Resource Type:
Gene
Organism:
Name:
LOC108203182
Identifier:
LOC108203182
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017371965.1, is a part of gene, LOC108203182. |
| The genetic_marker, MK004837 K2281, is located in gene, LOC108203182. |
| The genetic_marker, MK004592 K2036, is located in gene, LOC108203182. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017371965.1 | XM_017371965.1 | mRNA | DCARv2_Chr1:35323478..35342711 |
Sequence:
AGAAAGTAAATTAATAATCTCCACTCCCCACTCTCTCACCTTCCTCCATC
TACTCCCAATTCACTTACCTTTCCTTCTTTCACAGCAAACCCAATTCACA
ATTTAGGGTTTTTCCCCATTCCCCTAATTTTCAATATATACATACACGAA
TCCTATCTCTATAATCTATAATCACTCTCTTCACTTTACACACACTCACA
CACTAAATTAGGGTTTTGTTCTCCGATATGCAATTCGTAGCTCCTGATTT
AGGGTTCACTATGTAATCACACTATATATACACTGATTATTATATATATA
TGGGGAATTTATATGTTTTATCGGTTGTTCTTGTTTTGTTTGTTTGGATT
ACAAACCCTAGGTTTTTTATCGGTTATGTGATTTCGAGAGATGAAGAGTT
TTCGATCTCGAATTTCGATGATTTGAGTTTGTTTCACCAGGATTACTCAC
CGCCTTCGCCACCGCCTCCGCCTCCACATCCACCGTCGGTGACTTGTGAG
GATGATTTAGGTGGAGTAGGGTCGTTGGATACTACTTGTAAGATTGTTGC
GAGTGTTAACATTTCGAAAAATGTGTATATAGCAGGGAAAGGCAATTTTT
ATATCCTTTCGAATGTTAGTGTTACTTGTTTGTCTCCTGGATGTGAGGTT
TCGATTAATATAACGGGGAATTTTAGTTTAGGGGAGGATGCTCAGGTTGT
AGTTGGTTATTTTGACCTTACGGCTGATAATGCGACTTTTGGTAACGGTT
CTGTGGTGAATACGACTGCATTGGCAGGGGATCCGCCGGCTCAAACGAGT
GGGACACCACAGGGTATTGAAGGTGCGGGTGGAGGACATGGAGGGAGAGG
TGCTTGTTGTTTGAATGATAAGGAGAAGTTACCAGAGGATGTTTGGGGTG
GGGATGCGTATTCGTGGAACTCTTTGAGGATGCCGGATAGTTTTGGGAGT
AAAGGGGGGACAACAAGTAAGGAGGAGGATTATGGTGGCGGTGGAGGTGG
AATTATTAAGTTGATAGTTAACAACTATCTTGAGGTGAATGGTAGTTTGG
TGGCTGATGGTGGGAATGGAGGTCCTAGGGGTGGAGGAGGATCTGGAGGC
AGCATTTTCATCACTGCTCATAAAATGTAAACTTCTTCTCCTATTTTGCA
TGACTTTTTGTTCTTAATTTAATCACTATTCGCTTGTTAGAAATGGTGTG
CATTTATATTACATGTATTTTTTTTAATGCAATCTATCATGTATTTCATG
TTGCATATTTGGCATTGCCTGGTTTAGTGTCTTGTCAGGGATCTTGGCTT
CCAATTATTCTGAAGTGTTGTAAAATTTTCAGGATATGCAAGATTGTTTA
TCTCTGTGTTCATAATTTTGAATGATGATTTTAGGGCTGTATTAGTGTAA
TCAGAAATATGCATCCGAGAGAGAGAGAGAGAGATAGTTTCTTCCTAATT
TTTACTCTCCCTTGGTTAATTATTGACAGATTTTTTACTATCTGTGAATG
TCATGCTTTTTTATTGTGTAGATACAAGTTTATATTGTTATATAGAGGGT
AAAAACTGGGAACTAAGGAGCTGCTGCACATATTATGCTTTGGGAGGAAA
TTTTATCTGTCTCCTTGAGATTAAACTTGCTTTACATGTCCCTGCAAATG
CTTTTCTCTAATGATTATGGAAAGTGGATACTGTTGAAATGTGCTTCTTC
GTAAAATACTGAGAATATGTGAACTTCACAATATGGGAACACAGAAGGAA
GCAAATTGATAAAGGACTCAAATTTTGTGTTACACTGCGCACAAATCTAC
TGAGTAACATAATATTTACAGCAACATAAGTTTTATGTTTTTTCTTTAAG
TTGAATGCTGGAACTTACTAATTTCTATCTAAACTTACTTGAGCTCCATA
TCATGATAGTTATACATAATTCTAGAGAATCATAAAAAAGTCACTAGATC
AGGTTAGTTTGGTTAAGGCTACTAGGTGCTGTATCTATCTACAATCTGCC
GGTGATTTGGTGGTAATGTGTTGGCTGCTTTGAGAATAAGTATAAGATGA
TCACTGTTAATGTGCCACGAAAGTCTATCTGTTTACTTTTGATATATAAT
AGGCTTGTAAAAATTAAGATGAAGTTGATGAGGCACATAAACAAATTTTG
CTATTTTTTAGCAATTAGGATGAAGTAAACAGAGATAAAAGATAATTGAT
AAGAGGGAAATTGTGTCAATGGAAGTGTTTAAACTAAAAACACGCAAACC
TGTAGCTGTAGAATTATTGGCGCTGATGTTTAAATCTTTCTGAAAAAACA
TGCTAGACATTTAGGCTTCATGAAGAAAAGTCCTACATATGTGCAGGCAG
GAGGTAGACATGATTCATGATTATAATTATTTGTTACCCGCTCATTGATA
TTATGGATACATCCTAGTGTACTAATCTGCTGATTACTATAACAGCCCTC
TATATTTTTTCATAGAGATTCTTAACACCTTCACGTATAACTGAACTTAA
AGCTGTGAAGTATTATGTAGAGGAAGCAATGAGTAGACATCATACCAAGA
TAGGGTCGATGGCTAGCAAGATTATTCTTTTCATGAAGAAGCTAGAATTT
CTTTCTATATGCTGCCTCGTATCATGTATTTCTGATTCTCCTTTAGTCGT
CTGTATTGTGTAATTAGATCACTGAGTTGTCTCCAAGTTATTGCCTAGTT
AGGACAACTATGAGGTCGTACCTAAACTTGATATCAAATTCTTGCCGCAA
TTCGGAATCAATTTGAGCCATAGTATTTCCGTAAAATTTATTCATAGGAT
AATTTTTAGTAGCTAAGTATTTTTATTACTTAATAAGCCTTGTGGATGAA
TGCTAGCATGTTGCGAGTACTTAATTGAGTAGGATATGCAGAAGGAACGT
AAGACTTGTATTTGAAGAGCACAGAAAAAAAGAAAAGAAGTTCTTATACT
TGTAGATATATGTCATTTTTGTTTTTTTTTTCCTTTCCTTGATTGTCTTT
CAATTTTTCCCTAGGATGTCCATATTAGTCCATCTGCAGATGTGATCTCA
TTTTTCTTCTTTACAAAGTTTGGTATCAAGATGATTAGATCCTTAAGTTC
TTTTGGTTGTGGATGTATGAGTCCATATTAAAACAGAACTGAGTGTCAGT
TTAATGTAACTGGACTAGTGAATTTGTAATAGTTTCTAGTCTTTCTGAGT
TAGTTTGCTTTATGTATAATACATTAACACTTTTTTAATCGGATATAATG
AAGGATAACAACTACAAATTCAATATTAAGGAAATTAAAGTAGGACAATT
CTATGTTGCCAATGAAACAGGACACTCGAATTCCTACAAGCATCTCTAGA
ACTCTTGTATAGTTATTCCCTGCAGAATAGGTTACATTGTGTAGCAATGT
TGGTGTTACACTTATGGATGGGGTAAATAGTGTACGCCTACCTGTATACA
CAAAAGTGATGCTCATGTTTGACTGCTAATGGCCACAGTTTTCTTTTTCA
CCCACAGTTACAGAAATCACAAATTACAGTAATGTAACTTAAAGGTTGCC
CTGACATCATATATTTATATATCTATGGTTTATTTTTCGAATAATCAAGA
ACTGATTTTAATAAAATATATCTTCCAAGGAAATTGAACTTGATTTTTGT
ATCTAAAAGAGTCAGCATCATATAAGCCAACCTACTGCATATATCATTTG
TTTTGTATGAAAAAATCAAAATCGTCACCTTTTGAGGCGATAAATTTGTG
TTGTTTATTGCCTTGTCTTTAAGTAGTGGGTTAACTTTGCTGTGTCAGAG
GTTAGTTCCTTGAGAATTGGGGCTTATCTATGCATGAAATTGTCTGTGCT
GTAAGCACGATTGTGAACACAAATTATGCCAAGGATGCATTCAAGTGTCA
ATATCTGCACTATTACTTTATCCGCTTCTGAAAATATGTGGAGTATTGTT
TATCACACATCAGTTGCCTTGATATACTGATCGATCGATTATACATCTGT
GTTTACAGGATTGGTACTGGCACAATAACTGCTTGTGGAGGTGATGGGTT
TGGTGGCGGGGGTGGTGGAAGGGTCTCTGTTGACGTGTTTAGCAGGCATG
AGGATCCTAAAATTAAAGTTCATGGTAAGAGCTATTATGCGCGCGCGCAC
ATGTCAAATACAACTGCTGTTTGGTTGAATTATGACTAGATTAAACTTCA
TTTCTTGCTGCCAGTGCTAGAATCAACTTGCTAGTGGAATGTGTGTTTCT
CTGCCTTATTTTCTGTATCTGGGTGTGAGGGGGATATATGGGAGGGCTGG
GATGAGTTAGCTGAAGCCAGGCTACTGGCACATAAATTTTAAAATTGGCT
CCACAACCACAAAAGTTCATAATATCAGTGGAGCTCTAGAACCTTATGGA
ACGTTCACTCTAGATAGGAGAATCACTTAATATGACGTTTCTATTATCTA
GTATGTTTCGACACAAATGATGAAGCCAAATTTATGTAGGTCACATGTCA
ATATATATCGTAAAATTCCAATTAGATTACTTCAGGTTTGATAAGATTAT
AGTTTTTTTCCTTTTGGAAGATACAGGAGGGGTGCATGAAAATGTGATTG
ATAAATGGGCTTTTGAAAACGATATTATATCATTTTAGGAGTAAATGTGA
TAGTTCATCATATCCCCTTAGGTTTTCTAATCTCAAGAATCAAGAACAAG
GAGACTTGGAAAAAAAATATTATATCTAATACTGCTGTCACACACACACA
CACATAATTATATGCGTATGTGAGAAAATTTTAGTCTTCTTTTTTTTAGG
GGGTAGATTTGATGTTTTCAACCTTGTCTGTTAGTGGTTACAGGCTTATG
TTTCATTTCATACTATTTTTTGAGTTCAAGTTCTCGCAGCTGAAAATTAT
ATGTTCTTGGTTGCAGGTGGAAGCAGTCTTGGTTGTCCTGAGAATGCAGG
TGCTGCAGGGACTTTCTATGACACTGTTCCACGGAGCCTTTTTGTTAACA
ATCATAACAAATCAACAGATACTGACACACTTCTTTTGGAATTTCCATAC
CAGCCCCTGATGACAAATGTTTATATTGAAAACCAAGCTAAGGCTGCTGT
CCCTTTGCTCTGGAGTCGTGTCCAGGTCAGTGAAATGTGGATGATATTCC
ACAATTCTTTTTGAACTAAAAGAAGTAAGAACTTCGCTGTATGGTCATTA
GGATTTGACTTTTTTATGAATAGTTACAGCATAACCTGAACTTTAAGTCT
TTGACTCAATATAGACTTACAGTCTGATATCTAAACTCTTGGCCTGACAT
TTGCTTCACGTCTATAAATAAACCCGTGTTCTTCATATTTTAGTATAAAG
AAAAAATTTGTACATACCGGTACACAATGAGGGTTACTATAAACAATTTG
GATTTGGGGCTATATACTTGTGTACAATAGTCACTCTGAGTTCTGTCCCG
TACTGAATATAAGTGTCTTCACTTGTTGGAGAATTCAATATGAGTAATCT
AATTAGTGATCTCAGAGGAAATGGGACAACCAAACAAATCTGCCTGTTTG
GGGGATGATGCATCCTTTAGGCAAGTGTGTTGATTTTATCTTAACACTCA
CATCTTATCTGCTTATGCTGTGTTACTGGTTTACCAATATTTTAGTGCAT
TTCAATTTCATTATTTTTTTTTGACAGGATCCTTGTTTGTCCTTTAAATA
TTAGAAGTGCATCTGCCTAGATACCCCCGTCATTCATCCGAAATTTTGAT
TTTTTCAGTTTACCAATTAATGCTGAGTTACTGTGTACAAATAAAAATGT
ACCTGTAAGCATTAAGAAATGTAAGAGTTTCAACACCTGCATCTGTAAGA
TGGAACTATTTATCTTAAAACCTAATATCTTCTGTGGAATGTATCTCTAG
GCACTATAATTAAGCCAAACATGTACTAAATATTTGCAGGTCCAAGGACA
AATCAAACTTGTAACTGGTGGAGCGTTGAGCTTTGGGCTAGCACATTATT
CTTTATCAGAATTTGAACTGTTAGCAGAAGAGTTGTTAATGAGTGATTCT
GTAATCAAGGTATTCATCAAATCTCATTTGTAAATGCTCTGTTAATTGTT
GTTATGTGGGCAATGTTAAGCGTTCATAGAAATTTTCTCAGATTTTGAAA
AAAAGAAGAAAGGATTGAGATAAAAACAGAAGATATTGAGATCATAAACA
AAAAAGATTTAGATAATGGGAAAGAACACCTCTGTCAGATAATCATCTAA
GATTCTGTTGTTATTACTTAGTAGTATGTGCTCAGGCAACCTGTAATATG
TCTCCAAATATCGAATTATTACTGTACAGAACTTAAGAAAAGCAGCTAGG
ATCGAGCTCACACTTTGGTTTGAACATCTAAATTAATGATACAGAAATTA
CTGACTAGAAGATAATAAATGGCATATACCCAATTGTCAGCCAACTGGGA
AACATCAGTAAATCGGATTTGGTTTTGAGAAAAATTCATGGTTTTTATAA
TAGTTGTAAAAAGTAGATGGGCTTTTATGTATTGTAATTGATCACACTCC
CTCCGTCCCATTTATGTCAGCCACAATCCCAAAATTTTACTTGTCCCACA
ACAATATAGTTCTTTGGTAACTATCAGTGTGTTTAAGGGGATTGAATAAA
ATATGGAATTTGATTGATGGACAAAATAAGTGGGACGGAGGGAGTAATAT
TTATTTTCCGTTAGCAGTGAGATTTTTTCAAGAATGTAAGAGCAGCTTCT
GTTTACATCTTAGTTTATATCTATATTTTTGTTTAGACTCTGATTGTTTA
TGAACATGAAGTAAAATCTTCTACATTTTAAAGAAAAAGTGACTCGTAAG
AGGATTATTTGGTCAGATAATCTCCCTTTCAGACGATCATCGTCATAGCT
TAACCTTTTGAACAATATGTTCTCTGTTTTCTAGTTCTGTTTGATGTATT
CTAAGTCACTGATGGCGTGCCCTAATTTTGTTGATGCTTTATAGGTTTAT
GGTGCACTTCGGATGTCTGTCAAAATATTTCTGATGTGGAATTCAGAACT
GCTAATAGATGGCGGTGGAGATGCTAATGTTGAGACATCCTCGCTTGATT
CTAGTAATCTCATAGTTCTCAAGGTGCTCCAACCTAATGTCAATTATTGC
CTTGGCTGGTTCCTGTTTGGCCTAGATTTTTGACTTGTAATTATTTAACT
TTGCAGGAATCTTCTCTTATCCATTCAAATGCCAATCTGGGTGTTCATGG
ACAAGGTTTATTGAACTTGTCTGGACCAGGAGACACTATTGAAGCACAAC
ATCTGGTTCTGTCTTTGTTTTACAATATCAATGTAAGTGGATGTCTCATG
TAGTTCTCCTTATTGTTCATCATCTCTTGGATTTGTGGCCATAAGATGTC
CAATTTTTACTTCTGTATTTCTGTGAGACTTTTACATATTGTGGCTCTAC
AGAAACCTTTACTTAGCTTTTGCTGTGTTTTTTTTTTTTTGCTAAATTGT
TTCTGTTTTTTTGTTCTATTTTATTTTATTTATAATTGTGACCAGTAACA
AGGCATATGTTCAAGTTTGATGGTAGTAGTTTACTAGTTTCTATCAGATT
ACATATGGTTGCTGTGGCATTTGCATTACTCAATACTTTTTTTTGGCAAC
CATCAGTTATCTAAATTGGGTTGTGTCTGGATCACAAGTCAAATCTTTAG
ATTTGTAGTGTGTTGAATGTCTTGTTAATTAGTATAGAGTTAATGATTGA
GGAAGGGGGATGCAATTAGGCCAAAATTATTGGACATTATATTGTATATC
AGAATTTACTTGTAAGGTGCTAAGGTTCTCAAATTCTGACATGCTTTTGC
TAATTAAGTGTCCTAGTATTATATATTATATAAGTGTGTGTGTGTGTGTG
TGTATTTAGTGCTGAAATTAAACCTTCCATACACCATCTTTTTAATTTAC
TGCTGATGGCAGAAATGATTCACAGGATGTGCCTTTATTGTTTGTGCTAA
ACTTAATAGTGCCATCTCATTCTAATGTATCTGGTGTCATTGCATAATGA
ATCATTACTGGTTTACATATTGATAGTATGTTTAGCGGAATCACAATTGC
TCTATGCTTCAAGTACTTTGTGAAGTGTAGGTTGTACAACATCTGCTTTA
TGTAACAAATTTATATTAACTACAAGTTTTGCTTCTTTTGGCATGAAGGT
TGGCCCTGGATCTACTTTGCGTGGTCCACTAGTAAATGCCACCAAAGATG
CTGTGTAAGCAGTGCTAATTTTTTAATTTTGTTGTGATATCATCTTTGTA
TATCAGGAGGCAAAATTTAATTAACCATTTTTACCTGAAACTAGGGTACC
AAAGCTGAATTGCAACAGTCAAGAGTGTCCAGTTGAATTGCTTCATCCAC
CTGAAGATTGTAACGTGAACTCTTCGCTGTCCTTTACGCTTCAGGTGTTT
TTTTAATAAATTACGTGGTTAGCCAATTGGTGTAGTTTTTGTAAAATCGT
TTAATAATTTTCATTGTAAATCATGCTTAGATATGTCGAGTTGAAGATAT
CCTTGTTGAAGGCCTTGTAGAAGGGTCAGTTGTTCATTTTCACCGTGCAA
GAACTATTGACATTCAGCCTTCTGGAATCATCACCACCTCTGGGATGGGT
AAAGCGTGCCTTATTACTTTAATATGTCATTAAAAATATATGGTTATCTT
CTGTTCGAACATGTGTTAAATATGCGTCCAGTGTGGTATAGTCCATATAG
AATATATCTCACCCCAAATAACCTTTCCTGAAAGGAGTGCATACCTTTTG
ATGACATTTTCTAGATGCGTATCACTGTGTATTGATATAACTAGTTATCA
GTATTGTCTTTTATTATGTCTTTGCAGGTTGCATTGGTGGTGTTGGTAGA
GGTAAATTAGTTGGTGGTGTTGGCAGCGGAGCTGGGCATGGCGGGAGAGG
TGGTAATGGCTGTTACAATGATAGCTGCATTGGGGGTGGTATTTCATATG
GAGAGGCTGATCTTCCTTGTGAACTGGGAAGTGGAAGCGGAAATGATAGT
GTAATTGGTTACACAGCTGGCGGCGGTATTCTAGGTGAGCTTGAGTTTTT
TTTCTTTCAGACTTGTCGAGTAAGAATATTAAATTTCTGATCAAAATCTC
ATTTAATGCCGTTGCTGCTAGTCATGCTACCTGTTGTCGCTCTTTTTCTT
TTGCCTCAAAAATTGTTCGACATGGTGTGTAGCTGGAAAAAAATTTTCCT
GTAGCAAATTAATCAGCTGACCCGTACTCAAGAATTTTATGCTGTAATGA
AGTCCAATGACTTTCTAAAAGATTAAAATAGGTAAGAGGCTTGCTAGTAG
CTTAGTAGGACTGGTGATTGTACTTGTAAATTGACTTACTTTTACTTGAT
GTATATAGGCTGAAATCGCACATCTCTAAGTGAAGAAACTTGTAATAAGA
GTGCTTCAGTATATACCTTGGATTGGAATTTGTATTCTCAAACCCAGGGA
CGGATCTAGAAATTTGTGATTGTGGGGGCAAAAAAGTTTAACCTTGTAAT
TGGTGAGATTTTAAATCAGTTTAAACATAATATTAGAGAAAAATGAGGTA
CAAAGGCAAGCGAAATGATAAGTTTTTTGAGAAAAAACACCAGAAATAAA
CTCTGCTCTTAGGTGTCAACATTAGGTCATTTACCATGTGGGCAATAACT
AACATATTCGCACTCATGGAAGATATATCATACATATATAAAATTCAGTG
GGGGAAAGTACCCTCACTGCCCCCACTGTAAATCCTCCCCTGCTCAAACC
TCTCTAAAATTATCTTCTGAAGACTGGAGTGAGGCCTTACATGAAATGTA
AACGTATAGATAAATACATTTTATATCAATAGATACAGAAGAGGGGATCT
TATTAGTCTGCCAACTTCTATCCTAAAGAAGTAGCTCCATCATGCAGCAG
TAGTCATCTTTGTATATTGTAATTGTAATACAGTTAAACCTCGATGAAGT
AATGCTCAGGATCAGGATAGAAATCATTTTCGAGATTAAATATATAGTAT
CTCTATCAAGTTGTGACCGATATATTTTGTTAATTTATCGATTCTTATTG
AGATTCTACTGTACGTGGTGTTTAAATACAGTAATCAAGTACTACCAAGA
CATGTACGAATATGACTCATATTCGGTTCTGCCGGACCGGACCGGACCGA
CCGAATTATTTCGGTTCGGTTCCGGTTCGGTCCATATACAAACTTCGGTC
CGGTCCGGTCCGGAAAATTTAAGAACTTCGGTCTTCGGTCCTTTCGGTGC
GGTCCGGTTCTGGACCGAACCGACCGAATGCTCAGCCCTAAATATGAGTA
AGCAATGTTTCAGATGTCCATCTAAGACATCAAATGATATGCAGTATGCA
CTTGAGTTTGAATGCTGCAATTTTCTTAGGTTAATGTCTCGGCTCGGTTA
AAATTAAGTTTTGTACTTTTATCACTTGTGTTGTTTTACTATGCAGTGAT
TGGTTCGTGGGAACAGCCGTTAACAAGCTTATCAGTTAAAGGCTCAGTGA
AAGCTGATGGAGGAAGTTTTGGGGACAAGAGTCATAGTAGATACTTTGTT
GGGTCAGATAATGTGAATGAAGGTATTGGCGGTGCATCTGGTGGAACAAT
TCTTCTGTTCTTGCGGGCACTTGCTCTTGGTGACTTGGGTATTCTTTCAA
GTGTTGGGGGTCATGGTAGTCCAGATGGAAGTGGCGGAGGGGGTGGTGGT
AGAATCCATTTTCATTGGTCAGACATTCCGACAGGAGATGTGTACCAGCC
TGTAGCTAGCGTGGAAGGAAGTATCCATGCTAGGTTTGTATTTATTATTC
TGAAAGTATCATCATTTGTTTGTGCGTTCTTCTGCATCTTCATAAACTAA
CCTTCTGATTTGTTTGTCCCAAGTTAGTGCCATCTCTACGTACTGTGCTG
CTGCTGTTTTATTATACTTCTCAATTATCTTGATTTTTCTTTTAAGTTTT
AACTGCAGTGTTCCCCCATCTCCTTACTTGGTATGTGTTTATATATCCAA
TGATATGGGGGTTCAATCCTTTTCTCTGTAACTTTTATATATGTCTCTCT
AGTAGTAGAGAAACCTTTTTAAGAGCACTTCGGTTGTTCTGTTTGACCAT
AGAATTATATGTACCAAGCTACAAACCTCCCGACTAAGCTGCCTGATCAA
AGCTCTTGGTAATTGTTTCTCGGACCATTTTCAGTTACTTTTAATCTCTT
TTGTGAACTTGTACACTGTAGAAATTGTTTTAGTTCTGTGTCATGTATCT
GCCTTCGTTCTTTTACTTCACTCTCTGTACTAATTTGTCTTTTTTTACAT
ATTACTAAGCTAAGTTTAGATTGAATTATAGCACAACATTACAATAAGGC
TACTTAATTTGTTGTGTCCAACATATTGATTAATTATACGAGATGAGGCC
GGATATATAGTTTGGAACCTAGTTTATTTCTGTTGAGTATTGAGCAATAT
ATTTCTTTTCTTTTTTTCTAAATGATACAACACTCATATTTTGCAAATAC
TACATCTACAATCTAGGAGTCAGGTTCCTTATGTCAAGCTACAGATTATA
TTGTCTTCAGTTATGAAACATCTCCTTCTAAGAGTCGTAACCTTTTTGTA
TTTGTCGCAAATATTGGCCTTCAGCAGATTTATTTCTCATGATATCAAAG
TTTTAGCTTTCTATTAATATTATTGTCACAGGTGTTGCAAACTTTTTATC
ATTTAATTTCACTGATTTGATGTTAATTACTATATAGCGGAGGCGTGGGT
GGGAAGCAAGGTGGTGCAGGGGAAAATGGAACAATAACTGGAAAAGCTTG
CCCAAAAGGGCTTTATGGGACATTTTGCACGGTATGTACACTCTGAGTTC
TTCCATTTTACTTATATATTGTTGGAGTACATACAATTCTTATCTATTGC
TTAAGAGTAATATATGAAAATCCAGATGCTACTTGAAATGCTTTTAAATA
AAATTGCTTGTAGTAATGAGGTTAGTATGTTTGCATATTGCCTTATTGCA
GGAATGTCCTGCTGGTACATATAAAAACGTAACGGGATCCGATATGTCCC
TTTGCTATGAGTGCCCGTCTTCTGGTCTTCCCAGGCGTGCATTTTATGTT
GCTGTCCGAGGTTATCACAGATGATCTTTTCTTTTTTGATTATTCATACT
CAAGTTCCTATGTGAAACTGTGACTTCTACGCGTAGTTATCAGTATTAGT
GTGTACACAACTAGTCTGCTTCAAGTTCTGGTATATGCTACTGTTGCTAT
GGCAATGGTGCTGCAAGCCTATTGATGTTTATTACTTGCAAAGGTTTTGT
CAGTTGCTACTTTATATTATGAAATATTGGTGTGAGTTTTATAATATTTT
TGTGTTTAATCTTTATCGACGCAATGTTATTGTTGCTCCTGTAGTGTTTT
ACATGATAATTGCATCTTTTGATTATGACCTTACTGTTGTAACAGGCGGT
ATCGCTGAATTACCCTGCCCTTACAAGTGCATTTCCGACAGATATCACAT
GCCACACTGTTACACAGCACTAGAAGAGTTAATATACACATTCGGTGGCC
CATGGTTATTTTGTCTCATTCTTTTAGGGATTCTCGTACTTTTAGCTCTG
GTGCTTAGCGTTGCTCGAATGAAATTTGTGGGCACTGATGAATTGCCTGG
TCCTGCCCCCACACATCATGGGTCTCAGATTGATCACTCATTCCCTTTCC
TGGAATCACTGAATGAGGTTATATTTTACTCATCATTAAAATAGCTTCTG
ATAATGTGGGCCAACATGCTTTACGGCCCTGTATTTTGTTGAGCTTTTTT
TAATGTATCATTCTTTTATCTTTTCATTTTTAACATGAACGATACTTTAC
ATATTAGGTCTTGGAGACTAATAGAGTTGAAGAATCACAAGGTCATGTGC
ATAGAATGTACTTCATGGGATCTAATACTTTCAGCGAACCTTGGTATCTA
CCTCACACTCCCCCGGAGCAGATTAAAGAAATAGTGTGAGCAGTCCAGCC
TTCTTTTTTTATTTTGCTTGCTGCTTCCCGTTGTTCAATTGAGATATACC
TTTGTTTATGTTTTCTATTTGTCAGTGAAAAACAAAGATTCTATGGGTTA
GTTTTTTACATGTAAATACATACTCCCTCCGTCCCTCTCGATTCTTAACA
TTGGGGGGACGTAGGCGTGGCACGCACTTTAATGCTCCTATAAAGTATAG
TTTTATAACTTTTTTTTTAAAATTTATTTTTGCCGAATAAAAATTTTATG
TTTAAATTTTTATTCAGAAAATTAAAATTAAAAAAAAAGTTATAGAACTA
TGTTTTATAGGTGCATTAAAGTGCGTGTCAAGTAATGAAAATAAAAGTTA
AGAAATGAGAGGGACAAAGGGAATACCTTTTACTAAGAGTATTGCACTAA
TGTAACAGATACGAAGATGCCTTCAATAGATTTGTGGATGAGATAAATGC
AATATCAACTTATCCGTGGTGGGAGGGATCAGTGTACAGTATTGTTCGCA
TACTGGCATATCCTCTAGCATGGTCCTGGCTACAATGGCGGCGTAGAATT
AAGTTGCAAAGACTTCGTGAATTTGTGCGATCAGAGTATGATCATGCATG
TTTACGTTCATGTCGCTCACGTGCACTCTATGAAGGGCTGAAGGTATTGA
ATAAGAGTTGGTAGTGGTAAATGTTGTAACATCATAAATTTGACTTTAGA
TTTAGTAAAATATGTCAAGTAGCGAAAACTCCTAGCCGTATAGTAAGGAA
TTAATGCCCTAGCCTGTTCATTTACTGCTTTTCTACTATGTTCACCTCTC
AATCTCCCATGTGAATTACTAACTATAACTTCATAAAGGTTCTAAAATAG
TCTAACTTGCTGCCTAACTTGAGGGAGATCTGGTATTTGAGAATTTGTCA
AACTTCCACTTGTTGAAGTAAACTAATGTTCTAACACACTTATACACTTA
TATATATATATATATATAAGTGTATAAGTTATATATATATATATATATAT
ATATATATATATATATATATAGTAAAGTTCTATTGAGACCACTTTTTTTG
GAGACCGTGGAGACCGTTTATGTTCTGCAAGTAAAATATGCATAAGAATA
TTGAAAAACTCATAATTTTGCAAATCATGTTGTACAAAGATCAGTATATC
ATTTAAAATCTTGAATATCATGTATGTTTTGCATGTAGAATATTATATAA
TATTTTATCCTGCGGAATATGTTTAGTTTGCAGAACATTTGTTCAATTTG
CTGAACATGCACATTCTACTTATTAAACATATATGTTCATCAATAATTTT
AATGAATTGGTGATATTTCTTCACAAAATAATGTATTCTGCAGTATTTTG
ATTTGCAAAATTATGAGTTTNCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGTAAAGTTCTATGAACATATATATATATATATGTTCCTTAAA
TTCTGTGGTTTAGTCGGAACTTGTTTGTTACAGCTGTTTTCAGAATAGAT
GCTCAAAGCTTGCCAATTAGTATAATGCAACCTGTTACCGAAGAATATGA
AGTAAAGGTATTTTAGATAGTCCCAGGCTAAAAGTAATCAATCCTCACCT
GAGCCTATGTGGCATTGTCAGCTATTATTTAAATTACTCTGCTGTGCGCT
GTTGTCTTGATATTGGAGCAATACAACAAATGGTGATACTAGTTAGATGC
AGTATTGGAGAGAGCAAGACCATCTGTAGTTATGAGCTTTATATGGATTG
TCCATTTTGATTTGGCAATGCACCTGCTATCGTGTCTATCACTCAGTGTC
AGTGGTCTTATTGCATACTAAATTTGATGCTACAAAATGACAAGTCTCCT
AGGAGGGAATTTTTCCCACTTTCAGTGGTAATATGGTTCTCACTTTCGGT
CTAGTTAATTCAGTACATATTATCACGGTATATTTTTATGAACAAGATAT
TCCTATATGTACCTTCGTTCCGGAAAAGAACACTAGTTGCAGCTGAGAGG
AATTTAACACTCTTTTCCCTCATATAGGTCAGAAGTAAGAATTATTGTTA
CTCCTGTTTAGTTGTCCTTTTACTTTACACTCCTTGATAATGCTGTATAA
TCAGAACATTTAGTTAATTTATTCAAATTATTATTTTTTAAATAAATAAA
TTGTGCTAGTTCCTTTTCCACAAGCATTTAAGTACACTAGAAAGTAAAAG
GACAACTAATCAGAAGAGAATATATAATAATCCTTACTTGTGACTAAGCA
TTTTAGAAACTTTAAATATGCTAATGAAGTAGAAGGGAAAATTAAATAAT
AAACAGTAGGGGAGTGAGTGCAAGTAATTTTATATTTATAAGTAATTTCT
CTTAAGAGGGGACTGAAAGAGACTCTTATTTGCCTAAATTCATTCTTGGT
TGATCCTTTGCCTAAGTATTTCTAGCGAAATCAAATGCAGGACAATACCT
TTATTTGTAGCTTAAAAGCTGTAAGCTTTGATGATTAGATTTATTAGCTC
TTCTGTGAATGTATTAAAGATAATCACACATATGCAGACTCACATAACTT
TGTTATCCCCTTTGAAAGAGTACAGTAAATTTGTTCTGGTATATGTTGTA
TATATTATTACAATTGAAATGTAGTTGAAGGTTCTTGTAGCTAATTGCAC
ATACAATGCTATAGGTAGCTGCAACCCCTGATCTAATGTTAGGGTACGTA
GACTTTTTTCTTGGCGGTGATGAGAAGAGGACGGATCTTCCTCCTCGTCT
TAGTCAAAGATTTCCTTTGTCTTTGATGTTCGGAGGTGATGGAAGTTACA
TGGCACCTTTTTCGCTTCACAGTGACAACATCATCACAAGCCTCATGAGC
CAGGTTTTTCATTATTAAAACTTACTCTTCAATTAATGTTTTATCATTTA
AGCCTTTATAACCATGGTTTGGAAATTTGTTCTAATTAGTCAACTGTCTC
TGTCAGTCTATTCCACCTACCACTTGGTACCGATTTGTTGCTGGCTTAAA
TGCACAATTACGTTTGGTACGTCGGGGTCGCCTCAAAACAATGTTTCGAG
CCGTTCGCAGATGGCTTGATACTTATGCCAATCCTGCATTACGAATCTCT
GGTCTTAGGGTTGATCTTGGTTGGTTTCAAGCTACTGGAGGTGGTTATTG
TCAATATGGACTTCTTGTCTATGCTGCGGATGATGCTAATCATCTATCCT
TTGGAGGTGTGGACCATGCAAAACCTAGTCAGCAGCACTCACGGTAATTG
TTTATCAGTCTCAAGTTTCTAAGCTTGCAATCATGGATAATTATGTTGAC
TAATTGCGTTTTTTTGCAATCATGGATAATTATGTATATGTATCATATAT
ATATACCATAAAGCTGTATCAATTTAAAAGGGGGTTTTCGGTGTCAGTGC
TATCACGGATGTGTTAACGTCAGTATGTGCTGGCACCTTTTTATTAATGT
AATGGTATATTATGGACATCATGCAACACTCATTTTCTAAAATTGTTTTG
TCATCCTGCTTATTTTTCATTATTCGCGTATACCTTGACTTGTCATTTAA
TGTTTTCCTTAGAATGCTTTCTGTTGCATATATGTCTCATTTACTGCAAG
CTTTCTCCTGACATGTTTTGGATGTAATTTGAAAATTTTACAAGCCTACT
ATTTGACTATTACCTGCCCCGTATTGTTTTCAGATGCTGCATATTATTTG
GTACACATTTTTATGGTGTTATATGCTCATAATTGCGTTGTCATGAATCA
TCACTATTTTATATGATAGTACAGATTTTACTTTCGAAATGAAACACTAT
AGCAAGTTTAGAGACTAGTAATTTTATAAAAAGTTGTAGCTCTGGCACAA
TATGGAAGATTTAAGATGCCAAGTCCCAGGTGTTTCTTGAGCGTTTGAGC
TCTGTAGTCCTATGCTTATAATTGCGTACATCAGCATAAATCATCACTAT
TTTATATGATATGGATTTTACTTTTGAAATGAAACATTATGGCAAGTTTA
GGCACTAGTAATTTAATAGAAAGTTGTAGCTCTGCCACAATATGGGAGAT
TTAAGATGCTGAGTGCTAGGTCTTTCTGGCGTGGGTGAAAAATTAGGTTA
CTTGTTTTCTTAGTTTGATTTTTACAACGGAAATGGTGTATGTTTCCACT
GGTGGAATCTCAATTTTACCGAAGTAACTTAACCCTAAGCCCAGATTTAG
TTATTCGGGTCATTAGGCACAAATAGGATAATTAGTAAAAAGCTTGTAAT
GGAGTGAAATTGGTAGCGTGCCTGCAAACTGACAGGTTGATGATCTGGGT
CTTGCCTCTTGGTGATTTCAAATCGTTATTAAGCACTGGCCTTCTTTCCG
CATAACTAAATTGAATTTGTTTATTATTTCTAAATAATTTTCTTAGCACT
GGCCTTCGTAATACATAAATAAATTAACCCTTCTACTCATTGTTGCTAGT
GTGGAAGATATAATTCATAGAGAGAATTATTATGGCCATCTGAAAGAAGA
GACAACCTTAATCCAATCACCCGTAGTTGATGAAACTAATATGAGACGAA
GAATGATACATGGTGGAAATGTAGATGCTAATGACATAGAAGTGCTGGAG
GAGAAGCGGGATTTATTTTTTCCTCTCTCTTTCATCATTCACAACACTAA
ACCCGTAGGCCATCAGGTAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCCCAATCTCCCTCACCCCCTCTCCCACCACCTCCTC
CACTCCCTCTTCCTTCAACTTATTTAAAGTAATTTTGCAGGATCTTGTTG
GGTTGATCATTTCAATGCTGCTACTAGGAGATTTTAGTTTAGTTTTGCTT
ACTTTGCTCCAGTTGTATTCCATTTCATTGGCCGACGACTTTCTAGTTTT
GTTTATTTTACCCCTTGGGATCATACTACCATTTCCTGCTGGAATCAATG
CTCTATTTAGTCATGGACCCAGACGCTCAGCGGGGCTTGCACGTGTCTAT
GCTTTGTGGAATATCACTTCTTTGGTTAATGTGGTAAGAAATCTCCATCT
ATGGTAATATCTTTATAAATTGAATAAGATTACATCAAATGCCTCCTTTT
TTCCCCTCCCTCTACCTAATGCTCTTCCTCCATGTTCAGATTTAATGATA
ATTATATTTTCCCAGTTATGAGACACCACATGACACTCTATGGTTACAAA
TGGGCGTCGCAAAATAGTGTTGCATTGTGCTTCCTTCTTAAAATTACAAT
TTTCTGCAGACTCCATAACATGATTCATTGATGTACTCTAATTTTTTGCT
AGGCGGTTGCATTTATATGTGGATATTATCACTACAGCACGCAGTCAAGT
AAAAAAGTACCTTATATTCAGCCGTGGAACATGTAAGTTTTGGGCACACT
TAATATGTACATATTTGGATAAGAATTTGTATGCTCAAACTTGTTTTACC
TTTGTTGCAGGGATGAAAGTGAATGGTGGGTGTTTCCAGTTGCACTAGTT
CTATGTAAATGTATTCAGTCCTGGCTTATAAATTGGCATGTAGCAAATTT
GGAGATTCAGGATCGATCATTGTATAGTACTGACTTTGAGGTGTTCTGGC
AGTCATGATATTTAACCAATCAAAAGTCAGTTTCTTATATTCTCTTTCGT
CTAATTTGATCCTGTCTTTTCTGTGTTTTTTTTAATTTTTTTTTTTTCTT
GTCCCTTTTTTAAGATTTTAGTACAGTAGGAGTTACCTATGACGGCAGGT
TAGAAATGAAAGGAAATGGAAGTACAGAGAAGATGAGGGAATATTTTGGA
CCCCTCATTTCAGTGATATAGTTATAGTTTTCTGCACCGTGTAAATATTG
CCTTGGCAAATCATAGAGGGTTGTAATCTTCGGTGATTTTCATAATGTTA
TCATGTTATGGTCCACTTTATTATATATATAGTTTTGGAAAAGCTTAATG
AATGCAAATGAGCAGGAGGATTAAAATGTCATA
Sequence Length:
19233
Sequence Checksum:
df950de4051c550fb85965416bd8a4ee
View location in JBrowse:
Gene:
LOC108203182
Gene Biotype:
protein_coding
Gbkey:
Gene