MK006385 K3829

Resource Type: 
Genetic Marker
Name: 
MK006385 K3829
Identifier: 
MK006385_K3829
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006385 K3829, is adjacent to primer, K3829_X.
The genetic_marker, MK006385 K3829, is adjacent to primer, K3829_Y.
The genetic_marker, MK006385 K3829, is adjacent to primer, K3829_Common.
The genetic_marker, MK006385 K3829, is located in gene, DCAR_004591.
The genetic_marker, MK006385 K3829, is located in gene, LOC108203744.
The marker_locus, K3829, is an instance of genetic_marker, MK006385 K3829.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH172.551K3829MapViewer
2016 70796 NG full mapChr159.955K3829MapViewer
Synonyms: 
  • MK006385
Sequence Coordinates: 
DCARv2_Chr1:49508960..49509014+
View location in JBrowse: 
DCARv2_Chr1:49508960..49509014+
Sequence: 
GTGGGATGGTATGTTAAGTAAAAGATCATGATCAGAAYTTTCATCTCCAA
ACTGAAAACAATCCGGCATAA
Sequences: 
>MK006385_K3829 ID=MK006385_K3829; Name=MK006385 K3829; organism=Daucus carota; type=genetic_marker
GTGGGATGGTATGTTAAGTAAAAGATCATGATCAGAAYTTTCATCTCCAA
ACTGAAAACAATCCGGCATAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GTGGGATGGTATGTTAAGTAAAAGATCATGATCAGAA
Three Prime Flanking Region: 
TTTCATCTCCAAACTGAAAACAATCCGGCATAA
SNP: 
C/T