Resource Type:
Polypeptide
Name:
DCAR_031209
Identifier:
DCAR_031209.mRNA-protein
Sequence:
MDSTQVESDHGITSRSGSTSMEVASSSSVYKSSRKNLGLYFMESDEGRRT
PFAGGYITGGGGGGGGTTPVDIQRKPISEQRLSKTGGWLAAFFIFGNEMT
ERMAYFGLSINMVAFMFYVMHRPFSSSANAVNNFLGISQASSVFGGFLAD
AYLGRYWTIAIFSTIYLAGLTGITLSATMNILVPKQDDCSQFALLLGNCE
SARPWQMFYLYTVLYITGFGAAGIRPCVSSFGADQFDERSQNYKSHLDRY
FNLFYLCVTLGAIVAFTAIVYIQIKHGWGFAFGTLAIAMGISNMLFFLGT
PLYRHRLPGGSPLTRVAQVLVAAFHKRNVSFDTTELIGLYELPGNRSAIK
GSTKIPHSNDFRCLDKAALQLKDDGGDCQVPSPWKLCTVTQVEEVKILIK
LLPIPACTIMLSLILTEFLTLSVQQAYTLNTYMGHLKLPVTCMPVFPGLS
IFLLLSLYYTVFVPLSKRITGNPHGASQLQRVGIGLGLSILSVAWAAVFE
RFRRNYAIEHGFEASFLSPMPDLSAYWLLIQYCLIGLAEVFCIVGLLEFL
YQEAPDAMRSIGSAYAALAGGLGCFAATALNSIINSATGDQEKRKISWLS
QNINNGRFDYLYWLLTAMSLINFFIFLYCARRYQYRRKHTGAAGGIEIAT
GEAV*
Sequence Length:
655
Sequence Checksum:
3770cf622b245dcbcec1e8d1c06f86c7
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_031209, derives from mRNA, DCAR_031209. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_031209 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_031209 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A830BGP4 ((Protein nrt1/ ptr family 6.1 {ECO:0000313|EMBL:GFP83065.1}))
HSP 1 Score: 1043.49 bits (2697), Expect = 0.000e+0
Identity = 494/639 (77.31%), Postives = 564/639 (88.26%), Query Frame = 0
Match: A0A830BGP4 ((Protein nrt1/ ptr family 6.1 {ECO:0000313|EMBL:GFP83065.1}))
HSP 1 Score: 1043.49 bits (2697), Expect = 0.000e+0
Identity = 494/639 (77.31%), Postives = 564/639 (88.26%), Query Frame = 0
Query: 1 MDSTQVESDHGITSRSGSTSMEVASSSSVYKSSRKNLGLYFMESDEGRRTPFAGGYITGGGGGGGGTTPVDIQRKPISEQRLSKTGGWLAAFFIFGNEMTERMAYFGLSINMVAFMFYVMHRPFSSSANAVNNFLGISQASSVFGGFLADAYLGRYWTIAIFSTIYLAGLTGITLSATMNILVPKQDDCSQFALLLGNCESARPWQMFYLYTVLYITGFGAAGIRPCVSSFGADQFDERSQNYKSHLDRYFNLFYLCVTLGAIVAFTAIVYIQIKHGWGFAFGTLAIAMGISNMLFFLGTPLYRHRLPGGSPLTRVAQVLVAAFHKRNVSFDTTELIGLYELPGNRSAIKGSTKIPHSNDFRCLDKAALQLKDDGGDCQVPSPWKLCTVTQVEEVKILIKLLPIPACTIMLSLILTEFLTLSVQQAYTLNTYMGHLKLPVTCMPVFPGLSIFLLLSLYYTVFVPLSKRITGNPHGASQLQRVGIGLGLSILSVAWAAVFERFRRNYAIEHGFEASFLSPMPDLSAYWLLIQYCLIGLAEVFCIVGLLEFLYQEAPDAMRSIGSAYAALAGGLGCFAATALNSIINSATGDQEKRKISWLSQNINNGRFDYLYWLLTAMSLINFFIFLYCARRYQYRRKH 639
M + +++S + + S S+E+ +S S RK LG+YF+ESD+ RRT GGY TGG TPV+I KP+SE +SKTGGW+AAFFIFGNEM ERMAYFGLS+NMVAFMFY+MH+PF +SANAVNNFLGISQASSV GGFLADAYLGRYWTIAIF+TIYLAGLTGITL ATMN+L+P Q +C QFALLLGNCE A+PWQM YLY VLY+TGFGAAGIRPCVSSFGADQFDERS++YK HLDR+FN FYL VT+GAIVAFTA+VYIQIKHGWG AFG+LAIAMG+SN++FFLGTPLYRHRLPGGSPLTRVAQVLVAAF KRN +F+++E +GLYELPG RSAIKGS+KI H+ DFRCLDKAAL+LK+DG D P+PW+LCTVTQVEE+KIL+KL+PIPACTIML+LILTE+LTLSVQQAYTLNT+MG LKLPVTCMPVFPGLSIFLLLSLYY+VFVPLS++ITG+PHGASQLQRVGIGL +SILSVAWA VFER+RR YAIEHG+EASFL+PM +LSAYWLLIQYCLIG+AEVFCIVGLLEFLY+EAPDAMRSIGSAYAA+AGGLGCFAAT LN+I+ S TGD EKRK SWLSQN+N GRFDY YWLLT MS++NF +FLY A RYQYR KH
Sbjct: 1 MGAREIKSPEVMADTTPSVSLEIINSES---HKRKRLGMYFLESDD-RRTALGGGYSTGGA------TPVNIHGKPLSEVTMSKTGGWIAAFFIFGNEMAERMAYFGLSVNMVAFMFYIMHQPFENSANAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMNVLMPNQANCDQFALLLGNCEPAKPWQMLYLYIVLYVTGFGAAGIRPCVSSFGADQFDERSKDYKDHLDRFFNFFYLSVTVGAIVAFTAVVYIQIKHGWGSAFGSLAIAMGMSNLVFFLGTPLYRHRLPGGSPLTRVAQVLVAAFRKRNAAFESSEFVGLYELPGKRSAIKGSSKIVHTEDFRCLDKAALKLKEDGAD---PTPWRLCTVTQVEEIKILLKLIPIPACTIMLNLILTEYLTLSVQQAYTLNTHMGRLKLPVTCMPVFPGLSIFLLLSLYYSVFVPLSRKITGHPHGASQLQRVGIGLAVSILSVAWAGVFERYRRRYAIEHGYEASFLTPMQELSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMRSIGSAYAAVAGGLGCFAATILNNIVKSVTGDLEKRKPSWLSQNVNTGRFDYFYWLLTVMSVVNFCVFLYAAHRYQYRAKH 626
