Resource Type:
Polypeptide
Name:
DCAR_021084
Identifier:
DCAR_021084.mRNA-protein
Sequence:
MWGRSTLSRTGSFRPENLGQNALAMIGNLCFTLFVLVVLVFTIIAATYEP
EDPLFHPSSKITNFLTSDLNATFKSDSTVVKTGEDFMAPNQTVFETTFIN
VTDVNLGVPLREDINADEVTPFECESQMGKPIDCTDPAVFNLLMTSAIEE
FKDIHFYRFGKPVRGYNDSSCHMAWRFRPKEGKTAAFYKDYRSFVIHRSD
NCTCSFVIHRSDNCTLSVVRIGDYHSGGNARKRKRNQRPGFEKPQMNQEQ
QGAALPVVGEFVNDTLPAIETEGSFSSGKYLLYDGGGERCKSMDHYLWSF
MCALGEAQYLNRTLVMDMSICLSSIYTSSGQDEEQKDFRYYFDFEHLKES
ASVLDRTQFWVDWNKWHQKDGLALFLVDDVKITPMKLADVQDTLVMRKFG
LNEPDNYWYRVCEGEAESVIQRPWHMIWKSRRLMDIVSAIATKLNWDFDS
VHVVRGEKARNLELWPNLAADTAPEALISTLQEKVDEGRNLYIATDEPDT
SFFDPLKDKFSTHFLDEYKELWDENSEWYSETMKLNSGVPVEFDGYMRAS
VDTEVFLRGKKQIETFNDLTRDCKDGVNTCSTAS*
Sequence Length:
585
Sequence Checksum:
23fd1a5b27439c4fd5873fcc1c266b19
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_021084, derives from mRNA, DCAR_021084. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_021084 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_021084 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AIM8 ((Uncharacterized protein {ECO:0000313|EMBL:MPA55955.1}))
HSP 1 Score: 980.704 bits (2534), Expect = 0.000e+0
Identity = 464/584 (79.45%), Postives = 513/584 (87.84%), Query Frame = 0
Match: A0A5B7AIM8 ((Uncharacterized protein {ECO:0000313|EMBL:MPA55955.1}))
HSP 1 Score: 980.704 bits (2534), Expect = 0.000e+0
Identity = 464/584 (79.45%), Postives = 513/584 (87.84%), Query Frame = 0
Query: 1 MWGRSTLSRTGSFRPENLGQNALAMIGNLCFTLFVLVVLVFTIIAATYEPEDPLFHPSSKITNFLTSDLNATFKSDSTVVKTGEDFMAPNQTVFETTFINVTDVNLGVPLREDINADEVTPFECESQMGKPIDCTDPAVFNLLMTSAIEEFKDIHFYRFGKPVRGYNDSSCHMAWRFRPKEGKTAAFYKDYRSFVIHRSDNCTCSFVIHRSDNCTLSVVRIGDYHSGGNARKRKRNQRPGFEKPQMNQEQQGAALPVVGEFVNDTLPAIETEGSFSSGKYLLYDGGGERCKSMDHYLWSFMCALGEAQYLNRTLVMDMSICLSSIYTSSGQDEEQKDFRYYFDFEHLKESASVLDRTQFWVDWNKWHQKDGLALFLVDDVKITPMKLADVQDTLVMRKFGLNEPDNYWYRVCEGEAESVIQRPWHMIWKSRRLMDIVSAIATKLNWDFDSVHVVRGEKARNLELWPNLAADTAPEALISTLQEKVDEGRNLYIATDEPDTSFFDPLKDKFSTHFLDEYKELWDENSEWYSETMKLNSGVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSTAS 584
M GRS+LSRTGSFRPENLGQNAL MIGNLCFT+FV+ VL+FTIIAATYEPEDPLFHPS+KIT FLTS NATFKSD+TVVKTGEDFMA NQT F TFIN+TDV+ G P+ T ECE ++ KPIDCTDP VF+L+M +AIE FKDIHFYRFGK VRG NDSSCHMAWRFRPKEGKTAAFYKDYRSFVI RS+N CTLSVV IGDYHSGGNARKRK+NQ+PGFEK QEQQG +LPVVGE VND+LP +E+EGSFS G+YL+Y GGG+RCKSMDHYLWSFMCALGEAQYLNRTLVMD+SICLSSIYTSS QDEE KDFR+YFDFEHLKES+SVLD+ QFW DWNKW QKDGL+L+LV+D+K TPMKL+ V+DTL+MRKFG EPDNYWYRVCEGE ESV+QRPWHMIWKSRRLMDIVSAIA++LNWDFDSVHVVRGEKA N ELWPNLAADT+PEAL+ST Q+K+++GRN+YIAT EPDTSFFDPLKDK+STHFL+EYK+LWDENSEWYSET KLN+GVPVEFD YMR SVDTEVFLRGKKQIETFNDLTRDCKDGVNTCS AS
Sbjct: 1 MLGRSSLSRTGSFRPENLGQNALQMIGNLCFTVFVIGVLIFTIIAATYEPEDPLFHPSTKITTFLTSTSNATFKSDNTVVKTGEDFMAANQTAF-ATFINITDVDSGTPV--------TTNLECEGEVDKPIDCTDPEVFHLMMKAAIEHFKDIHFYRFGKSVRGSNDSSCHMAWRFRPKEGKTAAFYKDYRSFVISRSEN------------CTLSVVAIGDYHSGGNARKRKKNQKPGFEKKPAKQEQQGISLPVVGETVNDSLPVVESEGSFSGGRYLIYTGGGDRCKSMDHYLWSFMCALGEAQYLNRTLVMDLSICLSSIYTSSKQDEEGKDFRFYFDFEHLKESSSVLDQDQFWSDWNKWQQKDGLSLYLVEDLKFTPMKLSGVKDTLIMRKFGSVEPDNYWYRVCEGETESVVQRPWHMIWKSRRLMDIVSAIASRLNWDFDSVHVVRGEKAVNKELWPNLAADTSPEALLSTFQDKIEDGRNVYIATTEPDTSFFDPLKDKYSTHFLNEYKDLWDENSEWYSETTKLNNGVPVEFDDYMRVSVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSAAS 563
