Resource Type:
Polypeptide
Name:
DCAR_023618
Identifier:
DCAR_023618.mRNA-protein
Sequence:
MATPSSSSSPATQIMLAIYEKKTTAVDLYRPLRNYIVYNYSEREAQNLED
DLQTLKQYRTDIERSSPSDSLSSRRDLLINYFRALTAIESRFPISPETDH
INTLTFVWHDAFKNKLKASQQNIHLEKAAVLFNLGAVHSQLGLGFDRGEV
EGRKNASHSFMKAAGVFAFLRDNVAMKACMGNSTTLDVSVECVGMLERLM
LAQAQECVFENTIAKGSSASVCSKISRQVGIFYEEALAALKVAPLSQHFE
KAWHSHVQLKAALFYAEACYRYGLELHEKEEIGEEIARLKSGLNALSEAR
KSSPKGAAQQLIDAYTILEGNLNRNLERAVKENDRVYLMRVPPASSLQPL
PAFQMVKTMPMTEVFDASKEKMFASLVPDSSAKALSRYTEMVDDVIRTQA
EILQQGSELTRVRLKEMDLPESILALEGHSALPTALKEDDRLNRFAANLK
QAAESDTRIERSVREHSSLMSILDRHPIESVLPTLGRPIMSLDANEDAIL
GALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFRK
EISKYDQICQEIGKNVEAQEHLLLQIQAQSNEFAAVFNIEDYKASREKCF
KQIEAAIAKYQEIKENINEGLKFYVTLQDAITNMKQQCSDFVMTRSIQCR
EMIEEVQRQMAGLSFQDSKNTGNYNYPAVGQANQPQRTSSQQTKAGNIPQ
QSHPQSQPYYSAPQQPNTSNIPQQSHPQSQPYYSPPQQQPPQQPNAPGYG
QPPPPYGSQQQQPPYHLPAARPPYTSPQNQQQPGVPHEYGQPAYPGWQGP
YYNAPGQQPGSMPRPPYTVPAPYPPPNQGGYYRQ*
Sequence Length:
835
Sequence Checksum:
ae0c101fc82b64bdfe3541df11109e8f
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_023618, derives from mRNA, DCAR_023618. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_023618 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_023618 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6KV10 (BRO1 domain-containing protein {ECO:0000259|PROSITE:PS51180})
HSP 1 Score: 1077.77 bits (2786), Expect = 0.000e+0
Identity = 591/914 (64.66%), Postives = 686/914 (75.05%), Query Frame = 0
Match: A0A1J6KV10 (BRO1 domain-containing protein {ECO:0000259|PROSITE:PS51180})
HSP 1 Score: 1077.77 bits (2786), Expect = 0.000e+0
Identity = 591/914 (64.66%), Postives = 686/914 (75.05%), Query Frame = 0
Query: 1 MATPSSSSSPATQIMLAIYEKKTTAVDLYRPLRNYIVYNYSEREAQNLEDDLQTLKQYRTDIERSSPSDSLSSRRDLLINYFRALTAIESRFPISPETDHINTLTFVWHDAFKNKLKASQQNIHLEKAAVLFNLGAVHSQLGLGFDRGEVEGRKNASHSFMKAAGVFAFLRDNVAMKACMGNSTTLDVSVECVGMLERLMLAQAQECVFENTIAKGSSASVCSKISRQVGIFYEEALAALKVAPLSQHFEKAWHSHVQLKAALFYAEACYRYGLELHEKEEIGEEIARLKSGLNALSEARKSSPKGAAQQLIDAYTILEGNLNRNLERAVKENDRVYLMRVPPASSLQPLPAFQMVKTMPMTEVFDASKEKMFASLVPD------------------SSAKALSRYTEMV----------DDVIRTQAEI-------------------------LQQGSELTRVRLKEMDLPESILALEG------------------HSALPTALKEDDRLNRFAANLKQAAESDTRIERSVREHSSLMSILDRHPIESVLPTLGRPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFRKEISKYDQICQEIGKNVEAQEHLLLQIQAQSNEFAAVFNIEDYKASREKCFKQIEAAIAKYQEIKENINEGLKFYVTLQDAITNMKQQCSDFVMTRSIQCREMIEEVQRQMAGLSFQDSKNTGNYNYPAVGQANQPQRTSSQ-QTKAGNIPQQSHPQSQPYYSAPQQPNTSNIPQQSHPQSQPYYSPPQQQPPQQPNAPGYGQ-PPPPYGSQQQQPPYHLPAARPPYTSPQNQQQPGVPHEYGQPAYPGWQGPYYNA------PGQQPGSMPRPPYTVPAPY-PPPNQGGYYRQ 834
MA+PSS++ AT +MLAI+EKKT ++DLYRPLRNYI +NYSEREAQNLEDDLQTLKQYR++IER P+DSL +RRD+L NY++AL A+ESRFPISP+ DHIN++ F W+D FKNK KA QQNIHLEKAAVLFNLGAVHSQ+GL DR VEGR+ ASHSF+ AAG FAFLRDNVAMKA MG+STT+D+SVEC GMLERLMLAQAQECVFENTIAKGS+ VC+KISRQ GI+YEEALAAL VAPL+ HF+K W +HVQLKAALFYAEACYRYG+ELH+KEEI EEIARLKSG++ALSEA+K+SP+GAAQQL+DA LE NLN+NL RAVKENDRVYLMRVP ASSL PLPAF +VK MPM +V DASKEKMFASLVPD S A+ L R +E+ D ++ + + LQQ +L RV + + E +L E S L L+ DRLNRFA NLKQAAESD RIERSVR+H++LMSILDRHPIES LPTL RPIMSLDANEDAI GALKQSLRQLE LGAQRAGLEDMLKEMKRKDDILPKLMTSTGS++DLFRKEI+KYD IC+EI +N+EAQE LLLQIQ Q+ +FA++FN+EDYKASRE+ +KQIEAAI+KY+EIKENINEGLKFYVTLQDAITN+KQQCSDFVMTR+IQCREM++EVQRQ++GLSFQD+K + YNY +V Q++Q R++ Q T N+P PQ+ P Y PQQP + PQQP PGY Q PPP QQ PPYHL A+ PPY PQ+QQQP H+YGQPAYPGW+GPYYN P QQPGSMPRPPYTVP+PY PPP+Q GYYRQ
Sbjct: 1 MASPSSTA--ATNVMLAIFEKKTVSLDLYRPLRNYIAFNYSEREAQNLEDDLQTLKQYRSEIERV-PADSLPARRDILQNYYKALCAVESRFPISPDKDHINSVFFTWYDTFKNKQKAVQQNIHLEKAAVLFNLGAVHSQMGLSLDRSAVEGRRQASHSFIAAAGAFAFLRDNVAMKASMGSSTTVDMSVECAGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQAGIYYEEALAALNVAPLNYHFDKGWLAHVQLKAALFYAEACYRYGMELHDKEEIAEEIARLKSGISALSEAKKTSPRGAAQQLLDAINKLEANLNQNLARAVKENDRVYLMRVPQASSLAPLPAFSLVKPMPMNDVLDASKEKMFASLVPDNSAKALSRYTEMVDDVIRSQAERLQRGSELARVRLREMDLPDSILALEGNLTLPMALKEDVEAVQVCGGPAGLEAELQQLKDLKRVNQELLVQTEELLQKEATEDSQFRSQFGTRWTRPQSSTLTKNLQ--DRLNRFAGNLKQAAESDARIERSVRDHAALMSILDRHPIESALPTLARPIMSLDANEDAIAGALKQSLRQLEGLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSHEDLFRKEIAKYDHICEEIAQNLEAQEQLLLQIQTQNEDFASIFNLEDYKASRERIYKQIEAAISKYREIKENINEGLKFYVTLQDAITNVKQQCSDFVMTRNIQCREMMDEVQRQISGLSFQDNKGSNGYNYTSVPQSHQVPRSNPQPPTDPANMPNAVRPQT-PTYHPPQQPAMAG-------------------NPQQPTMPGYTQNPPPYGPPQQPTPPYHLQASGPPYPPPQHQQQPPPSHDYGQPAYPGWRGPYYNVPPQQPAPPQQPGSMPRPPYTVPSPYHPPPHQSGYYRQ 889
