MK002960 K0404

Resource Type: 
Genetic Marker
Name: 
MK002960 K0404
Identifier: 
MK002960_K0404
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK002960 K0404, is adjacent to primer, K0404_X.
The genetic_marker, MK002960 K0404, is adjacent to primer, K0404_Y.
The genetic_marker, MK002960 K0404, is adjacent to primer, K0404_Common.
The genetic_marker, MK002960 K0404, is located in gene, DCAR_002339.
The genetic_marker, MK002960 K0404, is located in gene, LOC108205107.
The marker_locus, K0404, is an instance of genetic_marker, MK002960 K0404.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH144.793K0404MapViewer
2016 80592 NG full mapChr130.153K0404MapViewer
2016 70796 NG full mapChr124.593K0404MapViewer
Synonyms: 
  • MK002960
Sequence Coordinates: 
DCARv2_Chr1:28444747..28444795-
View location in JBrowse: 
DCARv2_Chr1:28444747..28444795-
Sequence: 
TYTTCATGACAATAGGTATACCTGTTACATGTCTGGCYATGATGTACTTT
GTTCGAGCATGCACGCCAGCT
Sequences: 
>MK002960_K0404 ID=MK002960_K0404; Name=MK002960 K0404; organism=Daucus carota; type=genetic_marker
TYTTCATGACAATAGGTATACCTGTTACATGTCTGGCYATGATGTACTTT
GTTCGAGCATGCACGCCAGCT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TYTTCATGACAATAGGTATACCTGTTACATGTCTGGC
Three Prime Flanking Region: 
ATGATGTACTTTGTTCGAGCATGCACGCCAGCT
SNP: 
C/T