LOC108207637

Resource Type: 
Gene
Name: 
LOC108207637
Identifier: 
LOC108207637
Cross Reference: 
NCBI GeneLoading content
Relationship: 
There are 3 relationships.
Relationships
The mRNA, XM_017378072.1, is a part of gene, LOC108207637.
The genetic_marker, MK009487 2_29598832, is located in gene, LOC108207637.
The genetic_marker, MK009488 2_29598863, is located in gene, LOC108207637.
Loading content
Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.

Loading content
Transcripts: 
Transcript NameIdentifierTypeLocation
XM_017378072.1XM_017378072.1mRNADCARv2_Chr2:29595089..29613663
Sequence: 
ATGGTTGAGATTTGCTGGGAATTGAAGAAGGATGATCAAAATAATTTTGA
GAATGGAGAAAGAGAGTTTAGAAATATGAGGCGATTTGAGCGCGAGAGTG
TAGGGCCGATCGCTTATTGTTTTTATTTCTTTTATCATTGCATCTGACGT
CACATAATACCGTTAACCTACTGTGTTAACTTGTGTTAACTTGAATATAA
CGTGTAACGGACGGAAACTTAATGAATTTTGGACTTTAATAATATACTCC
TCTGTTTACTTGAATATGACTTTAACTTGAATATTTATAATTATTATTAT
TATTATTTTAATCATTTTATTGTTATTATTTTAATTAAAACTAGTTGAGA
AGCCGCGCGTTGCGGCGGCCTATAAAAATTATATTAATGATTCAATATTA
ATATTTGTAGAATAAATAATTTTGTGGCTGTCGATAAAAAGTATATTAAT
AATTCAAAATTAATATTTATAGGATAAAATAAATTTTATATTATAAAAAT
CTTGATGTAATACCAAGACTAATATGTAAAATTGCAAAAGTGGACTATAA
TTCATGGTGAAAAATGAAAATAAATTTCTACATATAATTAATAATTTAAA
GCACGACGAATCTTAATTTTATTTTTGTTTTTTTTTAAGTAATCATGTTC
TTACATTGTCACCTTCTTCCAATTTTTTTGGATTGATTGTGCACAAAATC
ATCCAACTTAAATCCGTGAAATAGCGGTCTATAACTGCCCTTACTTGTAA
CAATATTTGCCTTCACTTAAAAGTTGCTTGAACGAAACAAACAGATAATT
CATGAATAATTTTTTCCTGTGTAAATCATATAAAAATTAACAACAAACGT
GTCCAATGAACAAAACAAATATTATAAAAAAATAACCAACAAACATACAT
CACTAGTAGTTAATATATTGATATCATCCATCAATGTCATGTCACGACTA
TATTCTTCTCCGTGTTTGGATCTGTCGACTCCCACGGTATATAACTAACT
TTGCTTGCAATAACCTTATATCCGAAACTAAAAAAAGTAGTTCTAATTTT
TGATATTTTTCATCCAAAAATTCAAGAAAAATAGAACGGAACGATGTGAG
AGGCGCCACCTACACGCCCATCGCTTCTCCTTGTAAAGTATATTGATTGA
TTTTAACCCACATTTTTTGAATTCATTTCATTTTTATATCATGTGTTCCC
TGCTATCTTTATCCCAGAAATTTTAAATTTATTCGTATTTAATCAATATT
ACCTAGTACTTTCTTCTTGTCCATAAAACTTATATATAATTTTTGATTCT
ATTATGCCCTATTCTATCACAAGTGAGCGCAACCTTAAAGTTTGATTGTT
GGACCGCATTAAAGATAAAAAATGTCCCCAAATATCATTTCATACGCAAT
TTCGTGTTGTTTTTATAATATCGGATAAAAATTTGAAATAGTCCTGAGTT
GTGTTTTTTATCAGAGAATCAAAATACTAACACCAAGTTGAGTTTGAAGT
AACATTCAGGATCTTTTCAAAAAACGACACTAACACCCATTCATTATACA
AATTTATATAGAGCTATTAATAAAAAAATTCAACTAATTTATCAATTTTT
TGCCAAAAATCCTTTAAATTTTTCTTTTCACTAACAACCCCAATAAAATT
