MK005961 K3405

Resource Type: 
Genetic Marker
Name: 
MK005961 K3405
Identifier: 
MK005961_K3405
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005961 K3405, is adjacent to primer, K3405_X.
The genetic_marker, MK005961 K3405, is adjacent to primer, K3405_Y.
The genetic_marker, MK005961 K3405, is adjacent to primer, K3405_Common.
The genetic_marker, MK005961 K3405, is located in gene, DCAR_007064.
The genetic_marker, MK005961 K3405, is located in gene, LOC108205930.
The marker_locus, K3405, is an instance of genetic_marker, MK005961 K3405.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH214.825K3405MapViewer
2016 80592 NG full mapChr214.86K3405MapViewer
Synonyms: 
  • MK005961
Sequence Coordinates: 
DCARv2_Chr2:31126778..31126856-
View location in JBrowse: 
DCARv2_Chr2:31126778..31126856-
Sequence: 
AAATTGCTTTTTCAACACAGTCAACTGCTGATTTAAARTCCTCTTCTTTC
AAATAGTAATTAAGAAAAATC
Sequences: 
>MK005961_K3405 ID=MK005961_K3405; Name=MK005961 K3405; organism=Daucus carota; type=genetic_marker
AAATTGCTTTTTCAACACAGTCAACTGCTGATTTAAARTCCTCTTCTTTC
AAATAGTAATTAAGAAAAATC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAATTGCTTTTTCAACACAGTCAACTGCTGATTTAAA
Three Prime Flanking Region: 
TCCTCTTCTTTCAAATAGTAATTAAGAAAAATC
SNP: 
A/G