACTATATTCTAATATGTACTCACCAGTCCAGTTAGTCATTTACATTG
CTGTGCAAGAATGAATGATTACATCTGACATAGCAATCGATATATGTCTA
CAACAGCTCTATCTTAAATTGCAAAAATTTTCGATCACTTTTTCAAGTGA
ATTAGGGAGCAATCAGGTCATCTTGACTTGTCCAGAACAGAAGTAAAAAT
CAGGGCATCTTGTCCCACAATGATCTTGCCGTATGATGTCCTGACCATCA
TTTAATTTAGTAATAGACTTTAAAATATGTAGCCAACATGTCTGACTGTT
AGACAAACTGTTACACCATGATTGCCCAATGAACTATGGTAATTGGACGA
TTTCATTTAAATTTTGTAGCCATGCTCTCAGCAAGCCTCAATATTTCTTT
GAACTGGGGCTTTCTTCTACTGATATATATATGAAATATTAAGAAGCGAA
AACAAGTGCATGGAGTTCGGGTCTTCTTAGGTGGTTTCCTTATATGATCA
TTAGTACTCGACCATTTTTAAAGTTAGGTACCAATAAAACCATCTGATGG
CATTGATTTATTTTTATTTTGCTATTTTTTCATATTAGTCTCCTTTGAGC
TGTCTTTATTTTGGATTTATCAAATAGAGTGAACCATATCAGCTAAATAA
CTGTCCTAAAATTGGTATTGCAGAAAATTGAAGCTGGATGAAAATGTTGC
AGATGTATGGCCAGAATTCCGATCAAACGGAAAAGATGGAATAAAGGTTT
GGCATTTTTTACACAACTAATATAACTTTTTCATTTGCTATGTGATTTTC
CCTATGTCAGGAGATTTTTGTACAGAGTACTGCATTTATGAGAGCATGGA
TTCCTCTTTTATCATCGTTGACTGTTTACCAAACTATAATTCCAGGACTA
AATTCATTTACCTCTCTATATTCCATAACCCCTTTTTTGTCTTGTGTATT
TAGTTTCCATCACTTTTCAGTTCATTAAAGTGAACTGAGGTGCAGTATAA
TTTGGTTTATGGACTTTAAGTATTCGGTATGGTAAAATGAGAACAAATGG
GACATTGGCTGTGGATTATAGTCCGGGGTAAGAAATGTAGCCTGGTTGCT
AAAAAAGGACTTGTGCACTATCTTACCCGCACTTAGGTACGGTTGTTAGA
CACGGGTGCAGAAAATCTGAACTTTAGAAGGGCTTATAAAATTCTGGGTT
TCATGGGAATTTCTTAAAATCCAGGCTACAATTTGAATCTTTTTAGATGC
TGAGGGGTCAAATTTCAATGAAAAATATATGCCCATTTAAGATTCTGAGA
GAAGACTGGACCTTATATAAAAACCCGAGTGCAAATGATGGATTTTCCAG
GGTTATAATCCTTGCAGATGTACGTAGCCTTAATAATTTGATAATTCTGT
ATACCTTGATGGTAAGGTTATTGCTGTTTTTGGCTCTAACAGGAGTTAAA
TTATTAACTGACAGCGACCTCTGTCTTTTGTTTGAAATATCATTTACGTG
ACGTTATTGCCTTCTTTTTTCTGTTTCTGTAGGTGCACCATGTCCTCAAC
CATACATCTGGTCTGCACAATGCTCTCTCTGATCTTAGTCGGGAAGATCC
CTTATTACTGTGCAACTGGGATGAGTGCCTGAATCGCATTGCAGAGGCTG
TCCCTGAGGGCTCACCTGGACAACAGCAGCTATATCATTATCTCTCTTTT
GGTTGGTTATGTGGGGGAGTTGTTGAGGTATTGTTAATTGATGATTCTCA
CTGACTGGATGGTTAAATTTGCCTCTCTTTTCAGTTATATACTTATATTT