TATTAAAATGATTTAAAAAATTACAAATAGATCATGTTGTCTAAGTGTCT
GACATTCGCAAGTCATATATATATATATATATATTTAGTTAAAATAATTG
GCGGTGTGTGATTTATATATATGATGTTTGTTAGATCTGATTTAAAAATA
AACACGAAAACAAATAAAAATGTGTTTGTCTGGTGTCTCATTTTTTTCAT
TATATTAGTTCGAGCTACTATAATTTGTCAAGTAATTCCACTTTATAAAA
ACGCATTCATATTAACAAGTTTTGACTAAAACTAACCGATCACATTGATA
AGTGATCAATTATTCACGAGCTCAAGAAAATCTTGAAAATATAAAAGATG
AACTAATTATATGTGATATAAACAAACTACTAAAAATTATGAAATTTATT
TTTGAAAATACACAAAGTCATATTTAAAATAATCGTGTTAAAAGTATAAG
TAAATAATTAATTAAACCTCACTTTTTTATGAAAAATACTTCATCCTTCT
CAAAATAGTCGTTTTGACTTTTTATACGCAACTAAGATGCAAAAACCTAT
CATCTTTAAAATTTTAATTTTCTGAATATATTTAATATTTTATTATTTGA
AAAAAATAAAAACATGAAAAAATGTATACAAGTATACTCCCTCCTTAATT
ATTTATGTTTGGGATGTATGGCTCGAGATTTTAAAACTCATATATAGTTT
CATAAATTACTTTTTAACATTTCTCAATTAAAAATTAAATATTAATTTTT
TTAACTAAACAAAAGTGATAAATAAATGTGATGTTTGTTTGCGAGAAGCA
AAAAATATTTTATGTAAATAAGTAACTAAGAAGTCTCTTTTAATAATCCA
AACGGCCCTAGAGACGGTGCAAGTAAGGAGTACGTGGCACCAAAATTCAA
GATAAGCCGAAACGTAAACAAAGAAAACAGAGGCCTGAGCTGGCACTAGG
GGGTGTACGTGGGCCGGGTTGGCCCGGTTTTGGTTTTTTATCGACCCAAC
CCATTAAATTCGGTTTGCTAATTTTCGAACCCAACCCATTAAAATTAATT
TATAACCCAACCCAATTTGTCATACTTCGGGTTGAGTTGGTTTGGGTCGG
GTTGACGGGTTACTAACTACTAAATCGTTGTTTTAAAATTGGTACGCAAC
CTATAAATTATAGAGCATTAAAACAAGTTCGGATTTTTAAAGAATAATAG
CTTCACTATTGAACTCTCAAAGGCAAGTAGACAAATGACAAAGGTGCAGG
GAAAATATTTTAAAGGAAACTCGAGGAAAGATACCAATGTTATAATTCAA
TTTTATCACACTAATGTTATAATTTTAATTGGGTAGTTATATTATATATA
TATACAATTTTGTTAGATATATATATATTATCTATATAATGTATTTTTAT
TAAAATACCCTCGGGTCGGGTTGGGTTGGGTTGACCAAATAAAATCTAAA
ACCATGTCCAACCCATTAAAATCGGGTTGGAGCCGATTCAACCAAATTAA
AAAACGGTTTAAAATTTTCGGTTTGGTTCGGCCGAAAATAGNCGGGTCGG
GTTGGGTTGGGTTGACCAAATAAAATCTAAAACCATGTCCAACCCATTAA
AATCGGGTTGGAGCCGATTCAACCAAATTAAAAAACGGTTTAAAATTTTC
GGTTTGGTTCGGCCGAAAATAGGGTCGGTTTGGGTCGGTTTAAACGGTTT
GGGCAACCCATGTACACCCCTAGCTGGCACTAAAGTCATAGAAGAGGTTC
CACACCACCCCATGTGCCCACAGTTCCAGTACAGGAGGATAACACAAGCG
CAACACTTTACTTTTGTATCTTCGCATGTTAACTCGTTCAAACTTACATT
TCATTTCTAGACTCGCATCTCCCTCGCTCACCATTTCTTTATTTCATTCC
ATAAAATTCTAAATCTATAGCATCTATCACTACTACTACTCACATACTCA
GATTTGCTAAATATTTTCTAGCTTATAATCATGGAAAATAAAAACTTCAA
AACCTGTTTTCCTTTCGTAGTGTCTCTCCTCATCCTCATCGCCGTAGTCT
CGCCGCTGCCTGCTGCCGCCTACACTAACCACACTGTCGGCGCCGCCGCC
GGTTGGTTCTTTAATGCGGACACTGCCACTCCTGCTGCTAAATACTCGGA
CTGGGCAGCTACTCAGACATTCAATCTCGGTGATTACCTCAGTAAGTTCT
CATCCTTGTAATTAATTTGTAATTAACATTTAATTGTGATTATTGTCCGT
