MK002809 K0253

Resource Type: 
Genetic Marker
Name: 
MK002809 K0253
Identifier: 
MK002809_K0253
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK002809 K0253, is adjacent to primer, K0253_X.
The genetic_marker, MK002809 K0253, is adjacent to primer, K0253_Y.
The genetic_marker, MK002809 K0253, is adjacent to primer, K0253_Common.
The genetic_marker, MK002809 K0253, is adjacent to gene, DCAR_030793.
The genetic_marker, MK002809 K0253, is located in gene, LOC108202967.
The marker_locus, K0253, is an instance of genetic_marker, MK002809 K0253.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr941.375K0253MapViewer
2016 Integ NG full mapCH942.408K0253MapViewer
Synonyms: 
  • MK002809
Sequence Coordinates: 
DCARv2_Chr9:29771244..29771295+
View location in JBrowse: 
DCARv2_Chr9:29771244..29771295+
Sequence: 
TTTATTKGTCACCTTGCCGGAAAATCAAGAAAGTATAWTTTTCCGGCAAC
AAGAAAGAAGATGTACTCTGC
Sequences: 
>MK002809_K0253 ID=MK002809_K0253; Name=MK002809 K0253; organism=Daucus carota; type=genetic_marker
TTTATTKGTCACCTTGCCGGAAAATCAAGAAAGTATAWTTTTCCGGCAAC
AAGAAAGAAGATGTACTCTGC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTTATTKGTCACCTTGCCGGAAAATCAAGAAAGTATA
Three Prime Flanking Region: 
TTTTCCGGCAACAAGAAAGAAGATGTACTCTGC
SNP: 
A/T