BLAST of DCAR_031209 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9TQI0 ((protein NRT1/ PTR FAMILY 6.1 {ECO:0000313|RefSeq:XP_011086904.1}))
HSP 1 Score: 1035.02 bits (2675), Expect = 0.000e+0
Identity = 497/640 (77.66%), Postives = 556/640 (86.88%), Query Frame = 0
Match: A0A6I9TQI0 ((protein NRT1/ PTR FAMILY 6.1 {ECO:0000313|RefSeq:XP_011086904.1}))
HSP 1 Score: 1035.02 bits (2675), Expect = 0.000e+0
Identity = 497/640 (77.66%), Postives = 556/640 (86.88%), Query Frame = 0
Query: 1 MDSTQVESDHGITSRSGSTSMEVASSSSVYKSSRKNLGLYFMESDEGRRTPFAGGYITGGGGGGGGTTPVDIQRKPISEQRLSKTGGWLAAFFIFGNEMTERMAYFGLSINMVAFMFYVMHRPFSSSANAVNNFLGISQASSVFGGFLADAYLGRYWTIAIFSTIYLAGLTGITLSATMNILVPKQDDCSQFALLLGNCESARPWQMFYLYTVLYITGFGAAGIRPCVSSFGADQFDERSQNYKSHLDRYFNLFYLCVTLGAIVAFTAIVYIQIKHGWGFAFGTLAIAMGISNMLFFLGTPLYRHRLPGGSPLTRVAQVLVAAFHKRNVSFDTTELIGLYELPGNRSAIKGSTKIPHSNDFRCLDKAALQLKDDGGDCQVPSPWKLCTVTQVEEVKILIKLLPIPACTIMLSLILTEFLTLSVQQAYTLNTYMGHLKLPVTCMPVFPGLSIFLLLSLYYTVFVPLSKRITGNPHGASQLQRVGIGLGLSILSVAWAAVFERFRRNYAIEHGFEASFLSPMPDLSAYWLLIQYCLIGLAEVFCIVGLLEFLYQEAPDAMRSIGSAYAALAGGLGCFAATALNSIINSATGDQEKRKISWLSQNINNGRFDYLYWLLTAMSLINFFIFLYCARRYQYRRKHT 640
MD+ ++ S + S V+ ++V K LG+YF+ESD+ RRT GGY +G TPV+I KPISE +SKTGGW+AAFFIFGNEM ERMAYFGLS+NMVAFMFYVMHRPF SSANAVNNFLGISQASSV GGFLADAYLGRYWTIAIF+TIYLAGLTGITL ATMN L+P QD C Q ALLLGNCE A+PWQM YLYTVLYITGFGAAGIRPCVSSFGADQFDERS++YK HLDR+FN FYL VT+GAIVAFTA+VYIQ+KHGWG AFG+LAIAMG+SN++FFLGTPLYRHRLPGGSPLTRVAQVLVAAF KRN SF +E +GLYELPG RSAIKGS+KIPH+ DFRCLDKAAL+L++DG PSPW LCTVTQVEE+KIL+KL+PIPACTIML+LILTE+LTLSVQQAYTLNT+MGHLKLPVTCMPVFPGLSIFLLLSLYY+VFVPLS+RITG+PHGASQLQRVGIGL +SILSVAWA +FER+RR+YA+EHG+EASFL+PMPDLSAYWLLIQYCLIG+AEVFCIVGLLEFLY+EAPDAMRSIGSAYAA+AGGLGCFAAT LN+I+ S TGD EKRK SWLSQN+N G FDY YWLLT MS+INF +FL ARRYQYR K
Sbjct: 1 MDAREIRSPELLPEAS-----PVSLEANVESHRGKRLGIYFLESDD-RRTALGGGYTSGA-------TPVNIHGKPISEFTISKTGGWIAAFFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFESSANAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMNNLMPNQDKCDQIALLLGNCEPAKPWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSRDYKEHLDRFFNFFYLSVTVGAIVAFTAVVYIQMKHGWGSAFGSLAIAMGMSNLVFFLGTPLYRHRLPGGSPLTRVAQVLVAAFRKRNASFQNSEFVGLYELPGQRSAIKGSSKIPHTEDFRCLDKAALRLQEDGVS---PSPWMLCTVTQVEEIKILLKLVPIPACTIMLNLILTEYLTLSVQQAYTLNTHMGHLKLPVTCMPVFPGLSIFLLLSLYYSVFVPLSRRITGHPHGASQLQRVGIGLAVSILSVAWAGIFERYRRHYAVEHGYEASFLTPMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMRSIGSAYAAVAGGLGCFAATILNNIVKSVTGDVEKRKPSWLSQNVNTGHFDYFYWLLTVMSVINFCVFLLAARRYQYRAKQV 624
BLAST of DCAR_031209 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9HHP7 ((H+/oligopeptide symporter {ECO:0000313|EMBL:PIN17034.1}))
HSP 1 Score: 1033.48 bits (2671), Expect = 0.000e+0
Identity = 491/624 (78.69%), Postives = 554/624 (88.78%), Query Frame = 0
Match: A0A2G9HHP7 ((H+/oligopeptide symporter {ECO:0000313|EMBL:PIN17034.1}))
HSP 1 Score: 1033.48 bits (2671), Expect = 0.000e+0
Identity = 491/624 (78.69%), Postives = 554/624 (88.78%), Query Frame = 0