GGAACTTGACTCGAGCTCTTTGGCTTGCAAAGATGGACTCGATTTTTGTG
ATTTGTTTATATTGAACTAAATTTGGATCAAATTATTTCTATTTGTTTTT
TATATGTTAATGAATGTTTAAATTGATTAATGTAGTTTATTACAAGTTAT
TTTTTAGAGCCATTGCAAATTGCAAAAGACGGCTATGCCTTCCCTAATGG
TTGATATAATGTTGGGGGTTATATTCTGTAGATGATCTGTAGCATCTATG
TTGTGCTAGTACTTGGTTAATATGTAGTATCGATTAATCTGAATTCGATG
TGCCAGTAATAGTTATCGGTGCTAAATTGTCTTGTACAAGTATTTTTCTT
AGCTGATGACATAGCTTTGTTTAACCCCTCCTTTTTGCCCCCCTCTGATC
TAGATGCACATAGTGATGTTGCAGCTCGTTATTCCTTTGGCCTAGATGAA
CATATACATAAGTTGCGATTAGAATCGTGAAACAACCCCCTTTATGTAAA
ACAAGGGCAAAGTTGGGGACGTGATCTATATCATCTTGTTAGGGTCATAG
AAAATTAGAAACAATCCCTAGATGCAGATAGGAATACAGTGGTGCCCAAC
CTAGATGCACATAACTCACACTAAGATTCATTCAAATTTGAGTGTCTTAT
TTACAGGTGAGACTGACTATTGAATGTTACTCCCTGAATTACCTTTCAAA
CTTTAGGCGCTGTGGAACTTTGATCAATGAATGCAAATATGCCTTTTTTC
ATTACACTCGCTTTAAATACAGGACTAACTTCATATCATTTTGTTCTTGC
AGTATTCAAGACGAGTACAAACCAAAGTGTGATCCAAACTTATAACGAAA
CTACCTACAAAAACTGTAGTATCGACTACTCAGAAGACGATGACACCTTC
TCATTTACAAGTGGCAACAGCGAGTTCAACCAATCACTCACCATAGCTAT
CCCATTAACCATTAACGGTACAAACTATTACTTCTCTGATTCAGATGATG
GTGTACAATGCCAACAAGGCATGGCGTTCGAGATTGATGTAAAATATGGC
AGCGGACTTCCACCAAGCCTCAACCAGCCTCCGCCACCGGCCTATGTGGA
GCCATCACCACCGTTGCCAGACGTGACCACTCCACCGCCCAGTACCGGTT
TCAGGACTAACCTGCCTTGGTTGGTTAGTGTTATTACATTATGTGGAATG
GTAGTGTTATAGAATGAGTATTAGAACCAAAGTGTATTGTACACTAGAAG
ACATCATTTGGAAAAGTAATTATGCGAGTAGTAAGGGTCGTTTTGGGGAT
TTAGATACAAAAATTAGTTGTCAAGCATGTGTCGGCAGAAGGGAGTGTGG
GACTTAGCTGTACTGTTTGGCTTTAGATTATACTACTGCTGCTACTTTTC
TTGAATTAAATTGTTGCATTAATTACACATCCGTCTAAACTTCTAAACCT
ATTACTCCCTCCGTCCCACCCATTTGTTAACGAATGGGTTGGGTACGGAG
GTTAAGAAACATGTATAAAGTAGTGGAAAAAAGGAAGAAAAATGGGTAAA
GTGGTGGGACTCATTGATTTTTAATGTATAAAAAGAAGATAATGGAGTAA
AAGTAGTGTGAAAAGGAAAGAAAAGTGGAGAAGTGGTGGGATCCATTGAC
TATTTTTGATAAGTTTTGAAATGTAAAGAATTGGGTGGGACACCCAAAAA
GGAAAGTGTAAAGAAATGGATGGGACGGAGGGAGTATGTTCATTAGTCAT
TGTAAACATTTACTGACTAAACCTTTACTTAGATAACGGTTTTCTAGTGT
GTGCCAATGGGCACAAAATTTGATAGTTTTTTTATGTTTTGATTGACTTA
CACTACTTTAATAATGATGGCCCCCTGCATTTACACCAAACACACCAATG
AAAACACATCAAATTTATGAATCCAATGAAAACACATCAAATTTATGAAT
TTCTGTGATTAGCATATGTACATGAGCACACACTAGACAAACCCTTTAGA
TAAATGTGTGTTTAGCTTAATTTAGAAAAAAAATTACTATTGATTATTTA
TAAATAGAAATTATAAAATAATTTTTAATTTATGAGTTTGAGTATGCTTA
TAGTAACTTATAATTTTTTTAGGCTGAAATTTTAAATTTAAATATTATAA
ATTATATTAAAATTGACATATACATATAAGAGTATATAAATAAAATTAAA
ATAAGTCGATAAAAAATTAGAATGTTCAACTTTCAAATTTCAACTTTAAA