BLAST of DCAR_021084 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5A4N4 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8524898.1}))
HSP 1 Score: 979.934 bits (2532), Expect = 0.000e+0
Identity = 463/584 (79.28%), Postives = 514/584 (88.01%), Query Frame = 0
Match: A0A5J5A4N4 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8524898.1}))
HSP 1 Score: 979.934 bits (2532), Expect = 0.000e+0
Identity = 463/584 (79.28%), Postives = 514/584 (88.01%), Query Frame = 0
Query: 1 MWGRSTLSRTGSFRPENLGQNALAMIGNLCFTLFVLVVLVFTIIAATYEPEDPLFHPSSKITNFLTSDLNATFKSDSTVVKTGEDFMAPNQTVFETTFINVTDVNLGVPLREDINADEVTPFECESQMGKPIDCTDPAVFNLLMTSAIEEFKDIHFYRFGKPVRGYNDSSCHMAWRFRPKEGKTAAFYKDYRSFVIHRSDNCTCSFVIHRSDNCTLSVVRIGDYHSGGNARKRKRNQRPGFEKPQMNQEQQGAALPVVGEFVNDTLPAIETEGSFSSGKYLLYDGGGERCKSMDHYLWSFMCALGEAQYLNRTLVMDMSICLSSIYTSSGQDEEQKDFRYYFDFEHLKESASVLDRTQFWVDWNKWHQKDGLALFLVDDVKITPMKLADVQDTLVMRKFGLNEPDNYWYRVCEGEAESVIQRPWHMIWKSRRLMDIVSAIATKLNWDFDSVHVVRGEKARNLELWPNLAADTAPEALISTLQEKVDEGRNLYIATDEPDTSFFDPLKDKFSTHFLDEYKELWDENSEWYSETMKLNSGVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSTAS 584
M GR +LSRTGSFRPENLGQNALAMIGNLCFT+FV+ VL+FTIIAATYEPEDPLFHPS+KIT FLTS+ NATFKSD+TVVKTGEDFMA NQT F TFIN+TDV+ G P+ T FECES++ KPIDCTDP VF+L+M AIE+FKDIHFYRFGKPVRG NDSSCHMAWRFRPKEGKTA FYKDYRSFVI RSDN CTLSVVRIGDYHSGGNARKRK+ Q+ GFEK QEQQ ALPVVGE VNDTLP +E+EGSFS G+YL+Y GGG+RCKSM+HYLWSFMCALGEAQYLNRTLVMD+SICLSSIYTSS QDEE KDFR+YFDFEHLKESAS+LD+ QFW DWNKW+QKDGL LV+D+KITPM LA V+DTL+MRKFG EPDNYWYRVCEGE ESV+QRPWH+IWKSRRLMDIVS IA++LNWDFDSVHVVRGEKA+N ELWPNL ADT+PEAL+STL++K+++GRN+YIAT+EPDTSF DPLKDK+STHFL+EYK+LWDENSEWYSET KLN+GVPVEFDGYMR SVDTEVFLRGKKQIETFNDLTRDCKDGVNTCST+S
Sbjct: 1 MLGRYSLSRTGSFRPENLGQNALAMIGNLCFTIFVIGVLIFTIIAATYEPEDPLFHPSTKITTFLTSNSNATFKSDNTVVKTGEDFMASNQTAF-ATFINITDVDTGTPV--------TTNFECESEVDKPIDCTDPEVFHLMMKVAIEQFKDIHFYRFGKPVRGSNDSSCHMAWRFRPKEGKTATFYKDYRSFVISRSDN------------CTLSVVRIGDYHSGGNARKRKKTQKAGFEKISATQEQQVIALPVVGETVNDTLPVVESEGSFSHGRYLIYSGGGDRCKSMNHYLWSFMCALGEAQYLNRTLVMDLSICLSSIYTSSKQDEEGKDFRFYFDFEHLKESASILDQGQFWSDWNKWYQKDGLRFHLVEDLKITPMMLAGVKDTLIMRKFGSVEPDNYWYRVCEGETESVVQRPWHLIWKSRRLMDIVSGIASRLNWDFDSVHVVRGEKAKNKELWPNLEADTSPEALLSTLEDKIEDGRNVYIATNEPDTSFLDPLKDKYSTHFLNEYKDLWDENSEWYSETTKLNNGVPVEFDGYMRVSVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSTSS 563
BLAST of DCAR_021084 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5A812 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8526640.1}))
HSP 1 Score: 975.696 bits (2521), Expect = 0.000e+0
Identity = 460/583 (78.90%), Postives = 514/583 (88.16%), Query Frame = 0
Match: A0A5J5A812 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8526640.1}))
HSP 1 Score: 975.696 bits (2521), Expect = 0.000e+0
Identity = 460/583 (78.90%), Postives = 514/583 (88.16%), Query Frame = 0
Query: 1 MWGRSTLSRTGSFRPENLGQNALAMIGNLCFTLFVLVVLVFTIIAATYEPEDPLFHPSSKITNFLTSDLNATFKSDSTVVKTGEDFMAPNQTVFETTFINVTDVNLGVPLREDINADEVTPFECESQMGKPIDCTDPAVFNLLMTSAIEEFKDIHFYRFGKPVRGYNDSSCHMAWRFRPKEGKTAAFYKDYRSFVIHRSDNCTCSFVIHRSDNCTLSVVRIGDYHSGGNARKRKRNQRPGFEKPQMNQEQQGAALPVVGEFVNDTLPAIETEGSFSSGKYLLYDGGGERCKSMDHYLWSFMCALGEAQYLNRTLVMDMSICLSSIYTSSGQDEEQKDFRYYFDFEHLKESASVLDRTQFWVDWNKWHQKDGLALFLVDDVKITPMKLADVQDTLVMRKFGLNEPDNYWYRVCEGEAESVIQRPWHMIWKSRRLMDIVSAIATKLNWDFDSVHVVRGEKARNLELWPNLAADTAPEALISTLQEKVDEGRNLYIATDEPDTSFFDPLKDKFSTHFLDEYKELWDENSEWYSETMKLNSGVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSTA 583