Query: 34 RKNLGLYFMESDEGRRTPFAGGYITGGGGGGGGTTPVDIQRKPISEQRLSKTGGWLAAFFIFGNEMTERMAYFGLSINMVAFMFYVMHRPFSSSANAVNNFLGISQASSVFGGFLADAYLGRYWTIAIFSTIYLAGLTGITLSATMNILVPKQDDCSQFALLLGNCESARPWQMFYLYTVLYITGFGAAGIRPCVSSFGADQFDERSQNYKSHLDRYFNLFYLCVTLGAIVAFTAIVYIQIKHGWGFAFGTLAIAMGISNMLFFLGTPLYRHRLPGGSPLTRVAQVLVAAFHKRNVSFDTTELIGLYELPGNRSAIKGSTKIPHSNDFRCLDKAALQLKDDGGDCQVPSPWKLCTVTQVEEVKILIKLLPIPACTIMLSLILTEFLTLSVQQAYTLNTYMGHLKLPVTCMPVFPGLSIFLLLSLYYTVFVPLSKRITGNPHGASQLQRVGIGLGLSILSVAWAAVFERFRRNYAIEHGFEASFLSPMPDLSAYWLLIQYCLIGLAEVFCIVGLLEFLYQEAPDAMRSIGSAYAALAGGLGCFAATALNSIINSATGDQEKRKISWLSQNINNGRFDYLYWLLTAMSLINFFIFLYCARRYQYRRKHTGA---AGGIEIATGEAV 654
RK LG+YF+ESD+ RRT GGYI+G TPV+I KPISE ++KTGGW+AAFFIFGNEM ERMAYFGLS+NMVAFMFYVMHRPF SSANAVNNFLGISQASSV GGFLADAYLGRYWTIAIF+TIYLAGLTGITL ATM++L+P QD C Q ALLLGNCE A+ WQM YLYTVLY+TGFGAAGIRPCVSSFGADQFDERS++YK HLDR+FN FYL VT+GAIVAFTA+VYIQ+KHGWG AFG+LAIAMG+SN++FFLGTPLYRHRLPGGSPLTRVAQVLVAAF KRNV F+++E++GLYELPG RSAIKGS+KIPH+ DFRCLDKAAL+LK+DG D PSPW+LCTVTQVEE+KIL+KLLPIPACTIML+LILTEFLTLSVQQAYTLNT++G LKLPVTCMPVFPGLSIFLLLSLYY+VFVPLS+RITG+PHGASQLQRVGIGL +SILSVAWA +FER+RR+YAIEH +EASFL+PMPDLSAYWLLIQYCLIG+AEV CIVGLLEFLY+EAPDAMRSIGSAYAA+AGGLGCFAAT LN+I+ S TGD EKRK SWLSQN+N GRFD+ YWLLT MS++NF FLY A RYQYR K ++++T E +
Sbjct: 29 RKRLGIYFLESDD-RRTALGGGYISGA-------TPVNIHGKPISEYTMTKTGGWIAAFFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFESSANAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMSVLMPNQDKCDQIALLLGNCEPAKSWQMLYLYTVLYVTGFGAAGIRPCVSSFGADQFDERSRDYKEHLDRFFNFFYLSVTVGAIVAFTAVVYIQMKHGWGSAFGSLAIAMGMSNLVFFLGTPLYRHRLPGGSPLTRVAQVLVAAFRKRNVPFESSEIVGLYELPGKRSAIKGSSKIPHTEDFRCLDKAALKLKEDGID---PSPWRLCTVTQVEEIKILLKLLPIPACTIMLNLILTEFLTLSVQQAYTLNTHIGRLKLPVTCMPVFPGLSIFLLLSLYYSVFVPLSRRITGHPHGASQLQRVGIGLAVSILSVAWAGIFERYRRHYAIEHAYEASFLTPMPDLSAYWLLIQYCLIGIAEVLCIVGLLEFLYEEAPDAMRSIGSAYAAVAGGLGCFAATILNNIVKSVTGDVEKRKPSWLSQNVNTGRFDHFYWLLTVMSVLNFCAFLYAAHRYQYRAKQVTEIRDQASVQLSTKEHI 641
BLAST of DCAR_031209 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A022QKN1 ((Uncharacterized protein {ECO:0000313|EMBL:EYU28486.1}))
HSP 1 Score: 1026.93 bits (2654), Expect = 0.000e+0
Identity = 495/639 (77.46%), Postives = 552/639 (86.38%), Query Frame = 0
Match: A0A022QKN1 ((Uncharacterized protein {ECO:0000313|EMBL:EYU28486.1}))
HSP 1 Score: 1026.93 bits (2654), Expect = 0.000e+0
Identity = 495/639 (77.46%), Postives = 552/639 (86.38%), Query Frame = 0
Query: 1 MDSTQVESDHGITSRSGSTSMEVASSSSVYKSSRKNLGLYFMESDEGRRTPFAGGYITGGGGGGGGTTPVDIQRKPISEQRLSKTGGWLAAFFIFGNEMTERMAYFGLSINMVAFMFYVMHRPFSSSANAVNNFLGISQASSVFGGFLADAYLGRYWTIAIFSTIYLAGLTGITLSATMNILVPKQDDCSQFALLLGNCESARPWQMFYLYTVLYITGFGAAGIRPCVSSFGADQFDERSQNYKSHLDRYFNLFYLCVTLGAIVAFTAIVYIQIKHGWGFAFGTLAIAMGISNMLFFLGTPLYRHRLPGGSPLTRVAQVLVAAFHKRNVSFDTTELIGLYELPGNRSAIKGSTKIPHSNDFRCLDKAALQLKDDGGDCQVPSPWKLCTVTQVEEVKILIKLLPIPACTIMLSLILTEFLTLSVQQAYTLNTYMGHLKLPVTCMPVFPGLSIFLLLSLYYTVFVPLSKRITGNPHGASQLQRVGIGLGLSILSVAWAAVFERFRRNYAIEHGFEASFLSPMPDLSAYWLLIQYCLIGLAEVFCIVGLLEFLYQEAPDAMRSIGSAYAALAGGLGCFAATALNSIINSATGDQEKRKISWLSQNINNGRFDYLYWLLTAMSLINFFIFLYCARRYQYRRKH 639
MDS +++S + S + S RK LGLYF+ESD+ RRT GGY + G TPV+I KPIS+ +SKTGGW+AAFFIFGNEM ERMAYFGLS+NMVAFMFYVMHRPF SSANAVNNFLGISQASSV GGFLADAYLGRYWTIAIFSTIYL GLTGITL T+ IL+P QD C Q ALLLGNCE A+PWQM YLYTVLYITGFGAAGIRPCVSSFGADQFDERS++YK HLDR+FN FYL VT+GAIVAFTA+VYIQIKHGWG AFG+LAIAMG+SN +FFLGTPLYRHRLPGGSPLTRVAQVLVAAF KRN SF+++E++GLYEL G RSAI+GS KI H+ DFRCLDKAAL+LK+D D PSPW+LCTVTQVEE+KILIKLLPIPACTIML+LILTE+LTLSVQQAYTLNT+MGHLKLPVTCMPVFPGLSIFL LSLYY+VFVPLS++ITG+PHGASQLQRVGIGL +SI+SVAWA VFE +RR+YAI+HG+EASFL+PM DLSAYWLLIQYCLIG+AEVFCIVGLLEFLY+EAPDAMRSIGSAYAA+AGGLGCFAAT LN+I+ S TGD EKRK SWLSQNIN GRFDY YWLLT MS+INF +FLY A RYQYR+K
