MK006416 K3860

Resource Type: 
Genetic Marker
Name: 
MK006416 K3860
Identifier: 
MK006416_K3860
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006416 K3860, is adjacent to primer, K3860_X.
The genetic_marker, MK006416 K3860, is adjacent to primer, K3860_Y.
The genetic_marker, MK006416 K3860, is adjacent to primer, K3860_Common.
The genetic_marker, MK006416 K3860, is located in gene, DCAR_021217.
The genetic_marker, MK006416 K3860, is located in gene, LOC108224949.
The marker_locus, K3860, is an instance of genetic_marker, MK006416 K3860.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH658.287K3860MapViewer
2016 70796 NG full mapChr652.627K3860MapViewer
Synonyms: 
  • MK006416
Sequence Coordinates: 
DCARv2_Chr6:24996782..24996841-
View location in JBrowse: 
DCARv2_Chr6:24996782..24996841-
Sequence: 
ACCTAATCCAAGAGGGTCTTCAATTAAACTCCTGTCAWAAAATGGGACCT
GAAAATTCGAACCATCCTCTT
Sequences: 
>MK006416_K3860 ID=MK006416_K3860; Name=MK006416 K3860; organism=Daucus carota; type=genetic_marker
ACCTAATCCAAGAGGGTCTTCAATTAAACTCCTGTCAWAAAATGGGACCT
GAAAATTCGAACCATCCTCTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ACCTAATCCAAGAGGGTCTTCAATTAAACTCCTGTCA
Three Prime Flanking Region: 
AAAATGGGACCTGAAAATTCGAACCATCCTCTT
SNP: 
A/T