M GR +LSRTGSFRPENLGQNAL MIGNLCFT+FV+ VL+FTIIAATYEPEDPLFHPS+KITNFLTS+ NATFKSD+TVVKTGEDFMA NQT F TFIN+TDV+ P+ ++ ECE ++ KP+DCTDP VF+L+M +AIE FKDIHFYRFGK VRG NDSSCHMAWRFRPKEGKTAAFYKDYRSFVI RS+N CTLSVV IGDYHSGGNARKRK+NQ+PGFEK QEQQ ALPVVGE VND+LP +E+EGSFS G+YL+Y GGG+RCKSMDHYLWSFMCALGEA YLNRTL+MD+SICLSSIYTSS QDEE KDFR+YFDFEHLKESASVLD+ QFW DWNKWHQKDGL+L LV+D++ITPMKLA ++DTL+MRKFG EPDNYWYRVCEGE ESV+QRPWH+IWKSRRLMDIVSAIA++LNWDFDSVHVVRGEKA+N ELWPNL ADT+PEAL+STLQ K+++GRNLYIAT EPDTSFFDPLKDK+STHFL+EY++LWDENSEWYSET KLN+GVPVEFDGYMR SVDTEVFLRGKKQIETFNDLTRDCKDGVNTCS+A
Sbjct: 1 MLGRPSLSRTGSFRPENLGQNALQMIGNLCFTIFVIGVLIFTIIAATYEPEDPLFHPSTKITNFLTSNSNATFKSDNTVVKTGEDFMAANQTAF-ATFINITDVDSETPVTNNL--------ECEGEIDKPVDCTDPEVFHLMMKAAIEHFKDIHFYRFGKSVRGSNDSSCHMAWRFRPKEGKTAAFYKDYRSFVISRSEN------------CTLSVVGIGDYHSGGNARKRKKNQKPGFEKKPTKQEQQVIALPVVGETVNDSLPVVESEGSFSRGRYLIYTGGGDRCKSMDHYLWSFMCALGEAHYLNRTLIMDLSICLSSIYTSSKQDEEGKDFRFYFDFEHLKESASVLDQDQFWSDWNKWHQKDGLSLHLVEDLRITPMKLAGLKDTLIMRKFGSVEPDNYWYRVCEGETESVVQRPWHLIWKSRRLMDIVSAIASRLNWDFDSVHVVRGEKAKNKELWPNLEADTSPEALLSTLQGKIEDGRNLYIATSEPDTSFFDPLKDKYSTHFLNEYQDLWDENSEWYSETTKLNNGVPVEFDGYMRVSVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSSA 562
BLAST of DCAR_021084 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AJJ4 ((Uncharacterized protein {ECO:0000313|EMBL:MPA55956.1}))
HSP 1 Score: 974.541 bits (2518), Expect = 0.000e+0
Identity = 460/581 (79.17%), Postives = 511/581 (87.95%), Query Frame = 0
Match: A0A5B7AJJ4 ((Uncharacterized protein {ECO:0000313|EMBL:MPA55956.1}))
HSP 1 Score: 974.541 bits (2518), Expect = 0.000e+0
Identity = 460/581 (79.17%), Postives = 511/581 (87.95%), Query Frame = 0
Query: 1 MWGRSTLSRTGSFRPENLGQNALAMIGNLCFTLFVLVVLVFTIIAATYEPEDPLFHPSSKITNFLTSDLNATFKSDSTVVKTGEDFMAPNQTVFETTFINVTDVNLGVPLREDINADEVTPFECESQMGKPIDCTDPAVFNLLMTSAIEEFKDIHFYRFGKPVRGYNDSSCHMAWRFRPKEGKTAAFYKDYRSFVIHRSDNCTCSFVIHRSDNCTLSVVRIGDYHSGGNARKRKRNQRPGFEKPQMNQEQQGAALPVVGEFVNDTLPAIETEGSFSSGKYLLYDGGGERCKSMDHYLWSFMCALGEAQYLNRTLVMDMSICLSSIYTSSGQDEEQKDFRYYFDFEHLKESASVLDRTQFWVDWNKWHQKDGLALFLVDDVKITPMKLADVQDTLVMRKFGLNEPDNYWYRVCEGEAESVIQRPWHMIWKSRRLMDIVSAIATKLNWDFDSVHVVRGEKARNLELWPNLAADTAPEALISTLQEKVDEGRNLYIATDEPDTSFFDPLKDKFSTHFLDEYKELWDENSEWYSETMKLNSGVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDGVNTCS 581
M GRS+LSRTGSFRPENLGQNAL MIGNLCFT+FV+ VL+FTIIAATYEPEDPLFHPS+KIT FLTS NATFKSD+TVVKTGEDFMA NQT F TFIN+TDV+ G P+ T ECE ++ KPIDCTDP VF+L+M +AIE FKDIHFYRFGK VRG NDSSCHMAWRFRPKEGKTAAFYKDYRSFVI RS+N CTLSVV IGDYHSGGNARKRK+NQ+PGFEK QEQQG +LPVVGE VND+LP +E+EGSFS G+YL+Y GGG+RCKSMDHYLWSFMCALGEAQYLNRTLVMD+SICLSSIYTSS QDEE KDFR+YFDFEHLKES+SVLD+ QFW DWNKW QKDGL+L+LV+D+K TPMKL+ V+DTL+MRKFG EPDNYWYRVCEGE ESV+QRPWHMIWKSRRLMDIVSAIA++LNWDFDSVHVVRGEKA+N ELWPNL ADT+ EAL+STL++K+++GR+LYIAT+EPDTSF DPLKDK+STHFLDEYK+LWDENS+WYSET KLN GVPVEFDGYMR SVDTEVFLRGKKQIETFNDLTRDCKDGVNTCS
Sbjct: 1 MLGRSSLSRTGSFRPENLGQNALQMIGNLCFTVFVIGVLIFTIIAATYEPEDPLFHPSTKITTFLTSTSNATFKSDNTVVKTGEDFMAANQTAF-ATFINITDVDSGTPV--------TTNLECEGEVDKPIDCTDPEVFHLMMKAAIEHFKDIHFYRFGKSVRGSNDSSCHMAWRFRPKEGKTAAFYKDYRSFVISRSEN------------CTLSVVAIGDYHSGGNARKRKKNQKPGFEKKPAKQEQQGISLPVVGETVNDSLPVVESEGSFSGGRYLIYTGGGDRCKSMDHYLWSFMCALGEAQYLNRTLVMDLSICLSSIYTSSKQDEEGKDFRFYFDFEHLKESSSVLDQDQFWSDWNKWQQKDGLSLYLVEDLKFTPMKLSGVKDTLIMRKFGSVEPDNYWYRVCEGETESVVQRPWHMIWKSRRLMDIVSAIASRLNWDFDSVHVVRGEKAKNKELWPNLEADTSSEALLSTLEDKIEDGRDLYIATNEPDTSFLDPLKDKYSTHFLDEYKDLWDENSDWYSETAKLNYGVPVEFDGYMRVSVDTEVFLRGKKQIETFNDLTRDCKDGVNTCS 560
BLAST of DCAR_021084 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BPR0 ((Uncharacterized protein {ECO:0000313|EMBL:MPA70932.1}))
HSP 1 Score: 963.755 bits (2490), Expect = 0.000e+0
Identity = 458/585 (78.29%), Postives = 509/585 (87.01%), Query Frame = 0
Match: A0A5B7BPR0 ((Uncharacterized protein {ECO:0000313|EMBL:MPA70932.1}))
HSP 1 Score: 963.755 bits (2490), Expect = 0.000e+0
Identity = 458/585 (78.29%), Postives = 509/585 (87.01%), Query Frame = 0
Query: 1 MWGRSTLSRTGSFRPENLGQNALAMIGNLCFTLFVLVVLVFTIIAATYEPEDPLFHPSSKITNFLTSDLNATFKSDSTVVKTGEDFMAPNQTVFETTFINVTDVNLGVPLREDINADEVTPFECESQMGKPIDCTDPAVFNLLMTSAIEEFKDIHFYRFGKPVRGYNDSSCHMAWRFRPKEGKTAAFYKDYRSFVIHRSDNCTCSFVIHRSDNCTLSVVRIGDYHSGGNARKRKRNQRPGFEK-PQMNQEQQGAALPVVGEFVNDTLPAIETEGSFSSGKYLLYDGGGERCKSMDHYLWSFMCALGEAQYLNRTLVMDMSICLSSIYTSSGQDEEQKDFRYYFDFEHLKESASVLDRTQFWVDWNKWHQKDGLALFLVDDVKITPMKLADVQDTLVMRKFGLNEPDNYWYRVCEGEAESVIQRPWHMIWKSRRLMDIVSAIATKLNWDFDSVHVVRGEKARNLELWPNLAADTAPEALISTLQEKVDEGRNLYIATDEPDTSFFDPLKDKFSTHFLDEYKELWDENSEWYSETMKLNSGVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSTAS 584
M R +LSRTGSFRPENLGQNAL MIGNLCFT+FV+ VL+FTIIAATYEPEDPLFHPS+ IT FLTS+ NATF SD+TVVKTGEDFMA NQT F TFIN+TDV+ G P T F+CE ++ KPIDCTDP VF+L+M AIE+FKDIHFYRFGKPVRG NDSSCHMAW FRPKEGKTAAFYKDYRSFVI RS+N CTLSVVRIG+YHSGGNARKRK+ Q+PGFEK P QEQQ +LPVVGE +NDTLP +E+EGSFS G+YL Y GGG+RCKSM+HYLWSFMCALGEAQYLNRTLVMD+SICLSSIYTSS QDEE KDFR+YFDFEHLKES+SVLD+ QFW DWNKW QKDGL+L+LV+D+K TPMKL+ V+DTL+MRKFG EPDNYWYRVCEGE ESV+QRPWHMIWKSRRLMDIVSAIA++LNWDFDSVHVVRGEKA N ELWPNLAADT+PEAL+ST Q+K+++GRN+YIAT EPDTSFFDPLKDK+STHFL+EYK+LWDENSEWYSET KLN+GVPVEFD YMR SVDTEVFLRGKKQIETFNDLTRDCKDGVNTCS AS
Sbjct: 1 MLDRFSLSRTGSFRPENLGQNALTMIGNLCFTIFVIGVLIFTIIAATYEPEDPLFHPSTTITAFLTSNSNATFMSDNTVVKTGEDFMASNQTAF-ATFINITDVDTGTP--------NTTNFQCEGEIDKPIDCTDPEVFHLIMKVAIEQFKDIHFYRFGKPVRGSNDSSCHMAWLFRPKEGKTAAFYKDYRSFVISRSEN------------CTLSVVRIGNYHSGGNARKRKKTQKPGFEKMPPAEQEQQVISLPVVGETINDTLPVVESEGSFSRGRYLFYAGGGDRCKSMNHYLWSFMCALGEAQYLNRTLVMDLSICLSSIYTSSKQDEEGKDFRFYFDFEHLKESSSVLDQDQFWSDWNKWQQKDGLSLYLVEDLKFTPMKLSGVKDTLIMRKFGSVEPDNYWYRVCEGETESVVQRPWHMIWKSRRLMDIVSAIASRLNWDFDSVHVVRGEKAVNKELWPNLAADTSPEALLSTFQDKIEDGRNVYIATTEPDTSFFDPLKDKYSTHFLNEYKDLWDENSEWYSETTKLNNGVPVEFDDYMRVSVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSAAS 564
BLAST of DCAR_021084 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A103Y3V8 ((Uncharacterized protein {ECO:0000313|EMBL:KVI02051.1}))
HSP 1 Score: 957.592 bits (2474), Expect = 0.000e+0
Identity = 447/584 (76.54%), Postives = 508/584 (86.99%), Query Frame = 0
Match: A0A103Y3V8 ((Uncharacterized protein {ECO:0000313|EMBL:KVI02051.1}))
HSP 1 Score: 957.592 bits (2474), Expect = 0.000e+0
Identity = 447/584 (76.54%), Postives = 508/584 (86.99%), Query Frame = 0
Query: 1 MWGRSTLSRTGSFRPENLGQNALAMIGNLCFTLFVLVVLVFTIIAATYEPEDPLFHPSSKITNFLTSDLNATFKSDSTVVKTGEDFMAPNQTVFETTFINVTDVNLGVPLREDINADEVTPFECESQMGKPIDCTDPAVFNLLMTSAIEEFKDIHFYRFGKPVRGYNDSSCHMAWRFRPKEGKTAAFYKDYRSFVIHRSDNCTCSFVIHRSDNCTLSVVRIGDYHSGGNARKRKRNQRPGFEKPQMNQEQQGAALPVVGEFVNDTLPAIETEGSFSSGKYLLYDGGGERCKSMDHYLWSFMCALGEAQYLNRTLVMDMSICLSSIYTSSGQDEEQKDFRYYFDFEHLKESASVLDRTQFWVDWNKWHQKDGLALFLVDDVKITPMKLADVQDTLVMRKFGLNEPDNYWYRVCEGEAESVIQRPWHMIWKSRRLMDIVSAIATKLNWDFDSVHVVRGEKARNLELWPNLAADTAPEALISTLQEKVDEGRNLYIATDEPDTSFFDPLKDKFSTHFLDEYKELWDENSEWYSETMKLNSGVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSTAS 584
M GR SR+GSFRPENLGQNALA+IGNLCFT FV+ VLVFTIIAATYEPEDPLFHPS+K+TNFLTS NATF SDSTVVKTGEDFM N+T + + IN +DV V D A E+ +C ++ KPIDCTDP VF+L+MT+AIE+FKDIHFYRFGKPVRG NDSSCHMAWRFRPKEGKTA+ YKDYRSFVI RS+N C+LSVV IGDYHSGGNARKRKR+Q+PGFEK M ++ + + + VVGE VND+LP +E+E SF G+YLLY+GGGERCKSMDHYLWSFMCALGEAQYLNRTLVMD+SICLSS+YT+SGQDEE KDFR+YFDFEHLKESA+VLD+ QFW DWNKWHQKDGL++ LV+D+++TPMK+A V+DTL+MRKFG EPDNYWYRVCEGEAESVIQRPWHMIWKSRRLMDIVSAIA K+NWDFDSVHVVRGEKA+N E WPNLAADT+P+AL+S+LQ+KVD+GRNLYIATDEPD SFFDPLKDK+STHFLDEYK WDENSEWYSE KLN+GVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDG+NTCS+++
Sbjct: 2 MLGRGLPSRSGSFRPENLGQNALALIGNLCFTFFVIGVLVFTIIAATYEPEDPLFHPSTKLTNFLTSTSNATFVSDSTVVKTGEDFMTANETAYGKS-INASDVINPVTSEGDAEAAEIEARDCSGEIDKPIDCTDPEVFHLMMTAAIEQFKDIHFYRFGKPVRGMNDSSCHMAWRFRPKEGKTASLYKDYRSFVISRSEN------------CSLSVVSIGDYHSGGNARKRKRHQKPGFEKTPMGEDDKSSGIQVVGESVNDSLPVVESEKSFDQGRYLLYNGGGERCKSMDHYLWSFMCALGEAQYLNRTLVMDLSICLSSVYTASGQDEEGKDFRFYFDFEHLKESAAVLDQGQFWSDWNKWHQKDGLSISLVEDIRVTPMKMAGVKDTLIMRKFGSVEPDNYWYRVCEGEAESVIQRPWHMIWKSRRLMDIVSAIAAKMNWDFDSVHVVRGEKAKNREQWPNLAADTSPDALLSSLQDKVDDGRNLYIATDEPDISFFDPLKDKYSTHFLDEYKGFWDENSEWYSEMTKLNNGVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDGINTCSSSA 572
BLAST of DCAR_021084 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6QEH6 ((Craniofacial development protein {ECO:0000313|EMBL:PSS06475.1}))
HSP 1 Score: 956.436 bits (2471), Expect = 0.000e+0
Identity = 453/584 (77.57%), Postives = 510/584 (87.33%), Query Frame = 0
Match: A0A2R6QEH6 ((Craniofacial development protein {ECO:0000313|EMBL:PSS06475.1}))
HSP 1 Score: 956.436 bits (2471), Expect = 0.000e+0
Identity = 453/584 (77.57%), Postives = 510/584 (87.33%), Query Frame = 0
Query: 1 MWGRSTLSRTGSFRPENLGQNALAMIGNLCFTLFVLVVLVFTIIAATYEPEDPLFHPSSKITNFLTSDLNATFKSDSTVVKTGEDFMAPNQTVFETTFINVTDVNLGVPLREDINADEVTPFECESQMGKPIDCTDPAVFNLLMTSAIEEFKDIHFYRFGKPVRGYNDSSCHMAWRFRPKEGKTAAFYKDYRSFVIHRSDNCTCSFVIHRSDNCTLSVVRIGDYHSGGNARKRKRNQRPGFEKPQMNQEQQGAALPVVGEFVNDTLPAIETEGSFSSGKYLLYDGGGERCKSMDHYLWSFMCALGEAQYLNRTLVMDMSICLSSIYTSSGQDEEQKDFRYYFDFEHLKESASVLDRTQFWVDWNKWHQKDGLALFLVDDVKITPMKLADVQDTLVMRKFGLNEPDNYWYRVCEGEAESVIQRPWHMIWKSRRLMDIVSAIATKLNWDFDSVHVVRGEKARNLELWPNLAADTAPEALISTLQEKVDEGRNLYIATDEPDTSFFDPLKDKFSTHFLDEYKELWDENSEWYSETMKLNSGVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSTAS 584
M GR+ LSRTGSFRPENLGQNAL MIGNLCFT+FV+ VLVFT+IAATYEPEDPLFHPS+K+T FLTS NATF+SD+TVVKTGEDFM NQT F TFIN+TDV+ G VT ECE ++ KPIDCTDP VF+L+M +AIE+FKDIHFYRFGKPVRG N+SSCHMAWRFRPKEGKTAAFYKDYRSFVI +S+NCTL+VVRIG+YHSGGNARKRK+NQ+PGFEK QE Q +LP VGE VND+LP +E+EGSFS G+YL+Y GGG+RCKSM+HYLWSFMCALGEAQYLNRTLVMD+SICLSSIYT+S QDEE KDFR+YFDFEHLKE ASVLD+ QFW DWN+WHQKDGL+L LV+D +ITPMKL V+D L+MRKFG EPDNYWYRVCEGE ESV+QRPWH+IWKS+RLMDIVSAIA+KLNWDFDSVH+VRGEKARN ELWPNL ADT+PEAL+STL +K+D+GRNLYIATDEPDTSFFDPLKDK+STHFLDEYK+LWDENSEWYSET KLN+GV VEFDGYMR+SVDTEVFLRGKKQIETFNDLT+DCKDGVNTCS+AS