Sbjct: 1 MDSREIKSPEVLPDTPASVESNTSRSHR-----RKRLGLYFLESDD-RRTALGGGYTSCGA------TPVNIHGKPISDFTMSKTGGWIAAFFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFESSANAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFSTIYLVGLTGITLCGTLTILMPNQDKCDQIALLLGNCEPAKPWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKDHLDRFFNFFYLSVTVGAIVAFTAVVYIQIKHGWGSAFGSLAIAMGMSNFVFFLGTPLYRHRLPGGSPLTRVAQVLVAAFRKRNASFESSEIVGLYELQGKRSAIQGSAKISHTEDFRCLDKAALKLKEDSLD---PSPWRLCTVTQVEEIKILIKLLPIPACTIMLNLILTEYLTLSVQQAYTLNTHMGHLKLPVTCMPVFPGLSIFLFLSLYYSVFVPLSRKITGHPHGASQLQRVGIGLAVSIVSVAWAGVFEGYRRHYAIQHGYEASFLTPMEDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMRSIGSAYAAVAGGLGCFAATILNNIVKSLTGDLEKRKPSWLSQNINTGRFDYFYWLLTVMSVINFCVFLYAANRYQYRKKQ 624
BLAST of DCAR_031209 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4D9BQF0 ((Uncharacterized protein {ECO:0000313|EMBL:TEY87853.1}))
HSP 1 Score: 1025.77 bits (2651), Expect = 0.000e+0
Identity = 489/633 (77.25%), Postives = 550/633 (86.89%), Query Frame = 0
Match: A0A4D9BQF0 ((Uncharacterized protein {ECO:0000313|EMBL:TEY87853.1}))
HSP 1 Score: 1025.77 bits (2651), Expect = 0.000e+0
Identity = 489/633 (77.25%), Postives = 550/633 (86.89%), Query Frame = 0
Query: 10 HGITSRS--GSTSMEVASSSSVYKSSRKNLGLYFMESDEGRRTPFAGGYITGGGGGGGGTTPVDIQRKPISEQRLSKTGGWLAAFFIFGNEMTERMAYFGLSINMVAFMFYVMHRPFSSSANAVNNFLGISQASSVFGGFLADAYLGRYWTIAIFSTIYLAGLTGITLSATMNILVPKQDDCSQFALLLGNCESARPWQMFYLYTVLYITGFGAAGIRPCVSSFGADQFDERSQNYKSHLDRYFNLFYLCVTLGAIVAFTAIVYIQIKHGWGFAFGTLAIAMGISNMLFFLGTPLYRHRLPGGSPLTRVAQVLVAAFHKRNVSFDTTELIGLYELPGNRSAIKGSTKIPHSNDFRCLDKAALQLKDDGGDCQVPSPWKLCTVTQVEEVKILIKLLPIPACTIMLSLILTEFLTLSVQQAYTLNTYMGHLKLPVTCMPVFPGLSIFLLLSLYYTVFVPLSKRITGNPHGASQLQRVGIGLGLSILSVAWAAVFERFRRNYAIEHGFEASFLSPMPDLSAYWLLIQYCLIGLAEVFCIVGLLEFLYQEAPDAMRSIGSAYAALAGGLGCFAATALNSIINSATGDQEKRKISWLSQNINNGRFDYLYWLLTAMSLINFFIFLYCARRYQYRRKHT 640
HG+ SR + V S RK LGLYF+ESD+ RRT GGY GG TPV I+ KP+SE +SKTGGWLAAFFIFGNEM ERMAYFGLS+NMVAFMFYVMHRPF +SANAVNNFLGISQASSV GGFLADAYLGRYWTIAIF+TIYLAGLTGITL AT+ L+P QD C Q ALLLGNC+ A+PWQM YLY VLY+T FGAAGIRPCVSSFGADQFDERS++YK HLDR+FN FYL VT+GAIVAFT IVYIQIKHGWG AFG+LA+AM ISN++FF+GTPLYRHRLPGGSPLTRVAQVLVAAF KR SF ++E++GLYELPG RSAIKGS+KI H++DFRCLDKAAL+LK+DG D PSPW+LCTVTQVEE+KILIKL+PIPACTIML+L+LTEFLTLSVQQAYTLNT+MG LKLPVTCMPVFPGLSIFLLLSLYY+VFVPLS++ITG+PHGASQLQRVGIGL +SI+SVAWA +FER+RR+YAIEHG+E SFL+PMPDLSAYWLLIQYCLIG+AEVFCIVGLLEFLY+EAPDAMRSIGSAYAA+AGGLGCFAAT LN+I+ S TGD+EKR+ SWLSQNIN GRFD+ YWLLT MS+INF +FL+ A RYQYR K
Sbjct: 2 HGMASREIKSPEPLPVTPVSVEAPHRRKRLGLYFLESDD-RRTALGGGYT-------GGATPVSIRGKPLSELSVSKTGGWLAAFFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFEASANAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATITSLMPNQDKCDQIALLLGNCDPAKPWQMLYLYVVLYVTAFGAAGIRPCVSSFGADQFDERSRDYKKHLDRFFNFFYLSVTVGAIVAFTVIVYIQIKHGWGSAFGSLAVAMAISNLVFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRKASFQSSEIVGLYELPGKRSAIKGSSKIAHTDDFRCLDKAALKLKEDGID---PSPWRLCTVTQVEEIKILIKLVPIPACTIMLNLVLTEFLTLSVQQAYTLNTHMGRLKLPVTCMPVFPGLSIFLLLSLYYSVFVPLSRKITGHPHGASQLQRVGIGLAVSIVSVAWAGLFERYRRHYAIEHGYEVSFLTPMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMRSIGSAYAAVAGGLGCFAATILNNIVKSVTGDEEKRRPSWLSQNINTGRFDHFYWLLTVMSVINFGVFLFAAHRYQYRAKQV 623