BLAST of DCAR_023618 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7XC76 ((ALG-2 interacting protein X-like {ECO:0000313|RefSeq:XP_009788473.1}))
HSP 1 Score: 1075.85 bits (2781), Expect = 0.000e+0
Identity = 594/914 (64.99%), Postives = 686/914 (75.05%), Query Frame = 0
Match: A0A1U7XC76 ((ALG-2 interacting protein X-like {ECO:0000313|RefSeq:XP_009788473.1}))
HSP 1 Score: 1075.85 bits (2781), Expect = 0.000e+0
Identity = 594/914 (64.99%), Postives = 686/914 (75.05%), Query Frame = 0
Query: 1 MATPSSSSSPATQIMLAIYEKKTTAVDLYRPLRNYIVYNYSEREAQNLEDDLQTLKQYRTDIERSSPSDSLSSRRDLLINYFRALTAIESRFPISPETDHINTLTFVWHDAFKNKLKASQQNIHLEKAAVLFNLGAVHSQLGLGFDRGEVEGRKNASHSFMKAAGVFAFLRDNVAMKACMGNSTTLDVSVECVGMLERLMLAQAQECVFENTIAKGSSASVCSKISRQVGIFYEEALAALKVAPLSQHFEKAWHSHVQLKAALFYAEACYRYGLELHEKEEIGEEIARLKSGLNALSEARKSSPKGAAQQLIDAYTILEGNLNRNLERAVKENDRVYLMRVPPASSLQPLPAFQMVKTMPMTEVFDASKEKMFASLVPD------------------SSAKALSRYTEMV----------DDVIRTQAEI-------------------------LQQGSELTRVRLKEMDLPESILALEG------------------HSALPTALKEDDRLNRFAANLKQAAESDTRIERSVREHSSLMSILDRHPIESVLPTLGRPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFRKEISKYDQICQEIGKNVEAQEHLLLQIQAQSNEFAAVFNIEDYKASREKCFKQIEAAIAKYQEIKENINEGLKFYVTLQDAITNMKQQCSDFVMTRSIQCREMIEEVQRQMAGLSFQDSKNTGNYNYPAVGQANQPQRTSSQ-QTKAGNIPQQSHPQSQPYYSAPQQPNTSNIPQQSHPQSQPYYSPPQQQPPQQPNAPGYGQ-PPPPYGSQQQQPPYHLPAARPPYTSPQNQQQPGVPHEYGQPAYPGWQGPYYN------APGQQPGSMPRPPYTVPAPY-PPPNQGGYYRQ 834
MA+PSS++ AT +MLAI+EKKT ++DLYRPLRNYI +NYSEREAQNLEDDLQTLKQYR++IER P+ SL +RRD+L NY++AL A+ESRFPISP+ DHIN++ F W+D FKNK KA QQNIHLEKAAVLFNLGAVHSQ+GL DR VEGR+ ASHSF+ AAG FAFLRDNVAMKA MG+STT+D+SVEC GMLERLMLAQAQECVFENTIAKGS+ VC+KISRQ GI+YEEALAAL VAPL+ HF+K W +HVQLKAALFYAEACYRYG+ELH+KEEI EEIARLKSG++ALSEA+K+SPKGAAQQL+DA LE NLN+NL RAVKENDRVYLMRVP ASSL PLPAF +VK MPM +V DASKEKMFASLVPD S A+ L R +E+ D ++ + + LQQ +L RV + + E +L E S L L+ DRLNRFAANLKQAAESD RIERSVR+HS+LMSILDRHPIES LPTL RPIMSLDANEDAI GALKQSLRQLE LGAQRAGLEDMLKEMKRKDDILPKLMTSTGS++DLFRKEI+KYD IC+EI +N+EAQE LLLQIQ Q+ +FA++FN+EDYKASRE+ +KQIEAAI+KY+EIKENINEGLKFYVTLQDAITN+KQQCSDFVMTR+IQCREM++EVQRQ++GLSFQD+K + YNY +V Q++Q R++ Q T N+P PQ+ P Y PQQP + PQQP PGY Q PPP QQ PPYHL A+ PPY PQ+QQQP HEYGQPAYPGW+GPYYN AP QQPGSMPRPPYTVP+PY PP +Q GYYRQ
Sbjct: 1 MASPSSTA--ATNVMLAIFEKKTVSLDLYRPLRNYIAFNYSEREAQNLEDDLQTLKQYRSEIERV-PAASLPARRDILQNYYKALCAVESRFPISPDKDHINSVFFTWYDTFKNKQKAVQQNIHLEKAAVLFNLGAVHSQMGLSLDRSAVEGRRQASHSFIAAAGAFAFLRDNVAMKASMGSSTTVDMSVECAGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQAGIYYEEALAALNVAPLNYHFDKGWLAHVQLKAALFYAEACYRYGMELHDKEEIAEEIARLKSGISALSEAKKTSPKGAAQQLLDAINKLEANLNQNLARAVKENDRVYLMRVPQASSLAPLPAFSLVKPMPMNDVLDASKEKMFASLVPDNSAKALSRYTEMVDDVIRSQAERLQRGSELARVRLREMDLPDSILALEGNLTLPMALKEDVEAVQVCGGPAGLEAELQQLKDLKRVNQELLVQTEELLQKEATEDSQFRSQFGTRWTRPQSSTLTKNLQ--DRLNRFAANLKQAAESDARIERSVRDHSALMSILDRHPIESALPTLARPIMSLDANEDAIAGALKQSLRQLEGLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSHEDLFRKEIAKYDHICEEIAQNLEAQEQLLLQIQTQNEDFASIFNLEDYKASRERIYKQIEAAISKYREIKENINEGLKFYVTLQDAITNVKQQCSDFVMTRNIQCREMMDEVQRQISGLSFQDNKGSNGYNYTSVPQSHQVPRSNPQPPTDPANMPNAVRPQT-PTYHPPQQPAMAG-------------------NPQQPTMPGYTQNPPPYGPPQQPTPPYHLQASGPPYPPPQHQQQPPPNHEYGQPAYPGWRGPYYNAPPQQPAPPQQPGSMPRPPYTVPSPYHPPHHQSGYYRQ 889
BLAST of DCAR_023618 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A836DWE8 ((Hydroxyproline-rich glycoprotein {ECO:0000313|EMBL:KAG5240442.1}))
HSP 1 Score: 1065.45 bits (2754), Expect = 0.000e+0
Identity = 578/896 (64.51%), Postives = 658/896 (73.44%), Query Frame = 0
Match: A0A836DWE8 ((Hydroxyproline-rich glycoprotein {ECO:0000313|EMBL:KAG5240442.1}))
HSP 1 Score: 1065.45 bits (2754), Expect = 0.000e+0
Identity = 578/896 (64.51%), Postives = 658/896 (73.44%), Query Frame = 0