GTTAGACGCATAAATGATGCGAATAAATTAATTATAATTTATTTTAGTCA
AGAAGTCGAGCAAAATAAGTTGTGCACCCCACAATTTCATGAACGTGTTA
ATTAACTCAAATTTTCTTATAAATTTTCATTAATACATTGATGCTAATGA
ACACCAACTCATGGTACTCGAATATCTAATTCTAATTCTTTCGATAGGTA
ATAATACAAAAAAGGCTTAAACATTTATTGTATTTAATATCACAAATTTT
TTAAGATCAAAAGTGCATTTTAGTAATGGGTCACACGGACACGGAGAGAC
AATTAAAAGCAAATATTTGACACTTCCTGTCACAAGTCATAACTCATAAC
ATAGATATGGTGTGATATTTCCGTATAATATTTTAAACCTTTTCCATTCT
AGTTCAATTAATTTCTTTCTAAAATAGAAAGATAATCCAAATAAAAAGGA
GGAAAAACTTTTCCTACCAAGCAAGTTATATAGGATTTTTGGAAGTCTGG
AAACAAAACCTATATTTAGCTAATTTGCAATTAGATACTTACTAGCAAGA
CTTTAATATCTTTGCGTAAGAAGCTGGTTGCATCGGGGGTTTTTCTGGAA
GAGAAAAAAAATATATTTCTTTATATATAAGTTTTTCTACAAAATATTTC
CTCGCCTTCTCAATCTCTTGTTCGGACCCAAATTCTGTACAGTATATTTC
CATCAGTTTAACTAGTTGAGAAACCGCGCGTTGCGGCGGCCTATAAAAAT
TATATTAATGATTCAATATTAATATTTGTATATAAAATAATTTTGTGACT
GTCTATAAAATGTATATTAATGTTTCAAAATTAATATTTGTAGGATAAAA
TAAATTTTCTTTTATGAAAATCTTGATGTAATGCCAATACTAATATATAA
AATTGCAAAATTGGACAATAATTCATGGTGAAAAAATAAAAAGAAATTTA
TGCACGTAATTAACAATTTAAAACACGACGAATCTTAATTTTATTTGTGT
GTTTTTTAAAAGTAATCATGTTGTTACATTGTCACCTTCCTCCAATTTTT
TTGATTGATTGTGCACAAAAACATCTAACTTAAATCCGTGAGATAGCGGT
CTATAACTACTCTTACTTGTAACAATCTTTATTTTTTAATACTGTATAAA
CAGTCTTCACTCTTGAACGGAGCAAACAGATTATACATGAATAATTTTTT
CCTATATACAAAGTAAATCATATAAAAATTAACAACAACAAACATGTCCG
ATGAACAAAACAAATATTATTATAAAATAATAGCGAACAAACATGCATCA
CTAATAGTTAATTTATTGATATCATATATCAATACCATGTCAAGACTATA
TTCTTTTCCCATGTTTGGATTTGTCGACTCCCACGTAGCGGTCTATAACT
ACCTTTGCTTGCAACAACCTTTATTTTTAATACTGTATAAACAGCCTTCA
CTTATCGAAGAACGGCACCACCGAGTTAGAAATCGAGCAAGAGAACTATT
ACCACACAAAGAGGTAGGGTTGTGGTATTGAAAAAGAGGAGGTTGTGTTT
AGATATCCAAAACCCTACAATCTATAGGGGTATTTATAGGTGCAGAGAGA
CTTGTGTGCTACTCTTTCTCATAATTAAATAATCTGAAACAAAATCAGAT
TAAAACTTTCAAGCTACTGTATTCCATAAATAAACTGAAACAAAATCAGA
TTTCGAAACTTGTTTCTAATATACCCGAAACTAAAAAAGGTAGTTCTGAT
TTTTGATATTTTTCATCCAAAAAAATTCCAGAAAATTAGAAAATAGAACG
GAGCGATGTGAGAGGCGCCACCTACACACCCAGAGAGAGGTACGGTTGTG
GTATTGAAAGAGAAGAGTTTGTGTTTAGATGATCCAAAAACCTATCATCT
ATAGAGGTATTTATATGTGCAGAGAGACTTGTGTGCTACTCATTCTCATA
ATTAAATAATCTGAAACAAAATCAGATTAAAATTTTCAAGCTACTATATT
CCATAAATAATCTGAAACAAAATCAGATTCTGAAACTTGCTTCCAATATA
CCCGAAACTAAGAAAGGTAGTTTTAATTTTTGATATTTTTCATTCAAAAA
TTCCAGAAAATTAGAAAAATAAAACGGAGCGATGTGAGATGCGCCACCTA
CACGCCCCTCGCTTCTCCTTTATATAAGTATATTGATTTGGGTTCGATTT
GGTATTTGTGGAACCCGTTTCGACTGACCCATTGATTACGCACAATTTTA