Sbjct: 1 MLGRNPLSRTGSFRPENLGQNALQMIGNLCFTIFVVGVLVFTVIAATYEPEDPLFHPSTKLTTFLTSTSNATFRSDTTVVKTGEDFMTANQTAF-ATFINITDVDNG--------ETPVTSTECEGEVDKPIDCTDPEVFHLMMKAAIEQFKDIHFYRFGKPVRGSNESSCHMAWRFRPKEGKTAAFYKDYRSFVI-------------KSENCTLNVVRIGEYHSGGNARKRKKNQKPGFEKKPEKQESQPVSLPEVGEAVNDSLPVVESEGSFSRGRYLIYVGGGDRCKSMNHYLWSFMCALGEAQYLNRTLVMDLSICLSSIYTTSQQDEEGKDFRFYFDFEHLKELASVLDQGQFWSDWNEWHQKDGLSLHLVEDFRITPMKLTGVKDALIMRKFGDVEPDNYWYRVCEGETESVVQRPWHLIWKSKRLMDIVSAIASKLNWDFDSVHIVRGEKARNKELWPNLDADTSPEALLSTLPDKIDDGRNLYIATDEPDTSFFDPLKDKYSTHFLDEYKDLWDENSEWYSETTKLNNGVSVEFDGYMRSSVDTEVFLRGKKQIETFNDLTKDCKDGVNTCSSAS 562
BLAST of DCAR_021084 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0G3N4 ((Uncharacterized protein {ECO:0000313|EMBL:GFZ05378.1}))
HSP 1 Score: 955.281 bits (2468), Expect = 0.000e+0
Identity = 451/584 (77.23%), Postives = 510/584 (87.33%), Query Frame = 0
Match: A0A7J0G3N4 ((Uncharacterized protein {ECO:0000313|EMBL:GFZ05378.1}))
HSP 1 Score: 955.281 bits (2468), Expect = 0.000e+0
Identity = 451/584 (77.23%), Postives = 510/584 (87.33%), Query Frame = 0
Query: 1 MWGRSTLSRTGSFRPENLGQNALAMIGNLCFTLFVLVVLVFTIIAATYEPEDPLFHPSSKITNFLTSDLNATFKSDSTVVKTGEDFMAPNQTVFETTFINVTDVNLGVPLREDINADEVTPFECESQMGKPIDCTDPAVFNLLMTSAIEEFKDIHFYRFGKPVRGYNDSSCHMAWRFRPKEGKTAAFYKDYRSFVIHRSDNCTCSFVIHRSDNCTLSVVRIGDYHSGGNARKRKRNQRPGFEKPQMNQEQQGAALPVVGEFVNDTLPAIETEGSFSSGKYLLYDGGGERCKSMDHYLWSFMCALGEAQYLNRTLVMDMSICLSSIYTSSGQDEEQKDFRYYFDFEHLKESASVLDRTQFWVDWNKWHQKDGLALFLVDDVKITPMKLADVQDTLVMRKFGLNEPDNYWYRVCEGEAESVIQRPWHMIWKSRRLMDIVSAIATKLNWDFDSVHVVRGEKARNLELWPNLAADTAPEALISTLQEKVDEGRNLYIATDEPDTSFFDPLKDKFSTHFLDEYKELWDENSEWYSETMKLNSGVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSTAS 584
M GR+ LSRTGSFRPENLGQNAL MIGNLCFT+FV+ VLVFT+IAATYEPEDPLFHPS+K+T FLTS NATF+SD+T+VKTGEDFM NQT F TFIN+TDV+ G VT ECE ++ KPIDCTDP VF+L+M +AIE+FKDIHFYRFGKPVRG N+SSCHMAWRFRPKEGKTAAFYKDYRSFVI +S+NCTL+VVRIG+YHSGGNARKRK+NQ+PGFEK QE Q +LP VGE VND+LP +E+EGS+S G+YL+Y GGG+RCKSM+HYLWSFMCALGEAQYLNRTLVMD+SICLSSIYT+S QDEE KDFR+YFDFEHLKE ASVLD+ QFW DWN+WHQKDGL+L LV+D +ITPMKL V+D L+MRKFG EPDNYWYRVCEGE ESV+QRPWH+IWKS+RLMDIVSAIA+KLNWDFDSVH+VRGEKARN ELWPNL ADT+PEAL+STL +K+D+GRNLYIATDEPDTSFFDPLKDK+STHFLDEYK+LWDENSEWYSET KLN+GV VEFDGYMR+SVDTEVFLRGKKQIETFNDLT+DCKDGVNTCS+AS
Sbjct: 1 MLGRNPLSRTGSFRPENLGQNALQMIGNLCFTIFVVGVLVFTVIAATYEPEDPLFHPSTKLTTFLTSTSNATFRSDTTIVKTGEDFMTANQTAF-ATFINITDVDNG--------ETPVTSTECEGEVDKPIDCTDPEVFHLMMKAAIEQFKDIHFYRFGKPVRGSNESSCHMAWRFRPKEGKTAAFYKDYRSFVI-------------KSENCTLNVVRIGEYHSGGNARKRKKNQKPGFEKKPEKQESQPVSLPEVGEAVNDSLPVVESEGSYSRGRYLIYVGGGDRCKSMNHYLWSFMCALGEAQYLNRTLVMDLSICLSSIYTTSQQDEEGKDFRFYFDFEHLKELASVLDQGQFWSDWNEWHQKDGLSLHLVEDFRITPMKLTGVKDALIMRKFGDVEPDNYWYRVCEGETESVVQRPWHLIWKSKRLMDIVSAIASKLNWDFDSVHIVRGEKARNKELWPNLDADTSPEALLSTLPDKIDDGRNLYIATDEPDTSFFDPLKDKYSTHFLDEYKDLWDENSEWYSETTKLNNGVSVEFDGYMRSSVDTEVFLRGKKQIETFNDLTKDCKDGVNTCSSAS 562
BLAST of DCAR_021084 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6QWF4 ((Shikimate dehydrogenase like {ECO:0000313|EMBL:PSS16067.1}))
HSP 1 Score: 942.954 bits (2436), Expect = 0.000e+0
Identity = 446/578 (77.16%), Postives = 502/578 (86.85%), Query Frame = 0
HSP 2 Score: 354.755 bits (909), Expect = 2.332e-110
Identity = 180/267 (67.42%), Postives = 204/267 (76.40%), Query Frame = 0
Match: A0A2R6QWF4 ((Shikimate dehydrogenase like {ECO:0000313|EMBL:PSS16067.1}))
HSP 1 Score: 942.954 bits (2436), Expect = 0.000e+0
Identity = 446/578 (77.16%), Postives = 502/578 (86.85%), Query Frame = 0
Query: 7 LSRTGSFRPENLGQNALAMIGNLCFTLFVLVVLVFTIIAATYEPEDPLFHPSSKITNFLTSDLNATFKSDSTVVKTGEDFMAPNQTVFETTFINVTDVNLGVPLREDINADEVTPFECESQMGKPIDCTDPAVFNLLMTSAIEEFKDIHFYRFGKPVRGYNDSSCHMAWRFRPKEGKTAAFYKDYRSFVIHRSDNCTCSFVIHRSDNCTLSVVRIGDYHSGGNARKRKRNQRPGFEKPQMNQEQQGAALPVVGEFVNDTLPAIETEGSFSSGKYLLYDGGGERCKSMDHYLWSFMCALGEAQYLNRTLVMDMSICLSSIYTSSGQDEEQKDFRYYFDFEHLKESASVLDRTQFWVDWNKWHQKDGLALFLVDDVKITPMKLADVQDTLVMRKFGLNEPDNYWYRVCEGEAESVIQRPWHMIWKSRRLMDIVSAIATKLNWDFDSVHVVRGEKARNLELWPNLAADTAPEALISTLQEKVDEGRNLYIATDEPDTSFFDPLKDKFSTHFLDEYKELWDENSEWYSETMKLNSGVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSTAS 584
L GSFRPENLGQNAL MIGNLCFT+FV+ VLVFTIIAATYEPEDPLFHPS+K+T FLTS NATFKSD+TVVKTGEDFM+ NQT F T IN+TDV+ G VT ECE ++ KPIDCTDP VF+L+M +AIE+FKDIHFYRFGKPV G ++ SCHMAWRFRPKEGKTAAFYKDYRSFVI RS+NCTLSVV IG+YHSGGNARKRK+NQ+PGFEK QE Q +LP +GE VND+LP +E+EGSFS G+YL+Y GGG+RCKSM+HYLWSFMCALGEAQYLNRTLVMD+SICLSSIYT+S QDEE+KDFR+YFDFEHLKE ASVLD+ QFW DWN+WHQKDGL+L LV+D +ITPMKLA V+D L+MRKFG EPDNYWYRVCEGE ESV+QRPWH+IWKS+RLMDIVSAIA+KL+WDFDSVH+ RGEKARN ELWPNL ADT+PEAL+STL +K+D+GRNLYIATDEPDTSFFDPLKDK+STHFLDEYK+LWDENSEWYSET KLN+GVPVEFDGYMR+SVDTEVFLRGKKQIETFNDLTRDCKDGVNTCS+AS
Sbjct: 234 LKNVGSFRPENLGQNALQMIGNLCFTIFVVGVLVFTIIAATYEPEDPLFHPSTKLTTFLTSTSNATFKSDTTVVKTGEDFMSANQTAF-ATLINITDVDNG--------ETPVTSTECEVEVDKPIDCTDPEVFHLMMKAAIEQFKDIHFYRFGKPVHGLDEISCHMAWRFRPKEGKTAAFYKDYRSFVI-------------RSENCTLSVVHIGEYHSGGNARKRKKNQKPGFEKKPEKQESQPVSLPEIGEAVNDSLPVVESEGSFSRGRYLIYVGGGDRCKSMNHYLWSFMCALGEAQYLNRTLVMDLSICLSSIYTTSRQDEERKDFRFYFDFEHLKELASVLDQGQFWSDWNEWHQKDGLSLHLVEDFRITPMKLAGVKDALIMRKFGDVEPDNYWYRVCEGETESVLQRPWHLIWKSKRLMDIVSAIASKLHWDFDSVHIARGEKARNKELWPNLDADTSPEALLSTLPDKIDDGRNLYIATDEPDTSFFDPLKDKYSTHFLDEYKDLWDENSEWYSETTKLNNGVPVEFDGYMRSSVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSSAS 789
HSP 2 Score: 354.755 bits (909), Expect = 2.332e-110
Identity = 180/267 (67.42%), Postives = 204/267 (76.40%), Query Frame = 0
Query: 1 MWGRSTLSRTGSFRPENLGQNALAMIGNLCFTLFVLVVLVFTIIAATYEPEDPLFHPSSKITNFLTSDLNATFKSDSTVVKTGEDFMAPNQTVFETTFINVTDVNLGVPLREDINADEVTPFECESQMGKPIDCTDPAVFNLLMTSAIEEFKDIHFYRFGKPVRGYNDSSCHMAWRFRPKEGKTAAFYKDYRSFVIHRSDNCTCSFVIHRSDNCTLSVVRIGDYHSGGNARKRKRNQRPGFE-KPQMNQEQQGAALPVVGEFVNDTL 266
M GR+ LSRT SFRPENLGQNAL MIGNLCFT+FV+ VLVFTIIAATYEPEDPLFHPS+K+T FLTS NATFKSD+TVVKTGEDFM+ NQT F T IN+TDV+ G VT ECE ++ KPIDCTDP VF+L+M +AIE+FKDIHFYRFGKPV G ++ SCHMAWRFRPKEGKTAAFYKDYRSFVI RS+NCTLSVV IG+YHSGGNARKRK+NQ+PGFE KP+ + L VG F + L
Sbjct: 1 MLGRNLLSRTRSFRPENLGQNALQMIGNLCFTIFVVGVLVFTIIAATYEPEDPLFHPSTKLTTFLTSTSNATFKSDTTVVKTGEDFMSANQTAF-ATLINITDVDNG--------ETPVTSTECEVEVDKPIDCTDPEVFHLMMKAAIEQFKDIHFYRFGKPVHGLDEISCHMAWRFRPKEGKTAAFYKDYRSFVI-------------RSENCTLSVVHIGEYHSGGNARKRKKNQKPGFEKKPEKQESXSDFCLKNVGSFRPENL 245
BLAST of DCAR_021084 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2J6JYA7 ((Uncharacterized protein {ECO:0000313|EMBL:PLY67792.1}))
HSP 1 Score: 939.488 bits (2427), Expect = 0.000e+0
Identity = 441/584 (75.51%), Postives = 504/584 (86.30%), Query Frame = 0