Query: 1 MATPSSSSSPATQIMLAIYEKKTTAVDLYRPLRNYIVYNYSEREAQNLEDDLQTLKQYRTDIERSSPSDSLSSRRDLLINYFRALTAIESRFPISPETDHINTLTFVWHDAFKNKLKASQQNIHLEKAAVLFNLGAVHSQLGLGFDRGEVEGRKNASHSFMKAAGVFAFLRDNVAMKACMGNSTTLDVSVECVGMLERLMLAQAQECVFENTIAKGSSASVCSKISRQVGIFYEEALAALKVAPLSQHFEKAWHSHVQLKAALFYAEACYRYGLELHEKEEIGEEIARLKSGLNALSEARKSSPKGAAQQLIDAYTILEGNLNRNLERAVKENDRVYLMRVPPASSLQPLPAFQMVKTMPMTEVFDASKEKMFASLVPDSSAKALSRYTEMVDDVIRTQAEILQQGSELTRVRLKEMDLPESILALEGHSALPTALKED---------------DRLNRFAANLKQAAESDTRIE-----RSVREHSSLM---------------------------SILDRHPIESV---------LPTLGRPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFRKEISKYDQICQEIGKNVEAQEHLLLQIQAQSNEFAAVFNIEDYKASREKCFKQIEAAIAKYQEIKENINEGLKFYVTLQDAITNMKQQCSDFVMTRSIQCREMIEEVQRQMAGLSFQDSKNTGNYNYPAVGQANQP-QRTSSQQTKAGNIPQQSHPQSQPYYSAPQQPNTSNIPQQSHPQSQPYYSPPQQQPPQQPNAPGYGQPPPPYGSQQQQPPYHLPA-ARPPYTSPQNQQQPGVPHEYGQPAYPGW----QGPYYNAPGQQPGSMPRPPYTVPAPYPPPNQGGYYRQ 834
MA SSS+S AT IMLA+YEKKTT++DLYRPLRNYI +SEREAQNLEDDLQT+KQYR+D+ER P S +SRRDLL YF+AL IE+RFPISP+ DHINT+TFVW+DAFK K KASQQNIHLEKAAVLFNLGAV+SQ+GL FDR VEGRK A H+F+ AAG FAFLRDN A KA MG STT+D+SVECVGMLERLMLAQAQECVFENTIAKGS+ VC+KISRQVG++YEEALAAL VA L HF+K W +HVQLKAALFYAEACYRY LELHEKEEI EEIARLKSG + LSE +KSS +GAA QL+DA + LE N+NRNL+RAVKENDR + PLPAF MVK MPM EV DASKEKMFASLVPDSSAKALSRYTEMVDD+IRTQAE LQQGSELTRVRLKEMDLP+SIL+LEG+ LPT LKED + L + L++ A D + R R SS + S+ D + S+ LP L RPIMSLDANEDAI+GALKQSLRQLETLGAQRAGLEDMLKEMKR KLMTSTGSY+DLFRKEI+KYD I ++I +N+EAQEHLLLQIQAQ+ EF+AVFN+EDYKASREKC+KQI+AAIAKY+EIKENINEGLKFYVTLQDAITN+KQQCSDFVMTR+IQCREMIE+VQRQMAGLSFQD KNTG+Y+YP+V NQP QR+SSQ P S P N+P HP+SQ Y QPP+Q P Y PP PY + QQ PPYH+PA P + + +PGV +P +GPYYNA GQQPGS+PRPPYT+P PYPP GYY+Q
Sbjct: 1 MAGQSSSASTATNIMLAVYEKKTTSLDLYRPLRNYISMFFSEREAQNLEDDLQTVKQYRSDLERQ-PDPSPTSRRDLLQKYFKALCLIETRFPISPDNDHINTVTFVWYDAFKQKQKASQQNIHLEKAAVLFNLGAVYSQIGLSFDRATVEGRKQAIHAFIAAAGSFAFLRDNAATKASMGTSTTVDLSVECVGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAALSVASLKDHFDKGWIAHVQLKAALFYAEACYRYSLELHEKEEIAEEIARLKSGSSMLSEVKKSS-RGAAAQLLDAISKLEANINRNLDRAVKENDRF----------ITPLPAFSMVKIMPMNEVLDASKEKMFASLVPDSSAKALSRYTEMVDDIIRTQAEKLQQGSELTRVRLKEMDLPDSILSLEGNFMLPTDLKEDVEALQQLMDLRRVNHELLVQTEELLQKEATEDAQFRSQFGTRWTRPQSSTLTKNLQDRLNRFAANLKQASDSDARIERSVRDHSALMSILDRRPIESALPALARPIMSLDANEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKR------KLMTSTGSYEDLFRKEIAKYDPIREDIAQNIEAQEHLLLQIQAQNEEFSAVFNLEDYKASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEDVQRQMAGLSFQDRKNTGSYSYPSV---NQPHQRSSSQ------------PPSDP----------QNVP---HPRSQTSY----YQPPEQSTVPAYAHPPSPYTTSQQPPPYHIPAPVLPTHPTGSTSNRPGV--------WPTCLSRVRGPYYNAHGQQPGSLPRPPYTIPGPYPP--HQGYYKQ 836
BLAST of DCAR_023618 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061E6I6 ((Endosomal targeting BRO1-like domain-containing protein {ECO:0000313|EMBL:EOX99976.1}))
HSP 1 Score: 1064.29 bits (2751), Expect = 0.000e+0
Identity = 580/895 (64.80%), Postives = 661/895 (73.85%), Query Frame = 0
Match: A0A061E6I6 ((Endosomal targeting BRO1-like domain-containing protein {ECO:0000313|EMBL:EOX99976.1}))
HSP 1 Score: 1064.29 bits (2751), Expect = 0.000e+0
Identity = 580/895 (64.80%), Postives = 661/895 (73.85%), Query Frame = 0
Query: 12 TQIMLAIYEKKTTAVDLYRPLRNYIVYNYSEREAQNLEDDLQTLKQYRTDIERSSPSDSLSSRRDLLINYFRALTAIESRFPISPETDHINTLTFVWHDAFKNKLKASQQNIHLEKAAVLFNLGAVHSQLGLGFDRGEVEGRKNASHSFMKAAGVFAFLRDNVAMKACMGNSTTLDVSVECVGMLERLMLAQAQECVFENTIAKGSSASVCSKISRQVGIFYEEALAALKVAPLSQHFEKAWHSHVQLKAALFYAEACYRYGLELHEKEEIGEEIARLKSGLNALSEARKSSPKGAAQQLIDAYTILEGNLNRNLERAVKENDRVYLMRVPPASSLQPLPAFQMVKTMPMTEVFDASKEKMFASLVPDSSAKALSRYTEMVDDV----------------------------------------IRTQAEI-------------LQQGSELTRVRLKEMDLPESILALEG------------------HSALPTALKEDDRLNRFAANLKQAAESDTRIERSVREHSSLMSILDRHPIESVLPTLGRPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFRKEISKYDQICQEIGKNVEAQEHLLLQIQAQSNEFAAVFNIEDYKASREKCFKQIEAAIAKYQEIKENINEGLKFYVTLQDAITNMKQQCSDFVMTRSIQCREMIEEVQRQMAGLSFQDSKNTGNYNYPAVGQANQPQRTSSQQTKAGNIPQQSHPQSQPYYSAPQQPNTSNIPQQSHPQSQ-PYYSPPQQQPPQQPNAPGYGQPPPPYGSQQQQPPYHLPAARPPYTSPQNQQQPGVPHEYGQPAYPGWQGPYYNAPGQQPGSMPRPPYTVPAPYPPPNQGGYYRQ 834
T IMLAIYEKKT ++DLYRPLR YI + YSEREA NLEDDL T+K R+DIER P S ++RRDLLI+YF++L IE+RFPISP+ DHINT+ F W DAFK K KA QQNIHLEKAAVLFNLGAV+SQ+GL +DR V+GR+ ASH+F+ +AG F FLRDN + KA MGNSTT+D+SVEC GMLERLMLAQAQECVFENTIAKGS+ VC+KISRQVG++YEEAL AL APL HF+KAW +HVQLKAALFYAEACYRY LELHEKEEI EEIARL+SG++AL EA+KSS KG A QL+DA + LE NLNRNLERAVKENDRVYLMRVP SSL PLPAF MVK+M M EV DASKEKMFASLVPDSSAKALSRYTEMVDDV ++ + EI LQQ +L RV + + E +L E S L L+E RLN+FAANLKQAAESD RIERSVREHS+ MSILDR PIE+ LP+L RPIMSLDANEDAI+GALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSY+DLFRKEI+KY+ IC+EI +N+EAQE LL+QIQAQ+ EF+AVFN+EDYKASR+KC+KQI+AA+AK +EIKENINEGLKFYVTLQDAI N+KQQCSDFVMTR+IQCREM+E+VQRQMAG SFQD KNTG Y P VGQ +Q R+SSQQ Q+ PQS SHP SQ PYY PP+Q P + P P QQ PYH+P + PY PQ QQQ V HEYGQPAYPGW+GPYYNAP QQPGS+PRPPYT+P PY P+Q GYY+Q