GGAATCTTAGGACATCTGATTGGTCTAAAATAAATATGGAATATTATATG
ACATGGCAAAATTTAAAATAGATGCCATTGACTTGGACTTTTTTTTGAAA
TATGTGACATTGATGATTTGGCATTGTTCAGGATTTATAATATAGTTTGG
ATTCTATTTTGGAATTTGCGAAACCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATATATATATATATATA
TATATATATATATATATATATATATATATATGTAAATATCACTGGTGAAG
TTCCTGTTCAGTTCTAGAATGAAGCCTCTTGTTATTGCTATATTGTTAAT
TGTCATGCCTTACTCAAAGATTTGGTCTTGCAGCCATACTCTCAGCGGCT
GAATTAGTATTTCAGGAATTGGTTTTGTTGTTCATTATACCTTAATATTC
AGGACTGGACTAAACTTTTAAATATTTAAAAGACTCCTTGCCACATGTAT
ATATAATGTCTTAAATTAGAAATTAGGATCTTTATTCTAAACAAAAAAGT
TTTCGAGATAAAAATGATATTAAGAATGTGGTAGAAAGAATTTAATTTGA
CCTCCGGCGCCATCAAATCGATTGTAGCCTTGGTTGTGACTGTTATTCTT
GCTCCAACATGACTGCTAACTGTTTTAGACTAATAATGGGTTTGTTGATA
AAGCAGCAACATATAGTTGCTACTCTACTTCTTCCTGTTTACTTCTCAGC
TTTAACTATCATAAAATGTGGTTGATATCAGTTGCGGATCCTCTTATTGT
ATATTTTGTTCCCTCAGGCAGTTGACATTAAGCTCCTTGGATCCCTCAGT
AGAGATGATTTGAAGAAAATTTGTGGAGAGAACTTTCCCGAGTGGATATC
ATTTCCTGTTTATGAGCAGGTTAGTTTACCTGCTGTTTGTCATGGGTTTT
CTATTGCAATCATTTATTAGTGTCTTGTTAAACGTGTTTTACTGCATCTT
AGTTAATTTAGTAGCTCAAGGATAAGTCTCAAGTACAAGTGGATAGTTAA
TTGTGGTTATGTTAGCTGATGACCCACCTGACCTGGGTTATTGGCATTTC
GTCCTGTTTACAATAACGTAGGCATGGTAGCCATATAAATACCTAACATT
CTTGCAAGCATGTCTTGCTCAAGGATTTTGAATTAAGGCTATTTTTAAAA
TATTGATCAGGCAAGCTTCCTCATGAACCTGAGTTATGGGTGTTTTGTCA
TGTATCAGTCAAGGGATAGAAAATTATTTGTGTTAATATATTTGGCATAT
ACATTTTTTATTAACCTGATATGCATGTGCATGTTTAGAAGTGTATCATT
GTGATAAATGGTCTAATTAGCAATTACAATATTATGTAATCAATATATGG
ATCATTTATTTTATATATAATAATTTATATTGTGAGATTATATATATACT
GTTAGGAGTTGATTTGATTGTTTATAATATATGATCCTAAAAAATATTGG
CAAGTGGTTAGGTGAAACTCTGTTAGATGAAATAGTTGTGGTACTGTGTA
ATATTACTAAGTTGTTTTTGACATGTGCACGAACTGGATATTATCTGTTG
TGGCAAAATAATACTCCCTCCGTCCCTCCCATTTGTTTACAAATAGGTTG
TGCACGGAGATTAAGAAAAATGTATAAAGTTGTGGGAAAGAGAAACAAAT
AGGCAAAGTGGTGGGACTGATTGATATATGATGTATAAAGTGAGGATAGT
GGAGGCAAGTAGTGGATGTAGTTAGTTTTTATATTCTAGAATGTTACTAT
TATTAGGAAGTTTTGAAATGTAAAGAGTCGGAAAAGACATCTTAAAAAGG
AAAGTATAAAGAAATGGTTGGGATAGAGGGAGTATATGGGTAGAACTGAC
TTTTCACTAAATTAATTGCCCAAAACTTAGTCAAATGGGGTGTTAAACCC
CAATTATGTTTAATGTATGCATTATATATTTTTTCGGAATTATACTATTT
GTAAAGTCTTAACTTTTAAATTCTACCCCTGGGTCAATCCAGAGCCTTTT
CCGAAATCGGGTCAGTTACTGATTTATTTACACATAAGCAAAAAATACAT
TAGGCCAATTGCAGCCTTGGTCAAATTATGAATCTTTAAAAATCAGCTCT
TCCCGAATCCGAATCACGCATAGGTACGAAGTACACTTGCCCAAATGCAA
CTTGGGTAATCCACAAGCTCACTACAAGCCCTAAAAAGAACATGGTTTGT
TGGTGCACTTGGAAGTGATACTTTAATATGAGTAATTTTAATTATCTTAC
TAGTTTTGATATAATTTCATTTTTGTTTGAGATTTCAGGTAAAATGGTTG
AACAAGCAACTGAGCAAACTCTGGCCATTTGTTGCAGATGTAAGATTGTC
CCTATCCTGTCTTTCAAATTATACACTATGAAGTTAAAAAGTAAGATGCA
TTATATTCATAGAGCTATGTCTTAGCCTCGTAGGTAATACATTGTCAGTT
ATTGTTGTGTTTACTTGTTCTTTGGTATTTTGGTATCCTTCTACAAAACT
TTCCTGACTCACCCAGGAAGTTTGATGCATCTTTGTCTTCAAGGACTTTT
TATAATGTTTGTTAATTATTTATAGTTATGTAGTGATCTTCAAAATTTGT
TTCCTACATCCACAATGACATAGTGACACCTTCACACTTTATTGAATCCC
ACTTAACTGTTAAAACAATTACGTGGGATGCTTATAAGGCTGTAAATTTT
TTTATTGCAAGTTTTAGAGAAATTGGTTTCAAGGAAAATTTATTTTCCCT
ACAAAGTCCCACTCTGTAGGAGGATTTATACTTTTGCATGCATGTGGAAT
CTTTAGATTCTGCAGAATGCTGCCAGTGCAAATTGGCCATATCATTGATA
AGTAATAATTACAAGACATTAACATCATTCTTTCAGTTTTGTTTAGTTTG
GAAGATGTTGTTTTTCCTATCTCACCAGGCTAAATTTTGTTGGATGTGCT
TATTTGCAGGCAGCAACGGCAATAATAAAAGAATCTGTTGAACCTTTGTT
AGAGGAATACCGACCAGCAGGAATTACGTCAATGAAGTTCAGTAAACTGT
CCCTTGGAAATGTGCCTCCTAAGATTGAAGGTAAGATCACATGCTGAACT
CTAACTTGCTTCATATGCTCTTTGCTTCTTTGGGTCACTGAAGTAATACC
TAATAATTTTTAGTGTCAACAAAACTAGTTTCAGTTTCACTTTCACATAT
ATTTTGCCAGTATGGGATGACATGGTTGAAGCTGGTTGCCATATAATAAT
TGATGTTTAAAAGATGTTCCATTTTTGGTTTATATTGACTTTCACATGTG
GAGTCTTTCATGCATGGCCATTCTTATATCATTGCCACAATTCTGAATAC
GACTTGCCACATTTTTTGCATGTGCTTTGTACTCACATAATAATTTTACG
GTGCAGGCATTCGTGTTCAGAGCCTTAAAGAAGGCCAAATTACAATGGAT
ATTGATTTCCGGTGGGGTGGTGATCCGAGCATCATCCTAGGCATTGAGGC
TGCAATGGTTGCTTCTATACCCATTCAGGTTTGTAAATTTGACCAATTTG
TGATCTTATGATTTAATGTACTATTGGTTTCTTCTTTCTCTATCACATTG
ATTATACGTGTGCTACTACCTGTCTACTCAATATTGTGTACTTATCGCTG
CAGTTAAAGGACCTCCAAGTTTTTACTGTCATTCGTGTTATCTTCCAACT
TACTGATGAAATTCCATGCATCTCTGCTGTAGTTGTTGCCTTACTTTCTG
AGGTACATTTGAGCAAGAATGTCAATGTTATTGGCTATTTTTCATTATAT
TTTAAGTTTTGGCTTTACCTTCTGTGCACATTTAAGCAATAATATCTGTT
TGATTAAATATTCTTTATTAAATTCTCTTTTGAAGGTTTGTTCAGTGAGT
TGAGGAAGGATATCTTGTTATGATATTTTTAATGCAACTTCAACCTACAA
TTAGTGAAATGCTAATGTTATGAAATTTAATTGCTCCTTTTGGCTTTGAG
ATGGCAAATTGCATTTGATAATAGAATGAGATGTTTATAGTTTGCTCCAC
ACCTGAACTTGAAACTTTGAGTCACTTGCAAGGAGTGTGGCTATGGTTTC
TACTAATTTTAATGCCTAAGCCAAATAATATATAAGGTGGTCTCCTGTAT
ATAAATTTCTCTGAAAGGCCCTTATATCTTAATTTATCGATCGTACGGAG
TCGAGTCAGCATCAGCTTTTTTTAAGAAGTAGTTAAGGTTACCCTCTTAA
GTTTTTAATTGAGTGCATATAACCTCTTAAGTTTTTTATTTAGTATATTG
AATTTTGATTTTTCATCGTAAAAATAGATATTTGGTATTATAAGATAATA
TTACAATCACATTAATATGTGGTGTTTAAAAAAATGGCCCTAAGAAAAGG
TTCATTTGTCCTTTTTATTAACCTGGCCCTGCTTGCAAGTAGTAAATATC
ATATGTGTGGAGCAACATGTCCTGGCAATTGAAAATGTGTTGTACTGTAA
ATCTTTTAGTCAATATAGTCAGCATGCTATTGCAGAAAGGAGTAATTATC
ATTACAGCAAATAAACAAGAGATAATCTTGAGAAGTTCAATGATTGTAAA
TCTGCCTTAATTGTATAATCATACATCATGAAACTGGTAGGTTTAAGATT
AACTTATCCATGTGTAATATGTGACATGTACTAGTTAATCTATTGAAGTG
AACTTTGTCCTTTCGTGTGATTATTGTGATTGATTTTGTGTTGCAACTAT
TGCTTTTCATGCCCACTGAGTATGCATTATACGATAATATCAGTATTATT
TGTCTGATAATAGATAATGACAATCACTATTACTTTTTTATGTCATTAAA
CAGCCAAAGCCAAGAATTGATTATACTCTTAAGGCTATCGGAGGGAGTTT
AACAGCTATACCTGGACTTTCAGATATGATAGATGTAAGTTAAGTTGGGA
TGCCTTTACTTTTACAAATATACTTGCATCACTTCTCTGAAGTTCTATTA
TTATTTTATCCTAAATGTGGTTTTTTCTCATGGATAGGATACCGTAAACA
CCATTGTCACAGATATGCTCCAGTGGCCCCACAGGATTGTTGTTCCAATT
GGTGGTGTACCTGTCGACACAAGGTACCTATATTGATTTATGGAACTTTC
ATGCAAAAACTCAAAATAGTCTTCTATGAGACTTCTTCCATTTTTCTTTT
TGCCGAGTTTCCATGGTCTGTTGCTAAGCAATTTGTGCTTACATTTCCTA
CTCTTTATGTTTCTAAAAAGAAGCTTTATCATGGCAAAGGTGTGGGTTAT
CGCAAAACATGTTAATGCAGATAAGAGTGAGTCAATTGAACTGACTTCAT
CACCTGACCTTAAATGTACTAGGAAGTAATAATTAAGGCCTAGTTACAAT
TCTTGCTGTATGTACGCTCCTGAGATTCTGTAGTAGAGCGATGGCGTCCT
GTCATTTGCGCTTAGTTGATGCGGGGATGTAAAATAGAATGAACTGACCC
ATACTGCTGCCACGCCTCATTGTTTTACCCTGTGAGGGGCAATGTGGAGA
ATGCCTGTGACAGTTTACCTAGAATATCCAAGTTTCTATTTACTTAGTGG
GTTGTGAATTAGTGATAGGCTGATAGCTAATTAGAATTTTTACCTATGTG
AATTTGATTGCATGACAATTGACAACAAATAGGCAACTAAGGATATTAAA
GTGAAAATAGAAATCAAGTTTTTTTCTTTTATGAATGAGGTGCGCTCTTT
AATTGTCTGCAATATACATCTGAAGGCTATCTGCCAAGTTGCACTGATCT
TTTGTCGATGTTATACTTTTATGTTTTATGTTGCAGATTTTAGAATAGCT
ATTTGGCAATGAGTACTTGCAAGTTGTTCTACAAAATCTGTCTTAGAAAT
TCTTAATTGTCTTTTGTCTCATCGAGAAATTAATCATCAAATGAAAACTC
CCTATTATTTAGGATTTACGGCTTAGCTTGTATATCTGTACAGCAGGCAT
CTTATTTTGTTGTTAGTTCCTTGTGCTTGTTAGTCCAACTGCAGTGTTTG
GATAGAGAAGCAATTTAAGTATGTTTGTTAAGGTTCTTTGATCATGCATT
AAACAATCCTCTGATTTTTATTTGATCATATGTTCGTAATAATTAATACC
TGTTCCTGTACTGTAATCCAGTGATTTGGAGCTTAAACCACAAGGGAAGC
TTACTCTGACAGTAGTTAAGGCAAATGAATTGAAGAACATGGAGATGATT
GGAAAATCTGATCCATATGTGGTTCTGTACATAAGACCGCTTTTCAAGGT
TAAGACAAAGGTTGTCGATAATAACTTGAATCCTGTTTGGGACGAGACTT
TTGAGTTGATTGCCGAAGACAAGGAAACTCAGGCTCTCATATTTGAGGTT
TTTGTCCTATAACCTTCTCTTCATGTATGTTGCATTCTGTTCTTTTCTAG
ATTAGTAGATTCGTTTGGTGCTTTAATATGTTGACACAATAGAGATATAC
TATAATATTAAAAGATGCAACATGATGACTTGGCAATATCTCCAAGCAAT
AAGCGTTAGTTAAAAATAATTTGCAGTATAGTTTGTGACGTAAGCTACTT
AATACTTCTTCTGTGTTAGTTAACTTGTGCAGTGTGTCGCCTATGGCATC
AATTTGGGGAGATGAACTTTGAAGTAAATGAAAAAGAGAAAGCAGCAGAA