BLAST of DCAR_031209 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6HJ75 ((Uncharacterized protein {ECO:0000313|EMBL:CCB52272.1}))
HSP 1 Score: 1021.92 bits (2641), Expect = 0.000e+0
Identity = 491/608 (80.76%), Postives = 546/608 (89.80%), Query Frame = 0
Match: F6HJ75 ((Uncharacterized protein {ECO:0000313|EMBL:CCB52272.1}))
HSP 1 Score: 1021.92 bits (2641), Expect = 0.000e+0
Identity = 491/608 (80.76%), Postives = 546/608 (89.80%), Query Frame = 0
Query: 34 RKNLGLYFMESDEGRRTPFAGGYITGGGGGGGGTTPVDIQRKPISEQRLSKTGGWLAAFFIFGNEMTERMAYFGLSINMVAFMFYVMHRPFSSSANAVNNFLGISQASSVFGGFLADAYLGRYWTIAIFSTIYLAGLTGITLSATMNILVPKQDDCSQFALLLGNCESARPWQMFYLYTVLYITGFGAAGIRPCVSSFGADQFDERSQNYKSHLDRYFNLFYLCVTLGAIVAFTAIVYIQIKHGWGFAFGTLAIAMGISNMLFFLGTPLYRHRLPGGSPLTRVAQVLVAAFHKRNVSFDTTELIGLYELPGNRSAIKGSTKIPHSNDFRCLDKAALQLKDDGGDCQVPSPWKLCTVTQVEEVKILIKLLPIPACTIMLSLILTEFLTLSVQQAYTLNTYMGHLKLPVTCMPVFPGLSIFLLLSLYYTVFVPLSKRITGNPHGASQLQRVGIGLGLSILSVAWAAVFERFRRNYAIEHGFEASFLSPMPDLSAYWLLIQYCLIGLAEVFCIVGLLEFLYQEAPDAMRSIGSAYAALAGGLGCFAATALNSIINSATGDQEKRKISWLSQNINNGRFDYLYWLLTAMSLINFFIFLYCARRYQYRRKHTG 641
RK LG+YF+ESD+ RRT F GGY+ GGTTPV+I KPI + LSKTGGW+AAFFIFGNEM ERMAYFGLS+NMVAFMFYVMHRPFSSSANAVNNFLGISQASSV GGFLADAYLGRYWTIAIF+TIYLAGLTGITL ATMNI VP QD C QF+LLLG+CE A+PWQMFYLYTVLY+TGFGAAGIRPCVSSFGADQFDERS++YK+HLDR+FN FYL VT+GAIVAFTA+VYIQIK GWG AFG+LAIAMGISN++FF+GTPLYRHRLPGGSPLTRVAQVLVAAF KRNVSF + E +GLYELPG +SAIKGS KI H++DFRCLDKAALQLK+DG PSPW+LCTVTQVEEVKIL+KLLPIPACTI+LSLILTEFLTLSVQQAYTLNT++G LKLPVTCMPVFPGLSIFL+LSLYY++FVP+S+RITG+PHGASQLQRVGIGL +SILSVAWA VFER+RRNYAI+ G+E +FL+PMP LSAYWLLIQYCLIG+AEVFCIVGLLEFLY+EAPDAMRSIGSAYAA+AGGLGCF AT LNSII S TGD+++ SWLSQNIN GRFDYLYWLLT S+INF IFLY A+RY+YR G
Sbjct: 28 RKKLGIYFLESDD-RRTAFGGGYV-------GGTTPVNIHGKPIPD--LSKTGGWVAAFFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFSSSANAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMNIFVPNQDQCDQFSLLLGSCEPAKPWQMFYLYTVLYVTGFGAAGIRPCVSSFGADQFDERSRDYKTHLDRFFNFFYLSVTIGAIVAFTAVVYIQIKRGWGSAFGSLAIAMGISNLVFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRNVSFSSGEYVGLYELPGKQSAIKGSRKIVHTDDFRCLDKAALQLKEDGA---APSPWRLCTVTQVEEVKILVKLLPIPACTIILSLILTEFLTLSVQQAYTLNTHIGRLKLPVTCMPVFPGLSIFLILSLYYSIFVPISRRITGHPHGASQLQRVGIGLAVSILSVAWAGVFERYRRNYAIKQGYEFTFLTPMPHLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMRSIGSAYAAVAGGLGCFGATILNSIIKSITGDRQQMHPSWLSQNINTGRFDYLYWLLTVFSVINFCIFLYSAQRYKYRVAQEG 622
BLAST of DCAR_031209 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438H0P3 ((Protein NRT1/ PTR family 6.1 {ECO:0000313|EMBL:RVW78038.1}))
HSP 1 Score: 1021.92 bits (2641), Expect = 0.000e+0
Identity = 491/608 (80.76%), Postives = 546/608 (89.80%), Query Frame = 0
Match: A0A438H0P3 ((Protein NRT1/ PTR family 6.1 {ECO:0000313|EMBL:RVW78038.1}))
HSP 1 Score: 1021.92 bits (2641), Expect = 0.000e+0
Identity = 491/608 (80.76%), Postives = 546/608 (89.80%), Query Frame = 0
Query: 34 RKNLGLYFMESDEGRRTPFAGGYITGGGGGGGGTTPVDIQRKPISEQRLSKTGGWLAAFFIFGNEMTERMAYFGLSINMVAFMFYVMHRPFSSSANAVNNFLGISQASSVFGGFLADAYLGRYWTIAIFSTIYLAGLTGITLSATMNILVPKQDDCSQFALLLGNCESARPWQMFYLYTVLYITGFGAAGIRPCVSSFGADQFDERSQNYKSHLDRYFNLFYLCVTLGAIVAFTAIVYIQIKHGWGFAFGTLAIAMGISNMLFFLGTPLYRHRLPGGSPLTRVAQVLVAAFHKRNVSFDTTELIGLYELPGNRSAIKGSTKIPHSNDFRCLDKAALQLKDDGGDCQVPSPWKLCTVTQVEEVKILIKLLPIPACTIMLSLILTEFLTLSVQQAYTLNTYMGHLKLPVTCMPVFPGLSIFLLLSLYYTVFVPLSKRITGNPHGASQLQRVGIGLGLSILSVAWAAVFERFRRNYAIEHGFEASFLSPMPDLSAYWLLIQYCLIGLAEVFCIVGLLEFLYQEAPDAMRSIGSAYAALAGGLGCFAATALNSIINSATGDQEKRKISWLSQNINNGRFDYLYWLLTAMSLINFFIFLYCARRYQYRRKHTG 641
