MK004112 K1556

Resource Type: 
Genetic Marker
Name: 
MK004112 K1556
Identifier: 
MK004112_K1556
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004112 K1556, is adjacent to primer, K1556_X.
The genetic_marker, MK004112 K1556, is adjacent to primer, K1556_Y.
The genetic_marker, MK004112 K1556, is adjacent to primer, K1556_Common.
The genetic_marker, MK004112 K1556, is located in gene, DCAR_003183.
The genetic_marker, MK004112 K1556, is located in gene, LOC108204289.
The marker_locus, K1556, is an instance of genetic_marker, MK004112 K1556.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH150.847K1556MapViewer
2016 80592 NG full mapChr124.631K1556MapViewer
Synonyms: 
  • MK004112
Sequence Coordinates: 
DCARv2_Chr1:36639871..36639918-
View location in JBrowse: 
DCARv2_Chr1:36639871..36639918-
Sequence: 
CTGGAGTATATGGAGCTCTAATGGCGCTAACCTATGCYAACGGAGCTTCT
ACATCTTCAACGGGTTTATAT
Sequences: 
>MK004112_K1556 ID=MK004112_K1556; Name=MK004112 K1556; organism=Daucus carota; type=genetic_marker
CTGGAGTATATGGAGCTCTAATGGCGCTAACCTATGCYAACGGAGCTTCT
ACATCTTCAACGGGTTTATAT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CTGGAGTATATGGAGCTCTAATGGCGCTAACCTATGC
Three Prime Flanking Region: 
AACGGAGCTTCTACATCTTCAACGGGTTTATAT
SNP: 
C/T