MK004401 K1845

Resource Type: 
Genetic Marker
Name: 
MK004401 K1845
Identifier: 
MK004401_K1845
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004401 K1845, is adjacent to primer, K1845_X.
The genetic_marker, MK004401 K1845, is adjacent to primer, K1845_Y.
The genetic_marker, MK004401 K1845, is adjacent to primer, K1845_Common.
The genetic_marker, MK004401 K1845, is located in gene, DCAR_001503.
The genetic_marker, MK004401 K1845, is located in gene, LOC108204836.
The marker_locus, K1845, is an instance of genetic_marker, MK004401 K1845.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr119.331K1845MapViewer
2016 70796 NG bin mapChr119.331K1845MapViewer
2016 Integ NG bin mapCH136.663K1845MapViewer
2016 Integ NG full mapCH137.729K1845MapViewer
2016 80592 NG full mapChr140.304K1845MapViewer
Synonyms: 
  • MK004401
Sequence Coordinates: 
DCARv2_Chr1:16572291..16572345+
View location in JBrowse: 
DCARv2_Chr1:16572291..16572345+
Sequence: 
TATCAAAGAATCGATCAAGCAACACTGCCAAAACCTCRCAGATGTCAGCA
TAGAGCTTAAAACTCTCTCTG
Sequences: 
>MK004401_K1845 ID=MK004401_K1845; Name=MK004401 K1845; organism=Daucus carota; type=genetic_marker
TATCAAAGAATCGATCAAGCAACACTGCCAAAACCTCRCAGATGTCAGCA
TAGAGCTTAAAACTCTCTCTG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TATCAAAGAATCGATCAAGCAACACTGCCAAAACCTC
Three Prime Flanking Region: 
CAGATGTCAGCATAGAGCTTAAAACTCTCTCTG
SNP: 
A/G