AATTAAATTTGATAAAGGATATATGGTCTTCAGTATATATAGTTAGAGCC
ACAGGTGAGTTCATATTTCTTAAAGATCTGCTGATTGGAAAATGATATAC
TGCCAGAAAACTAATTTACATTGACTAGGATGCCTGTATGTTTGAAGCTA
TGCAGTAGTAAGGTCTGGTTATATGTCTCCCAAGAGGCATGGGCATGGTT
AAAAGTTTTTTATATCTGTATACAGTGTTAAGACATATCTGAGCGGAAAG
TCTGATGAAGGGTTAAATATCAAAGTGGTTAATGAAGTGGAGGTCATATA
TCACTTTTCTCACCAATGTTAATGGGTATCATTTTGATCACTAAAGTCAT
AATAAATATCAAACAGGTACCTCTAAGTATGTGTTCGAGGAGTAAAAATG
ATATTTATTGAGTTCTACACATTTTTCTTAAATGTTATCACAAACAAGTG
AAAAGTTGTGAATTCTCAAATTTTGCTTTCCTTACCTCTGGCTGGGCGGT
TATAGTCTGTTTTGCAATTTATCAGTTTTATCCCGCATTTAACATTTATG
TAGGTGATATTACCTTCACTCTTTATTGGAAGATCATAAAAACCTGAAAA
TATTTTTTGGTTATTTGTGATTTGATTGTGCAGCATGCATCCGGAAGAAA
GTTTCAGGAGATTCTGGAAGAAGCTTTTGTTCGGCCTCTTGGCATTGAAG
GCGAGCTATATGTTGGAATTCCTCCAGGCATGATGATTTTAACCTGTTAA
AGTCCCCTACTATATCTTTTTAAATTCTGTACGCTGTCTGACTTAAATCC
TAGGAGAAACCGGATTATACCGCGGCCTGGTTATGTTTTTTGTCAAACAA
GATAATGTTGGATACTATATAGGTTGTGTATTATCTTCGGTCTTCGGATT
CATTACACTCGTTAATCCTTTGCAGGTCTGGAAACTCGACTTGCGACACT
TACAGTAGATACTGAGGATCTCAGCAAACTCTCTGGAATCGCTAGCCGTA
ACGACCTTCCTTCAAGCTTTCAGCCAGGCGATATTCTTCAGATGCTTACT
ACCCTTCCAGCCACATTCAATACACTTAATGTTCGCCGTGCCATCTTACC
TGCTGCTAATGGACACTGCTCTGCCCGTGCACTTGCTCGTTACTATGCAG
CTCTTGCTGATGGTGGTGTCATCCCTCCACCACATTCCACTTCTTCCAAG
CCACTGCTTGGCAGCCACCCCCATATTCCAAAATTCAGTGCCAAGAAAAT
TGATAAGAAGTCTAAAGGTCGCAAGAGCAAGGGAGCCTATGAAGCCTTGA
GCACATCTGATAAGTCTGAACCGGTCACGACTGATGAACATACCATTAAT
CTTAATGGTAGAGATGAAAGCCACATATCCATTGATTCTGTACCTACTGC
TGGCAGTAGTCGCAGCAGTAACAATAATAATATTACTAACACCAGTGCCA
CTGACCATCATGAATATGGTTCCAAGATATTTAATGATGAATCAATTCAT
GATGCATTCTTAGGTGCTGGACAATACGAAAACATGATATTTCCAAACGG
AAGTTTTGGACTTGGATTCAAGAGAATCAAGTCGAAGGATGGCTTCCTTA
TCGGCTTTGGGCACTCGGGCATGGGAGGATCAACCGGCTTCTGCGACATG
AACAACAGATTTGCTGTCTCGGTTACAGTAAACAAGATGTCATTTGGGAG
TGTTACTGCTGCTATCATCAAGTTTATTTGTTCAGAACTAAACCTTCCAG
TTCCTGTAGAATATTCTGGATCAGGAGGACCTGATATCTCAGCAAGTTTG
GAGAAGCCGATTATAAATTAA

Sequence Length:

8421

Sequence Checksum:

55084f0561d920df71859cf19aa5c8c4

View location in JBrowse:

DCARv2_Chr1:49161678..49170098+

Cds:

>DCAR_004550cds ATGGCCTGGGGAAACATATATACTCGGCGCGTGAAAGTTTTCACGTTGGC TCTTGTAATGTACTTGGACTATAAGGCTTTGCAAAAGAGAGAGAAATGGG TGAGTAAATCTAAACGAGATGCCTTGTGGGAAAAGCTTCATGAGCGCAAT GCAAAGCGAGTCCTGAAGGTTATAATTGAATTGGAAGGAATGTGGGTGAA ACTTGGACAGTACATGTCCACACGTGCCGATGTCCTCCCGGATGCATATA TACGCGTGCTTACGCAGTTGCAAGATTCTCTTCCCCCTCGCCCTTTAAAA GTGGTTTGTGAGACCATACAGAAAGAATTGGGAAAATCAATGGGGGATCT GTTTCTAAATTTTGTTCAAGTTCCTCTGGCAACCGCATCAATAGCCCAAG TTCATCGTGCGACCCTAACTGATGGACGGGAAGTGGTTGTTAAAGTTCAG CATGAAGGCATCAAGGCAATTATCTTGGAGGACCTGAAGAATGCAAAATC CATTGTTGACTGGATTGCGTGGGCAGAGCCGCAGTATGACTTTAACCCAG TTATCGATGAATGGTGCAAAGAAGCACCTAAAGAACTGGATTTTAATCGT GAAGCTGAGAATACGAGTTTAATATCCAGAAACCTTGGTTGCAATGATCA ACATGATGAGAAAGTGCCTGCTAATCACGTGGATGTCTTAATTCCCGAAG TTATTCAGTCAACTGAAAGGGTCCTCATCCTCGAGTATATGGATGGGGTT CGTTTAAATGACTTGGTATCACTTGAAAATTTGGGTGTTGATAAGCAAAA ACTTGTTGAAGAAATTACGCGTGCATATGCGCACCAAATTTATGTGGGTG GTATATTCAATGGTGATCCTCATCCAGGGAATTTTCTTGTCAGCAAAGAG CCTCCACATCGTCCAATTTTGCTTGATTTTGGTCTTACTAAAGTTTTGAC GAGTTCTATGAAACAAGGTTTAGCAAAAATGTTTCTGTCATCTGTTGAGG GTGATCATGTGGCACTTCTGTCTGCTCTTGCGGAAATGGGATTTAGATTT CGAATGGACTTGCCAGATGAGGCAATGGATCTAACAGCTTTAATATTCCG TAATTCAGCACCTACCAGAGAAGAAGATGAACACTTGAAATCTTACAAGG AGAAAGCAAAACTTAAGAAGGAAAGCTTGAAGCTCAGTCAGAAAGAATCT CGTCGCTTTAATCCTGTTGATGCTTTTCCGGGTGATATTGTGATCTTCAG TCGGGTTCTCAATCTACTAAGAGGGCTTTCATCTATAATGAAGGTTCGCA TAAATTATGTGGATATCATGAGGCCGTTTGCTGAATCTGTTTTACAATGC AATATTGATAATGGCCCGAGATTAAATGCGCAATGGATATACAACACTCC TGTTCATTCTGATGTGGAGGCAAAATTGAGGAATTTATTAGTTGAGCTGG GGAATGCTAATAAAATTCTTGGAATACAGGTATGTGCCTACAAAGATGGG CGAGTGATTATTGACACTGCTGCTGGTGTGCTCGGAAGATATGATCCTCG TCCTGTTCAACCTGATACCCTATTTAATGTGTTCTCTGCAACAAAGGGTA TCACAGCCGGAATGGTACATTGGCTTGTTGATAATAGAAAATTGAAGCTG GATGAAAATGTTGCAGATGTATGGCCAGAATTCCGATCAAACGGAAAAGA TGGAATAAAGGTGCACCATGTCCTCAACCATACATCTGGTCTGCACAATG CTCTCTCTGATCTTAGTCGGGAAGATCCCTTATTACTGTGCAACTGGGAT GAGTGCCTGAATCGCATTGCAGAGGCTGTCCCTGAGGGCTCACCTGGACA ACAGCAGCTATATCATTATCTCTCTTTTGGTTGGTTATGTGGGGGAGTTG TTGAGCATGCATCCGGAAGAAAGTTTCAGGAGATTCTGGAAGAAGCTTTT GTTCGGCCTCTTGGCATTGAAGGCGAGCTATATGTTGGAATTCCTCCAGG CATGATGATTTTAACCTGTCTGGAAACTCGACTTGCGACACTTACAGTAG ATACTGAGGATCTCAGCAAACTCTCTGGAATCGCTAGCCGTAACGACCTT CCTTCAAGCTTTCAGCCAGGCGATATTCTTCAGATGCTTACTACCCTTCC AGCCACATTCAATACACTTAATGTTCGCCGTGCCATCTTACCTGCTGCTA ATGGACACTGCTCTGCCCGTGCACTTGCTCGTTACTATGCAGCTCTTGCT GATGGTGGTGTCATCCCTCCACCACATTCCACTTCTTCCAAGCCACTGCT TGGCAGCCACCCCCATATTCCAAAATTCAGTGCCAAGAAAATTGATAAGA AGTCTAAAGGTCGCAAGAGCAAGGGAGCCTATGAAGCCTTGAGCACATCT GATAAGTCTGAACCGGTCACGACTGATGAACATACCATTAATCTTAATGG TAGAGATGAAAGCCACATATCCATTGATTCTGTACCTACTGCTGGCAGTA GTCGCAGCAGTAACAATAATAATATTACTAACACCAGTGCCACTGACCAT CATGAATATGGTTCCAAGATATTTAATGATGAATCAATTCATGATGCATT CTTAGGTGCTGGACAATACGAAAACATGATATTTCCAAACGGAAGTTTTG GACTTGGATTCAAGAGAATCAAGTCGAAGGATGGCTTCCTTATCGGCTTT GGGCACTCGGGCATGGGAGGATCAACCGGCTTCTGCGACATGAACAACAG ATTTGCTGTCTCGGTTACAGTAAACAAGATGTCATTTGGGAGTGTTACTG CTGCTATCATCAAGTTTATTTGTTCAGAACTAAACCTTCCAGTTCCTGTA GAATATTCTGGATCAGGAGGACCTGATATCTCAGCAAGTTTGGAGAAGCC GATTATAAATTAA

Pep:

>DCAR_004550pep MAWGNIYTRRVKVFTLALVMYLDYKALQKREKWVSKSKRDALWEKLHERN AKRVLKVIIELEGMWVKLGQYMSTRADVLPDAYIRVLTQLQDSLPPRPLK VVCETIQKELGKSMGDLFLNFVQVPLATASIAQVHRATLTDGREVVVKVQ HEGIKAIILEDLKNAKSIVDWIAWAEPQYDFNPVIDEWCKEAPKELDFNR EAENTSLISRNLGCNDQHDEKVPANHVDVLIPEVIQSTERVLILEYMDGV RLNDLVSLENLGVDKQKLVEEITRAYAHQIYVGGIFNGDPHPGNFLVSKE PPHRPILLDFGLTKVLTSSMKQGLAKMFLSSVEGDHVALLSALAEMGFRF RMDLPDEAMDLTALIFRNSAPTREEDEHLKSYKEKAKLKKESLKLSQKES RRFNPVDAFPGDIVIFSRVLNLLRGLSSIMKVRINYVDIMRPFAESVLQC NIDNGPRLNAQWIYNTPVHSDVEAKLRNLLVELGNANKILGIQVCAYKDG RVIIDTAAGVLGRYDPRPVQPDTLFNVFSATKGITAGMVHWLVDNRKLKL DENVADVWPEFRSNGKDGIKVHHVLNHTSGLHNALSDLSREDPLLLCNWD ECLNRIAEAVPEGSPGQQQLYHYLSFGWLCGGVVEHASGRKFQEILEEAF VRPLGIEGELYVGIPPGMMILTCLETRLATLTVDTEDLSKLSGIASRNDL PSSFQPGDILQMLTTLPATFNTLNVRRAILPAANGHCSARALARYYAALA DGGVIPPPHSTSSKPLLGSHPHIPKFSAKKIDKKSKGRKSKGAYEALSTS DKSEPVTTDEHTINLNGRDESHISIDSVPTAGSSRSSNNNNITNTSATDH HEYGSKIFNDESIHDAFLGAGQYENMIFPNGSFGLGFKRIKSKDGFLIGF GHSGMGGSTGFCDMNNRFAVSVTVNKMSFGSVTAAIIKFICSELNLPVPV EYSGSGGPDISASLEKPIIN*