Sbjct: 13 TNIMLAIYEKKTNSIDLYRPLRQYISFTYSEREAVNLEDDLSTVKTLRSDIERM-PDPSPTTRRDLLISYFKSLCLIETRFPISPDKDHINTIQFTWFDAFKQKQKAVQQNIHLEKAAVLFNLGAVYSQIGLSYDRATVDGRRQASHAFIASAGTFGFLRDNASTKASMGNSTTVDLSVECAGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALGALNAAPLKDHFDKAWIAHVQLKAALFYAEACYRYSLELHEKEEIAEEIARLRSGVSALVEAKKSS-KGVAAQLLDAISKLEANLNRNLERAVKENDRVYLMRVPSPSSLPPLPAFAMVKSMQMNEVLDASKEKMFASLVPDSSAKALSRYTEMVDDVIRTQAEKLQQGSELARVRLKEMDLPDSILALEGNFNLPEDLKNEVEIVQASGGAAGLEAELQQLRDLRRVNQELLIQTEELLQKEAAEDAQFRSQFGTRWTRPQSSTLTKTLQE--RLNKFAANLKQAAESDARIERSVREHSTFMSILDRRPIEAALPSLSRPIMSLDANEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYEDLFRKEIAKYNHICEEITQNIEAQEQLLMQIQAQNQEFSAVFNLEDYKASRDKCYKQIQAAVAKCKEIKENINEGLKFYVTLQDAINNIKQQCSDFVMTRNIQCREMMEDVQRQMAGFSFQDRKNTGPY--PPVGQPHQTPRSSSQQ--------QTEPQSI-----------------SHPSSQTPYYRPPEQPMPGYGHPPPPYSAP------QQPSPYHIPPSAAPYPPPQAQQQAPVSHEYGQPAYPGWRGPYYNAPAQQPGSLPRPPYTIPNPY-HPHQSGYYKQ 869
BLAST of DCAR_023618 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9SNI4 ((ALG-2 interacting protein X {ECO:0000313|RefSeq:XP_011070676.1}))
HSP 1 Score: 1061.98 bits (2745), Expect = 0.000e+0
Identity = 575/907 (63.40%), Postives = 674/907 (74.31%), Query Frame = 0
Match: A0A6I9SNI4 ((ALG-2 interacting protein X {ECO:0000313|RefSeq:XP_011070676.1}))
HSP 1 Score: 1061.98 bits (2745), Expect = 0.000e+0
Identity = 575/907 (63.40%), Postives = 674/907 (74.31%), Query Frame = 0
Query: 1 MATPSSSSSPATQIMLAIYEKKTTAVDLYRPLRNYIVYNYSEREAQNLEDDLQTLKQYRTDIERSSPSDSLSSRRDLLINYFRALTAIESRFPISPETDHINTLTFVWHDAFKNKLKASQQNIHLEKAAVLFNLGAVHSQLGLGFDRGEVEGRKNASHSFMKAAGVFAFLRDNVAMKACMGNSTTLDVSVECVGMLERLMLAQAQECVFENTIAKGSSASVCSKISRQVGIFYEEALAALKVAPLSQHFEKAWHSHVQLKAALFYAEACYRYGLELHEKEEIGEEIARLKSGLNALSEARKSSPKGAAQQLIDAYTILEGNLNRNLERAVKENDRVYLMRVPPASS---------LQPLPAFQMV----KTMPMTEVFDASKEKM--FASLVPD---SSAKALSRYTEMV----------DDVIRTQAEI-------------------------LQQGSELTRVRLKEMDLPESILALEG------------------HSALPTALKEDDRLNRFAANLKQAAESDTRIERSVREHSSLMSILDRHPIESVLPTLGRPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFRKEISKYDQICQEIGKNVEAQEHLLLQIQAQSNEFAAVFNIEDYKASREKCFKQIEAAIAKYQEIKENINEGLKFYVTLQDAITNMKQQCSDFVMTRSIQCREMIEEVQRQMAGLSFQDSKN-TGNYNYPAVGQANQPQRTSS-QQTKAGNIPQQSHPQSQPYYSAPQQPNTSNIPQQSHPQSQPYYSPPQQQPPQQPNAPGYGQPPPPYGSQQQQPPYHLPAARPPYTSPQNQQQPGVPHEYGQPAYPGWQGPYYNAPGQQPGSMPRPPYTVPAPYPPPNQGGYYRQ 834
MA+PSS+++ T IMLAI+EKKT ++DLYRPLRN+IV NYSEREAQNLEDDL+TLKQ R D+ER SDS S+RRDLL NY++AL A+ESRFPISP+ DH+NT++F W DAFK K KASQQNIHLEKAAVLFNLGAVHSQ+GL FDR VEGR+ ASHSF+ AAG FAFLRDNVAMKA +G+STTLDVSVECVGMLERLMLAQAQECV+ENTIAKGSS VC+KISRQVG+FYEEALAAL VAPL+QHF+KAW +HVQLKAALFYAEACYRY LELH+KEEI EEIARLKSG+NALSEA+KSSP+GAAQQL+DA LE + NRNLERAVKENDRVYLMRVPPASS ++PLP +++ + M T V D+S + + + ++ D + A+ L + +E+ D ++ + + LQQ +L RV + + E L E S L L+ DRLNRFA NLKQAAESD RIERSVREHS+LMSILDR PIES LPTL +P+MSLDANEDA++GALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGS++DLFRKEISKYD IC+EI +N+EAQE LLL IQAQ+++FAA+FN+EDYKASREK +QIEAAIAK++EIKENINEGLKFYVTLQDAIT +KQQCSDFVMTRSIQCR+MI++VQRQ++GLSFQD K+ T +++P+ G QR++S QQ GN+P SHPQ Y Q + + Q+ PY S QQQPP PPYH P + PY SPQ+ Q P V HEYGQPAYPGW+GPYYNAP QQPGSMPRPPYTVP+PYPP NQ GYYRQ
Sbjct: 1 MASPSSTTT--TNIMLAIFEKKTNSLDLYRPLRNFIVINYSEREAQNLEDDLETLKQLRFDVERGGASDSPSARRDLLQNYYKALCAVESRFPISPDADHVNTVSFTWFDAFKTKQKASQQNIHLEKAAVLFNLGAVHSQMGLSFDRSAVEGRRQASHSFIAAAGAFAFLRDNVAMKASVGSSTTLDVSVECVGMLERLMLAQAQECVYENTIAKGSSPGVCAKISRQVGLFYEEALAALSVAPLNQHFDKAWIAHVQLKAALFYAEACYRYSLELHDKEEIAEEIARLKSGVNALSEAKKSSPRGAAQQLLDAINKLETSSNRNLERAVKENDRVYLMRVPPASSLAPLPTFSMVKPLPMNEVLDASKEKMFATLVPDSSAKALSRYTEMLDDIIRTQAEKLQQGSELARVRLKEMDLPDSILALEGNLTLPTALKEDVEAVQICGGPAGLEGELQQLKDLRRVNHELLVQIEEQLQKEAMEDSQFRNQFGTRWTRPQSSTLTKNLQ--DRLNRFAGNLKQAAESDARIERSVREHSALMSILDRRPIESALPTLAKPMMSLDANEDAVVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSHEDLFRKEISKYDSICEEIAQNLEAQEQLLLHIQAQNDQFAAIFNLEDYKASREKGCRQIEAAIAKFREIKENINEGLKFYVTLQDAITIVKQQCSDFVMTRSIQCRDMIDDVQRQISGLSFQDGKSTTSGHSFPSAGPPYHSQRSNSQQQLDVGNMPNSSHPQPPAYQPPQQPIAS------GYAQT-PYGS--QQQPP---------------------PPYHAPVS-GPYPSPQH-QPPAVSHEYGQPAYPGWRGPYYNAPAQQPGSMPRPPYTVPSPYPPHNQSGYYRQ 871