Match: A0A2J6JYA7 ((Uncharacterized protein {ECO:0000313|EMBL:PLY67792.1}))
HSP 1 Score: 939.488 bits (2427), Expect = 0.000e+0
Identity = 441/584 (75.51%), Postives = 504/584 (86.30%), Query Frame = 0
Query: 1 MWGRSTLSRTGSFRPENLGQNALAMIGNLCFTLFVLVVLVFTIIAATYEPEDPLFHPSSKITNFLTSDLNATFKSDSTVVKTGEDFMAPNQTVFETTFINVTDVNLGVPLREDINADEVTPFECESQMGKPIDCTDPAVFNLLMTSAIEEFKDIHFYRFGKPVRGYNDSSCHMAWRFRPKEGKTAAFYKDYRSFVIHRSDNCTCSFVIHRSDNCTLSVVRIGDYHSGGNARKRKRNQRPGFEKPQMNQEQQGAALPVVGEFVNDTLPAIETEGSFSSGKYLLYDGGGERCKSMDHYLWSFMCALGEAQYLNRTLVMDMSICLSSIYTSSGQDEEQKDFRYYFDFEHLKESASVLDRTQFWVDWNKWHQKDGLALFLVDDVKITPMKLADVQDTLVMRKFGLNEPDNYWYRVCEGEAESVIQRPWHMIWKSRRLMDIVSAIATKLNWDFDSVHVVRGEKARNLELWPNLAADTAPEALISTLQEKVDEGRNLYIATDEPDTSFFDPLKDKFSTHFLDEYKELWDENSEWYSETMKLNSGVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDGVNTCSTAS 584
M GRS SR+GSFRPENLGQNALA+IGN+ FT FV+ VLVFTIIAATYEPEDPLFHPS+KITNFLTS NATF SDSTVVKTGEDFM N+T F TFIN +DV + +E +C ++ KPIDCTDP VF+L+M++AI++FKDIHFYRFGKPVRG NDSSCHMAWRFRPKEGKTA+ YKDYRSFVI RS NC+ LSVV IGDYHSGGNARKRK++Q+PGFEK M ++ + + + VVGE VND+LP +E+E SF GKYLLY+GGGERCKSMDHYLWSFMCALGEAQYLNRTLVMD+SICLSS+YT SGQDEE KDFR+YFDFEHLKESASVLD+ QFW DWNKWHQKDGL++ LV+D ++TPMK+A V+DTL+MRKFG EPDNYWYRVCEGEAESVIQRPWHMIWKS RLM+IVS+I++K+NWDFDSVHVVRGEKA+N E WPNLA+DT+PEAL+S+LQ+KVD+GRNLYIATDE D SFFDPLKDK+STHFLDEY+ELWDENSEWYSE KLN+GVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDG+NTC+ ++
Sbjct: 2 MLGRSLPSRSGSFRPENLGQNALALIGNVFFTFFVIGVLVFTIIAATYEPEDPLFHPSTKITNFLTSTSNATFVSDSTVVKTGEDFMKANETAF-GTFINASDVIKAAKWDAEGETEEKEARDCSDEVDKPIDCTDPEVFHLMMSAAIDQFKDIHFYRFGKPVRGMNDSSCHMAWRFRPKEGKTASLYKDYRSFVISRSVNCS------------LSVVSIGDYHSGGNARKRKKHQKPGFEKTPMGEDDKNSGIQVVGETVNDSLPVVESEKSFDQGKYLLYNGGGERCKSMDHYLWSFMCALGEAQYLNRTLVMDLSICLSSVYTKSGQDEEGKDFRFYFDFEHLKESASVLDQGQFWSDWNKWHQKDGLSISLVEDFRVTPMKMAHVKDTLIMRKFGSVEPDNYWYRVCEGEAESVIQRPWHMIWKSTRLMNIVSSISSKMNWDFDSVHVVRGEKAKNTEQWPNLASDTSPEALLSSLQDKVDDGRNLYIATDEQDVSFFDPLKDKYSTHFLDEYRELWDENSEWYSEMSKLNNGVPVEFDGYMRASVDTEVFLRGKKQIETFNDLTRDCKDGINTCTISA 572
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7AIM8 | E-Value: 0.000e+0, PID: 79.45 | (Uncharacterized protein {ECO:0000313|EMBL:MPA5595... [more] |
| A0A5J5A4N4 | E-Value: 0.000e+0, PID: 79.28 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8524... [more] |
| A0A5J5A812 | E-Value: 0.000e+0, PID: 78.90 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8526... [more] |
| A0A5B7AJJ4 | E-Value: 0.000e+0, PID: 79.17 | (Uncharacterized protein {ECO:0000313|EMBL:MPA5595... [more] |
| A0A5B7BPR0 | E-Value: 0.000e+0, PID: 78.29 | (Uncharacterized protein {ECO:0000313|EMBL:MPA7093... [more] |
| A0A103Y3V8 | E-Value: 0.000e+0, PID: 76.54 | (Uncharacterized protein {ECO:0000313|EMBL:KVI0205... [more] |
| A0A2R6QEH6 | E-Value: 0.000e+0, PID: 77.57 | (Craniofacial development protein {ECO:0000313|EMB... [more] |
| A0A7J0G3N4 | E-Value: 0.000e+0, PID: 77.23 | (Uncharacterized protein {ECO:0000313|EMBL:GFZ0537... [more] |
| A0A2R6QWF4 | E-Value: 2.332e-110, PID: 77.16 | (Shikimate dehydrogenase like {ECO:0000313|EMBL:PS... [more] |
| A0A2J6JYA7 | E-Value: 0.000e+0, PID: 75.51 | (Uncharacterized protein {ECO:0000313|EMBL:PLY6779... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |