LOC108204532

Resource Type: 
Gene
Organism: 
Daucus carota subspecies sativus
Name: 
LOC108204532
Identifier: 
LOC108204532
Cross Reference: 
NCBI Gene
Relationship: 
There are 2 relationships.
Relationships
The mRNA, XM_017374023.1, is a part of gene, LOC108204532.
The genetic_marker, MK005265 K2709, is located in gene, LOC108204532.
Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
Transcripts: 
Transcript NameIdentifierTypeLocation
XM_017374023.1XM_017374023.1mRNADCARv2_Chr1:40712850..40729494
Sequence: 
TTTATCTTTGTTTCCTTCTTTCTGTCCCACGTTGTTTCCTTCCCTGTCCT
CTTGCAAGAAAAATAAGCCCCAGCTTCTGCAACATCAATCTTCAGATTCA
ATTCTTTACCGTTGCCTACACAAACTGTTGATTATATATATAGAATCTAT
ATAAAATCTGGGAATTCATAAAGAGTTTGATTTTGAGATAACAAGCAATT
AATATATTTATATATTAAATATATTGATTGTGGGGATTGAAAAGATGAAG
GCCATGAAAACTATCGAAGATCTCATCGAAGAAGCGAAGATTCGAACTGT
TTGGTGGGCCCTTTGTATATTCTCTGTCTCGTACTTCTTAACACGTATGT
TTGCTCTTCATCTCTTGCTTCCTTATTATTAAGACGCGCTTTCTTTAATT
TGCTTTTGCTAATTATTTTCGTGGTTTTTACTCGAATTATTTTGTGTGAA
TTAAGTAATATTTGTTGCTTTTTACTCAAGATTCAAGCTTAGAATAGGCT
ATTTGCAATTGATGTTTCTTTTTTCAATTTTGCTTTGGTGGTGCCATTTT
CCTCTTTACCTCATTATCTGTTCTAGCATTAGTCTGTTGGATTTTCTTGT
TATTTCTCGAGATTTTAAATTCAAGCTAGCCCTATTAGTTTTAAGTTAAG
AAGTAAATCTTGTTGACCCTTTCTTGGGTAGTTAGTGTCCATCCTCAAAT
TGTAACCAATTATAGGGTTTTCTGTTTTTGGTATGATCATTTATAAAATT
GTAATACAACTCACTTGTGCATGTGTTTGCCGAGATTGAACCTTCTAATT
TTGTTACAAAAATAAGAGCGGGGAATCCACTTGACCACAATGCTAGGATA
CTTTTTGTGGTAGGATGTGGAAGCTATGGTTTTTTATTTTAAACTTCTTG
CCCCCTCTGTATGTTTGTATAACTTGTAATGATTTGACGGTGTTGAATTT
ATTAATCTTCATGCAGATACAAGTAAATCAATGTGGATGAATGTTCCTAT
ATCTATTCTCATAGTTTGTGGATTACGGATATTGTGTAATGAGGTTGAGT
TCCGCTGGAAGGTCCGTAATATCCGTCGGCAGACCTATCTTTCCCACTTA
GAAAAGAAGCAATTATCTGTTAATGATTCTCGCCTTTCGAATTCCCCTCC
ACCTCCAAAATGGAAGAGAAAAATTGACTCTCCAGTTGTGGAGGCTGCGA
TGGATGACTTTGTAAAAAAACTTTTGCAAGATTTTGTTGTAGATTTATGG
TATTCAGATATTACACCAGATAAAGAGGCCCCTGAGCTTATACATGCAGT
GGTCATGGATGTACTTGGAGAAGTGAGTGGTAGAGTAAAGGAAATAAACT
TGGTTGAATTGTTGACGAGGTTGTTTACACAAGTCTTCTTTGTCATTTGT
TTAAAAGTCTTTTTGGAAGCTTTTAAGGTCGTGCATATATGAGTTCAGAG
CGATCGTACTAAACTTTTGGTGATTGTTTTCAGGGATATTGTAGACCTTA
TAGGTAAAAATCTAGATCTATTTAGAAGAAACCAAGCTGCTATCGGGATG
GAAGTTATGGGGACGCTGTCTTCTGAAGAAAGGGATGAAAGGTTGAAGCA
TCATCTCTTGGCTTCTAAGGAGCTTCACCCAGCATTGATATCTCCAGAGT
GTGAGTACAAGGTGTGAGTTGAGTGTAGCTATGCATAATTAATTTTATTA
CAGAGCTCTCTGTGTGTTGTATCGTCTGAGACTTGTAGTTTCTGTAGGTT
CTTCAACGGCTTACGGGCGCGCTTTTAGCAGTAGCACTTAGACCACGGGA
AGCCCAATGCCCTCTTGTTCGATGCATTGCCCGGGAGTTGGTAACTTGTT
TGGTGTTGCAACCTCTCATAAATTTGGCCAGCCCTGCGTGAGTAAATAAA
TATATCTGTATTTTTTCATAATAAGTGTCTTCCTCTTTATCTCTGTTTTA
GATATGTGTCGTCCTCTATATGTTTGTTTCTTTATATACATGGTTCATGG
CTGTCTCAAGAAACTTGCAGGCTGTGTTAATATGAGTTCTGATTTGTAAT
TAGTATTTAGGCTTTGACTTGTTTTGCCAAAATCTGGACCAGGTTCATGT
ATATAATGACTTTTTTGTGTTACTCTGCATGATAAACTTGTATATCTCTA
TATCATAGATTTCCAATTGGAATGGACCTAACATCAAGTATCATCTGTTT
ATGCCTGCAACATGAATAAAGATATCCTAGTAATGTAAAATTTTAAAATG
TTTCTAGATTTATATGTTTTCATTTTGTTATAGGTTGAAGAATATTGACT
TCTATTTGTGCTTTCTTATTAGAAGGGTTTGGTTTCACGCATTCCTCTAA
TCATTTAATTATTAAATAAACTAACCTGTGTCTTAGGACCCTGTCCATTT
TGACTATATCTGTGTTCTGACATGATTTAACATTCTACTTAACGTAAGTA
TCTGATCTGGACACAGTTTTTAATCCCTCGACATGTAATATTCATTTTGA
TATTTCTGTTTGTTCACGACTACATGCAATGACTCTTTAATTATCAAACT
TTCCATGTGGTGCATGTGTCTTTTGTTTGCAACGTTTTTAGATTTAGGTG
TTGATTGTTTTGTGTGTACACACTTTACAGGTATATAAATGAGTTGATTG
AGTATATTTTGACTGCTCTTAAAGATGTGAGCATTAAACAGATAGGTCTT
GGTCAATCGCCCAATGTAGAGGGTCATAAAGGTGATCATGTCATTACTGG
AGATCAACATCATGTTGAAGCTGCCACAAATATAGCTACATCTTCTCAAA
GTAAAGGGACTGACATGACACTGTCCAGATATGAAACTGCAAAAGAAAGT
GTATCAGATGGTTCAGAAAATTCCATCACCAACACAAGTCATAATGAGGC
CATGCATCCACGATCTGCTGAATGGGCTAGAGTCCTTGAGGCAGCTACCC
AGAGAAGAACAGAAGTTCTTATGCCTGAAAATCTTGAGAATATGTGGGCA
ATAGGAAGAAATTACAAAAAGAAGGTTCAGAAACTTGCTGCTGCAGGAGG
TCAGTCTCCTCTAATACAGGGGTCAGATTCAAGCAATGCACTGTCTACCA
ATTTGGATAAGGAAATATCAGCTCAGAAGGCTGAAGCATTCACAAGAATG
GAGAATCAACCTTTAACCCCGGCACATTCAAGGCCTCCGATAGATTCTCG
ACCAAGTAATCAAATCAGTAGTGCAACCCTTAATACACCAACTCTGAACA
AAGTAGTATCTCTTAAGGGAAACCGAATTGTAAATGAAAGTGAGAATTCC
ACATCTTCTATTGCTAGTGGAAATAAAAATAAGATGACTAGATCAAATAG
CACCCCGGATTTGAATACTGAACCAGTAATGAAAACTGATTCTATCTGCA
AGAGTGGTGGATCAGTTATATCCGAGTTCTGCGATAAAGATCTTAGCAGC
ACGAGTCAAGCTACTAATGCAAAAAGTGCTCTAAATATGGTTTCATCTAG
TGAGGGACAACAGGCGGTGAAGCTAAGGTGTCGGGTATTTAGCCATTTTT
CCCTTAATTGAACGTGCTTGTAATTTATACTCTTTATTAGACTTTGAGGG
CACCTGGTCACTCTTTATATATAGTACTGAAAATATATTTAGTTATATTA
TATACCATTTCTTCATGTCTTTAATCTATGCCAATATGCCATATGTAAAG
GGAAGTTCCTGATGGTTTTCTGGCCTTCGCAGGTTGTGGGAGCATATTTT
GAAAAACTTGGGTCAAAATCTTTTGCAGTTTATTCAATTGCAGTGACAGA
TATTGATGGAATAACCTGGTTTGTTAAAAGAAGGTACAACACTCATTTTA
CTCTAGTGGGATGTTTATAGATTTTACCTACTTCGGAAGTTGCTTATTTG
TGAATATTGTTTTGATCATTATCTCCTTGCAAAAGTTTCTGAAGCTTGGG
TTGAATTGTTCAGCCCATTATTATGGATCTTTCATCTTTTTTTAATATGT
TTGTTAGATTGTCTGAGCAGATACAGGAATTTTGAGAGATTGCATCGTCA
GCTTAAGGATATTCCCAACTATACTTTACATTTGCCTCCCAAAAGAATAT
TTTCTTCCAGCACCGAGGATGCTTTTGTTCATCAACGCTGCATTCAACTT
GACAAGTATTTGCAAGTATAGTTTTCTCCCTATTCTGCTTATGCAAGATT
TACCCTAATGCGTTGTAATCTTTTGAGTATTTTATATCTACTAGGATCTC
TTGTCAATTGCTAATGTTGCTGAGCAACATGAAGTGTGGGATTTTTTGAG
TGTTTCATCAAAGGTGATATTGCTTCTTCTTCGTTCTATGTTCACCATCA
CATACACTAGAGACACTACTAAGTAAACTAACGCCTTTTATTCGATGTTT
TTTAGAATTATTCTTTCGGAAAATCCCCCTCCATGATGAAATCCCTGGCA
GGTAGTAACCTTTCCGCTTGTGTTTTTTCTATTGCATTGTATGTCTGAAT
TCTTGTGTATGTTTGACTATTAGATGATGAAAACTTTTCCATTTACTCTA
AATCTCTTGTACTTAAAAAACATAATTATATTCAGGTCACTGAGAGCATG
TTTGATGTTAGGAACTTGACTTATTATTTTTTGTTTTATGAATGTTTTTG
CATATGTTTAAGCTATGAACACAGCAGATCAAGGATAAAAATAGATATAG
GCTAATACAGATGAGAAATGAAATTCAGACTCAACAAGCAAAAGAGGTGA
AGGTTAGAGGGAGAAAGTTGTTATAGAGAGAGTGCAGACTGCAGAGAGTT
TAGTGAGAGAGAAGTGGTGGGAAAACATTTCCATTTTTGAATTATAATTC
AAAAGCCAACTGAATTACAAAAGGAATTGGTATTTACAAGTTCCAGCTTC
CACAGCTGTAATGACTAGTTTACCCTTACTAATATTTTTCCCGAGTCATA
AATTCCTCTCCACTCACTTGTATAACCAAGTCTGAGCATTTAGTAGCACT
TTCCAGGGAAGCTCCATTATGTAACCTGAGACTTACATGATCGACCAATT
CCCAAAGACAATTTTGCACTTACCAAGTTGAGAGTGCTGCCTGCATCCAA
GAGTACCCTTGCAGCTTGATAGCTGCAAATACTTTTGAAATGCAAGGGTT
GAGGCCTTGTAGTGGTTTGTGTCTATATAGTTGCCAGAACAAATTCTCCA
CCCTGACCCTCGACTTCTTCATCTTCAATGTACTCATCATTCCTTGGTTC
CTCACAATCTTCACCATCACTTTCTGCAATTATTAGATTGCCCCATGGCT
TCTCACACTATTGTCCTCTATTTGTGAGTAAGTACGAGGTCTGGGCTTAT
AGGAAGTTACTTCTGCTGCCTGGCACTGAATAGGAAGTAAGCTTTAGTGC
TAAAGACTGTTCCAGAAGTGGCCACTGCAGTCTTTGCAGCCTGTTGATAG
GAGTTATTGCTTTTGAAATCACTTCCATAGTTTCCATATTACTTTAGAGT
AGCATTTAGGGTTCCTTCATAGTATCTAGCCAATTTGAGAGCCTGCTCTA
GGGACTGAGGTCCAGCAGTCTTATCATTCCTTTCATATCCAATTCCAACC
CTTCAATGAAATTCTCCTGGAAATACTCTGCAGTCAAACCAGGAATTTTC
TTTAGTAATTGACCCCTACATTGTTTGAAGTTATCATAGTACTCTACGGT
TGTTGTAATCTTTTGAATTCATCAAAGACTAAATCATGTCTAGTTCCCCA
GATTTGGCAATAAAAGCTTCAGAGATATGTTGCCAAATTGCCCTTTCTTG
TCCAATCATGAAGGATTTATACCATGATCTTGGAGTCCATTCAAGTCCAT
GGCTACACAATGGCAGCTCTCTTGCCATCATGCACCTCATAGATTGTGAA
GTATTCCTCACAGTCCCTCAGCCACTCCATGGCATCTGCTCCTTGATAAC
TGGAAATGACAACTTGAGATGCTTTGGATTTCATTTGGTCTATCCTTGTT
AAAACCAGTACTCTTTGTTTCATCTGCAACTTTAACCTGCCTGTGCAATT
GTCTCTGTCTTTTCAGAGCTGCATGTACTGGATTCTATACATTCCTCTAC
CAAAAGACCCTGGAGATACATTCTCCTCGACTCCTTCAATGTCCTCTTTA
TAACTAGCTTCTAGACCTTTCTTCTTTGCATTCTTCTGATTCGATCCTAT
CACTAGCAACTAAATCTGTTGCTGTAGCCTCTCAATCTTCTCATTAGTCC
CCAGTAAGTCTTGCTGTATCGTTCTCAATGTGCCTTGGTGAGAGGCTTCT
GAGACTTCATCACTCTTGTAGTAACTAATTCTTCACTCAATTAATCAAAC
AGATGTAGAGCACTTGTTTACAGACAATCTTCCTGCTCAGGTTTAATCAC
AATCACACCAAGCTTACACCTCAACTGCTCCACACTCCAATATACAACTC
CTTACTTCAATTCTACTGGCAAGTTGCACTACTACAAGTCTCAGATCAGT
TTGGCAAAAAAAATAAGTGTCTCAGATTGACAATCATTCTCCAATTATCA
AACACAGCACAAAAACAAAGTAACACAACACAGAGATTCTCCACCACTAC
AATTCCACTAAAATTGTGATAGAATCCAATTTCAGCAACGGGACACTACT
AGTTACTTGTAAACGACTCTAAATCCCCTGAAACAACTTCAATCATAGCT
AATAGTAACAGAAAAGTAACAGATGTGAGAGTTACAGTGAAGAACAGAGC
ACCTGTACTAAATTCAACATAAACTGAGGTTACTTCTTCGATTTACGAAA
TTCTGGTCTCAGTTGACTCGTTTTAAGCTGAACAATATTTTGATAGTTGA
GGGTGTAGTCATACACTTCTGTTTATAGAAGTCATAACATATCCTTATAA
TTTTCCTCATCAATTAGGCAGTGTCTCTGGATAGTATATTTGTATATTTA
ACAATGCAGTATCGTTCCTGGCTAATGTATTTATTATCAGGCTTTGGGCT
AAGTTCTTTGCTGTACCTGTATTGCCCTAAATTGTTATGTAGTCATAAAA
TGTCAGCAAGATAGTATTGATTAAGAGTGTCTTTAACTCTTTATATATAC
AGTTATGTATAACAAGTGACGTCTATTTATCACTACTGATGTCATGTATA
CTGCGCAGGGATCTGGTTTTGACCATTTTACCAGATTTTTTTTTTAGTGT
AAATGCCATGGTGTTTGATGAGTGTATAAATATATTTGGCTCTTGAAATA
TATTGATGATGTTATGCTCTCTGGTTCATGTCATATACTAGGCTAACTAA
TATGATTGATGACTGACTAAAATACATTTCACTAATTTTATTATGTTTTA
ATATTATTTAACCAGTCAACGTGGATGATGCTATGGATGACATTGTACGC
CAGTTCAAAGGGGTTTCAGATGGATTGATACGGAAAGTCGCTAGTCCAAC
TTCAGTACCTGAACCAGCTTCTTCGGCTTATGGAAGGAATTTATCCTTGA
AAGAAGATGAGATAAACAAGTTAAATCTGAGACGGGATACTGCAGATTCA
ATTAATAGTTTTTCTGATGAGGAGGGTGATAAAAGTACCAACCTTCATGG
TAAGGATTCAGGATATGATATACAAACTAATGGTTGGCATTCAGACAATG
AACTGAACTCAAAGGAATTTCCACCAAGGGTTGTTACACGTAGTGACGAC
TTTAGAAACATCTCTTCTGAGGAAAAAGCGTTTTCTACTCTGCAGTCTGA
ATTGTCAAGTCTCCGTGCTTCTCCCGGGGTGAAATCCCCATTAACTCCTG
GACAACTGGACGATCCAATTGGAGTACCACAAGAGGTATTGTGCATGCTA
ACTAAATTTAATTGTTGGACACGTAGTTGCTTGAATTAATAACCTCATTT
AATTGATTATTGTTTTCATGTTTGAATTTTTGTCCTATTCCATTATGAGT
TCTTATGTTGAGAATGGACTATGGGGCAGGACGATAAAATATTGCAGGAT
GCGACAAATCTGTTCTTTGTTTATTAGACAAGCCAAACAAATATAAATAG
ATGATAACTCTCTTGCTTATTACTAATTTTATTCAGAACATATGTGTACA
TATAATATCCTTAATGCTTCTTTGGTTCTTTTTTGCAGTGGACACCACCA
AATTTAAGTGTACCCCTGTTGAATTTAGTTGATAATGTCTTCCAGTTAAA
GAGAAGAGGCTGGCTAAGGTGAGAGGCTGTTTCTATATATTATAGCAATT
AATATGGTTGTATAACTTCTTTCTTGCTATTTTAAATCTTCTAACATAGC
AAACATGTTATTATGGTATCTGACATGTTTATGATATTCTAAAATATTTG
GCATACCTTTATATTTGAAATTTTTAGTTATAAAGAATCCATTTAGTTAG
GTTCACCTCAAGTTTCTCACTTTTTCCTCCAGATATTTGTAGACAAAGAT
TGATAATGAATATCTGATTTAGGCATCTTCAAGTGAATTATGTAGGTATC
ATGTGAACTGAATACTCCCTTGTCTCAGGGTCAGGAACTTGTTAAAAAAT
GAATTTAGTAATAGCTAAATAGGTGTAATTGTGTGTATGTGAGGGAGGGA
GACCGATGATAATAGCGATGGAGATTTTGGACATACATGATAGTGTGAAC
TCAAATAATTAGTGGATAATAAGAATTTACAGGAGCAGATGATAGACTTC
AATCATATATTGACTTCTCTGAAACATTCTGGAATAACAAAGTCTATGTG
GAGTATTAGGAGACTCCTTTGGCGTCTTGAGGGAGATACTTTGAATAATT
TGCAACTTGTAGTTTAATCTCTACATCATAGTCGACTTGTCCCTTACCAA
GTATTGCAATTAGAAGAACCAAAACATAAATTTTAGGTGAAGTATACTCG
TTAATCCCAATTATCTCTAAAATTGGTCACACTTGCAATAGTATTTGGAA
GACGCGTTTTAAGGCTTCAAAGTGACATATAGGTTTTTTCTTCTAGATGC
ATAGATAATGAAATAGCTTACACTGATTCATTTTTCCGTACCCATCACAC
AATTGTTAACTCCCTTTCTTCAGTTCTTTGCATCTATTAATAGTTTAATT
CTTTGTATGCAATAATGGTTGCCCTATAGTTAATTGATGAATGACAAATT
AATACAGAAGTTGATATTGAATAGAAAATTTTAAATAGATAAACTAGGGT
GATTCTTCTGCAGAAGAATCCCTATCCTAAGGGAGGAAATATTCTGAACA
GACTTAATTCCATATTTATTATTCGAATAATCAAATATTGGATAATGTGG
GGATTACTTCACTTATGCACACTTATAGAGAATAACCTTATGGACCAAGG
CCCATGACAATTCATAAAACCGAAAATACAAAGTCCAGTTCCTACAAACA
TATAAACAAATACACTAATTTTCGTCTACCCTAATATAGACAGGTTAGAT
AGTAGCATATATAAATAACTACCAATTCTCACTTTTGTTCCCCATCATGA
AACCATGTGGATAAGATTGTTTAAGAATACTGTTGGAGATTTAAGATCAT
AAATTAATTTTTTAAGTTGAGAATACGAACCTTGTTACAATCGTTTCTAT
GTAAGACATTTTATTTGAGTTTTTATGGAAGACATGCAATTTTAGACTAA
GAAATGACAATTTTTGTTGTGATCTGTGCTAAAATTTGTGCAGAATAGTA
ATAAACAAGTCCCCAATACTATATACTTGATGGGTTCGGGTCCCTGCCAA
TCAATTGTTGCACCAAACTATCCACAATTTTTTATAGCGGAAAGATATTA
ACCCTAGATTTCTTGTGTGCATGCAGTGGGCCCATGAGCCCATCCGCGCT
TTAGACATCCACTCTAGGGTTTTTTCCTTCCGGCGATAAAAAAGAGCAGA
TAGTTTGTTGCCAACAATCAATTTCTAGGACCATCTCCCGTACTTGATAT
AATACAAGGGTTGAAAAACAAGTGAGAAAACCCGCCTTTACCAAAATTGA
ATTGAAATATAAATAAAGTGTCATGTTCAAGAGAGAACCATTAGAGAAAG
AACCCATAGAACCCTTAACTTATTTCTAGTATTAGTTAGAGTTCTGCAGC
AAAACTTCACATGCAAAATATGTCAATATCTATGTACTATATTTCAAAAT
CATTTTTGAACACACACAACGATGAAAAAACATGGAAAAAACATGTATTT
AGATTTAGATGCTAAAAATCTATTTAAAATTTAGGGTTCTGCAGCGGAAC
CTTAGTGGTTCTCTGGTTCTATTTTAAGGACTGGTTCTCTCTTGAGCGCG
ACCCATAAATAAATCATGTGATTCCTCAAACTATTTATATTGTTGATTCT
TGATATATAACTATCACTATATCTATTCTAGAATAGCACTAAATAGCCAA
CACAAATATCCAATTACAAATACACATATATAAATAACAATATATAATGG
TTAACAACTAAGACAGTTATTTCCTGAAACACATTAGTTGGAACAATATT
CGAGGATGCAATAATAAGTGAGACCATAAAACTGTCCCAACAAGTCTAGT
GTTCAAGTGCATAAGTATCTGACATGGGTACAATGGCAGATGGCTTAGCC
AAAGAGTTCAACTGTTCAAGTAATGAATTGTGGTACATGTATGAATGAGG
TCTTGGCAATTTTATGTTTTGTTTAATTAAGCAAAGTGATCCACGTCTAC
ATATGTCCTTCAGTTCCAAACCGCACACGAAAGATTCCAGTACATTGCTT
GAGACAAAGTAACAAAAGAACGTGCCTTTCTACTAATCCACTAATACAGC
TAAGAGAGTCTCTGTTTTTATCATCTACAGGTATTGTAATTATACTAATA
CAGCTTTACTGGTTATCTACAACAAAGCAGTCATGACTTTTGGCACGGTC
TAACTAATAAATAGTTTAAAAAGCGTGGCACATACTTATTCTGCTTCTGC
AGTATCTGCTTACTCGAACAAGTGTGTCAATGATTTTCTTTTGTTACCTT
CGTTTTATGCTTCTTTGGGTGCTCATAATCTTATGCATCTATAATCAGTG
TTATGCAATATGTGTTGCTTTCCTTTTAGTAAAAAGTCAAACATTTCCGT
ATCTTATACAAGTTACCTGATATTAATTGTAAAAATGAGAATATTTCCTA
ATGCAAATTTTACTAAACATCTGTCATTATGGATAAGATGATCTTAGTTT
GTTTGGATTTTGTTCTTTGTTTTTGTTGATGCAGACGGCAAGTGTTTTGG
ATATCTAAGCAAATACTGCAGCTAATGATGGAAGATGCTATTGATGACTG
GCTCTTGATGCAAATACATTGGCTCCGCAGAGACGATACAATTGCTCAAG
GAATTCGCTGGATCCAGGATGTAAGCTTCTAGTTGTTTTGTAGAGATTTT
GTATTTTTAACGTCATTTGAAAGACTAAAACACTAGATGGACTTATGACA
TCATGTTTATGAGAGTATAACAAATGAAAACCTGTTGGTAATAATCTGCT
GAAATTTGGTTCTCAATTTAAAGACAGGAAAAGGTAAGAGTAATGGAAGT
TATAGGAGTATTATGCTTCAACATGCCAGTATTGCACATTATGAGAGTGA
GTCATTTGAAGAGCGAAACTTGTAAAAGTCTGTGGAAAATTCCTATTTCA
AGTATAATAAGCTCAGTCAACCGACCCTTGTGCAACTATTAGAGTCAACA
CTCAACCATCACCTCCAGACTCACCTGACATGTTGTGACCTGTAGGTACA
GGTTGTATTAGCCTTAAGACCGTATATATAAGTGCTTGTCTCACATGATT
TAGAGAGAGACTGTTGTTACCATACGTGCAGTTGTAGCAGTAATGCTTCA
GCATTCAAGTATTCTACACAATAAAGTTAGCTGAGTTGCTGAAAATTGTT
GAAGTCTAGTACTGTAGTTGCAGACTAGGTTTGAATGGTTGAACAAGGTC
AACATCATTTCTTCAGATAAAATTCACTGTTACAACTGCCAATGGGTAGT
CAAAGCATAAAGGACACCCAAGTGTGTGATGTTTGTGCCCCCCCCCTCCC
CCAAAAACCCACACACGCAAACACTAGTTTAATTAGAGCCGGTCCAACTA
AAAATCCCATGTACTGGCTAGCTTCACATGTTTCATATTTGTAAAATTCC
TGAACGCCAATATATGTTGATACAGCCCACACACTAAACACATGTATGAA
TTCCTTTGTATGCCTTTTCTGAGGTATCATGTTTACTAACAGCAGACTTT
TATTTCAGGTTCTTTGGCCTGGTGGTAAATTCTTCCTGAAACTCAATATT
AGAAGTAAAGCAGATGACAATGAAACTAATGACATATCTTCGCAAAGTAC
AAGCCTTTCAGCCAGCAGCAATACCTCTAAACCAGGTTCGTTTGAGCTCC
AGCTTGAGGCTGCTCGGCGAGCTAGTAATGTCAAGAAAATGATCTTGAGT
GAGTTGCTTTTCCCTCTGATGTTTTAATATTGTAGTTTTTGAACCTTTTT
TTACTGGATTCTTACTACCATGTATGTGCGCATTCATGCGTTCTTGTTTT
CCTAGTAATAGTATATGTCAAGGACCCATTTAGTGGCTTCTCCCAACAAC
ATATGGATTTGTTAGAGTTGGTCCCTTAACAGCATAAAGGTGCAGTGTAC
ATCTCAATACCGAGAGGTCTCGTGGTCCACCTCCCCCCCCCCCCCCAAAA
AAAAAAAAAATCGACAAAAAAAAAAAATCAAATTTTGGCCAAATAAGGCC
CAGTGATCAGTCTTCTATTCAAGAAACGAGCTTTAAGTGCAGGAACTTAA
AGATATTAGGTGTATTTAGTAGCTTATTCCAATACCACAAGTTTTTAAAA
GAGCTGGTCATGTAATGTCAGTAATATCCTTACATCTGGGGCGTGCATCT
CTTTGGCAGTTTAGATCTTAACAGTTAACTTCCACAGTGGCTTTGTAAAC
GATTGATGCTAAAGGAAATTGTTGTTTCTTAACCATTCTAATTGTAACTT
CTTTTAAATAATAATAATAATACTGTTTAAATCTTCAAAGATTTATTTCT
TTTTCTTTGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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GGTAGCATTAGTTTAAATAATTTTGTATGTGCAAGCGGAGATGGTGTGAG
AATTTGAACCATGACTTATCGTGTGGAAAGGTAGGGATGAGCATATGCCA
CTATGATCCAATCCCAGGGTATTTGGAGATTTTTGTTTCCCGCTAGTTAA
ATTATTTATAATCGATTATAATACTACATACTTACATACACTTTTAGTTT
TATGCATGTTTGTTATTATGTTAAATTGAAAATTCTCTCCGGTGCACTAA
TTGAGCTACAACCATGTTAATTGACTTCATATAAAACACAACAGATGTTA
AATAAAAATGAAGTTGAAGAGAATAAAACGATTATCTTTTCCATTGATGC
TCTAAATGCTATCTAAATTCTTTCCTAACAATCCATTTAGTCAGAGCACA
ATAGGTTATAGGTTATATATTATATATGAGGTATTTTGCATAATCAAGAA
ACATTTCTGTAGTGGTCATTCAGAACCTATTTAAAGCGTATCAGATAAGC
CCTTGTGTCCTTGCAGATTTAGTCTGGGTTCAAAACAATATACGTCTCCT
TTAGGAAGTTTACATTATCAGGCAAATGTGTTGATGTCTGCCAAATTACT
GGTCTCACACATTGGTCAATGTTCCTTGATATAAACATAAAACTCGAATT
CGCTGAGTAAGAAAAGTTCTACTTTATCATTTAATTAAAGGACCCTAGAT
ATGATGCTGAACGTGTTGTGTTCCAAGAGCACTATAACGACTGATGACAC
TGATATTAATCCTCATCTTGTCTACGAAGCACGGGATTTTGGCTAAAACG
TACTCTTGGGCAATTTTTTTTTTAAGCTATTTGTAAGTTCGGTGGGGGTG
AACGTGACTATTATACAAATTTTTAGTTTATCCTTATGGTAACAATACAT
AAGCTTGGCGGTGGGTACATGTAGTCTTTATAGCTGATTTAGCATCTTAG
TTTGGTGACAAATGAAGTTCATCCATTTTTTTTTCCCTTAAAATAAAGGT
GGAGCTCCTGCTGCACTAGTCGGCTTAATTGGACACAAACAATACAAGCG
CTGTGCTAGAGACATATTTTATTTCCTCCAGGTAATATAATTCCATAAGC
TGATTTTATTTTTTTTGATATTGGTAGATACACCCACATTTCCTTTGACA
TGATTGAACCCTTAACCTCCCATAAAGAGGATGAGGTTGGCATGGCTAGG
CTAAGCATGTGACTTGGGTGTCAGTTGGCTTCAATTAATTTTGTCTAATA
TATATACGCTTGTCATGCTATGCAGTCTACCATATGTTTGAAGCAAGTAA
CATATGAAATTCTTGAACTTGTGCTTGTATCTATTTTCCCTGAGATGGGT
GACGTCGTTTTGGATATGCATGAAAAAATGCGGACTCAATCTCTTTAAGG
TGGCTGCTTAATCGTCTTGGCACTCCTCATCAGTGGTGTTCTACAGTATA
TTGGGCAACTTGTGTCCTAATTCACACAAATCTCATACCTCTGCATCGTC
ATTGTCCAAGATTGGCAAATCATGGACTTCGCTTCTAGGCAAACTGGCTT
TTCGAGTAGTGTTATGTTTTGTAAACAAAGAGGTAGTATGGTAAATTCTG
ACATTGTTCACGTATACGGGGGCAGTTTATTGACCTCCTCCACCCAACTA
TACAGAGATTGTAACCAGAAATTGTACAGAACTTTTGTTTTGTGTGTTAG
CATTTTCTACATATCAGTAGATATTGTAATTATATTAATCCGCAGTCCAG
CAATATTTATTCAGAGCGACCTTGTGCTTTTGCAGCTCTTAAAA
Sequence Length: 
16644
Sequence Checksum: 
9826c08f9e0a649732fdaec9cf006c10
View location in JBrowse: 
DCARv2_Chr1:40712851..40729494+
Gene: 
LOC108204532
Gene Biotype: 
protein_coding
Gbkey: 
Gene