MK003494 K0938

Resource Type: 
Genetic Marker
Name: 
MK003494 K0938
Identifier: 
MK003494_K0938
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK003494 K0938, is adjacent to primer, K0938_X.
The genetic_marker, MK003494 K0938, is adjacent to primer, K0938_Y.
The genetic_marker, MK003494 K0938, is adjacent to primer, K0938_Common.
The genetic_marker, MK003494 K0938, is located in gene, DCAR_017804.
The genetic_marker, MK003494 K0938, is located in gene, LOC108220358.
The marker_locus, K0938, is an instance of genetic_marker, MK003494 K0938.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr523.474K0938MapViewer
2016 Integ NG full mapCH545.122K0938MapViewer
Synonyms: 
  • MK003494
Sequence Coordinates: 
DCARv2_Chr5:23628561..23628606-
View location in JBrowse: 
DCARv2_Chr5:23628561..23628606-
Sequence: 
TGTGTCAGGGACAGTAATAGCCACTTTCTGTCCCATTYGACAGTGTCCAG
CAACAGTGCATATGTAATAGT
Sequences: 
>MK003494_K0938 ID=MK003494_K0938; Name=MK003494 K0938; organism=Daucus carota; type=genetic_marker
TGTGTCAGGGACAGTAATAGCCACTTTCTGTCCCATTYGACAGTGTCCAG
CAACAGTGCATATGTAATAGT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TGTGTCAGGGACAGTAATAGCCACTTTCTGTCCCATT
Three Prime Flanking Region: 
GACAGTGTCCAGCAACAGTGCATATGTAATAGT
SNP: 
C/T