BLAST of DCAR_023618 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A836IR45 ((Hydroxyproline-rich glycoprotein {ECO:0000313|EMBL:KAG5240450.1}))
HSP 1 Score: 1057.36 bits (2733), Expect = 0.000e+0
Identity = 587/906 (64.79%), Postives = 666/906 (73.51%), Query Frame = 0
Match: A0A836IR45 ((Hydroxyproline-rich glycoprotein {ECO:0000313|EMBL:KAG5240450.1}))
HSP 1 Score: 1057.36 bits (2733), Expect = 0.000e+0
Identity = 587/906 (64.79%), Postives = 666/906 (73.51%), Query Frame = 0
Query: 1 MATPSSSSSPATQIMLAIYEKKTTAVDLYRPLRNYIVYNYSEREAQNLEDDLQTLKQYRTDIERSSPSDSLSSRRDLLINYFRALTAIESRFPISPETDHINTLTFVWHDAFKNKLKASQQNIHLEKAAVLFNLGAVHSQLGLGFDRGEVEGRKNASHSFMKAAGVFAFLRDNVAMKACMGNSTTLDVSVECVGMLERLMLAQAQECVFENTIAKGSSASVCSKISRQVGIFYEEALAALKVAPLSQHFEKAWHSHVQLKAALFYAEACYRYGLELHEKEEIGEEIARLKSGLNALSEARKSSPKGAAQQLIDAYTILEGNLNRNLERAVKENDRVYLMRVPPASSLQPLPAFQMVKTMPM---------------------------TEVFD------ASKEKMFASL---------VPDSSAKALSRY---TEMVDDVIRTQ--------AEILQQGSELTRVRLKEMDLPESILALEG------------------HSALPTALKEDDRLNRFAANLKQAAESDTRIERSVREHSSLMSILDRHPIESVLPTLGRPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFRKEISKYDQICQEIGKNVEAQEHLLLQIQAQSNEFAAVFNIEDYKASREKCFKQIEAAIAKYQEIKENINEGLKFYVTLQDAITNMKQQCSDFVMTRSIQCREMIEEVQRQMAGLSFQDSKNTGNYNYPAVGQANQP-QRTSSQQTKAGNIPQQSHPQSQPYYSAPQQPNTSNIPQQSHPQSQPYYSPPQQQPPQQPNAPGYGQPPPPYGSQQQQPPYHLPAARPPYTSPQNQQQPGVPHEYGQPAYPGWQGPYYNAPGQQPGSMPRPPYTVPAPYPPPNQGGYYRQ 834
MA SSS+S AT IMLA+YEKKTT++DLYRPLRNYI +SEREAQNLEDDLQT+KQYR+D+ER P S +SRRDLL YF+AL IE+RFPISP+ DHINT+TFVW+DAFK K KASQQNIHLEKAAVLFNLGAV+SQ+GL FDR VEGRK A H+F+ AAG FAFLRDN A KA MG STT+D+SVECVGMLERLMLAQAQECVFENTIAKGS+ VC+KISRQVG++YEEALAAL VA L HF+K W +HVQLKAALFYAEACYRY LELHEKEEI EEIARLKSG + LSE +KSS +GAA QL+DA + LE N+NRNL+RAVKENDRVYLMRVP SSL PLPAF MVK MPM TE+ D A K + + L +PDS + T++ +DV Q A LQQ +L RV + + E +L E S L L+ DRLNRFAANLKQA++SD RIERSVR+HS+LMSILDR PIES LP L RPIMSLDANEDAI+GALKQSLRQLETLGAQRAGLEDMLKEMKRKDD+LPKLMTSTGSY+DLFRKEI+KYD I ++I +N+EAQEHLLLQIQAQ+ EF+AVFN+EDYKASREKC+KQI+AAIAKY+EIKENINEGLKFYVTLQDAITN+KQQCSDFVMTR+IQCREMIE+VQRQMAGLSFQD KNTG+Y+YPAV NQP QR+SSQ P S P N+P HP+SQ Y QPP+Q P Y PP PY + QQ PPYH+PA PY PQ Q G EYGQPAYPGW+GPYYNA GQQPGS+PRPPYT+P PYPP GYY+Q
Sbjct: 1 MAGQSSSASTATNIMLAVYEKKTTSLDLYRPLRNYISMFFSEREAQNLEDDLQTVKQYRSDLERQ-PDPSPTSRRDLLQKYFKALCLIETRFPISPDNDHINTVTFVWYDAFKQKQKASQQNIHLEKAAVLFNLGAVYSQIGLSFDRATVEGRKQAIHAFIAAAGSFAFLRDNAATKASMGTSTTVDLSVECVGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAALSVASLKDHFDKGWIAHVQLKAALFYAEACYRYSLELHEKEEIAEEIARLKSGSSMLSEVKKSS-RGAAAQLLDAISKLEANINRNLDRAVKENDRVYLMRVPSPSSLPPLPAFSMVKIMPMNEVLDASKEKMFASLVPDSSAKALSRYTEMVDDIIRTQAEKLQQGSELTRVRLKEMDLPDSILSLEGNFMLPTDLKEDVEAVQISGGPAGLAAELQQLMDLRRVNHELLVQTEELLQKEATEDAQFRSQFGTRWTRPQSSTLTKNLQ--DRLNRFAANLKQASDSDARIERSVRDHSALMSILDRRPIESALPALARPIMSLDANEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDVLPKLMTSTGSYEDLFRKEIAKYDPIREDIAQNIEAQEHLLLQIQAQNEEFSAVFNLEDYKASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEDVQRQMAGLSFQDRKNTGSYSYPAV---NQPHQRSSSQ------------PPSDP----------QNVP---HPRSQTSY----YQPPEQSTVPAYAHPPSPYTTSQQPPPYHIPAPGAPYPPPQAQHPTG--QEYGQPAYPGWRGPYYNAHGQQPGSLPRPPYTIPGPYPP--HQGYYKQ 866
BLAST of DCAR_023618 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6N2MX59 (BRO1 domain-containing protein {ECO:0000259|PROSITE:PS51180})
HSP 1 Score: 1054.66 bits (2726), Expect = 0.000e+0
Identity = 585/906 (64.57%), Postives = 666/906 (73.51%), Query Frame = 0
Match: A0A6N2MX59 (BRO1 domain-containing protein {ECO:0000259|PROSITE:PS51180})
HSP 1 Score: 1054.66 bits (2726), Expect = 0.000e+0
Identity = 585/906 (64.57%), Postives = 666/906 (73.51%), Query Frame = 0
Query: 1 MATPSSSSSPATQIMLAIYEKKTTAVDLYRPLRNYIVYNYSEREAQNLEDDLQTLKQYRTDIERSSPSDSLSSRRDLLINYFRALTAIESRFPISPETDHINTLTFVWHDAFKNKLKASQQNIHLEKAAVLFNLGAVHSQLGLGFDRGEVEGRKNASHSFMKAAGVFAFLRDNVAMKACMGNSTTLDVSVECVGMLERLMLAQAQECVFENTIAKGSSASVCSKISRQVGIFYEEALAALKVAPLSQHFEKAWHSHVQLKAALFYAEACYRYGLELHEKEEIGEEIARLKSGLNALSEARKSSPKGAAQQLIDAYTILEGNLNRNLERAVKENDRVYLMRVPPASSLQPLPAFQMVKTMPM---------------------------TEVFD------ASKEKMFASL---------VPDSSAKALSRY---TEMVDDVIRTQ--------AEILQQGSELTRVRLKEMDLPESILALEG------------------HSALPTALKEDDRLNRFAANLKQAAESDTRIERSVREHSSLMSILDRHPIESVLPTLGRPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFRKEISKYDQICQEIGKNVEAQEHLLLQIQAQSNEFAAVFNIEDYKASREKCFKQIEAAIAKYQEIKENINEGLKFYVTLQDAITNMKQQCSDFVMTRSIQCREMIEEVQRQMAGLSFQDSKNTGNYNYPAVGQANQP-QRTSSQQTKAGNIPQQSHPQSQPYYSAPQQPNTSNIPQQSHPQSQPYYSPPQQQPPQQPNAPGYGQPPPPYGSQQQQPPYHLPAARPPYTSPQNQQQPGVPHEYGQPAYPGWQGPYYNAPGQQPGSMPRPPYTVPAPYPPPNQGGYYRQ 834
MA SSS+S AT IMLA+YEKKTT++DLYRPLRNYI +SEREAQNLEDDLQT+KQYR+D+ER P S +SRRDLL YF+AL IE+RFPISP+ DHINT+TFVW+DAFK K KASQQNIHLEKAAVLFNLGAV+SQ+GL FDR VEGRK A H+F+ AAG FAFLRDN A KA MG STT+D+SVECVGMLERLMLAQAQECVFENTIAKGS+ VC+KISRQVG++YEEALAAL VA L HF+K W +HVQLKA+LFYAEACYRY LELHEKEEI EEIARLKSG + LSE +KSS +GAA QL+DA + LE N+NRNL+RAVKENDRVYLMRVP SSL PLPAF MVK MPM TE+ D A K + + L +PDS + T++ +DV Q A LQQ +L RV + + E +L E S L L+ DRLNRFAANLKQA++SD RIERSVR+HS+LMSILDR PIES LPTL RPIMS+DANEDAI+GALKQSLRQLETLGAQRAGLEDMLKEMKRKDD+LPKLMTSTGSY+DLFRKEI+KYD I ++I +N+EAQEHLLLQIQAQ+ EF+AVFN+EDYKASREKC+KQI+AAIAKY+EIKENINEGLKFYVTLQDAITN+KQQCSDFVMTR+IQCREMIE+VQRQMAGLSFQD KNTG+Y+YPAV NQP QR+SSQ P S P N+P HP+SQ Y QPP+Q P Y PP PY + QQ PPYH+PA PY PQ Q EYGQPAYPGW+GPYYNA GQQPGS+PRPPYT+P PYPP GYY+Q
Sbjct: 1 MAGQSSSASTATNIMLAVYEKKTTSLDLYRPLRNYISMFFSEREAQNLEDDLQTVKQYRSDLERQ-PDPSPTSRRDLLQKYFKALCLIETRFPISPDNDHINTVTFVWYDAFKQKQKASQQNIHLEKAAVLFNLGAVYSQIGLSFDRATVEGRKQAIHAFIAAAGSFAFLRDNAATKASMGTSTTVDLSVECVGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAALSVASLKDHFDKGWIAHVQLKASLFYAEACYRYSLELHEKEEIAEEIARLKSGSSMLSEVKKSS-RGAAAQLLDAISKLEANINRNLDRAVKENDRVYLMRVPSPSSLPPLPAFSMVKIMPMNEVLDASKEKMFASLVPDSSAKALSRYTEMVDDIIRTQAEKLQQGSELTRVRLKEMDLPDSILSLEGNFMLPTDLKEDVEAVQISGGPAGLAAELQQLMDLRRVNHELLVQTEELLQKEATEDAQFRSQFGTRWTRPQSSTLTKNLQ--DRLNRFAANLKQASDSDARIERSVRDHSALMSILDRRPIESALPTLARPIMSMDANEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDVLPKLMTSTGSYEDLFRKEIAKYDPIREDIAQNIEAQEHLLLQIQAQNEEFSAVFNLEDYKASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEDVQRQMAGLSFQDRKNTGSYSYPAV---NQPHQRSSSQ------------PPSDP----------QNVP---HPRSQTSY----YQPPEQSTVPAYAHPPSPYTTSQQPPPYHIPAPGAPYPPPQAQH--PTSQEYGQPAYPGWRGPYYNAHGQQPGSLPRPPYTIPGPYPP--HQGYYKQ 866
BLAST of DCAR_023618 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5E4G6M9 ((Full=PREDICTED: programmed cell {ECO:0000313|EMBL:VVA35465.1}))
HSP 1 Score: 1048.5 bits (2710), Expect = 0.000e+0
Identity = 579/909 (63.70%), Postives = 676/909 (74.37%), Query Frame = 0
Match: A0A5E4G6M9 ((Full=PREDICTED: programmed cell {ECO:0000313|EMBL:VVA35465.1}))
HSP 1 Score: 1048.5 bits (2710), Expect = 0.000e+0
Identity = 579/909 (63.70%), Postives = 676/909 (74.37%), Query Frame = 0
Query: 1 MATPSSSSSPATQIMLAIYEKKTTAVDLYRPLRNYIVYNYSEREAQNLEDDLQTLKQYRTDIERSSPSDSLSSRRDLLINYFRALTAIESRFPISPETDHINTLTFVWHDAFKNKLKASQQNIHLEKAAVLFNLGAVHSQLGLGFDRGEVEGRKNASHSFMKAAGVFAFLRDNVAMKACMGNSTTLDVSVECVGMLERLMLAQAQECVFENTIAKGSSASVCSKISRQVGIFYEEALAALKVAPLSQHFEKAWHSHVQLKAALFYAEACYRYGLELHEKEEIGEEIARLKSGLNALSEARKSSPKGAAQQLIDAYTILEGNLNRNLERAVKENDRVYLMRVPPASSLQPLPAFQMVKTMPMTE-------------VFDASKEKM--FASLVPD---------SSAKALSRY---------------------TEMVDDVIRTQ---------AEILQQGSELTRVRLKEMDLPESILALEGH------------------SALPTALKEDDRLNRFAANLKQAAESDTRIERSVREHSSLMSILDRHPIESVLPTLGRPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFRKEISKYDQICQEIGKNVEAQEHLLLQIQAQSNEFAAVFNIEDYKASREKCFKQIEAAIAKYQEIKENINEGLKFYVTLQDAITNMKQQCSDFVMTRSIQCREMIEEVQRQMAGLSFQDSKNTGNYN--YPAVGQANQPQRTSSQQTKAGNIPQQSHPQSQ-PYYSAPQQPNTSNIPQQSHPQSQPYYSPPQQQPPQQPNAPGYGQPPPPYGSQQQQPPYHLPAARPPYTSPQNQQQPGVPHEYGQPAYPGWQGPYYNAPGQQPGSMPRPPYTVPAPYPPPNQGGYYRQ 834
MA+ +S+S AT +MLAI+EKKTT ++LYRPLRNYI +NYSEREAQNLEDDLQT+KQ R+D+ER P SL++RRDLL NY++AL +E+RFPISP+ DHINT+TFVWHDAFKNK KASQQNIHLEKAAVLFNLGAV+SQ+GL +DR V+GR+ ASH+F+ +AG FAFLRDN A KA +G+STT+D+SVEC GMLERLMLAQAQECVFENTIAKGS+ VC+KISRQVG++YEEALAA V PL+QHF++AW SH+QLKAALFYAEACYRYGLELHEKEEI EEIARLKSG++ALSEA+KS+ KGAA Q++DA + LE NLNRNLERAVKENDRVYLMRVP SSL PLPAF MVK + M E V D+S + + + +V D A L+R T++ +DV Q AE LQQ +L RV + + E +L E S L L+ DRLNRFAANLKQAA+SD RIERSVREHS+LMSILDR PIES LPTL RPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSY+DLFRKEISKYD IC++I +N+EAQE LLLQIQAQ++EFAA+FN+EDYKASREKC+KQI+AAIAK++EIK+NINEGLKFYVTLQDAITN+KQQCSDFVMTR+IQC+EMIE+V +QMAGL+FQD+K+TG YN YP+VG +Q QR SQ QQ+ P+ Q PYY P+QP + +HP P YS QQ P P G PY Q PY P A PY PQ QQQP H+YGQPAYPGW+GPYYN+ QQ GS PRPPYT+P Y PP QGGYY+Q
Sbjct: 1 MASSASTSGTATNVMLAIFEKKTTQIELYRPLRNYIAFNYSEREAQNLEDDLQTVKQLRSDLERQ-PDPSLTTRRDLLQNYYKALCLVETRFPISPDKDHINTITFVWHDAFKNKQKASQQNIHLEKAAVLFNLGAVYSQIGLSYDRATVDGRRLASHAFIASAGAFAFLRDNAATKASIGSSTTVDLSVECAGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAACNVPPLNQHFDRAWISHMQLKAALFYAEACYRYGLELHEKEEIAEEIARLKSGISALSEAKKST-KGAAAQILDAISKLEANLNRNLERAVKENDRVYLMRVPSPSSLPPLPAFSMVKPLAMNEVLDASKEKMFASLVPDSSAKNLSRYTEMVDDIIRTQAEKLQQASELTRVRLKEMDLPESILALEGNFTLPTDLKEDVEAVQISGGPAGLEAE-LQQLRDLRRVNQEILIHIEELLQKEAREDAQFKSQFGARWTRPQSSTLTKNLQ--DRLNRFAANLKQAADSDARIERSVREHSALMSILDRRPIESALPTLARPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYEDLFRKEISKYDHICEDIAQNIEAQEQLLLQIQAQNDEFAAIFNLEDYKASREKCYKQIQAAIAKFREIKDNINEGLKFYVTLQDAITNVKQQCSDFVMTRNIQCQEMIEDVHKQMAGLNFQDAKSTGAYNNSYPSVG--HQAQRPVSQ--------QQTDPRPQTPYYHPPEQPAMAGY---AHP---PPYSSTQQMPSPYVLPPQTGS---PYAPSQAGSPYPPPQAGSPYPPPQAQQQPPANHDYGQPAYPGWRGPYYNSHAQQTGSHPRPPYTIPGQYRPPQQGGYYKQ 885
BLAST of DCAR_023618 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J5W752 (BRO1 domain-containing protein {ECO:0000259|PROSITE:PS51180})
HSP 1 Score: 1048.5 bits (2710), Expect = 0.000e+0
Identity = 578/908 (63.66%), Postives = 674/908 (74.23%), Query Frame = 0
Match: A0A6J5W752 (BRO1 domain-containing protein {ECO:0000259|PROSITE:PS51180})
HSP 1 Score: 1048.5 bits (2710), Expect = 0.000e+0
Identity = 578/908 (63.66%), Postives = 674/908 (74.23%), Query Frame = 0
Query: 1 MATPSSSSSPATQIMLAIYEKKTTAVDLYRPLRNYIVYNYSEREAQNLEDDLQTLKQYRTDIERSSPSDSLSSRRDLLINYFRALTAIESRFPISPETDHINTLTFVWHDAFKNKLKASQQNIHLEKAAVLFNLGAVHSQLGLGFDRGEVEGRKNASHSFMKAAGVFAFLRDNVAMKACMGNSTTLDVSVECVGMLERLMLAQAQECVFENTIAKGSSASVCSKISRQVGIFYEEALAALKVAPLSQHFEKAWHSHVQLKAALFYAEACYRYGLELHEKEEIGEEIARLKSGLNALSEARKSSPKGAAQQLIDAYTILEGNLNRNLERAVKENDRVYLMRVPPASSLQPLPAFQMVKTMPMTEVF-------------DASKEKM--FASLVPD---------SSAKALSRY---------------------TEMVDDVIRTQ---------AEILQQGSELTRVRLKEMDLPESILALEGH------------------SALPTALKEDDRLNRFAANLKQAAESDTRIERSVREHSSLMSILDRHPIESVLPTLGRPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFRKEISKYDQICQEIGKNVEAQEHLLLQIQAQSNEFAAVFNIEDYKASREKCFKQIEAAIAKYQEIKENINEGLKFYVTLQDAITNMKQQCSDFVMTRSIQCREMIEEVQRQMAGLSFQDSKNTGNYN-YPAVGQANQPQRTSSQQTKAGNIPQQSHPQSQ-PYYSAPQQPNTSNIPQQSHPQSQPYYSPPQQQPPQQPNAPGYGQPPPPYGSQQQQPPYHLPAARPPYTSPQNQQQPGVPHEYGQPAYPGWQGPYYNAPGQQPGSMPRPPYTVPAPYPPPNQGGYYRQ 834
MA+ +S+S AT +MLAI+EKKTT +DLYRPLRNYI +NYSEREAQNLEDDLQT+KQ R+D+ER P SL++RRDLL NY++AL +E+RFPISP+ DHIN++TFVWHDAFKNK KASQQNIHLEKAAVLFNLGAV+SQ+GL +DR V+GR+ ASH+F+ +AG FAFLRDN A KA +G STT+D+SVEC GMLERLMLAQAQECVFENTIAKGS+ VC+KISRQVG++YEEALAA V PL+QHF++AW SH+QLKAALFYAEACYRYGLELHEKEEI EEIARLKSG++ALSEA+KS+ KGAA Q++DA + LE NLNRNLERAVKENDRVYLMRVP SSL PLPAF MVK + M EV D+S + + + +V D A L+R T++ +DV Q AE LQQ +L RV + + E +L E S L L+ DRLNRFAANLKQAA+SD RIERSVREHS+LMSILDR PIES LPTL RPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSY+DLFRKEISKYD IC++I +N+EAQE LLLQIQAQ++EFAA+FN+EDYKASREKC+KQI+AAIAK++EIK+NINEGLKFYVTLQDAITN+KQQCSDFVMTR+IQC+EMIE+V +QMAGL+FQD+K+ G YN YP+VG +Q QR SQ QQ+ P+ Q PYY P+QP + +HP P YS QQ P P G PY Q PY P A PY PQ QQQP H+YGQPAYPGW+GPYYN+ QQ GS PRPPYT+P Y PP QGGYY+Q
Sbjct: 1 MASSASTSGTATNVMLAIFEKKTTQIDLYRPLRNYIAFNYSEREAQNLEDDLQTVKQLRSDLERQ-PDPSLTTRRDLLQNYYKALCLVETRFPISPDKDHINSITFVWHDAFKNKQKASQQNIHLEKAAVLFNLGAVYSQIGLSYDRATVDGRRLASHAFIASAGAFAFLRDNAATKASIGTSTTVDLSVECAGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAACNVPPLNQHFDRAWISHMQLKAALFYAEACYRYGLELHEKEEIAEEIARLKSGISALSEAKKST-KGAAAQILDAISKLEVNLNRNLERAVKENDRVYLMRVPSPSSLPPLPAFSMVKPLAMNEVLDASKEKMFASLVPDSSAKNLSRYTEMVDDIIRTQAEKLQQASELTRVRLKEMDLPESILALEGNFTLPTDLKEDVEAVQISGAPAGLEAE-LQQLRDLRRVNQEILIHIEELLQKEAREDAQFKSQFGARWTRPQSSTLTKNLQ--DRLNRFAANLKQAADSDARIERSVREHSALMSILDRRPIESALPTLARPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYEDLFRKEISKYDHICEDIAQNIEAQEQLLLQIQAQNDEFAAIFNLEDYKASREKCYKQIQAAIAKFREIKDNINEGLKFYVTLQDAITNVKQQCSDFVMTRNIQCQEMIEDVHKQMAGLNFQDAKSVGTYNSYPSVG--HQAQRPVSQ--------QQTDPRPQTPYYHPPEQPAMAGY---NHP---PPYSSTQQMPSPYVLPPQTGS---PYAPSQAGSPYPPPQAGSPYPPPQAQQQPPANHDYGQPAYPGWRGPYYNSHAQQAGSHPRPPYTIPGQYRPPQQGGYYKQ 884
BLAST of DCAR_023618 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M5Y1S7 (BRO1 domain-containing protein {ECO:0000259|PROSITE:PS51180})
HSP 1 Score: 1047.73 bits (2708), Expect = 0.000e+0
Identity = 579/909 (63.70%), Postives = 675/909 (74.26%), Query Frame = 0
Match: M5Y1S7 (BRO1 domain-containing protein {ECO:0000259|PROSITE:PS51180})
HSP 1 Score: 1047.73 bits (2708), Expect = 0.000e+0
Identity = 579/909 (63.70%), Postives = 675/909 (74.26%), Query Frame = 0
Query: 1 MATPSSSSSPATQIMLAIYEKKTTAVDLYRPLRNYIVYNYSEREAQNLEDDLQTLKQYRTDIERSSPSDSLSSRRDLLINYFRALTAIESRFPISPETDHINTLTFVWHDAFKNKLKASQQNIHLEKAAVLFNLGAVHSQLGLGFDRGEVEGRKNASHSFMKAAGVFAFLRDNVAMKACMGNSTTLDVSVECVGMLERLMLAQAQECVFENTIAKGSSASVCSKISRQVGIFYEEALAALKVAPLSQHFEKAWHSHVQLKAALFYAEACYRYGLELHEKEEIGEEIARLKSGLNALSEARKSSPKGAAQQLIDAYTILEGNLNRNLERAVKENDRVYLMRVPPASSLQPLPAFQMVKTMPMTE-------------VFDASKEKM--FASLVPD---------SSAKALSRY---------------------TEMVDDVIRTQ---------AEILQQGSELTRVRLKEMDLPESILALEGH------------------SALPTALKEDDRLNRFAANLKQAAESDTRIERSVREHSSLMSILDRHPIESVLPTLGRPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFRKEISKYDQICQEIGKNVEAQEHLLLQIQAQSNEFAAVFNIEDYKASREKCFKQIEAAIAKYQEIKENINEGLKFYVTLQDAITNMKQQCSDFVMTRSIQCREMIEEVQRQMAGLSFQDSKNTGNYN--YPAVGQANQPQRTSSQQTKAGNIPQQSHPQSQ-PYYSAPQQPNTSNIPQQSHPQSQPYYSPPQQQPPQQPNAPGYGQPPPPYGSQQQQPPYHLPAARPPYTSPQNQQQPGVPHEYGQPAYPGWQGPYYNAPGQQPGSMPRPPYTVPAPYPPPNQGGYYRQ 834
MA+ +S+S AT +MLAI+EKKTT +DLYRPLRNYI +NYSEREAQNLEDDLQT+KQ R+D+ER P SL++RRDLL NY++AL +E+RFPISP+ DHINT+TFVW DAFKNK KASQQNIHLEKAAVLFNLGAV+SQ+GL +DR V+GR+ ASH+F+ +AG FAFLRDN A KA +G+STT+D+SVEC GMLERLMLAQAQECVFENTIAKGS+ VC+KISRQVG++YEEALAA V PL+QHF++AW SH+QLKAALFYAEACYRYGLELHEKEEI EEIARLKSG++ALSEA+KS+ KGAA Q++DA + LE NLNRNLERAVKENDRVYLMRVP SSL PLPAF MVK + M E V D+S + + + +V D A L+R T++ +DV Q AE LQQ +L RV + + E +L E S L L+ DRLNRFAANLKQAA+SD RIERSVREHS+LMSILDR PIES LPTL RPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSY+DLFRKEISKYD IC++I +N+EAQE LLLQIQAQ++EFAA+FN+EDYKASREKC+KQI+AAIAK++EIK+NINEGLKFYVTLQDAITN+KQQCSDFVMTR+IQC+EMIE+V +QMAGL+FQD+K+TG YN YP+VG +Q QR SQ QQ+ P+ Q PYY P+QP + +HP P YS QQ P P G PY Q PY P A PY PQ QQQP H+YGQPAYPGW+GPYYN+ QQ GS PRPPYT+P Y PP QGGYY+Q
Sbjct: 1 MASSASTSGTATNVMLAIFEKKTTQIDLYRPLRNYIAFNYSEREAQNLEDDLQTVKQLRSDLERQ-PDPSLTTRRDLLQNYYKALCLVETRFPISPDKDHINTITFVWQDAFKNKQKASQQNIHLEKAAVLFNLGAVYSQIGLSYDRATVDGRRLASHAFIASAGAFAFLRDNAATKASIGSSTTVDLSVECAGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAACNVPPLNQHFDRAWISHMQLKAALFYAEACYRYGLELHEKEEIAEEIARLKSGISALSEAKKST-KGAAAQILDAISKLEANLNRNLERAVKENDRVYLMRVPSPSSLPPLPAFSMVKPLAMNEVLDASKEKMFASLVPDSSAKNLSRYTEMVDDIIRTQAEKLQQASELTRVRLKEMDLPESILALEGNFTLPTDLKEDVEAVQISGGPAGLEAE-LQQLRDLRRVNQEILIHIEELLQKEAREDAQFKSQFGARWTRPQSSTLTKNLQ--DRLNRFAANLKQAADSDARIERSVREHSALMSILDRRPIESALPTLARPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYEDLFRKEISKYDHICEDIAQNIEAQEQLLLQIQAQNDEFAAIFNLEDYKASREKCYKQIQAAIAKFREIKDNINEGLKFYVTLQDAITNVKQQCSDFVMTRNIQCQEMIEDVHKQMAGLNFQDAKSTGTYNNSYPSVG--HQAQRPVSQ--------QQTDPRPQTPYYHPPEQPAMAGY---AHP---PPYSSTQQMPSPYVLPPQTGS---PYAPSQAGSPYPPPQAGSPYPPPQAQQQPPANHDYGQPAYPGWRGPYYNSHAQQAGSHPRPPYTIPGQYRPPQQGGYYKQ 885
| Match Name | Stats | Description |
|---|---|---|
| A0A1J6KV10 | E-Value: 0.000e+0, PID: 64.66 | BRO1 domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A1U7XC76 | E-Value: 0.000e+0, PID: 64.99 | (ALG-2 interacting protein X-like {ECO:0000313|Ref... [more] |
| A0A836DWE8 | E-Value: 0.000e+0, PID: 64.51 | (Hydroxyproline-rich glycoprotein {ECO:0000313|EMB... [more] |
| A0A061E6I6 | E-Value: 0.000e+0, PID: 64.80 | (Endosomal targeting BRO1-like domain-containing p... [more] |
| A0A6I9SNI4 | E-Value: 0.000e+0, PID: 63.40 | (ALG-2 interacting protein X {ECO:0000313|RefSeq:X... [more] |
| A0A836IR45 | E-Value: 0.000e+0, PID: 64.79 | (Hydroxyproline-rich glycoprotein {ECO:0000313|EMB... [more] |
| A0A6N2MX59 | E-Value: 0.000e+0, PID: 64.57 | BRO1 domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A5E4G6M9 | E-Value: 0.000e+0, PID: 63.70 | (Full=PREDICTED: programmed cell {ECO:0000313|EMBL... [more] |
| A0A6J5W752 | E-Value: 0.000e+0, PID: 63.66 | BRO1 domain-containing protein {ECO:0000259|PROSIT... [more] |
| M5Y1S7 | E-Value: 0.000e+0, PID: 63.70 | BRO1 domain-containing protein {ECO:0000259|PROSIT... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |