Resource Type:
Gene
Organism:
Name:
LOC108204395
Identifier:
LOC108204395
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017373799.1, is a part of gene, LOC108204395. |
| The genetic_marker, MK004555 K1999, is located in gene, LOC108204395. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017373799.1 | XM_017373799.1 | mRNA | DCARv2_Chr1:29591789..29609039 |
Sequence:
AGCAAGAATTGTGATGGGACTTGTGTGCAAAATTTAGCTGCAACTATATA
ACCGCAAAATCCAGTAACACTGGCTCCTATTTATCCACAACTCTCGTTTC
TGTATAAAATGGAGCGAGTAAGCTAACTGCTTGTATCTATCATTTGTATC
TATATATATCTTTCCGTTAATTTGAGAATTCAATCATGGCTTCTCAGATG
TCCTCGTACAAGGTACGCTCTCTTGATGCTTCAAGCTTTACAGAACCTTC
AAATTCATGTGTATTGTAAAGTGTTTGTGTATGTTACATTATTTTTGTTG
CTAATTGAGTTGGTTACCAGTCGTGTTTTTAGTTTTATTGCTGTTAGGAG
GTGTTGTGTTTTGTTGCGTAACATGTGTTTGATGAAATGCCAAAAAGAGG
TAAGTTCATTCTTGGTAACGGGATGTTTACTGGTTTCCGACAAGCGAGTG
AGTGCAGAAGATGCACGGGAGGGAGCGGGGAAACTACTACCTGATCGTAT
TTTATGAATTAGTTTCATATTTTGATATTAGGACCGCACTAGCACCGGCT
TTACCTGGATGAACCTAATACGGATACCATTACTACTCAATTGAGAAACT
TGCCAAAATGTAGTTTTGATGCATCTCCATTTGAAACTATTATTCAAGCA
AGGCAATGCAACATCTCGTGAAGGTTTATCCTGAGTATAAATAATATGCC
TGGAAGCAAATGACAGCTATGAGCAGGGGCAGAGCCACTCACATGCGAGG
TGTGCGGTGGCTAACCTGAGGCCTTGCCTTTAAAAAATACTACTACTACT
ACAATGACTACGACTACTACTAAGACTACTGTACTACACATATCCGAGTG
TCAGACTCGAAAAAATTTTAAAATTGGGGACACGGGTACGACACATCACG
GGGGCAATGTCCTATTTTTTGGACACGGGTACGAGGACACATCATAATAC
ATTAATAAACAGGCATTGTAAGTAGATACCTTAACCAAGAGTAACTATCA
AATCATGATCAAACACAATTTTTTTAAAGAATATTTTAAATTAGGGTCCT
ATTTTTTGGACACGGGTACGAGAACACATCATAATACATTAATAAACATG
CATTGCAAGTAGATACCTTAACCAAAAGTAACTATCAAATTATGATCAAA
CACAATTTTTAAGGAATATTTCAAATTAGGGATATTCTATGCCTGTTTTT
ATTTTTGCTTTTATTTTTCTAGTTTGCATTGTATATTCAACTTAAATGTG
GTCTTTTAGTTGGCAAAGTGTCCACATGTCAGTCAAAGGATCCGACACAA
AACAAGTGTCATGTCCGAGTGTTTAAGTGTCGGTCAGGGGTACGATTACC
TAAGCAGAATAGTCGGAGTAACATAGGTTTTGGAAAATATGTTATCTTAA
ACTTAGATAGTGAACACTTACCACGACGACAATCAAGAACAATCTGCATT
ATGAAATTGCTGCACAACAGTAGGCAGAAAGTGGGAGTGAACATTAAGTG
TATCTGAGTTAGATCCTACTTATTAGCCGGACACTTCACCTTGTAGCATC
CCAATCCAAAATAAAAGTTAAGGTCCCGTTACAACTTGTGATTGAAGTAA
CGACTTGTTAACGAAGAGCAAGGTCCATGTATGACTCGTATCTATGTTCT
ATTGATTTCATGCTACAAACAAACATAAGTTAGTGTATGTGATTTATGTG
TAACTTCAGACACTATATTTATGAATGTACCATAAATCTGTCTATATAAG
ATTTACTTGCGTTAAGCTTACATACTGAGTTCCCGCATCCATGTCTATTT
GGGGTCTTGGGACTCATATCCAAGAATCCTAATCATCCTAAAACTAAGAA
TCTAACTCTTGGATCCGCACCCGTGTCCGACATCCATACCCAAGTCTAGG
TAACATAGATTCATAGAGAACATGTTACAATTTTCCTTTTGAATTCTTAA
TTTAATCAAGGAAAACAGTATTGCTGTATCTGCTACGTATTTAAATCGAC
TTCCTAGGATTGGCTCAGATAGATTTGATTCAATGTCACTTTTTGCCCTT
TTGAATCTCTAGTTGCAATTATCTGTAATCATTAAATACTGGATTGAAGA
TCTTTATCTTTCAAGGCATTTAACTTCTCATTACATTCTGCTTGTGAATG
GAGGCAGTGGGTTTTGGTATTGATGATGTACAAACCAGCAAATATATACA
TAAGTTCCAGCTATAAGGACACAACGTTTATTCTCTTCTATTAAAAAGAT
AATACTTTAATTTCTGGTTGTCTGATGGATTTCCAAAACTACGGTAGTTT
TCTATTTAGATTGGAACATCTAGAATACTGTTTATTTAAACCGATATCAA
TTATGTATCTTTTTTAATTTCTGTTACCATGAGTATCACCTTCATTTTCT
CATCTCCTATTCATGTTTTTGTTTGTTCTAGGTTATGTCAATGAGAAGTT
TCTCTTCTTTCCGGAACGAAACTTCGGTTTTTATAATTAACTCCCGCAGA
AGCTCTTCAGCAAATTTTTTAGCTTTCCTAAATATGACATATTATTCAAC
GAATTCTGGCAATGACTATCATCCTTCATCAAAGAGGAGATCTCGTGGAC
CTGTAATGGCAGCCAAAAAGGCATCCAAAGGTCTGTTAATTTATTATACT
GAACTGAAAAAAATGAACTCAGCTTTTAACTATATCCAACCACTTAGTTA
ATTCAAAAGAATTTTTGGGACTACCTCTATGAAAGAGGCATCTCCTTTAT
AATGTGCCTACTTTTGCGCAGGGGAAAAGCTGGAAGATGGAAAGTACAAG
CACACAGTTGACCTGCCTAAGACAAAGTTTGGCATGAGGGCCAACTCTAC
AACGAGGGAGCCTGAAATTCAAAAATTATGGGAAGAGAATCAGGTGTTTA
AAAGACTTTCTGACAGGAATAATGGGGTGAGTTCAGTGTTTGGTATAACA
TCTTTTTGCACTGTAGCTCTATTTAAACTTGGCTAAGATATTAATATTTC
ACAGGGGAGTTTTGTACTTCATGATGGTCCTCCTTATGCCAATGGTGATT
TGCACATGGGTCATGCCTTAAATAAGATTTTAAAGGATATGATTAATCGT
TATAAGGTACGTATCTCCCCCTTAACATGTATTACACATACGTATCTTTC
AAGTAAATGTACATGCTCACCTCAGAAAGGTCTAATTTTATAGATAAAGT
GCCACATCATATCTTGTTAAATAATCTAAGTGTGCGCAGATGCACCATAG
ACATAGTCTTTGACTTTGTACTTGAACTAGATTAGTCCCCGGTAGATGCC
CGATTATATTATAACTATATTTTATTTGAATTCAAATAAATATTATTTTT
TAAAATATATATGTGATATATGTTAATTTTAATTAATATTATAATTTATG
AAAAAAGATAATTAATTTGACTTTGGTGTCAAAACTAATTAAGTGATATA
AAAAATAGAAAGTATTGTATATATTTTAAAAATACATAACTAATGCTTAT
TAAAAATATGAAATTAATTAATATGTGCAAATAATATTGAGAATATTAGG
AGAATGAGCAATATGGAGAAAGAATTAGTGGAGCATGAGAATTGAAGATG
AGAGAGAATTAGTGGAGGATGAGAGAGAATTAGTGAAGTAAGACAGAATT
ATATAATCATTAAAAGTAGAGATTAACGAGGAATTGACGCATAAAATGCT
GATGTCATCCATTTAATTGGAGGTTGACACATAAGCTTTGATAACATCAG
CCGTCTTTTGTTTAGTATAGAGAAAGATGTATGAGACTTACTAGATTCAA
TCTACTGATATGATTATGTTTCTTCTATAATCTATAGGTGATCTAATAAA
ACCTAGAGCCTTTTGCAATACCAAACTTCATGTCAACCTATCCTACGGAC
AATCATGAGGCGTAATATCTGAATTTACCATTACTTTCTTCTTCCTTACC
TTTATGTAATCTTGAACTTGACTTGCAAAAAATAATTTTAGTATTTTACC
CTCACCAGTTTTTGACAACTTATAAGTTACATTTTTTTTTTAAAGTTTAA
ATAGTAAAAACATGAGGTTTATGCGTGCATGTCACCTTTTGATTACTAAT
AGAAATGTTACTACCCTTTCTAGTTTATTTGTAATATTAAAAAGTACTCA
CATATAATGCACGAGCTTCTTAACTTGGTTCCAGTTACCCCTTAGTATTA
TTTAGACGCAGTCAATCCTATGAGAGACCCAACCTTCCAATGTCTTGTTT
GTGTTACAGCTTCTTCAGAACTTTAAGGTTCATTATGTGCCTGGTTGGGA
TTGCCACGGACTACCAATCGAATTAAAAGGTAAATATCAGTTCTCCAGGT
AATCTGGTCGTGTTTATTATGTAGTCCTTTATATTGCTTGTTACAATTAG
CAGGAGTCAGTTGAACTAGACCATGAAGAGCTTTGAATCAATATCAGCGA
AATATGCTCATCTGGGCATGTAAGCTTTGTGAGTTTGAGGTCTGAATAGT
TTAAGATTATAATTTATCTATGCGAAACTGTATTCTTAGGTGCTGTTAAT
TGAACTTGACATACTAAGATATACTAGGATTTCATGACATTACATGTCAC
TCTGAAGTATAAGACATCATTTTTTTTGGCAATATTTTCTGCATGACATT
ACATGTTGCTCTGAAGTTTAAGTTGTCATCTTTCTTTTGGCAATATTTTC
TGGTAACTGAACAGCAGCTTAGTAAATGCTTATCTTTGCATGAAATCATT
TATAGGTGTGGCTGTAACTCTTTTCATCCCATGGTAGTGGCACGCTTGCA
AGACTTTTGATTTATTTTAAATATTTAATTATGCTAGGAAGAGGTTGTAA
AATTGAAGTAAAATAGTGTTTACATGCATTAAATCACATTACAGATTGGT
GTTAACCCAGCTACAAAAAAATAGAGAACATAGGGTGAGAAGAAACTATA
TGTTCTACAGAATGCACTACCCCTCATTTTCTAAAACCCAACTCATTTCA
CTTACCAGGCAAAAAAGAAAGTGATGTATCACATTTTTTTTATGGAAAAT
CTTCCAGAAGGATTAATAGGCATCCTCTGATCATTGATGAACCTATTTCA
ACCATGAAAGGACGGTAATCCACCAACTCGAGTCATATTTTACAGCATTG
GACGACTGCAAATTATCCATTCTTTATAGGAATTGATGCATAATTATGAT
CTATCCTTCGCATGCTTGGTGCTGGAAACTCTTTATATGCTTGTGGCGTA
TGTTAAGATCTGATTTAATCAGCAAATAAATTAAAAGCACTTCCCCTCCA
TTACTTTTCGAAACAAAAGAATCAGCCACACCTATAGTGCAAAAGGCTAA
TACTTAAATAGTTATGTTAGCCAAATTAGCCATACTGGCTGCACCACTAA
ATTACGTGACTGTTAATTGAAAAGAAGCTTCATTTATAAGATGGAGTATA
GAAAAGAATAGTCATCAGCACAAAACAACCATGCTCTCTGGATATCTATA
TTTTCCACAATTTCCATACTTTAGAGAAGCTATTGAACAATGTTGTTGGT
CTGCACTATGACATTACTGAATTATTGGGGCAATTCCCCCTGCCTTCAAC
TATACTAGTGCTGCAGTCACTGGACCAAGAAGCTAGAAAGGCACTGACAC
CATTGAAGTTGAGAGCGAAGGCCGCTAAGTTTGCTAAAACAACTGTGAAG
GCACAGATGTCATCATTTAAGGTTACCCCTAATACGCATCTTACCAATTC
AATTAATTTTATATTGTTCTGAGACATCTATTGAAAATTTTACACCCCCC
ACAAGATATAGACTAACTTTGCCATGAATTTATCATCCAAGGGGTATGTG
TGTGTGTGTGTGTGTTGTGTGTATATATATTTATATATATATATATATAT
ATGTGTGTGTGTAAGTGTTAAATATTTTGATGTGCCAATAATTAGCGATC
ACATTTCAGACACACTTATTTAGAAAATGCAACTAAATGTTAAGTGGTTT
CTTTTAGAGATATATCTAGATGTAAGGTGTTAATGCCGACTATTTGCAGA
GATATGGAGTATGGGCAGACTGGGATCATCCTTACCTAACACTTGACCCA
GAATATGAAGCTGCTCAGGTAGTATATCCTATTTTACAGAGTTCGTCTTT
CATGTTTAAGGAATATAGTCAATATAGGTCATAAAATGACTAATATAAGC
CATATATTTATAGGCTTCTGTTACTTTTTTCTTTCTTTATTTCAATTAAC
GTATTTCAGTTCCTTCTGCCATTTTTTTTATTCAGTAACATGTCTCAGAA
ACACTGATCTGTCTACTTGCACGTGACATCTTGTATCACTTCTTATTAGG
AAGTTATCTACATCATCCTCGTGTTTAATTAATCTTAATTTGCTGATTTT
TTATATTTGTATTGCATTGACTAGATTGAAGTCTTTGGCGAGATGGTCTT
TCAAGGGTATATATTTAGAGGCAGAAAGCCAGTCCACTGGAGTCCTTCTT
CAAGAACTGCTCTTGCAGAGGCCGAGTTGGAGGTATATTAAATATCTTAT
ATGCCATTACAGGGAATTTTTGGCAGATCATCTCAAATTCAGGATTTTCC
AAATGACGAACTTTACTGTCTAACTCTATGTCTATGTTAAATCAAAAGAT
AAGATTTAATAATTCTAGTAATCATCAGTTTGTTTATCGAAGTCAGATGA
AAACATTTATCTGACAATGAGGTGTAAAGTTTTGAGTCTGCTATAGTGCT
ATGTTATTGCAGAATCTTCAAGGGGTAGCTGGATTTCATCTAGGCTAAAT
TCTTTTCTAGCTTTGGTCTGCTTGAACTCTCTTAAAAATAAGTTTAACAG
GAGGACCTTGAATGTAATAAGCTTGAATATAAAAGAAATAAGTTTCAAAT
CTAATATCCTATGACATGTTGTGTATTTCATTCATTTAAAGAGACACGAG
TTGGCACTGGGGAGTAAATTCCTAGTATCCCTACATTGATATGACCCCGA
ATTTGTAGTTTCTTTCAGTATTTTAATCCATTAAATAGAATAATTATGAG
TAACAAACAAATAGACTTTTTCTGTTCAATAGCTCATGACATGATGTGTA
TAACATTTATTTAAATAGATATAAGTTGTATGAGGAGAGTAATATTCTAG
TATTCCGTTGTATATGTTTCTATTCCCTTCCTTGATATGACACCGAGTTC
ATATATTCATTCAGAGTTTACATAAATGAAACTTTTTGCTTTCATATCGG
AGGTTGGGTTTTGGGGTGCTGAAGTGAAATCACTCTTCAAAAGATCTTTA
TATAGCTTATCTTGGTAACTGCATCGTACTTATGTTCCAGTGATCTCTGC
AGAAACTCATCTGTTGGTTCTATACACATCATGAGAATCACTGTTGATTA
CTTTGGCTGAAGGTAGTAATTAGTTGATCCCGGGAAATAATAAGGATGCA
TTTCATGGTGTCATTTTTTTTTGTTCTTACAGAAAGCAATTAATGAGCCC
GTGAAAAGAAAAAAGGATCCTGTGGGTTTGGTTTTGCTGTTTATCTCCAT
TCTATTTTTTTTTTTGTCTTGGAGGGGGAGATTTTTCATAATGAAGGGGA
AGATGAGCACTTCTTTTTGTCTTACAATGTAAAAATAAAATAGACCAAGA
ACCTTCACACATGTCATCCCTTAGCGCCTTACTTCTCTCGGACTGCTGGC
CTCTATTATCTTATTTGTTCCACCTCCACTTCAATGTTACTATACGTCTA
TATCACCTCAAGGATTCATTGTAATCCTTTTCTCTCTTGTTTTCTTTTCT
TACTTGCTTTGTAATTCAAACTGCAGTATCCCGAGGGACACATTTCAAAG
AGCATGTATTCGAATTTTAAAGTACTCAGTGCTCCAAATTCAGGCAGATT
GCTCGAACTTTTTCCCAATTTGTTTTTGGCTATTTGGACCACAACACCCT
GGACTATCCCGGCCAATGCTGGTAAGAACTAAATTATGTATAATTGCAGA
AATGTTGTGGTAAATTAAAAAAATTCCAGTTACCCTAGTGCAATGTAGTT
GGCTGTAAGTATGTAACCCAATCTCCACCCTTAGACTCTGATCCTATCTT
TTTCTAAACAATATTCTCTGTTCGCAATAGAGATTTTAGAAAATGATCAG
TACATATTTTGCTATTGCTTCTGGTAGTTTCATGACAAAGCTGCTAAAGT
TTGACGGTCATTTATAAAGAAACATAATTACTGGAAGATATATGAAACAT
GTAAAACTGGAGACACACTTAATAATGAAAAGAGATTAGGAAGATGCTTA
AGAAGGTACTGTTGGTGTATTGATGCTAGTCATATCTGGTAGTGAGTTAT
GACTGTTTATTGAGCTAAATCTTTATTGTGGGTGTGGTATAAGTTGTGGA
GTGACCTTTAAGCAATAACCCTATCAATTTTTGGGCAGGATGGGGTAAAA
TATAATCGTATCTTGGTTAATGTTTTTTTAGATTTCGTCCTGCATCCGAG
GCCTATGTTTTACGGTCTTGTGCAATGTATATTATTGGAAGTCAAAGTTA
TTACTATTAAGATTTAACCCAAACAAATTAAGCATGAGGTTTTCTACTTT
ATTCTTATTCCATCTCCTATCCCAGCACATGTTCATGAGTGTAGGCACAA
TCATATTTCATTGTACTTGTGCCTCTTCTGCAATTTTACAGCATCACATG
ACAGGACAAATTCTATAAATAGATCTCTCTTGATCCCACATGGTTGATGG
TTTTGTAGCATAATATTGGTGTTTTGCTATGTTGGCTCAGTCTTATTTCC
TGAAACTTTTTCGCTGCCTAATTGATGTTTCTTAAGTAGACTTGAACCTT
TTTTTTTAATGAAATTCCTCTGATAAATGATAAACCAAGCAGTTGGAACC
ACACCTATGTTCTACATGACCAAAACTCCTACTGTCCTAGTCCCCCCCCT
CATCCCCTATAGGAAAGATGGCAATCTCAAATTTTAACAGTTTGGTTGAC
AAGTCTCTAGATTTAACATGCAATGGAAGTGGTTGTATAATTATGCCATG
CTTGGAAATAAGGAAAATTAACTAGGATTCTGAATGTGCTGGTTATTATC
TCTGTAGCATTCTTCAAAGTAACATGTAACTGTTGTACATGTACAAAGTC
TTTCGGATTTGCTTGCGCAGTACAACACATTGTTTTACTATTTTTCATTC
TGTTCCACAGCTGTCGCAGTCAATGCTAAACTAAAATATGCTGTTGTCGA
AATGCATAGACCCTTGGCAGATGTTTCTACATCTTCTGCAGACGGAAAGA
AGAGGGTTGGGAATTTCTTAAAAGAGCAGGAGAACTCCTTTCTTATAGTA
GCAGAGGACCTTGTGTCAACACTGGAAGCAAAATGGGGAGTGGAACTTGT
TATCAAAAAACTATTATTGGGATCAGATCTTGAAAATTGCAGGTTATGTG
AAAGATATAACTTTTACTTTCGTGACGTGCTCCGTAAATGTCACATTTTT
TGACTTGGATACAATACTCATGTGTTTCAATTATATGTGACAAAGCGTCA
AAGATATTAATGTGATCTCTTTGAACCTTGCTCTTTGGCTGCTTCAGGTA
TCATCACCCAATAGAAAACAGAGAATGCCCTGTTGTCATTGGTGGAGATT
ACATTACAACCGAGTCAGGAACTGGGCTTGTCCACACAGCCCCTGGTCAT
GGACAGGAAGATTACGTGACAGGATTAAAATACGGTCTTCCTGTTATTTC
TCCTGTAGATGATGATGGAAAGTTTACGGAAGAAGCAGGGAATTTTATTG
GTTTAGATGTACTTGGGGATGGTAATGCCGCTGTTATTGAATACCTTGAT
AAACAGTCATCGATTATCATGGTAGAGCCATATAGTAAGTTGTGATCTCA
TTTCGCAGTTATATTGATTATGCTATGGAACATGGAAAAGTATTAAATTC
AGTGCCAGGACTAATTTCTATTTTCCAATGCAGGGCACAAATATCCATAT
GATTGGCGAACTAAAAAGCCTACTATATTTAGGGCGACTGAACAGTGGTT
TGCTTCTGTAGAAGGATTCAGAAAAGCTGCCATGGATGCAATAAGCCAAG
TAAAATGGACTCCATCTCAGGTATCAGTGCGGCTAGTGTGTAATTATACA
TTTTTCCTATCAGCCCTTCCATAGTCATAATCTTGGTAATCTAAACTGCA
AGTCATTCTGCTAAAATAGAGGTAAATATTATATGAACTTCGTTCCATTT
GATATATTTAATCTTGTTGTTCCATTATCGTTTTTCTTTTAAACAAGGAG
CTGTATACTGGTCTTAAGAAAAGGAGAACTTTATCTAAAACTTTTAGATA
GAATGTTATATTTTAATTTTTGTAAAAGCCTCTCCACAAGCAGGCAAGCA
TGCGACAAATGATCATCACGTCATGCTAATTCAATCCTGTTTCCCTTTTC
CCTCTTTGGTTACAATCCACAGATTATGGGTTCAATGTTTGACATAAATA
GTGCCATAGTTATGTTTCACCGTTCTGTAGATCCAATCCATATCCAGTTC
TTGACTTGATTGGAACTTAAAGTATAGTGACAATTTATTAAATGCAATTT
AAATTTTCCATATGAGCTAGGCTTTGCTCGGCTATATGTAATCTCCGATT
ATAAGAACTTTTAAAGTAACTGGAGAAATTAATATTATATTGGGAATGTC
AAGTTTGTTGTTACTTGTTCGGTCTGGGTAAGTACCAGAACAAATCAAGT
CTGGGGAATGTAGGATGTCAGGGAGGTTTTAATGAAGGAAGTTGTATTGA
ATTGATGATTGTTATGAACCTGACTCATTACCTGAAATTGCCACCTCTAG
TTTATGGTGCAAATTGTACTATTGTTATTGTCATATTAAATAGACTTAAC
TTCCATCTTCTGAGATAACTGAAATGAATTAGGTTTTGTAAATCTGTAAC
ATTGCTTGCTATTCTTTTTCCTCTACTTTCTAAAATTGGTTGACATATCA
ATCTTAATTGTACATCAAGGTTCGATAATACGTTTTTGCAGAATACCTCT
GTTTCTATGCAGCTAATTGCATTTGAACAAATATTTGTTTGATTTATAAG
CTGCGGAAGATATTGTACACTATTGTTGCTAGCTCTGTATTCTCAATGCC
TTCTAGGCTAAGTGCTTATCCGAGCTACTGTCTAGATCTCACACATGTGA
ATTGTGAAAATAGTTATAATGCAACCAGAAACCAATAGCAGACAAATTTT
AATAATTTTTAGCTTCATTATTGTCGTTCCAAGGTCCAACTCTAAAAAAA
GGAAACTCACAAGTGAGTTTGTATTGTATAATTTAGAGGTGATTGTCACT
GTATGGAATTTTATCCCTGAGCTGGTGTACGGATGTGTGATTAAGCAGTT
GCCCTCATCATTACAATCATTATCAGTATCCATACCTATCATATACCCCT
CATCTTACAATTGCGTTCCCACATTCTCCTGGTTGCATTTGTATTTGAGA
AAACTATGATCTTTTGCCAGGCGGAGAATAGAATATCTGCGATGGCTTCT
GGCCGCTCTGACTGGTGTATATCAAGGCAAAGGACATGGGGTGTTCCGAT
TCCAGTCTTCTATCATGTTGAAACAAAGGAACCGCTAATGAATGCAGAGA
CTATTAGTCACATTAAGTGTAAGGACATTTTAGTGCGCAAACAGTTGATA
ATTGTTGGTTTTATTTTGCTTGAGATTCTTAATGTTCAAGTAAATATGAG
TTTTGTTTTCATTAGCTTTTTTATTTTGACTATTTTATGTTCAATGCATT
TTTCTATGTTGAGAGAATATCCCCTCACTAAACGTCAGAGACTAGAAAAT
TCAAAGGTTCTATTGAAATATGGAAGCTCTATGCTTTTATGTATTTTGGC
AGCTATAATATCCCAAAAGGGCAGTGATGCATGGTGGTACATGTCAGTGG
AGGAACTGCTTCCTGATAAATACCGTGGTAATGCATCAGAGTATGAGAAA
GGGACCGATACAATGGATGTTTGGTTTGACTCAGGTAGTAAAGTTCTACA
GCTTGTTTTGGTGACCCACCAGTTATATTTATATCACACTAATAGTTCAT
CTATTCTGTCGTATAAAACCGCCGAATGTGTTCTAGCTCTCAGTCTCTCT
TAATAATGCTCCACAATAACTAATTTCTGCTATATACTGGGGTGTGTTCA
GGTTCTTCTTGGGCTGCTGTGTTAAATAAAAGAGAGGGACTAGGTTATCC
TGCAGATCTTTATCTCGAAGGTACTGATCAGCATCGTGGGTGGTTTCAGA
GCTCATTGTTGACAAGTGTTGCTACTAAAGGTAGATATATAATTCTATCA
TCCTGTGGTATATGATATATGTGTCTATTTCTGTTACAGTTCTATTACAT
TTGCAAGTAAGTTATTAAATTTTGAGTGATGTAGAACAAGATTAAGATAG
TGGTCTACGAGACTCGGGACATATAAATTAACAGCTTTCGAATATTCAAT
AATTTGTAAACTTTGAAATTTGATTTATAATGAGTAGTACAAAAGTTTTT
GTAAGAATCCTTTGACTTGGAAGCTAACTGATAACCAAATGAAAATAAAA
CTAATCCTTATCTGTATCTGATACCACATTTAATCAGAAGAAACCAACTC
CTTTTATGACTTTATTATCGTAGATCCAGAATTTTCCTAATAATCTCCCT
ACCCAATAGGCCAATATAATTAACACAGTAACCAAATATGGATAATTTTA
CATGCAAGGGATAATTCGTATACATTTAATGTTTACGAAAATAATTTATT
AGTTCCTTAGTTCGCATCATAGAGTGAGAGGTTGGTAATTACATGATGAC
GCAGAGAGAAAAATTCTTTTTATTGGCACCAACACCTATCCAATCAAGAA
AGCTCTAAAAAGGGTGAAGTAATAAAACAGTTAATTGATCCGATATATTC
CTTGCTTTCCTAGAATAAAAAGACTCATTTTGAGGTCATTTACTCGTGCC
ACTGGTCACTCTCAATCGAAAACTATCACACTTTCTTGCTGCCAGATCAT
GAACCAGACCAATGGGTATCATGCTTTATGAACACCAATTATACAGAGCT
AAAACTCTAAACAAGGCCTCGACACATGCTCGGCAAAGAAAACAACGTCA
TCCTTTCGCAAAAGCGGTGTCTAGCTAACTCCAACTCCTGCTAACACTAC
ATAACACTTGTTTCAATACGGTTACCCTCCACCACAACCATTAGTTTATG
AACATTTCTTGTGAGGCTGTCGGAGTATAGCATTTCATATTTGGTCTTCT
ACTGTCCGATGTGCAATGACTTTACGATTGTATATTTAATGAACCTTAAC
CAACAAATATTTATAACAAAAATATTAGCCGACAACGACCTGCCTGAAGT
ATATTCACCTTACTGCAGAAGATATCTTCAGCAGAAGCCATCTTTTTAGA
TGCCTTCTATCTGCATAATTATTTTACCTCCTCCATCTCCCGGCCTGAAA
ATGAAAATTGTGCTGAAATTTTAGTGCTAAGAGCACATGACATCTGGCCA
CCTCGAAGAAAAATGAAGAGGGTGTTGGGTATTCTTCTGGATAATCTCAT
TGTACTAATAATCTGAGATTGTCTGATGTTAATAATTTTAAAACAATTGT
TGAAGGATATATATATCTGACAATTAGCCGACTTAATTAAAAATGGGGTA
ATTAATAATATAAGTATCATAAAATATGTGCTGACTATATTTAAATTGTG
AGGTATTAAAATTAATAATATTATTATTTTGCAGGAAAGGCTCCCTATAA
TGGTGTTATCACCCATGGATTTGTATTGGATGAGAGAGGGTTGAAAATGA
GTAAATCTTTGGGAAATGTTGTCGACCCAATTACTGTGATTGAGGGAGGA
AAGAATTCGGGGGTCAGTCACAGATCTACTACGTTTTCAACGGTTTATAT
ATCAAGTCCATTATGTTTATGCTTCTTTTTTATGGCAGGAAGCACCTTCC
TATGGAGCTGATGTGCTGAGACTTTGGGTATCAAGTGTAGACTATACTGG
TGATGTGATGATTGGACCTCAAGTACTACGTCAGATGTCTGACATATATA
GAAAGCTGAGAGGAACTTTGCGCTTTCTTTTGGCGAATTTACATGATTGG
GAAGTATGTTCTAACTTTGTAAAAGAAATTGTTTGCGATGATCGACTAAT
GAAAGTCATTTTGATAACTTTGACTATTCTTTTTATAAAGCTTCATATTG
GAGGACCTATTTTATGGAATGTCTGAGGCCTCTTGGCTATTCTTTTTCTC
TGGTGCTAGATTCATACGTGCTAAAAAAATTAAATTCTTATCCCTCTAAT
CAACTATTTCCCAGATGCAAATATATTCTTATTGCAATAATTCTCTTAAC
TGATTTGTCTACATATATATGGCCGGAATATTTAACAACCAATTTCACAG
TCAGATATGCATATTTTTTTTTTGCAGACTGATTATGCTGTTCCGTATTG
TGATCTCCCTGCAATAGATCAGCATGCTTTATTTCAGCTGGAAAACATTG
TGAAGAACATTAAAGAGAGTTACGAAAATTACCAATTTTTCAAAATATTT
CAGGTAACTTCTTTTGGGTTCTTTTGAATTTGAGGTTTCAGTAAGTTGAG
TCATTGTTGGAGCTGGCATTAGTCAACATGTATTTGTTGATAAAGCTTTC
TTCAATATAATCCTCATAATCTTCATCATCGGCAGCAGCGTGACCTTTTC
TCGAAAAACTTAGGCGGGCTAACATGAACTACATTTGCATACTACGTAAA
TAAGTCTACCCCCTTGGCTTGGTTTATAGGTCAGCAGTTAGTCCCTTATC
TCTGAGATCTTTGCGATTAACTTCAACCAAGTCCCCGAATGGCCGAATAT
TTGAAAATTTTGAGAATGGTAATCAGAGGAGGGAAAATGGCTAAAATTAT
ATTGAATGAGTTTGTATATATGTAATATGTGGGTCAATGATTGCTACTCT
GTGTGACTGTCAGGTATGCATACTGACCTGACTTTATTTTCTCTTTCACC
TTGTTTCAGACCATCCAGCGGTTTGTGATTGTTGATCTCTCAAATTTCTA
CTTTGATGTTGCTAAAGATCGACTTTATGTTGGGTAAATAATTTATCGTT
CTGTGTGTTAAATTCATATTTGTACACAGATAAACTTATATGTTCTGATG
CAATTAGTAAAACTTAAAACCTAGTAGCAATAACTGCAAAAAGAAAATGC
AAAATTTCGTATGGATTTATAATGGTATGCAGTAGTAATAATTTCGAAAC
ACATCATAATGTCACTAATACTACGTAGCTATTCCCCAAAATATATATAC
AATGTCTTTGTATGCAGAGTATACTTCTTTTTCTTTTACTGGTCATTGAC
AAGCTAAGTGCGCCAATTTACTATGTTCCAGGGGCACTGCAAGTTTCACA
AGGAGAAGTTGTCAGACAGTCCTTTCAGAGCATCTACTTTCCATTGCAAG
GGTGATTGCTCCAATACTGCCTCATTTGGCTGAGGATGTCTGGCAACACC
TTCCTTTTCAATATGCTACCAAAGATGGTGACATCGCCAAATTTGTTTTC
GAGTCGAGATGGCCAGACCTAAATGATACATGGCTTGGCTTTCCTGTGAA
AGAAGTTGAATTTTGGGGGAAAATTCTAGAGGTAGGGCATGGTTGAATAT
TTTCTGTCTTAATCTTAAACTAACAAACTTCTTTACAGGTTGATTTTGGT
TGTACATATTTCTTAAGTAACAAATTGTTATTTTATATATGAGCCACAGG
ATTTTTTATTGAGTGTCTAGTAGCACCATACATATCTAGGAGGATTTCGA
CTATAAATTCTTAAATTTTGGACGGAACCTTTGTGGGTCTTAAAAATGGT
CTTTATATAGATGTATTAACAAAGAGTCTATCATTTTGATATATTTTTTT
TTTTCTAAATATGGGATTCTCTCACTCTCGTTTAATTCTGGTTTATGAGA
TGGGCAGACTTCCATAGTTCCATTTTTTTGCTGATTGCAACCATTGTCAT
GATTTTGTCTTAAATGCATGCAACCTCTCCATAGATTCTTTTTGTTAGGC
CCCTTTATCACCTATCTTTCATGTTCATAGCCTTCCATTTTATCTGATAA
TTATCAAGTATGTTCCTATAGTTAGCTGCAAAACTCAAATTCTTATACTT
TACAATTGAAATGATGTTCACCAGCTGAGGACTGAGGTGAACAGAACCCT
GGAAGCTGCTCGTACTGGAAAGTTGATTGGATCTAGTTTAGAAGCAAAGG
TCTATCTTCATGCATCTGATGAAAGTCTGGCTGTGAAATTGAATGAAATG
TGTGAAAATAAGAATGATGCAGACACACTGTACCGCATATTCATTACATC
TCAGGTATGCTTAGATTAAACCTTGCTCCAGTTGTACAATGTTTTTGATT
TTAATGCATCTTGACATTTACTTTGTTTGGCTATAAGTTTGTCTATGTGA
TTAATTCCTTATGTTAGGCTGTGGACATGTTGGAGCATCATTACATGTCC
ACTGCCCTTGGGTATAGGATTCAATTGGTAATTTGTTTTAGATTTTTGAT
CTATAACAAGTATGAATTGTCTATATCCCCTTGCTTCATATACCATTTGT
TGGCAATATTATTTTGATCCGATATTGAGTACTACATGTAATACTGTTAC
TACTTACCACGAAGTAGGCATTACTTGAACAAGGTCTAAATTGTTGTATT
GTCTGTTTCACATGTCTCTATTAATATCATATGCGAAGCGTAATCTAAAT
AGTATCTGTAGTCGTTATTGTAGAGTTTTTCCTTATGTTATAGCTTTACA
TCTTTATGTTGCTATGATTCTCTTTATCATTGTCTATACAAAGTAATTGC
TTAAAAATATACGGTCAAACTGTAAAAGCATGCACCTGAGTTGTGATCTT
CAGGTAGAGATCCTTTCATCTTTGGACAATGCACCGATGGAGAATATCCC
CTACACCGGAGAGTATCTAACAGAAGGAGATAACAAGATCTGGATTGGTG
TCTCACGTGCCGAGGGATTAAAATGTGAAAGATGCTGGAATTTCTCATCT
CAAGTTGGTTCTTTTGCCGAACACCCAACACTTTGCAGCAGATGTTTCAG
TGCTATTGATGGTCAATTAACACCTACTTTAGCAGCAGCGGTCTGAACTT
CCAAAAGAAAAAAAGGTTCCGTCAAAGCTAAAATTAGTTCACAAGAAGGG
Sequence Length:
17250
Sequence Checksum:
b379afd268f50e0f397feed2b6ea2d16
View location in JBrowse:
Gene:
LOC108204395
Gene Biotype:
protein_coding
Gbkey:
Gene