MK005732 K3176

Resource Type: 
Genetic Marker
Name: 
MK005732 K3176
Identifier: 
MK005732_K3176
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005732 K3176, is adjacent to primer, K3176_X.
The genetic_marker, MK005732 K3176, is adjacent to primer, K3176_Y.
The genetic_marker, MK005732 K3176, is adjacent to primer, K3176_Common.
The genetic_marker, MK005732 K3176, is located in gene, DCAR_021311.
The genetic_marker, MK005732 K3176, is located in gene, LOC108227153.
The marker_locus, K3176, is an instance of genetic_marker, MK005732 K3176.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH657.364K3176MapViewer
2016 80592 NG full mapChr68.655K3176MapViewer
Synonyms: 
  • MK005732
Sequence Coordinates: 
DCARv2_Chr6:24143774..24143831+
View location in JBrowse: 
DCARv2_Chr6:24143774..24143831+
Sequence: 
AAGGATGTTCACCATATGGATGTTCACCAGCAACTGTYCCTCCACTGTTT
GTAAGACTATGGYTACCAATG
Sequences: 
>MK005732_K3176 ID=MK005732_K3176; Name=MK005732 K3176; organism=Daucus carota; type=genetic_marker
AAGGATGTTCACCATATGGATGTTCACCAGCAACTGTYCCTCCACTGTTT
GTAAGACTATGGYTACCAATG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAGGATGTTCACCATATGGATGTTCACCAGCAACTGT
Three Prime Flanking Region: 
CCTCCACTGTTTGTAAGACTATGGYTACCAATG
SNP: 
C/T