Resource Type:
Gene
Organism:
Name:
LOC108201292
Identifier:
LOC108201292
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The transcript, XR_001802895.1, is a part of gene, LOC108201292. |
| The genetic_marker, MK005767 K3211, is located in gene, LOC108201292. |
| The genetic_marker, MK016851 1_42903283, is located in gene, LOC108201292. |
| The mRNA, XM_017369585.1, is a part of gene, LOC108201292. |
| The mRNA, XM_017369590.1, is a part of gene, LOC108201292. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017369585.1 | XM_017369585.1 | mRNA | DCARv2_Chr1:42896052..42910054 |
| XM_017369590.1 | XM_017369590.1 | mRNA | DCARv2_Chr1:42896054..42910054 |
Sequence:
ATTATACACAAACGGTCACAGACTATCCATGTAGTATCTAGCACTTCCGA
TTTTCCCAAAAAGAAAAAGAAAAAAAAGATCGATCATCTTGAAATCAAGC
AAAAAAGAATAAACCGAGTCAAACGATTCTTTTTCATTTCAGTGCCGGGT
CAACTCGTTCATTAATGGGGTCATCTTATTTTTCATTCTTTTGAAACCCT
ATCAGACTTGTTTTTCCCCACCTGATTTTAGTTTTCTTGGCTATATTTGT
AGTTTTCTTGAAAAGGGTAGTCTTCTACTTGATTTTTAGTTCTTTATAGG
TGTGAATTTTAGTGAATCTTTGTAAAAAGACAGATTTTATTTAGGAAGAT
GAGTGTGAAGAAGTCTCAGGTTTGGCAGCCTTGTAAAAAGAAGAGATCTT
GATTTTGTGGGCTTTGTTTTGTTTTTAAATATAAACTGAAACAATATATG
CACACACATATATGTACAATTCATGGATGGTATTTGTATAATTCAGACTC
TACAGTTAAAAAAGTCCACTTTTTAGACAAAAAATTGAGGGTAGTTCTTG
AAAGTTTAGGAGGAAAGATTGGATCTTGGAGCTAATTATGGCTAGTTTTT
GAAGTTTGAGCAAAAAAGATTGAATCTTGAAGAGGAATTGTGGTTAGTTT
ATGAAGATTGAGTAAAAAGATAGAATCTTGTAGTGAAATAATGGATGGAA
TCTGTAATATTTGAGGGGTTTGTAAAATTCTGTTGGTAGGGAGTTACTGT
TGAATAGCTGTATGTAGAGAGAGATATCTGAAGATGGCATCAAAATCTTC
GAGCAGTGGTGCTAGTAGCAGTAGTGGTGGCGGGAGGACTAAAGTGGGGA
GGTATGAGTTGGGAAGGACACTAGGGGAGGGGTCATTTGCAAAGGTCAAA
TTTGCCAAGAATTCCGAGACTGGTGAAAATGTGGCTATTAAGATTATTGA
TAAAGAGAAAGTTCTCAAGCATAAAATGATTGGTCAGGTAAACATCCTAA
TGTTTTCCACTTTCTAGTCATGTCTTGCTTATTCTGATTCCATTTTGTTC
AATAGTATAATTCGTGGTTGTTGACTTTTTTCACTGTTTGTGCTGGAACT
TCTTTTGATCATAGCTCTAGTGGAAACTGATATATGATAAAACAACAATG
AGTTGAGTAGGTGAACCATGAATGTATTTTTGTATATCTAGATCTTTGGT
GGTTGGATAGTGTTCTGATTACCTAGATCCTTTGAGCAGTAAGTTAATGT
TCCAGGTCTATAGTTGTGATCAGGAACAAGTTTTACTAAACAAAGAGCGG
TGGTACTTGCAATTTCTTTAAGAAACTCTTTTATCGAATAACTAAGCTGT
ACAAAAAAATCGTGAAGCTAAATTATAATTACATATAACAGATATTAAAA
CTTCCTTCTGTTTTCATGTAAATAATTCCTTTGCCCCTCAGCAGACCAAA
ATATCTAACGATCATAGGTCAAACACATCATCAGAAAAGAAGGGCCTCTT
TGAAAAAGATCTTTAAAGTCCGAATTTGGTTTCTTGGTCTCTTTGTCAAG
TAACTGCTCAAGGCTTGAAGTGACTCATGACTGAATTATGTAAAGGAAGG
AGGTATTTGCTATAAGCTTTCAGTTGGATTTAATGAAAATTTTAATTACC
GTGGCTGCATACGACTTTAGTATTTTGAATTCATTGAACTTATTATAAAA
TACTCAAAGTATTCAAAGTTTAAAGAAATAAAAACCTTTTAGGAACTCTA
AGGTAGGCCCCCCTGCCCTAGACACACTATAAAGACTCAAAATCAGTAAC
TCCTTTCATACAAAGGTGTTACTTATCCTACCTGGTTGTAGATGATATGC
TATGCAGCTCTGCTATAATAAATATCAACTCGACTCTGTTAAAACTGATT
CTATTCTTTGGAGATAAAATTGTAATGACATCCCACAAATTCGTATAGAT
TTTGTGTGCACTTCAATGTTCTAGTTTAGTAATTGATTATATATTCAAAA
ATTATCATGCTGTACTTTATTACTCAAAACTATTATGTATCGATTCTGTT
AACATGTTAAACATGATATATTATTTTTACCAGTTAATTATTTTTTCCCC
ATAATATATGAAGTTACATCTAATGCATTCTTAACTTTTGCAGATTAAAC
GTGAAATTTCCACTATGAAATTAGTCAGACACCCGAATGTTATCCGTATG
CATGAGGTAATAATGTCATATTGGATACATGTATACATATTCAAACTACG
ACTGAATTTCACTTCCACACTGTTCTTATATGTATGTATTTATGTTAGTA
TTGACATAGTATAACTTATTGAACTTTCCTCTCGCAATTGATAAAAGTAA
TTGTGGCTTACCTACATTACAGAGTTATTTCTTTTCTCCTTCTATTTTCA
CCCTGAAGTCATTTTCAAGTATAGATAGAGTTAATTATAAGTTTTTATTA
TCACGAGGGCTGTGATTTAGTTACGTTGGTTCTTTTCTTTAAACTTGAGA
TACTTTTGTGTAGGTTATGGCAAGTAAGACAAAGATATATATTGTCCTGG
AATTTGTTACTGGCGGTGAACTCTTTGACAGAATTGTAAGTTTTTAATAG
CGGGATCCCAACCTTTTCTTAAGCATCTTGTTATGAGATTTACCGTAATG
TCATTATGTTTTATTGTTGATCAAGGCTTCCAAGGGTAGGCTGAAAGAAG
ATGAAGCGAGGAAGTACTTCCAGCATCTCATTAATGCTGTGAACTACTGC
CATAGTCGAGGTGTTTTTCATAGAGATCTTAAGGTTTTTTTTAATGTTTG
TTCGTAATAGTTATTTTGGATCCACTGTTTTATAGGTTTTGGAGTTTGTA
AACTTTAATAGTTATGTCTTGAATTGTCTAATCCGCAGCCAGAAAATCTG
CTGCTGGATGCAAATGGTGTTCTCAAGGTTTCGGATTTTGGTTTGAGTGC
ACTGCCTCAGCAAGTTCGGGTGAGTATTTTGGTTCATTCTGTCCATTTTT
TACCATAATATGCCAAAATATTAAGTGGCACACTATTCTCTTACATGTAC
CTTCTTTGCATTAAAAAAAGTAGCATTTTAAGATGCACAAAATCTACAAG
CATAATTCGTTTCTTGACTTAGCTTCTGTGTCCACTTATTAGGAGGATGG
ATTGCTTCACACAACTTGTGGAACTCCCAACTATGTGGCTCCTGAGGTAT
ATTCTAACATGGGTGCATTAAATAAGTATTGTTTCTTCTTAGTTGTTGTC
TTTTTCTAATTTTTGTTCATCACTTCATAAGGTGATCAATAATAAAGGTT
ATGATGGAGCCAAGGCAGATCTGTGGTCATGCGGTGTAATTCTTTATGTC
CTTATGGCAGGTTATTTGCCTTTCGAAGAAGCCAACCTCATGGTGTTATA
CAAAAAGGTGATTCATGCTCATTTATACATTTGCAAATGTGTGCAAGACC
TATTATTCGCGTTAAATTTTGTTTTCCCATCTTCTCATAAAAGTTACTCC
CTCCGTCCCAGTGAATTGTATACAGTTTCCTTTTTGGGACGTCCCATCAA
TTGTATACATTCCAAAAGTAGTAAACTTTTATAATATAAAATATCATTAC
ACCAACTACTTTCCTCCACTATCTCTATTCTATAATAATATAAACACTAT
TACACCCACTACTTTCCTCCACTATCTTAAATCTATTATTAAATATTAAT
GGGTCCCACCACTCTACCCACTTTTCATTTAACTTTACTCATTTCTTACA
CAATTTATTGGTCTCCGTGTCCCAGCCATTTGTATACAAATGACTGGGAC
GGAGGGAGTAAATGTCTATGTTTATATATTTATTTGTTCTGTGTAAAATA
TATACTTAATTCTTCTTTTGCTATTAATTTAACCATGATCCTTTATACCA
CTTGAAACTGGATAAAGAGTCCATAACTGCATTATATACCACTGCCACTT
TAATTTGAAACCAGAGCAAAACTTCATAATAATTAATAAAGAGCCCTAAT
ATATGCAACAAGGTAGTGCGGGCTCTATTGGTGAAGTTGATGAAGTATAA
ATATATTCACAGCTTACTCGGGGCAGCACTTACATTGAATTGACTGTGGT
GAAGCTAACTGATAAAGTGACTGCAACCTAAAACATGTTAAAGGGAGGAA
CCTATGTTTGGACCCAAACATAAGTGAATTATAAACATGTTGTCACAGAG
TATATCATAAATATTGTTGTCACGGAGCTTGACTAGTCACGGCATTTTCT
AAAGGTCAGCTGGAGGGTTGACCAGCGAATTGTTGATGAACCAGTCGACT
GGGGCAAATAGGTTTCGATTAGTCGAAATTGACTTGTCGACTATTCGATG
GGCTGGTGCAAATCCAGTCCAAATTGAATACAGTTTTAAAGATAAACATA
TATTCTAAAATCCTAATTAACAGCAGCAACAACTTTTTACATATTTATAG
ATTGCTTAAAACTATGGTATATTGTATGTTATATCCTTATAAGGATATGC
TGGGATCCATCTCAGGACATTATTGTGAGATCAGAATTGCGTAATACAAA
GCAACTTACAGCCTGCAAGAACATGGAATTTACACGTACTTTATGTTGTT
AGGAACCAGAGTAGCAGTAGTTTACAGTAGTCTGATAGCCCATATACAGC
AAACCTGTTTGTATTTTCGGTATGCATGATAAAAATATAAGAAAATGGGA
CTTTGTTCCGCCAACTCTTCTCTGCCTTCTCTCTACAGTTTCTCTCTCTA
GAAACTTTTATCTTCTTCTACAATATATCTCTGCATCTCTCTACAACTCT
GTTCTTACTCTATCCCTGTTGAATTCTGCCCTAATCTTTGATATCTACCT
GTTCACTACCACATCTATTTATCTGTTATATTCTATTTCTGCACTTAAAC
CTATAGAAAACTACAAAAACATTTAGAAAACTCATTCAGGAACCTCCAGA
TCCTGACATACATGTATATATATACAGAATATTTGATGAATGAGAATACA
GCTTTTGAGGATACCTTATCAGTTTGTAGACGCCTAGAAGGAATGGAACA
AACAGAGATGTTCTTAATTAGTTTATTTATTTTGTAATCAATGTATACTT
ATGGGAATGTTGAACTTCTGGTGTGTGAAACCACATATATAAGATATATA
TATAACTATATATGATTCTGATAATATAGTTTACGACTAGTTGACAAGCT
GGATCTGCATCGACTGGACGTGACAACCATGATCATAAAGGTCCTTCATG
GATCACATGTCCAAGTAGCATTTACTGGTTTGTCCTGTGTTTCTGGAGTT
GATCTATTTGTATGTTTAACTATATTTTTTGCTCGCAACTACCATTCTAA
TATGAAAACTTTGATTTTTCATTAGTCTATATATATATTTATGACGGTCA
TTGGATTTGACACACACAGATAAATAAAGCAGACTTCTCTTGTCCTCCCT
GGTTCTCTTCAAGTGCAAAGAAATTAATCAAGAGAATCCTGGACCCTAGT
CCAGTAACAGTAAGTTGACGTACATCTCTTCCTCACTCGATTTTTGATGT
ATTTTTATCTCTAATTGGTCAATATATCAAAATCTATAATTTGTCAAAAG
AATAAAAATTTGCAGTTTGAATTCCATGTTACTATGTTCCTAAGTTTACT
AATGAATTAACATGTAATATACTTCTATAACAGCGGATAACTATTCAAGA
GGTTATTGAGAACGAGTGGTTTAAAAAAGGATATCAGCGACCTAAATTTG
AGCAAGAAGATGTCAGTCTTGACGATGTAGATGCCATTTTCGACGAAACA
GGAGTAAGTTTTTTGAGAGTTATTTTTTAATCTACTTTCAAAATCTTCTT
TCCTTAAATGTCATCTATAAACTTCATGCTAGCTGGCCCTTTATAGCAGG
AATCTCCAAATCTCGTCGTGGAAAGGCGGGATGATCGTTCTGCAGCACCT
GTCACTATGAATGCTTTTGAGCTCATTTCCAAATCTCAGGGCCTCAATTT
GAGCTCTCTTTTTGAAAAACAAATGGTACACTCAGACCTCTAGTCTTTGA
ATCTGTGTTCTGCTAGAGTTCTTTTATAATTTTCTTATGCATTAGTGTAA
GCTTTTGTGCCACGGGTATATCACTGATAAATGAGGATGATCTGAAATCC
TATATTTGCCGTAATTATATGGTCCGGACCTTTTAGCCCTCGATTTTTTT
ATTATTTTTTTGAAAACTGATTTGTTTGGAATACGGTTGTGATATCTCAT
AGTTATAGGGCAACTACCATATCATTTTGAAACTGATAACAGTATGTTTC
AGGTAGGAATTGCCATGCATGTCGTTATAGATATTATGTGACTATGCTTT
TGGAATACAATATCTAATATTTCCTTTGTTAAATAGGGGCTCGTTAAACG
AGAAACAAGATTCACATCTAAACGTCCTGCCAGTGAGATAATCTCAAAAA
TAGAGGAAGCTGCTTTGCCCTTGGGTTTTGATGTGAAGAAAAATAACTAC
AAGGTTTAGTATTTATGGCTTCTTATCAAATGTATCTTCATAGACATTAA
AACAATTCCTGTTCCTTTTTATATAAAAATGAAAAAAGGAAAAGGTATCC
CTGTTTTCTTCTGCGGTACTTTTAGTATAGAACTTTTACTCGACCAGTTT
TCCAAATATGCAATTTCTAGCATGGCTACCTACGTCAGCCTGATTTAGAT
AATTGTATGTAATATTGTTTGTGCTCAAGCATTTTCTCAACCTTCTTTGT
AATTGTATCTGTAAGCTATCCTTCTATCCTAATTTGATACTCAATGCCTT
TTGTTCTTCAGCTGAAGTTGCACGGGGAGAAGAGTGGGCATAAGGGTCAC
TTATCTGTTGCAACTGAGGTTGCCTTCCCAAACCATTAAGCATTCTCATC
TTAAAGAGAAATTGTACAGAAACTTATAGTTGTTTTGAAGTTCTTATATA
TGTTAAAATTTTCTCCAGATATTTGAAGTGGCACCGTCTCTTCACATGGT
TGAGGTTCGGAAGGCTGGAGGAGATACTCTAGAATTTCACAAGGTAATCA
ATAAAAGTCTAGTTGCACTCATTGCATCCAGTGTCATGTTTCTCAAGTTG
TCTTAAGAGAGTGCTCTATAGACTACAATATTGTTGCCAAGTTGTCTGAA
CTTTTACAAGTACTTGTCCTCAACTAATATACACAAGCTGCATAATTACG
TTTGCCATTCTTGTGGTCCAACTAACAATGACTATAACAGTATATTTTCT
AAAGTACTCTAATATTCATGTGTCTGACAGTGCTGCTGCAACAACCTTTG
TCTTCTGCTTTTGCATGCATATAATAAAATCACTTCTCTTTCTCTAGTGG
TATAAACGAATAAGCTGATTACTCATGTTGATTTGATGGTAAAAGTGAAG
CTTTATAACAAAGTACAGCAGCTCTATTCTAAAGGTGAATGTACTACATG
ATGTATATAGCCTTAGATAATACTCGACAATTACCAAGTACCACGTACCG
TATAATGTATATATCCTTAGATAGCACACACATCTAGTCACAATAATTTG
TATCTCTGGTGCCATTTAGGGACTTATCGGAGGTGCAACCCAATATAAAA
ATTAAAAGACCTTTAATCTTGTAATATAAGTAACTTTATGGTTAAATTAG
AATTAGGCATTAGCAACAAGTTGCATTTATGCCTTAAGATTTTACAATAC
ATGTAACTTACTAAGTATTGCTTTACATGCTCAATAATTTGCCACTGGCA
TGCAAATATGACCAAAGCTTTCATTTTCCTTCTTTACCTTCTCTTTATGA
TATTGCAGTTGTCCTCATTATTGATAATAGTATTATTTTTCATGTCAACT
CTTTTCAACACCAACTGATAATACTATCATTTTGCACTCAATTGGTCTAG
TAACAATCATAGTTTCACAATTTTTCTCTATATAAGAAACTATATGCCCA
TCTTGCAACATAAAATTTTGAATATTGTAATGACGAAGTGATGCAAACAT
TTGCAATCTTAGATTTTTATCGAGAATAGTCATAAATACACGAATATTTA
AATAACTCGAAGATGGAATAGGTTCCAACATTCAAATTAATTAGCAGTAA
CTGAGATGCATCATAGGAATGGGGATGAAATTGACAAACTGTATGCATCT
TTAAGCTACTAATACTACCAATGCTTTGTAGGAGCAATGTTAAGCATACA
AAGAGAGGATACTCTAGGTAGACTTCATTCATATATTTTATTTTACTATT
GTAGTTTGCAAGCCAGTTTCGACTTGTAGTGCATACCCTGAAAACTGACT
ACAAACTATCCAGAATACATTAAGGAATCTGGAGTTGTTCCTACCCAGAT
TGAAAAAACCTAGACAGACCCGAATTCGATATAAACTTGAAGGAAGAGAC
CAAGTTCGGAAATTTATTTGACGACAATAATAAGTAGTAATTAAAAACTA
ACATAGGCGAGAGGCTTCCCCTAGCATAATGATACAATACAAAACAACCT
TCAGAAGTTTACCCGAGTCCACCGTCGAATGAACTACCCCAGCCTTTCCA
CAAAGACCCGTCATGCTCTGAAAGTGAATCCATAGTGTAGTCAGCTGCCG
CTAAATTGAAAGGCGAATCAAATTGTAAGTCCAAGGGGTTTTCATTGGGA
TTAGAATCAAAGATTGGATCATGTTCTTCACGCTGACCAAACTGTAAATG
TGTTGATGGGAACACAGATTGATTCAAGGGCATGTTTGTTTCTTCAGAAA
TATTACCTTTCATCACTATACCCGGTCCGAAAAGGTTATTATTAAGTTGA
GACATTTGCCGCTGCAGATTATGATCTCCTAGAATGTTAAGATTACCATT
GTTGAGGTTCTGATTGTGGTGAATATGATCTTCAAGCATGTTAAGATTAC
CATTGCTGAGGTTCTGATGGTAAATATGATCTCCAAGAATATTAAGATTA
CCATCACTGAGATTCTGATTCTGGTGAATATGATCTCCTAGAATGTTAAG
ATTACCATTGCCGAGGTTCTGATTCTGGTGAATATGATCTCCTAGAATGT
CAAGAGTATTATTGCCGAGGTTTTGATTCTGGTAAATATGTTTATCGCAG
AAAGACACGAGTTCAGAAATCATCTTCTCCCCGTCGTTCGGAAGGCCAAC
CACAAAATCATTTACAGGAGCTTGATTTTTCACCAATTGGTCAGTTGGAT
TGGGTTGAACAGAAGGCATAGAATAGGCAGCGATATTACCATTGTTGATC
TGAAAGGTTTTTACAGAGAGCCCTCGAGTAGAATGGTCAGTTGGATTGGG
TTGAGCAGAAGGCATAGAAAAGTTTGTGGTATCATCATTGTCGATCTGGA
AGGTTTCTATAGAGAGCCCTTGAGAAGAATCAATTTGGTGTGAGCAACTG
ATCTGGTGATTGTTTCTTAAATTGATGTCATAGAACCCAAATCGATGGTC
ATTATGCGGGCATTGTGGATAAATGCATGTATATACCTTTTTTCCCATGG
CCATGAGCGGTGCATTAGATGGTTGTTTTCTTTTTGGCACAAATTTGATG
ACTCCGTCAACAAGCTCTCCATTAACTGGAGCAACCGGTGGCACTATCAG
CCTATTGTTGGGTCCAGCAGTTCCCAAGTTAAAGAGGTTGGCATCATGAG
GCTGACACTCCTCAATACAAATCTTCTGGATATCTTCCACTCCATCAACA
TTATAATCAGTAGTCTCACATAAGAAATATGACTCGTTGCAACCAATCAC
AGAATTTGAGTGGCCCAAATCAGGGTACGACTTTCGTGATAAAGATTCCT
CCTGATTCATAATTGCCAGCCAAGTAGCAATCTCCTTGGCTGTCATCCTG
TCCTGCAAGCCTTTGGATTGCCGCACAAGCTTGTGGATCTTGGAAATGTT
AGGAGACATGTGCTTGATCACAGCAGTTAAGACACCAACCTTCCAAGCTT
TCTTCAGATCATGAGGCTTCTTATATGGAGGGATTCCTTGGTCTTTAGGG
ATGCATAATTGAGGCCACCATTCCTCATTTCCTGTAGGCCACCATGGTGG
GGCAATGCCTTTCTCCAATGGGAAACGCTTCTGTGGCGGGTCACAGTGCT
GTATTAGAGCAGACAAAATTGAGCCAAGAGTAGTATCCTGAAGCTCTACC
AAAGAGTGGGTGGGGGGAGTTGAGTTGTTATCTTCGTTCTTGCCCAGAAT
GGAATTATCGACTTGGTATTTTGCGATTGCAGCAGGTCCATTCCTGTCAA
ACCTAACTTTATCCTTCCACCATGCACGAAGATTGTCAGAGGCTCCGATG
ACGGGTTTTCCATTCTCGGGAATGATACCGTACACAAAACCCTGAGCTTT
ACATACTTCCATCATTTTCAGCATGTACTTTAGGATTATGTCCTGTGCCC
GAGACATTTTCTTTCTTCGTGCTTTCTCTTGGGACTGACGTGGCTTAGCA
CTATCGAACACCTCCTTGCCTTTCTGTGCTTTAAGCCGTTGCAGGAGTAT
TGCATCTCTCCATATCCTTTTCTCTAGTTCATTGACATCTATTTCTTCGT
GACTGATATCATCATCTCCGGTTTCGTCATGTTCAGATTCTAGTACCACC
CTTCCTTCCCACATAGGGGCTCGAAGGAATTCAAGGTTACCATAGATCAT
CTCTTCGGAATCACCCATAGCATCACTCATAACAATAGAGCAAAGAAAGT
ATCAACTCAATATTTTGATGTGATTGTACCGTCCCCAGATGAGTTGTTCT
TTATATAGTTGGCCTTTTAGCTCTCTGTCGAATGTTATCTGCTTGGCAAT
TTAATGACTTTGACGAATGGAGATCTCTAACTGACACAATTTCCACGCTA
CAATAAATGCAGAGATAAGAGTTATTAAATAATCATACAGATAAGCGTTG
AGCGTTAGCAAGTCGAATTGAATGTGCCCTTGTTCACACTAAAATTAAAA
GCTCGAACTAACTGTCATAATGAGTAGGCAAGTGTCATAGTGAGCAAGTG
TCACTACCAACAAATACAGATGAGCGGATGTATGGGAGTAAATGAGACAT
ATGGTTTGTGAGTTATTTAAGTTCGGATCGTAAAATGTTCGATTTTGGTT
AGACATTAAAGGAGCCGAACTCGAACTCAAGTCTTGAGCTATTTGAATAT
TTTATGAAATCGTGCTTCAAATTACTCGGTTCGTCAGGCTTCTGAGCCTA
ATCGAGCCTATATTTTAATATTTATTAAGTATTATAGATATATTACTATA
TAAATATTTAATGTTTGAATAAATTTTACATAATAAATTGAGTCAAACTA
AGCCGAACTCAAACTTATGGGACTTTTGTCGAACCAAGTTCCAAGCTTGA
AAATTATCGTTCGGTCGAGCTCGAACCCAAACAAATTAGTTGTGCTTAAA
ATCGAGCCTTACAATGTTTGACTGGGCTCGACTCGTTACACCGCTAGGCA
ATTAAGAATCATTTATGTGTTACTAATTTGTTGAGATGAAAATAACCACC
TACCCAAAGTATTGACAAATACAATTAAGGCCCCATTTGTTTTCTTCTGA
ACGACTGCTTAATGAGCTTAATTGAATGATTCAGGCGATTCATTTCATTT
GATAACGTTTTATCTTAGAGCTGAGCGAATAATACATAGCTGAGCCATTC
CTTCTTCAAATTTTAAATTATTAGTTCAACAGTCACTCTAATCTACGGCC
AGCTGCTTTTGCAGTCGTGTATATCATTGTGTGAAAAAATTATTAACTTA
TGAATTAGCTATTTTATAGATAAAATTTGCTAGAAGTCATTAAAATTATT
TTTTCATTATTTTTTAATTTATTCGATAAAATCTTTTTATAATACTTTTC
TTAAAATTTATGCAATAATTAACATATCTATCTAATAGCATAACAATAAT
AGTTGAGGGACATTTATCCATGCTCAAATAAATTTGTTATATTTAAAGAA
TAAAACTGAGAAAAAACACCATTCAGACACCATTAAAATTTATATGCCAA
ACAATATTTATTATTCATCATTCAGATATTTTATTGATTCAGATATATTA
ATCAATCAGATATAACTCATTCAGATTTGCCAAATGACCCCTAAGGCCCT
AAGTAGATAAGAATGTCATAATGAACGTAGATTTTACTTTGTGTCGTCAA
TGAAAAAAAAAAGAAATTGAGGAATCATTGTGTTAGTTTGTCGAGATGAA
ATTAAAAAATTATCCACCAACCAAAAGTATTGGCAAACAACAGTTGAATT
GATAAGCATGTCGTAATGAACATTGTATTAAATTAACGTCACCAACGAAA
AATAAAAGAAACAGAATGGCTCGCCTTAGTTATTAAGAATTGGTAGAAGA
AGATCAAATATACATCACTGTTGCTAAAACAAACTTAAAACACGTGAATA
GATTTTTTATTTAAAAGAAAAAGACGGGGAAAGAAAAGGAAACAAAAATT
TAAGTAAAATATTAAGCAAAATATATACATATAGTTAAGTCTTTTGACAT
AGCTAAAACTAAAAAAGGAGTTGTCTATCTAGGGCGATCGGTTTACATCT
ACATCTTTCCCCATAGCCCTGGGGCTGTATTTCGATCTTCTATTTGCAAA
ATCTAAGGGACTCCGTTTCTATGGAGATTCTCCTTGGTCTAATTCCATGC
CTTACGACGAACGGGGAGTTGGCGTAGTGTAAAGTGAATATTGGGGGAAG
TAGAGCCAAATTCCCTTCTTAGGTATTCCAAAGGTGTAACCTAGGCAACG
AATAAGGGGAAGCTGTTTCTAGTTCTACATTTGTATTTTGCTTTTTCTCT
ACTAATTCATTACTTTTATATCTAGGTCTACCATTAGGCACCTCTTCTTA
TTAAGACCGTAGAATGTTCCTGCAAATTATGCGCAAAGCTACGCATAACT
TCAACCAGTGGTACTTATTTGTAATGTATGAAAATGCTTTTATTATGAAA
GATTAATGGTTTTGTAAGTGTTGTTCTGAAAGATTTTTGAATGTATTCAG
CTAGAATCTAAGTTGAAAGATCTTTGCTGGACTTGACAGTGGATTCTGGT
TGCTTCTTGTCAGCTCTATACATCGCTTAAATTTCTTTAGTAGTTCCCCG
TCCTATTTATCACATCTTTTATCTTATACCATTCCAGTCCCATGCGGCCA
TGCCCCATGCATATTGTATTGGTTCTTCTGTGTGCTTTCACATGTGTATG
TGCTGTATCTCATTTTAAACCTGCATTTCTATGTATGTTAACTTGGTTGT
TTTGCGATGAATGAACAGTTCTACAAAAACCTCTCAGTTGGATTAAATGA
TATTATTTGGAAAACTGGAGAGGAGGCATAAGGATATTCCAATCTCTAGT
AAGTTCTAGTAACACCTAATTATTACTGCAAAAATTGTTCTAGTGTTGCA
TTGTATAATTGTTCTGAGAATGTTTTTAGAGCTTATTTTGTAGCCCGTAA
GTTTGGAAAAAACAATTTACCATGAAATTCGATTTTAAAGGTTCTCATAT
CTTGAACATGTGGTCCCTTTTAGGTAATTAACAAGCCAAGTTTGGTCTAA
AGTTTACATGCCCTAATACTTTTTATTTAAGAATTTTTTATATATGCAGC
GATTGAATTTAAAAGGCAAAATAGTACCTTCCAACATACATATACGCGGC
CTCAAATTTTGTGAGCGCAAAATGGACTCTTGGCTGATTATGAAATGTAT
CTGTTCTTAAAATGCCAAATATGCTGAATCACTCTATTTTTACTGGTGCA
GGTGTTAACACTGGATTCATTTATCAGGCCAATTTTAGCCGAAATAGTAT
GGAAATTGTATAACAAGTGTTATTGTATTTTGATTGCGAGTATGATGCAA
GTACTTGTACAAGGTATACACAAGTTGATGTTCCTTAAATATATATGTTT
TATGATCTGAAATATTAGAAGTCTCTAGGTATTGAAGAACTGGGATGCAT
GTAACTAGATGGATTACACTTCAATAAATATCAATATGTTTTTGATAGAC
CTA
Sequence Length:
14003
Sequence Checksum:
b43e9aaa0f32f8435a0103dcbc9497d5
View location in JBrowse:
Gene:
LOC108201292
Gene Biotype:
protein_coding
Gbkey:
Gene