RK LG+YF+ESD+ RRT F GGY+ GGTTPV+I KPI + LSKTGGW+AAFFIFGNEM ERMAYFGLS+NMVAFMFYVMHRPFSSSANAVNNFLGISQASSV GGFLADAYLGRYWTIAIF+TIYLAGLTGITL ATMNI VP QD C QF+LLLG+CE A+PWQMFYLYTVLY+TGFGAAGIRPCVSSFGADQFDERS++YK+HLDR+FN FYL VT+GAIVAFTA+VYIQIK GWG AFG+LAIAMGISN++FF+GTPLYRHRLPGGSPLTRVAQVLVAAF KRNVSF + E +GLYELPG +SAIKGS KI H++DFRCLDKAALQLK+DG PSPW+LCTVTQVEEVKIL+KLLPIPACTI+LSLILTEFLTLSVQQAYTLNT++G LKLPVTCMPVFPGLSIFL+LSLYY++FVP+S+RITG+PHGASQLQRVGIGL +SILSVAWA VFER+RRNYAI+ G+E +FL+PMP LSAYWLLIQYCLIG+AEVFCIVGLLEFLY+EAPDAMRSIGSAYAA+AGGLGCF AT LNSII S TGD+++ SWLSQNIN GRFDYLYWLLT S+INF IFLY A+RY+YR G
Sbjct: 28 RKKLGIYFLESDD-RRTAFGGGYV-------GGTTPVNIHGKPIPD--LSKTGGWVAAFFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFSSSANAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMNIFVPNQDQCDQFSLLLGSCEPAKPWQMFYLYTVLYVTGFGAAGIRPCVSSFGADQFDERSRDYKTHLDRFFNFFYLSVTIGAIVAFTAVVYIQIKRGWGSAFGSLAIAMGISNLVFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRNVSFSSGEYVGLYELPGKQSAIKGSRKIVHTDDFRCLDKAALQLKEDGA---APSPWRLCTVTQVEEVKILVKLLPIPACTIILSLILTEFLTLSVQQAYTLNTHIGRLKLPVTCMPVFPGLSIFLILSLYYSIFVPISRRITGHPHGASQLQRVGIGLAVSILSVAWAGVFERYRRNYAIKQGYEFTFLTPMPHLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMRSIGSAYAAVAGGLGCFGATILNSIIKSITGDRQQMHPSWLSQNINTGRFDYLYWLLTVFSVINFCIFLYSAQRYKYRVAQEG 622
BLAST of DCAR_031209 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7ZPB0 ((protein NRT1/ PTR FAMILY 6.1 {ECO:0000313|RefSeq:XP_010250500.1}))
HSP 1 Score: 1021.15 bits (2639), Expect = 0.000e+0
Identity = 491/611 (80.36%), Postives = 546/611 (89.36%), Query Frame = 0
Match: A0A1U7ZPB0 ((protein NRT1/ PTR FAMILY 6.1 {ECO:0000313|RefSeq:XP_010250500.1}))
HSP 1 Score: 1021.15 bits (2639), Expect = 0.000e+0
Identity = 491/611 (80.36%), Postives = 546/611 (89.36%), Query Frame = 0
Query: 34 RKNLGLYFMESDEGRRTPFAGGYITGGGGGGGGTTPVDIQRKPISEQRLSKTGGWLAAFFIFGNEMTERMAYFGLSINMVAFMFYVMHRPFSSSANAVNNFLGISQASSVFGGFLADAYLGRYWTIAIFSTIYLAGLTGITLSATMNILVPKQDDCSQFALLLGNCESARPWQMFYLYTVLYITGFGAAGIRPCVSSFGADQFDERSQNYKSHLDRYFNLFYLCVTLGAIVAFTAIVYIQIKHGWGFAFGTLAIAMGISNMLFFLGTPLYRHRLPGGSPLTRVAQVLVAAFHKRNVSFDTTELIGLYELPGNRSAIKGSTKIPHSNDFRCLDKAALQLKDDGGDCQVPSPWKLCTVTQVEEVKILIKLLPIPACTIMLSLILTEFLTLSVQQAYTLNTYMGHLKLPVTCMPVFPGLSIFLLLSLYYTVFVPLSKRITGNPHGASQLQRVGIGLGLSILSVAWAAVFERFRRNYAIEHGFEASFLSPMPDLSAYWLLIQYCLIGLAEVFCIVGLLEFLYQEAPDAMRSIGSAYAALAGGLGCFAATALNSIINSATGDQEKRKISWLSQNINNGRFDYLYWLLTAMSLINFFIFLYCARRYQYRRKHTGAAG 644
RK LG+YF+ESD+ RRT GGY+ GGTTPV+I+ KPI++ LSKTGGW+AAFFIFGNEM ERMAYFGLS+NMVAFMFYVMHRPFSSSANAVNNFLGISQASSV GGFLADAYLGRYWTIAIF+TIYLAGLTGITL ATM+ VP QD C Q +LLLGNCE A+PWQM YLY LY+TGFGAAGIRPCVSSFGADQFDERS++YKSHLDRYFNLFYL VT+GAIVAFT +VYIQ+KHGWG AFG+LAIAMGISNMLFF+GTPLYRHRLPGGSPLTRVAQVLVAAF KRN SF ++EL+GLYE+PG RS IKGS KI H++DFRCLDKAALQLK+DG D P+PW+LCTVTQVEEVKIL+KLLPIPACTIML++ILTEFLTLSVQQAYTLNT+MG LKLPVTCMPVFPGLSIFL+LSLYY++FVPLS+RITG+PHGASQLQRVGIGL +SILSVAWA VFER+RRNYAI+HG+EASFLSPMPDLSAYWLLIQYCLIG+AEVFCIVGLLEFLYQEAPDAMRSIGSAYAA+AGG GCFAA+ LNSII S TGD + + SWLSQNIN GRFDYLYWLLT +S+INF FLY A++Y+Y + G
Sbjct: 28 RKKLGMYFIESDD-RRTAMGGGYV-------GGTTPVNIRGKPITD--LSKTGGWIAAFFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFSSSANAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMSTFVPNQDQCGQLSLLLGNCEPAKPWQMMYLYGFLYLTGFGAAGIRPCVSSFGADQFDERSRDYKSHLDRYFNLFYLSVTIGAIVAFTMVVYIQMKHGWGSAFGSLAIAMGISNMLFFVGTPLYRHRLPGGSPLTRVAQVLVAAFRKRNASFSSSELVGLYEVPGKRSVIKGSGKIAHTDDFRCLDKAALQLKEDGAD---PNPWRLCTVTQVEEVKILLKLLPIPACTIMLNVILTEFLTLSVQQAYTLNTHMGRLKLPVTCMPVFPGLSIFLILSLYYSIFVPLSRRITGHPHGASQLQRVGIGLAVSILSVAWAGVFERYRRNYAIKHGYEASFLSPMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYQEAPDAMRSIGSAYAAVAGGFGCFAASILNSIIKSVTGDTKAGRSSWLSQNINTGRFDYLYWLLTVLSVINFCAFLYSAQKYKYGEERDPENG 625
BLAST of DCAR_031209 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438D179 ((Protein NRT1/ PTR family 6.1 {ECO:0000313|EMBL:RVW29230.1}))
HSP 1 Score: 1020.76 bits (2638), Expect = 0.000e+0
Identity = 490/608 (80.59%), Postives = 546/608 (89.80%), Query Frame = 0
Match: A0A438D179 ((Protein NRT1/ PTR family 6.1 {ECO:0000313|EMBL:RVW29230.1}))
HSP 1 Score: 1020.76 bits (2638), Expect = 0.000e+0
Identity = 490/608 (80.59%), Postives = 546/608 (89.80%), Query Frame = 0
Query: 34 RKNLGLYFMESDEGRRTPFAGGYITGGGGGGGGTTPVDIQRKPISEQRLSKTGGWLAAFFIFGNEMTERMAYFGLSINMVAFMFYVMHRPFSSSANAVNNFLGISQASSVFGGFLADAYLGRYWTIAIFSTIYLAGLTGITLSATMNILVPKQDDCSQFALLLGNCESARPWQMFYLYTVLYITGFGAAGIRPCVSSFGADQFDERSQNYKSHLDRYFNLFYLCVTLGAIVAFTAIVYIQIKHGWGFAFGTLAIAMGISNMLFFLGTPLYRHRLPGGSPLTRVAQVLVAAFHKRNVSFDTTELIGLYELPGNRSAIKGSTKIPHSNDFRCLDKAALQLKDDGGDCQVPSPWKLCTVTQVEEVKILIKLLPIPACTIMLSLILTEFLTLSVQQAYTLNTYMGHLKLPVTCMPVFPGLSIFLLLSLYYTVFVPLSKRITGNPHGASQLQRVGIGLGLSILSVAWAAVFERFRRNYAIEHGFEASFLSPMPDLSAYWLLIQYCLIGLAEVFCIVGLLEFLYQEAPDAMRSIGSAYAALAGGLGCFAATALNSIINSATGDQEKRKISWLSQNINNGRFDYLYWLLTAMSLINFFIFLYCARRYQYRRKHTG 641
RK LG+YF+ESD+ RRT F GGY+ GGTTPV+I KPI + LSKTGGW+AAFFIFGNEM ERMAYFGLS+NMVAFMFYVMHRPFSSSANAVNNFLGISQASSV GGFLADAYLGRYWTIAIF+T+YLAGLTGITL ATMNI VP QD C QF+LLLG+CE A+PWQMFYLYTVLY+TGFGAAGIRPCVSSFGADQFDERS++YK+HLDR+FN FYL VT+GAIVAFTA+VYIQIK GWG AFG+LAIAMGISN++FF+GTPLYRHRLPGGSPLTRVAQVLVAAF KRNVSF + E +GLYELPG +SAIKGS KI H++DFRCLDKAALQLK+DG PSPW+LCTVTQVEEVKIL+KLLPIPACTI+LSLILTEFLTLSVQQAYTLNT++G LKLPVTCMPVFPGLSIFL+LSLYY++FVP+S+RITG+PHGASQLQRVGIGL +SILSVAWA VFER+RRNYAI+ G+E +FL+PMP LSAYWLLIQYCLIG+AEVFCIVGLLEFLY+EAPDAMRSIGSAYAA+AGGLGCF AT LNSII S TGD+++ SWLSQNIN GRFDYLYWLLT S+INF IFLY A+RY+YR G
Sbjct: 28 RKKLGIYFLESDD-RRTAFGGGYV-------GGTTPVNIHGKPIPD--LSKTGGWVAAFFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFSSSANAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTLYLAGLTGITLCATMNIFVPNQDQCDQFSLLLGSCEPAKPWQMFYLYTVLYVTGFGAAGIRPCVSSFGADQFDERSRDYKTHLDRFFNFFYLSVTIGAIVAFTAVVYIQIKRGWGSAFGSLAIAMGISNLVFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRNVSFSSGEYVGLYELPGKQSAIKGSRKIVHTDDFRCLDKAALQLKEDGA---APSPWRLCTVTQVEEVKILVKLLPIPACTIILSLILTEFLTLSVQQAYTLNTHIGRLKLPVTCMPVFPGLSIFLILSLYYSIFVPISRRITGHPHGASQLQRVGIGLAVSILSVAWAGVFERYRRNYAIKQGYEFTFLTPMPHLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMRSIGSAYAAVAGGLGCFGATILNSIIKSITGDRQQMHPSWLSQNINTGRFDYLYWLLTVFSVINFCIFLYSAQRYKYRVAQEG 622
BLAST of DCAR_031209 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438D185 ((Protein NRT1/ PTR family 6.1 {ECO:0000313|EMBL:RVW29228.1}))
HSP 1 Score: 1019.99 bits (2636), Expect = 0.000e+0
Identity = 490/608 (80.59%), Postives = 545/608 (89.64%), Query Frame = 0