AAGCCAAGGACACCTTTAATATCATATATCTTGTAAAAGTTAATTATGTT
ACCTCCACCTGACAAAAAAAGTTGTTATTTCTATATGTTTAGTTTGCTGA
CATTCATTGCTGCTGGAATTGTTTAGAATTCTAAATCCTATCTTTGAACT
TTCTACGATCTATATAGATCTATCTTTGCTGTAAATATAATTGAAAGTTC
TTTATGCAGGTCTTTGACCAAGACATTGGACAAGACAAGCGTCTGGGTAT
AGCAAAGTTACCATTACGTGAGCTGGAAGCTGATACGACAAAGGAGATGC
AGCTGAGACTGATGCCATCGCTAGATATGCTTAAGATAAAAGATAAGAAG
GATAGGGGTACTATTACTGTTAAGGTACATACCGAATGACCATTTACAAC
TTCACCTATAATTAATTGATTTATTTCTTCAGGAAAAGAACACTTTTTTT
CCTCTTTTAACGTGTTAGTCACTTGGTCGTTTAGCTATATAGTTATTATG
GTGCGCCTAGGTACTAGATTCATTGCCGTCCGAAGCTCTACTGCATTATC
TCAATTGAAGTGAGAGCCTCTGTGTTCTGGCTTTTAAGTTTAAATTTGAG
GGATAGCATGAACTTGCTTCAAGAGACTCTTAGTTGTGTTTGGTTGGGAT
GAATGAATTTGGAGGGAATAAAATAAAATTTGAACTACATCATGTGTCAA
TATTCATTCCTTCCTCCAAAACCTAAGCTAGACCTCAAACCCCCATAAAA
AGGAATGCTCCATTTCCAATGATACCCGTGCTTCTCAAATCTTACCATAA
CAAAATTGCACCAACTTATTTTTTTTCAAAATCTTTCTTACCTTCATTAT
TTTCATATTGACTCAGTGCATTCCATCAACATTTAGGCTGTGTGTTTTTA
TTAATGGGAATGAAATTGAGGAGAATGTAATGGGATCTGACTCTTATTTG
GGCAGATGTTTATAGTTTTCATTCCTTTCCAATAATTTAAACGAGAACTC
TATCCTGCTATGTTTGGAAGGAGTGCTGCATTCTCCTCCTTCCTCATTTT
TCCTAAAATCTTCATCATAGAAAATATTGACTGTCGTGTTTGTTCACTAT
TATTCTTTTTTCATACATGGACACAACCTTAGTGACTCCTCATTTAAAAA
GAACCTCCCCCAACTCCTAACTAATATTTTGTGATAAATTGATAAGATTC
CTCTTATTCTGTCATATTTTTCTTTTCCATTTATGGATTCAAATTACTTT
TAGTAAAATAATAATGGGTGACCCCAAAGATTATTATTGGAGATGGACAC
ACACAGAGTCATTATGAGCCAAATTTATTCTATACTGTAGTTTTTCAGGG
AGTGGGTTAAGAGTTTGTTGGAGATACTCTGAGCATGTCTTGGTGTGGGA
CATGCTTTAGCTTGGAAGCCGTAGCGTGCAATGCTACATTATTTGAAGTA
AAATATGGAAGTATCTATTACGTCAACCTGATATATGTTCCATTTAGAAT
TTCATATTTCCCCTCTGGCCTCTTGAATTATAGGTTTTGTATCATGAATT
CAACAAAGAAGAGCAATATCAAGCCCTGGAAGATGAGAAACGAATTCTAG
AAGAGAGAAAGAAACTAAAAGAAGCAGGGGTTATTGGTAGCACGATGGAT
GCTGTGGGGGCAGTGGGCAGTGGTATTGGTGCTGGAGTCGGGATGGTGGG
TACTGGTCTCGGTGCTGGAGTTGGGATTGTCGGGAGTGGCTTCGGAGCTG
TTGGAAGTGGTCTGAGCAAAGCTGGAAAGTTTATGGGCAGAAGCATAACA
GGGCAGTCTACTTCTAAGAAGAGTGGTACAAGCACCCCAGTCAACTCTAC
TCAGGAAAATGGTGGCGCAAAACCACTTTAGTAATTTAGGATTGTCAGAC
CTAAAATGTTTATGATTTATGTATCAAAACTTACTTGTGGATTATTTACT
TACGGAGTATATTTGGTATAATTGTTTTTTCTTGTGCTAGTGTGATCTTG
TGACAACATGAACTTTAGCTTTTCCATTATTTGCTTGATTCGTACTGCTG
AATAAGAATGTGGTTTATATGTAA
Sequence Length: 
18574
Sequence Checksum: 
b25480dc75b7a316c91550d31d4e4db2
View location in JBrowse: 
Gene: 
LOC108207637
Gene Biotype: 
protein_coding
Gbkey: 
Gene