Match: A0A438D185 ((Protein NRT1/ PTR family 6.1 {ECO:0000313|EMBL:RVW29228.1}))
HSP 1 Score: 1019.99 bits (2636), Expect = 0.000e+0
Identity = 490/608 (80.59%), Postives = 545/608 (89.64%), Query Frame = 0
Query: 34 RKNLGLYFMESDEGRRTPFAGGYITGGGGGGGGTTPVDIQRKPISEQRLSKTGGWLAAFFIFGNEMTERMAYFGLSINMVAFMFYVMHRPFSSSANAVNNFLGISQASSVFGGFLADAYLGRYWTIAIFSTIYLAGLTGITLSATMNILVPKQDDCSQFALLLGNCESARPWQMFYLYTVLYITGFGAAGIRPCVSSFGADQFDERSQNYKSHLDRYFNLFYLCVTLGAIVAFTAIVYIQIKHGWGFAFGTLAIAMGISNMLFFLGTPLYRHRLPGGSPLTRVAQVLVAAFHKRNVSFDTTELIGLYELPGNRSAIKGSTKIPHSNDFRCLDKAALQLKDDGGDCQVPSPWKLCTVTQVEEVKILIKLLPIPACTIMLSLILTEFLTLSVQQAYTLNTYMGHLKLPVTCMPVFPGLSIFLLLSLYYTVFVPLSKRITGNPHGASQLQRVGIGLGLSILSVAWAAVFERFRRNYAIEHGFEASFLSPMPDLSAYWLLIQYCLIGLAEVFCIVGLLEFLYQEAPDAMRSIGSAYAALAGGLGCFAATALNSIINSATGDQEKRKISWLSQNINNGRFDYLYWLLTAMSLINFFIFLYCARRYQYRRKHTG 641
RK LG+YF+ESD+ RRT F GGY+ GGTTPV+I KPI + LSKTGGW+AAFFIFGNEM ERMAYFGLS+NMVAFMFYVMHRPFSSSANAVNNFLGISQASSV GGFLADAYLGRYWTIAIF+TIYLAGLTGITL ATMNI VP QD C QF+LLLG+CE A+PWQM YLYTVLY+TGFGAAGIRPCVSSFGADQFDERS++YK+HLDR+FN FYL VT+GAIVAFTA+VYIQIK GWG AFG+LAIAMGISN++FF+GTPLYRHRLPGGSPLTRVAQVLVAAF KRNVSF + E +GLYELPG +SAIKGS KI H++DFRCLDKAALQLK+DG PSPW+LCTVTQVEEVKIL+KLLPIPACTI+LSLILTEFLTLSVQQAYTLNT++G LKLPVTCMPVFPGLSIFL+LSLYY++FVP+S+RITG+PHGASQLQRVGIGL +SILSVAWA VFER+RRNYAI+ G+E +FL+PMP LSAYWLLIQYCLIG+AEVFCIVGLLEFLY+EAPDAMRSIGSAYAA+AGGLGCF AT LNSII S TGD+++ SWLSQNIN GRFDYLYWLLT S+INF IFLY A+RY+YR G
Sbjct: 90 RKKLGIYFLESDD-RRTAFGGGYV-------GGTTPVNIHGKPIPD--LSKTGGWVAAFFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFSSSANAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMNIFVPNQDQCDQFSLLLGSCEPAKPWQMLYLYTVLYVTGFGAAGIRPCVSSFGADQFDERSRDYKTHLDRFFNFFYLSVTIGAIVAFTAVVYIQIKRGWGSAFGSLAIAMGISNLVFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRNVSFSSGEYVGLYELPGKQSAIKGSRKIVHTDDFRCLDKAALQLKEDGA---APSPWRLCTVTQVEEVKILVKLLPIPACTIILSLILTEFLTLSVQQAYTLNTHIGRLKLPVTCMPVFPGLSIFLILSLYYSIFVPISRRITGHPHGASQLQRVGIGLAVSILSVAWAGVFERYRRNYAIKQGYEFTFLTPMPHLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMRSIGSAYAAVAGGLGCFGATILNSIIKSITGDRQQMYPSWLSQNINTGRFDYLYWLLTVSSVINFCIFLYSAQRYKYRVAQEG 684
| Match Name | Stats | Description |
|---|---|---|
| A0A830BGP4 | E-Value: 0.000e+0, PID: 77.31 | (Protein nrt1/ ptr family 6.1 {ECO:0000313|EMBL:GF... [more] |
| A0A6I9TQI0 | E-Value: 0.000e+0, PID: 77.66 | (protein NRT1/ PTR FAMILY 6.1 {ECO:0000313|RefSeq:... [more] |
| A0A2G9HHP7 | E-Value: 0.000e+0, PID: 78.69 | (H+/oligopeptide symporter {ECO:0000313|EMBL:PIN17... [more] |
| A0A022QKN1 | E-Value: 0.000e+0, PID: 77.46 | (Uncharacterized protein {ECO:0000313|EMBL:EYU2848... [more] |
| A0A4D9BQF0 | E-Value: 0.000e+0, PID: 77.25 | (Uncharacterized protein {ECO:0000313|EMBL:TEY8785... [more] |
| F6HJ75 | E-Value: 0.000e+0, PID: 80.76 | (Uncharacterized protein {ECO:0000313|EMBL:CCB5227... [more] |
| A0A438H0P3 | E-Value: 0.000e+0, PID: 80.76 | (Protein NRT1/ PTR family 6.1 {ECO:0000313|EMBL:RV... [more] |
| A0A1U7ZPB0 | E-Value: 0.000e+0, PID: 80.36 | (protein NRT1/ PTR FAMILY 6.1 {ECO:0000313|RefSeq:... [more] |
| A0A438D179 | E-Value: 0.000e+0, PID: 80.59 | (Protein NRT1/ PTR family 6.1 {ECO:0000313|EMBL:RV... [more] |
| A0A438D185 | E-Value: 0.000e+0, PID: 80.59 | (Protein NRT1/ PTR family 6.1 {ECO:0000313|EMBL:RV... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |