Resource Type:
Polypeptide
Name:
DCAR_030488
Identifier:
DCAR_030488.mRNA-protein
Sequence:
MALFTFFIITIALLLPISAPQPTVAPPPSSATCNEIFISYTVTSVKKIPP
TQKRNQPYRFESSLFVVNNGLDELKSWRVFVGFRNEEVLVSASNAVLSDG
TSLPGKVGNGSVFVGYPNADLKTGVETAGDLSQMSVKVDLVGTEFGVGAG
SFPLPSNVSLVNDGFLCPKPTLQGKNQMELCCTKDPKFKSNVTEDEEFLR
RQDGDLTIMYDVTKTYESYYWADVTISNHNPLGRLDNWKLNWDWMRDEFI
YTMKGAYPSVLDSSNCIYGRQGEFYKTMDFSTVMNCQRRPTIVDLPLTKT
NDTALGLVPFCCRNGTILPPTMDPSKSISAFQMQVYKMPPDLNRSQLSPP
QNWKISGRLNPDYVCGPPVRVSPSRFSDPSGLSDSTAVASWQVVCNITQA
KGSSPRCCVSFSAYYNESIIPCKTCACGCPSNTARTCSTSASALLLPSQA
LLVPFENRTRMSLAWADIKHLPVSNPLPCGDNCGVSINWHLLTDYRGGWS
ARMTVFNWEDEAFVDWFAAVELDKAALGFKEVYSFNGSALNGVNNTIFME
GLPGLNYLVGETDAPRPDRDPRVPGKQQSVISFTKKKTPGINIPAGDGFP
TKVFFNGEECSLPRILPSGNSYRLHSSVSTSFVLALVILVLIQQ*
Sequence Length:
645
Sequence Checksum:
e39d588c6ea44052a905801458462903
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_030488, derives from mRNA, DCAR_030488. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_030488 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_030488 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BAD9 ((Putative COBRA-like protein 7 {ECO:0000313|EMBL:MPA65879.1}) (Fragment))
HSP 1 Score: 1002.66 bits (2591), Expect = 0.000e+0
Identity = 457/648 (70.52%), Postives = 556/648 (85.80%), Query Frame = 0
Match: A0A5B7BAD9 ((Putative COBRA-like protein 7 {ECO:0000313|EMBL:MPA65879.1}) (Fragment))
HSP 1 Score: 1002.66 bits (2591), Expect = 0.000e+0
Identity = 457/648 (70.52%), Postives = 556/648 (85.80%), Query Frame = 0
Query: 1 MALFTFFIITIALLLPISAPQPTVAPPPSSATCNEIFISYTVTSVKKIPPTQKRN---QPYRFESSLFVVNNGLDELKSWRVFVGFRNEEVLVSASNAVLSDGTSLPGKVGNGSVFVGYPNADLKTGVETAGDLSQMSVKVDLVGTEFGVGAGSFPLPSNVSLVNDGFLCPKPTLQGKNQMELCCTKDPKFKSNVTEDEEFLRRQDGDLTIMYDVTKTYESYYWADVTISNHNPLGRLDNWKLNWDWMRDEFIYTMKGAYPSVLDSSNCIYGRQGEFYKTMDFSTVMNCQRRPTIVDLPLTKTNDTALGLVPFCCRNGTILPPTMDPSKSISAFQMQVYKMPPDLNRSQLSPPQNWKISGRLNPDYVCGPPVRVSPSRFSDPSGL-SDSTAVASWQVVCNITQAKGSSPRCCVSFSAYYNESIIPCKTCACGCPSNTARTCSTSASALLLPSQALLVPFENRTRMSLAWADIKHLPVSNPLPCGDNCGVSINWHLLTDYRGGWSARMTVFNWEDEAFVDWFAAVELDKAALGFKEVYSFNGSALNGVNNTIFMEGLPGLNYLVGETDAPRPDRDPRVPGKQQSVISFTKKKTPGINIPAGDGFPTKVFFNGEECSLPRILPSGNSYRLHSSVSTSFVLALVILVLIQQ 644
+ +F I T++ +P + Q T AP P++ CN I++SY TS ++PP+ K + QPYRFES+L ++NNGL+ELKSW+VFVGF+++E LVSASNAVL+DGTSLP VGNG+ F GYP+ DLKT +ETAGD +QMSV+++LVGT+FGVG+ + P+P+N+SL NDGF+CP PT+QGK++M++CCTKD FKSN+T DEEFL RQ+GDLTIMYDV +TY+S YWA VTISNHNPLGRLDNW+L+WDWMRDEFI+ MKGAYP +DSS+CI+G+QG++YK MDFS V+NC+RRPTI+DLPLTK NDT+LG++PFCCRNGTILPP+MDPSKS S FQ+ V+KMPPDLNRSQLSPPQNWKI+G LNPDY+CGPPVRVSPS+F DPSGL SDSTAVASWQVVCNITQ KG+SPRCCVSFSAYYNES++PCKTCACGCPSNT+RTCST+A ALLLPSQALLVPFENRT M+LAWAD+KH NPLPCGDNCGVSINWHL TDY GW+AR+T+FNW+ F DWFAAVELD+AA GF++ YSFNGSALNGVNNTIFM+G+ GLNYLVGETDA P +DPRVPGKQQSVISFTKK P I++ GDGFPTK++FNGEECSLP +LP+ N++R S+++ S +L ++ +L QQ
Sbjct: 20 LFIFNLIIATLSATIPAAVSQ-TQAPSPAADACNGIYLSYAYTSGSQLPPSLKSDPTHQPYRFESTLTILNNGLEELKSWKVFVGFQHDEYLVSASNAVLADGTSLPASVGNGTFFAGYPSTDLKTAIETAGDTTQMSVQINLVGTQFGVGSPNVPMPTNISLANDGFVCPTPTMQGKSEMQVCCTKDSNFKSNITLDEEFLPRQNGDLTIMYDVIRTYDSNYWAQVTISNHNPLGRLDNWRLSWDWMRDEFIFAMKGAYPDAVDSSDCIFGQQGQYYKDMDFSNVLNCERRPTIIDLPLTKANDTSLGMIPFCCRNGTILPPSMDPSKSTSVFQINVFKMPPDLNRSQLSPPQNWKINGTLNPDYLCGPPVRVSPSQFPDPSGLPSDSTAVASWQVVCNITQPKGASPRCCVSFSAYYNESVVPCKTCACGCPSNTSRTCSTTAPALLLPSQALLVPFENRTNMALAWADLKHFTTPNPLPCGDNCGVSINWHLYTDYSNGWTARVTIFNWDVNVFADWFAAVELDRAAPGFEKAYSFNGSALNGVNNTIFMQGVEGLNYLVGETDADDPQKDPRVPGKQQSVISFTKKNIPAIDVAGGDGFPTKLYFNGEECSLPTVLPTSNAFRTGSTITISLLLVVLAFMLNQQ 666
BLAST of DCAR_030488 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7YQR5 ((COBRA-like protein 7 {ECO:0000313|RefSeq:XP_009801564.1}))
HSP 1 Score: 987.638 bits (2552), Expect = 0.000e+0
Identity = 459/644 (71.27%), Postives = 549/644 (85.25%), Query Frame = 0
Match: A0A1U7YQR5 ((COBRA-like protein 7 {ECO:0000313|RefSeq:XP_009801564.1}))
HSP 1 Score: 987.638 bits (2552), Expect = 0.000e+0
Identity = 459/644 (71.27%), Postives = 549/644 (85.25%), Query Frame = 0
Query: 3 LFTFFIITIALLLPISAPQPTVAPPPSSATCNEIFISYTVTSVKKIPPTQKRNQPYRFESSLFVVNNGLDELKSWRVFVGFRNEEVLVSASNAVLSDGTSLPGKVGNGSVFVGYPNADLKTGVETAGDLSQMSVKVDLVGTEFGVGAGSFPLPSNVSLVNDGFLCPKPTLQGKNQMELCCTKDPKFKSNVTEDEEFLRRQDGDLTIMYDVTKTYESYYWADVTISNHNPLGRLDNWKLNWDWMRDEFIYTMKGAYPSVLDSSNCIYGRQGEFYKTMDFSTVMNCQRRPTIVDLPLTKTNDTALGLVPFCCRNGTILPPTMDPSKSISAFQMQVYKMPPDLNRSQLSPPQNWKISGRLNPDYVCGPPVRVSPSRFSDPSG-LSDSTAVASWQVVCNITQAKGSSPRCCVSFSAYYNESIIPCKTCACGCPSNTARTCSTSASALLLPSQALLVPFENRTRMSLAWADIKHLPVSNPLPCGDNCGVSINWHLLTDYRGGWSARMTVFNWEDEAFVDWFAAVELDKAALGFKEVYSFNGSALNGVNNTIFMEGLPGLNYLVGETDAPRPDRDPRVPGKQQSVISFTKKKTPGINIPAGDGFPTKVFFNGEECSLPRILPSGNSYRLHSSVS-TSFVLALVILVLIQQ 644
L F +I++A+ + AP P+S CN IF+ Y TS KI P+ +NQPY+F+S L + NNGLDELK WRVFVGF+++E+LVSASN VL+DG+SLP KVGNG+VF G+PNADLKT +ETAGD +Q SV+V + GT+FGVG+ + P+PSN+SLVNDGF+CPKP++QGK+ M++CC KDPKFK+N+T DEEF RQDGDLTIMYD+ +TY+S YWA V I+NHNPLGRLDNW+L+WDWM+DEFI+ MKGAYPSV+D+S+C++G QG+FY+++DFS +NC+RRPTI+DLPL KTNDT LG++PFCCRNGTILPP MDPSKS SAFQ+ V+KMPPDLNRS +PPQNWKI GRLNPDY CGPPVRVSPS+F DPSG L D+ A ASWQVVCNITQ KG+SPRCCVSFSA+YNESIIPC TC+CGCPSNTARTCS A ALLLPSQALLVPFENRT+MSLAWADI HLPVSNPLPCGDNCGVSINWHL TDYRGGWSAR+T+FNW+D +F DWF AV+LDKAALGF VYSFNG+ L+GVNNT+FM+GL GLNYLV ETD P++DPRVPGKQQSVISFTKK PGINIP GDGFPTKV+FNGEECSLP+ILP+ +S R SS + T+ +LALV+ +L++Q
Sbjct: 18 LSLFLLISVAVQVAGQTSPVAEAPAPASDDCNGIFLQYVFTSGSKIKPSDPKNQPYKFQSILSITNNGLDELKLWRVFVGFQHDELLVSASNVVLADGSSLPAKVGNGTVFAGFPNADLKTAIETAGDATQTSVQVQITGTQFGVGSPNVPMPSNISLVNDGFICPKPSIQGKSVMQVCCAKDPKFKTNLTLDEEFSPRQDGDLTIMYDILRTYDSNYWAQVKIANHNPLGRLDNWRLSWDWMKDEFIWEMKGAYPSVVDTSDCVFGPQGKFYQSLDFSNGLNCERRPTIIDLPLEKTNDTKLGMIPFCCRNGTILPPAMDPSKSASAFQINVFKMPPDLNRSSFTPPQNWKIEGRLNPDYKCGPPVRVSPSQFPDPSGLLPDTAAFASWQVVCNITQPKGASPRCCVSFSAFYNESIIPCPTCSCGCPSNTARTCSAKAPALLLPSQALLVPFENRTKMSLAWADINHLPVSNPLPCGDNCGVSINWHLFTDYRGGWSARITLFNWDDTSFADWFTAVQLDKAALGFDAVYSFNGTILDGVNNTLFMQGLEGLNYLVAETDGANPEKDPRVPGKQQSVISFTKKNIPGINIPGGDGFPTKVYFNGEECSLPKILPTSSSSRRISSFTVTTSILALVVFMLMRQ 661
BLAST of DCAR_030488 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6II23 ((Cobra-like protein 7 {ECO:0000313|EMBL:OIS98554.1}))
HSP 1 Score: 982.63 bits (2539), Expect = 0.000e+0
Identity = 458/645 (71.01%), Postives = 549/645 (85.12%), Query Frame = 0
Match: A0A1J6II23 ((Cobra-like protein 7 {ECO:0000313|EMBL:OIS98554.1}))
HSP 1 Score: 982.63 bits (2539), Expect = 0.000e+0
Identity = 458/645 (71.01%), Postives = 549/645 (85.12%), Query Frame = 0
Query: 3 LFTFFIITIALLLPISAPQPTVAPPPSSATCNEIFISYTVTSVKKIPPTQKRNQPYRFESSLFVVNNGLDELKSWRVFVGFRNEEVLVSASNAVLSDGTSLPGKVGNGSVFVGYPNADLKTGVETAGDLSQMSVKVDLVGTEFGVGAGSFPLPSNVSLVNDGFLCPKPTLQGKNQMELCCTKDPKFKSNVTEDEEFLRRQDGDLTIMYDVTKTYESYYWADVTISNHNPLGRLDNWKLNWDWMRDEFIYTMKGAYPSVLDSSNCIYGRQGEFYKTMDFSTVMNCQRRPTIVDLPLTKTNDTALGLVPFCCRNGTILPPTMDPSKSISAFQMQVYKMPPDLNRSQLSPPQNWKISGRLNPDYVCGPPVRVSPSRFSDPSG-LSDSTAVASWQVVCNITQAKGSSPRCCVSFSAYYNESIIPCKTCACGCPSNTARTCSTSASALLLPSQALLVPFENRTRMSLAWADIKHLPVSNPLPCGDNCGVSINWHLLTDYRGGWSARMTVFNWEDEAFVDWFAAVELDKAALGFKEVYSFNGSALNGVNNTIFMEGLPGLNYLVGETDAPRPDRDPRVPGKQQSVISFTKKKTPGINIPAGDGFPTKVFFNGEECSLPRILPSGNSYRLHS--SVSTSFVLALVILVLIQQ 644
L F +I++A+ + AP P+S CN IF+ Y TS KI P+ +NQPY+F+S L ++NNGLDELK WRVFVGF+++E+LVSASN VL+DG+SLP KVGNG+VF G+PNADLKT +ETAGD +Q SV+V + GT+FGVG+ + P+PSN+SLVNDGF+CPKP++QGK+ M++CCTKDP+FK+N+T DEEF RQDGDLTIMYD+ +TY+S YWA V I NHNPLGRLDNW+L+WDWM+DEFI+ MKGAYPSV+D+S+C++G Q +FY+++DFS +NC+RRPTI+DLPL KTNDT LG++PFCCRNGTILPP MDPSKS SAFQ+ V+KMPPDLNRS +PPQNWKI GRLNPDY CGPPVRVSPS+F DPSG L D+ A ASWQVVCNITQ KG+SPRCCVSFSA+YNESIIPC TC+CGCPSNTARTCS A ALLLPSQALLVPFENRT+MSLAWADI HLPVSNPLPCGDNCGVSINWHL TDYRGGWSAR+T+FNW+D +F DWF AV+LDKAALGF VYSFNG+ L+GVNNT+FM+GL GLNYLV ETD ++DPRVPGKQQSVISFTKK PGINIP GDGFPTKV+FNGEECSLP+ILP+ +S R S +V+TS +LALV+ +L++Q
Sbjct: 7 LSLFLLISVAVQVAGQTSTVAEAPAPASDDCNGIFLQYVFTSGSKIKPSDPKNQPYKFQSILSIINNGLDELKLWRVFVGFQHDELLVSASNVVLADGSSLPAKVGNGTVFAGFPNADLKTAIETAGDATQTSVQVQIKGTQFGVGSPNVPMPSNISLVNDGFICPKPSMQGKSVMQVCCTKDPEFKTNLTLDEEFSPRQDGDLTIMYDILRTYDSNYWAQVKIGNHNPLGRLDNWRLSWDWMKDEFIWEMKGAYPSVVDTSDCVFGPQAKFYQSLDFSNGLNCERRPTIIDLPLEKTNDTKLGMIPFCCRNGTILPPAMDPSKSASAFQINVFKMPPDLNRSSFTPPQNWKIEGRLNPDYKCGPPVRVSPSQFPDPSGLLPDTAAFASWQVVCNITQPKGASPRCCVSFSAFYNESIIPCPTCSCGCPSNTARTCSAKAPALLLPSQALLVPFENRTKMSLAWADINHLPVSNPLPCGDNCGVSINWHLFTDYRGGWSARITLFNWDDTSFADWFTAVQLDKAALGFDAVYSFNGTILDGVNNTLFMQGLEGLNYLVAETDGANSEKDPRVPGKQQSVISFTKKNIPGINIPGGDGFPTKVYFNGEECSLPKILPTSSSSRRISSFTVATS-ILALVVFMLMRQ 650
BLAST of DCAR_030488 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4A954 ((COBRA-like protein 7 {ECO:0000313|RefSeq:XP_016473177.1}))
HSP 1 Score: 978.008 bits (2527), Expect = 0.000e+0
Identity = 460/647 (71.10%), Postives = 546/647 (84.39%), Query Frame = 0
Match: A0A1S4A954 ((COBRA-like protein 7 {ECO:0000313|RefSeq:XP_016473177.1}))
HSP 1 Score: 978.008 bits (2527), Expect = 0.000e+0
Identity = 460/647 (71.10%), Postives = 546/647 (84.39%), Query Frame = 0
Query: 3 LFTFFIITIALLLPISAPQPTVAPPPSSATCNEIFISYTVTSVKKIPPTQK---RNQPYRFESSLFVVNNGLDELKSWRVFVGFRNEEVLVSASNAVLSDGTSLPGKVGNGSVFVGYPNADLKTGVETAGDLSQMSVKVDLVGTEFGVGAGSFPLPSNVSLVNDGFLCPKPTLQGKNQMELCCTKDPKFKSNVTEDEEFLRRQDGDLTIMYDVTKTYESYYWADVTISNHNPLGRLDNWKLNWDWMRDEFIYTMKGAYPSVLDSSNCIYGRQGEFYKTMDFSTVMNCQRRPTIVDLPLTKTNDTALGLVPFCCRNGTILPPTMDPSKSISAFQMQVYKMPPDLNRSQLSPPQNWKISGRLNPDYVCGPPVRVSPSRFSDPSG-LSDSTAVASWQVVCNITQAKGSSPRCCVSFSAYYNESIIPCKTCACGCPSNTARTCSTSASALLLPSQALLVPFENRTRMSLAWADIKHLPVSNPLPCGDNCGVSINWHLLTDYRGGWSARMTVFNWEDEAFVDWFAAVELDKAALGFKEVYSFNGSALNGVNNTIFMEGLPGLNYLVGETDAPRPDRDPRVPGKQQSVISFTKKKTPGINIPAGDGFPTKVFFNGEECSLPRILPSGNSYRLHSSVS-TSFVLALVILVLIQQ 644
L F +I++A+ + AP P+S CN I + Y TS KI PT K +NQPY+F+S L ++NNGLDELK WRVFVGF+ +E+LVSASN VL+DG+S P KVGNG+VF G+PNADLKT VETAGD +Q SV+V + GT+FGVG+ + P+PSN+SLVNDGF+C KP++QGK+ M++CC KDPKFK+N+T DEEF RQDGDLTIMYD+ +TY+S YWA V I+NHN LGRLDNWKL+WDWM+DEFI+ MKGAYPSV+D+S C++G QG+FY+++DFS +NC+RRPTI+DLPL KTNDT LG++PFCCRNGTILPP MDPSKS SAFQ+ V+KMPPDLNRS +PPQNWKI GRLNPDY CGPPVRVSPS+F DPSG L D+ A ASWQVVCNITQ KG+SPRCCVSFSA+YNESIIPC TC+CGCPSNTARTCST A ALLLPSQALLVPFENRT+MSLAWADI HLPVSNPLPCGDNCGVSINWHL TDYRGGWSAR+T+FNW+D +F DWF AV+LDKAALGF VYSFNG+ L+GVNNT+FM+GL GLNYLV ETD P++DPRVPGKQQSVISFTKK PGINIP GDGFPTK+FFNGEECSLP+ILP+ +S R SS + T+ +LALV+ +L++Q
Sbjct: 18 LSLFLLISVAVQVAGQTTPVAEAPAPASDDCNGILLQYVFTSGSKIKPTLKSNPKNQPYKFQSILSIINNGLDELKLWRVFVGFQYDELLVSASNVVLADGSSFPAKVGNGTVFAGFPNADLKTAVETAGDATQTSVQVQIKGTQFGVGSPNVPMPSNISLVNDGFICLKPSMQGKSVMQVCCNKDPKFKTNLTLDEEFSPRQDGDLTIMYDILRTYDSNYWAQVKIANHNTLGRLDNWKLSWDWMKDEFIWEMKGAYPSVVDTSECVFGPQGKFYQSLDFSNGLNCERRPTIIDLPLEKTNDTKLGMIPFCCRNGTILPPAMDPSKSASAFQINVFKMPPDLNRSSFTPPQNWKIEGRLNPDYKCGPPVRVSPSQFPDPSGLLPDTAAFASWQVVCNITQPKGASPRCCVSFSAFYNESIIPCPTCSCGCPSNTARTCSTKAPALLLPSQALLVPFENRTKMSLAWADINHLPVSNPLPCGDNCGVSINWHLFTDYRGGWSARITLFNWDDTSFADWFTAVQLDKAALGFDAVYSFNGTILDGVNNTLFMQGLEGLNYLVAETDGANPEKDPRVPGKQQSVISFTKKNIPGINIPGGDGFPTKIFFNGEECSLPKILPTSSSSRRISSFAVTTSILALVVFMLMRQ 664
BLAST of DCAR_030488 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068TTY2 ((Uncharacterized protein {ECO:0000313|EMBL:CDO98803.1}))
HSP 1 Score: 974.156 bits (2517), Expect = 0.000e+0
Identity = 451/625 (72.16%), Postives = 533/625 (85.28%), Query Frame = 0
Match: A0A068TTY2 ((Uncharacterized protein {ECO:0000313|EMBL:CDO98803.1}))
HSP 1 Score: 974.156 bits (2517), Expect = 0.000e+0
Identity = 451/625 (72.16%), Postives = 533/625 (85.28%), Query Frame = 0
Query: 21 QPTVAPPPSSATCNEIFISYTVTSVKKIPPTQKRNQPYRFESSLFVVNNGLDELKSWRVFVGFRNEEVLVSASNAVLSDGTSLPGKVGNGSVFVGYPNADLKTGVETAGDLSQMSVKVDLVGTEFGVGAGSFPLPSNVSLVNDGFLCPKPTLQGKNQMELCCTKDPKFKSNVTEDEEFLRRQDGDLTIMYDVTKTYESYYWADVTISNHNPLGRLDNWKLNWDWMRDEFIYTMKGAYPSVLDSSNCIYGRQGEFYKTMDFSTVMNCQRRPTIVDLPLTKTNDTALGLVPFCCRNGTILPPTMDPSKSISAFQMQVYKMPPDLNRSQLSPPQNWKISGRLNPDYVCGPPVRVSPSRFSDPSGL-SDSTAVASWQVVCNITQAKGSSPRCCVSFSAYYNESIIPCKTCACGCPSNTARTCSTSASALLLPSQALLVPFENRTRMSLAWADIKHLPVSNPLPCGDNCGVSINWHLLTDYRGGWSARMTVFNWEDEAFVDWFAAVELDKAALGFKEVYSFNGSALNGVNNTIFMEGLPGLNYLVGETDAPRPDRDPRVPGKQQSVISFTKKKTPGINIPAGDGFPTKVFFNGEECSLPRILPSGNSYRLHSSVSTSFVLALVILVLIQQ 644
QPT AP P++ CN +F+SYT TS +KIPP + QPYRF+S+L V+NNGL ELKSWRVFVGF+++E LVSASNAVL+DG+SLP VGNG+VF GYPN+DLKT +ETAGD +QM V+VDLVGT+FGVG+ P+P N+SLVNDG+LC KP+ QGKN M++CCT+D KFK+NVT EEFL RQ+GDLTIMYDV +TY S YWA VTISNHNPLGRLDNWKL+WDWMRDEFI+ MKGAYP+V+D+S CI+G+QG+FY+ +DFST +NC+RRPTIVDLPL KTNDT LG++PFCCRNGTILPP+MDPSKSIS+FQ+ V+KMPPD NRSQL+PPQNW I+G++NPDY CGPPVRVSPS F DPSGL S+S AVASWQVVCNITQ KG+SPRCCVSFSAYYNESIIPC+TCACGCPS + TCS A ALLLPSQALL+P ENRT+++ AWA + H PV NPLPC DNCGVSINWH+ TDYRGGWSAR+T+FNW+D +F DWFAAVELDK A GF++VYSFNGS L+GVNNTI M+G GLNYLV E+D P +D RVPGKQQSVISFTKK PG++I GDGFPTKV+FNGEECSLPRILP+ NSYR+ SS+ S + AL + +QQ
Sbjct: 23 QPT-APSPAADVCNGVFLSYTFTSSRKIPPALRSGQPYRFQSTLLVLNNGLQELKSWRVFVGFQHDEFLVSASNAVLADGSSLPVGVGNGTVFAGYPNSDLKTAIETAGDQTQMGVQVDLVGTQFGVGSPDVPMPQNISLVNDGWLCSKPSTQGKNVMQVCCTQDSKFKANVTT-EEFLPRQNGDLTIMYDVIRTYGSNYWAQVTISNHNPLGRLDNWKLSWDWMRDEFIFAMKGAYPAVVDTSECIFGKQGQFYQDLDFSTALNCERRPTIVDLPLAKTNDTNLGMIPFCCRNGTILPPSMDPSKSISSFQINVFKMPPDNNRSQLNPPQNWNITGKVNPDYQCGPPVRVSPSEFPDPSGLLSNSAAVASWQVVCNITQPKGASPRCCVSFSAYYNESIIPCQTCACGCPSTSTSTCSAKAPALLLPSQALLIPVENRTQLAKAWAGLHHFPVPNPLPCADNCGVSINWHVATDYRGGWSARITIFNWDDFSFPDWFAAVELDKTASGFEKVYSFNGSTLSGVNNTIVMQGKEGLNYLVAESDGADPQKDFRVPGKQQSVISFTKKNIPGVDIAGGDGFPTKVYFNGEECSLPRILPTNNSYRMGSSIIISLIFALAVFSFMQQ 645
BLAST of DCAR_030488 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6WKF4 ((COBRA-like protein 7 {ECO:0000313|RefSeq:XP_027115944.1}))
HSP 1 Score: 971.074 bits (2509), Expect = 0.000e+0
Identity = 449/625 (71.84%), Postives = 531/625 (84.96%), Query Frame = 0
Match: A0A6P6WKF4 ((COBRA-like protein 7 {ECO:0000313|RefSeq:XP_027115944.1}))
HSP 1 Score: 971.074 bits (2509), Expect = 0.000e+0
Identity = 449/625 (71.84%), Postives = 531/625 (84.96%), Query Frame = 0
Query: 21 QPTVAPPPSSATCNEIFISYTVTSVKKIPPTQKRNQPYRFESSLFVVNNGLDELKSWRVFVGFRNEEVLVSASNAVLSDGTSLPGKVGNGSVFVGYPNADLKTGVETAGDLSQMSVKVDLVGTEFGVGAGSFPLPSNVSLVNDGFLCPKPTLQGKNQMELCCTKDPKFKSNVTEDEEFLRRQDGDLTIMYDVTKTYESYYWADVTISNHNPLGRLDNWKLNWDWMRDEFIYTMKGAYPSVLDSSNCIYGRQGEFYKTMDFSTVMNCQRRPTIVDLPLTKTNDTALGLVPFCCRNGTILPPTMDPSKSISAFQMQVYKMPPDLNRSQLSPPQNWKISGRLNPDYVCGPPVRVSPSRFSDPSGL-SDSTAVASWQVVCNITQAKGSSPRCCVSFSAYYNESIIPCKTCACGCPSNTARTCSTSASALLLPSQALLVPFENRTRMSLAWADIKHLPVSNPLPCGDNCGVSINWHLLTDYRGGWSARMTVFNWEDEAFVDWFAAVELDKAALGFKEVYSFNGSALNGVNNTIFMEGLPGLNYLVGETDAPRPDRDPRVPGKQQSVISFTKKKTPGINIPAGDGFPTKVFFNGEECSLPRILPSGNSYRLHSSVSTSFVLALVILVLIQQ 644
QPT AP P++ CN +F+SYT TS +KIPP + QPYRF+S+L V+NNGL ELKSWRVFVGF+++E LVSASNAVL+DG+SLP VGNG+VF GYPN+DLKT +ETAGD +QM V+VDLVGT+FGVG+ P+P N+SLVNDG+LC KP+ QGKN M++CCT+D KFK+NVT EEFL Q+GDLTIMYDV +TY S YWA VTISNHNPLGRLDNWKL+WDWMRDEFI+ MKGAYP+V+D+S CI+G+QG+FY+ +DFST +NC+RRPTIVDLPL KTNDT LG++PFCCRNGTILPP+MDPSKSIS+FQ+ V+KMPPD NRSQL+PPQNW I+G +NPDY CGPPVRVSPS F DPSGL S++ AVASWQVVCNITQ KG+SPRCCVSFSAYYNESIIPC+TCACGCPS + TCS A ALLLPSQALL+P ENRT+++ AWA + H PV NPLPC DNCGVSINWH+ TDYRGGWSAR+T+FNW+D +F DWFAAVELDK A GF++VYSFNGS L+GVNNTI M+G GLNYLV E+D P +D RVPGKQQSVISFTKK PG++I GDGFPTKV+FNGEECSLPRILP+ NSYR+ SS+ S + AL + +QQ
Sbjct: 23 QPT-APSPAADVCNGVFLSYTFTSSRKIPPALRSGQPYRFQSTLLVLNNGLQELKSWRVFVGFQHDEFLVSASNAVLADGSSLPVGVGNGTVFAGYPNSDLKTAIETAGDQTQMGVQVDLVGTQFGVGSPDVPMPQNISLVNDGWLCSKPSTQGKNVMQVCCTQDSKFKANVTT-EEFLPHQNGDLTIMYDVIRTYGSNYWAQVTISNHNPLGRLDNWKLSWDWMRDEFIFAMKGAYPAVVDTSECIFGKQGQFYQDLDFSTALNCERRPTIVDLPLAKTNDTNLGMIPFCCRNGTILPPSMDPSKSISSFQINVFKMPPDNNRSQLNPPQNWNITGTVNPDYQCGPPVRVSPSEFPDPSGLLSNTAAVASWQVVCNITQPKGASPRCCVSFSAYYNESIIPCQTCACGCPSTSTSTCSAKAPALLLPSQALLIPVENRTQLAKAWAGLHHFPVPNPLPCADNCGVSINWHVATDYRGGWSARITIFNWDDSSFPDWFAAVELDKTASGFEKVYSFNGSTLSGVNNTIVMQGKEGLNYLVAESDGADPQKDFRVPGKQQSVISFTKKNIPGVDIAGGDGFPTKVYFNGEECSLPRILPTNNSYRMGSSIIISLIFALAVFSFMQQ 645
BLAST of DCAR_030488 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6X0A1 ((COBRA-like protein 7 {ECO:0000313|RefSeq:XP_027121029.1}))
HSP 1 Score: 970.689 bits (2508), Expect = 0.000e+0
Identity = 450/628 (71.66%), Postives = 536/628 (85.35%), Query Frame = 0
Match: A0A6P6X0A1 ((COBRA-like protein 7 {ECO:0000313|RefSeq:XP_027121029.1}))
HSP 1 Score: 970.689 bits (2508), Expect = 0.000e+0
Identity = 450/628 (71.66%), Postives = 536/628 (85.35%), Query Frame = 0
Query: 21 QPTVAPPPSSATCNEIFISYTVTSVKKIPPTQKR---NQPYRFESSLFVVNNGLDELKSWRVFVGFRNEEVLVSASNAVLSDGTSLPGKVGNGSVFVGYPNADLKTGVETAGDLSQMSVKVDLVGTEFGVGAGSFPLPSNVSLVNDGFLCPKPTLQGKNQMELCCTKDPKFKSNVTEDEEFLRRQDGDLTIMYDVTKTYESYYWADVTISNHNPLGRLDNWKLNWDWMRDEFIYTMKGAYPSVLDSSNCIYGRQGEFYKTMDFSTVMNCQRRPTIVDLPLTKTNDTALGLVPFCCRNGTILPPTMDPSKSISAFQMQVYKMPPDLNRSQLSPPQNWKISGRLNPDYVCGPPVRVSPSRFSDPSGL-SDSTAVASWQVVCNITQAKGSSPRCCVSFSAYYNESIIPCKTCACGCPSNTARTCSTSASALLLPSQALLVPFENRTRMSLAWADIKHLPVSNPLPCGDNCGVSINWHLLTDYRGGWSARMTVFNWEDEAFVDWFAAVELDKAALGFKEVYSFNGSALNGVNNTIFMEGLPGLNYLVGETDAPRPDRDPRVPGKQQSVISFTKKKTPGINIPAGDGFPTKVFFNGEECSLPRILPSGNSYRLHSSVSTSFVLALVILVLIQQ 644
QPT AP P++ CN +F+SYT TS +KIPPT + QPYRF+S+L V+NNGL ELKSWRVFVGF+++E LVSASNAVL+DG+SLP VGNG+VF GYPN+DLKT +ETAGD +QM V+VDLVGT+FGVG+ P+P N+SLVNDG+LCPKP+ QGKN M++CCT+D KFK+NVT EEFL RQ+GDLTIMYDV +TY+S YWA VTISNHNPLGRLDNWKL+WDWMRDEFI+ MKGAYP+V+D+S CI+G+QG+FY+ +DFST +NC+RRPTI+DLPL KTNDT LG++PFCCRNGTILPP+MDPSKSIS+FQ+ V+KMPPD NRSQL+PPQNW I+G +NPDY CGPPVRVSPS F DPSGL S++ AVASWQVVCNITQ KG+SPRCCVSFSAYYNESIIPC+TCACGCPS + TCS A ALLLPSQALL+P ENRT+++ AWA + H PV NPLPC DNCGVSINWH+ TDY GGWSAR+T+FNW+D +F DWFAAVELDK A GF++VYSFNGS L+GVNNTI M+G+ GLNYLV E+D P +D RVPGKQQSVISFTKK PG++I GDGFPTKV+FNGEECSLPRILP+ NSYR+ SS+ S + AL + + +QQ
Sbjct: 25 QPT-APSPAADVCNGVFLSYTFTSSRKIPPTLRSVPARQPYRFQSTLHVLNNGLQELKSWRVFVGFQHDEFLVSASNAVLADGSSLPVGVGNGTVFAGYPNSDLKTAIETAGDQTQMGVQVDLVGTQFGVGSPDVPMPQNISLVNDGWLCPKPSTQGKNVMQVCCTQDSKFKANVTT-EEFLPRQNGDLTIMYDVIRTYDSNYWAQVTISNHNPLGRLDNWKLSWDWMRDEFIFAMKGAYPAVVDTSECIFGKQGQFYRDLDFSTALNCERRPTIIDLPLAKTNDTNLGMIPFCCRNGTILPPSMDPSKSISSFQINVFKMPPDNNRSQLNPPQNWNITGTVNPDYQCGPPVRVSPSEFPDPSGLLSNTAAVASWQVVCNITQPKGASPRCCVSFSAYYNESIIPCQTCACGCPSTSTSTCSAKAPALLLPSQALLIPVENRTQLAKAWAGLHHFPVPNPLPCADNCGVSINWHVATDYSGGWSARITIFNWDDFSFPDWFAAVELDKTASGFEKVYSFNGSTLSGVNNTIVMQGMEGLNYLVAESDGADPQKDFRVPGKQQSVISFTKKNIPGVDIAGGDGFPTKVYFNGEECSLPRILPTNNSYRMGSSIIISLIFALAVFLFMQQ 650
BLAST of DCAR_030488 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2Z7CXC1 ((COBRA-like protein 7-like {ECO:0000313|EMBL:KZV50985.1}))
HSP 1 Score: 969.918 bits (2506), Expect = 0.000e+0
Identity = 448/619 (72.37%), Postives = 531/619 (85.78%), Query Frame = 0
Match: A0A2Z7CXC1 ((COBRA-like protein 7-like {ECO:0000313|EMBL:KZV50985.1}))
HSP 1 Score: 969.918 bits (2506), Expect = 0.000e+0
Identity = 448/619 (72.37%), Postives = 531/619 (85.78%), Query Frame = 0
Query: 30 SATCNEIFISYTVTSVKKIPPTQKRN---QPYRFESSLFVVNNGLDELKSWRVFVGFRNEEVLVSASNAVLSDGTSLPGKVGNGSVFVGYPNADLKTGVETAGDLSQMSVKVDLVGTEFGVGAGSFPLPSNVSLVNDGFLCPKPTLQGKNQMELCCTKDPKFKSNVTEDEEFLRRQDGDLTIMYDVTKTYESYYWADVTISNHNPLGRLDNWKLNWDWMRDEFIYTMKGAYPSVLDSSNCIYGRQGEFYKTMDFSTVMNCQRRPTIVDLPLTKTNDTALGLVPFCCRNGTILPPTMDPSKSISAFQMQVYKMPPDLNRSQLSPPQNWKISGRLNPDYVCGPPVRVSPSRFSDPS-GLSDSTAVASWQVVCNITQAKGSSPRCCVSFSAYYNESIIPCKTCACGCPSNTARTCSTSASALLLPSQALLVPFENRTRMSLAWADIKHLPVSNPLPCGDNCGVSINWHLLTDYRGGWSARMTVFNWEDEAFVDWFAAVELDKAALGFKEVYSFNGSALNGVNNTIFMEGLPGLNYLVGETDAPRPDRDPRVPGKQQSVISFTKKKTPGINIPAGDGFPTKVFFNGEECSLPRILPSGNSYRLHSSVSTSFVLALVILVLIQQ 644
S C +F+SYT TS K +PP + + Q YRFES L ++NN L ELKSWRVFVGF+++E LVSASNAVL+DG S+PG VGNG+VF GYP DLK+G+ETAGDL+QMSV+V LVGT+FGVG S P+PSN+SLVNDG++CPKP++QG + M++CCT+DPKFKSN+T D+EFLRRQ+GD+TIMYDV +TYE+ YWA VTI NH+PL RLDNW+L+WDWM DEFI+ MKGAYPSV+D+S C++G QG+FY+++DFST +NC RRPTIVDLPL KTNDT LG++PFCCRNGTILPP MDPSKS SAFQ+ V+KMPP+LNRS L PPQNW I GRLNPDY CGPPVRVSPS+F DPS L +S+A+ASWQVVCNITQ KG SPRCCVSFSAYYNESIIPC+TCACGCP+NT +TCS+++ AL LPSQALLVPFENRT ++ AWA++ H P+SNPLPC DNCGVSINWHL TDYRGGWSAR+T+FNW+D FVDWF A+E +KAA GF+ VYSFNGSALNGVNNTIFM+GLPGLNYLV ET+ P RDPRVPGKQQSV+SFTKK TPGINIPAGDGFP+KV+FNGEECSLP+ILP+ SYRL SSV+ SF+L V V +QQ
Sbjct: 35 SDDCKGVFLSYTYTSGKVVPPILRSDPARQAYRFESFLSLLNNDLVELKSWRVFVGFQHDEYLVSASNAVLADGNSIPGSVGNGTVFAGYPVPDLKSGIETAGDLTQMSVRVGLVGTQFGVGFPSVPMPSNISLVNDGWICPKPSVQGNSTMQVCCTRDPKFKSNITMDDEFLRRQNGDITIMYDVMRTYEANYWAQVTIENHSPLARLDNWQLSWDWMEDEFIFAMKGAYPSVVDTSKCVFGVQGQFYQSLDFSTALNCDRRPTIVDLPLAKTNDTNLGMIPFCCRNGTILPPAMDPSKSKSAFQINVFKMPPNLNRSDLVPPQNWGIEGRLNPDYKCGPPVRVSPSQFPDPSLLLPNSSAIASWQVVCNITQPKGVSPRCCVSFSAYYNESIIPCQTCACGCPTNTDQTCSSTSPALFLPSQALLVPFENRTTLARAWAELHHFPLSNPLPCSDNCGVSINWHLFTDYRGGWSARITIFNWDDSPFVDWFTALEFEKAAPGFEAVYSFNGSALNGVNNTIFMQGLPGLNYLVAETEGANPQRDPRVPGKQQSVVSFTKKVTPGINIPAGDGFPSKVYFNGEECSLPKILPASGSYRLDSSVALSFLLVFVAFVFVQQ 653
BLAST of DCAR_030488 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9UNB7 ((COBRA-like protein 7 {ECO:0000313|RefSeq:XP_011100811.1}))
HSP 1 Score: 969.533 bits (2505), Expect = 0.000e+0
Identity = 447/619 (72.21%), Postives = 531/619 (85.78%), Query Frame = 0
Match: A0A6I9UNB7 ((COBRA-like protein 7 {ECO:0000313|RefSeq:XP_011100811.1}))
HSP 1 Score: 969.533 bits (2505), Expect = 0.000e+0
Identity = 447/619 (72.21%), Postives = 531/619 (85.78%), Query Frame = 0
Query: 30 SATCNEIFISYTVTSVKKIPPTQKRN---QPYRFESSLFVVNNGLDELKSWRVFVGFRNEEVLVSASNAVLSDGTSLPGKVGNGSVFVGYPNADLKTGVETAGDLSQMSVKVDLVGTEFGVGAGSFPLPSNVSLVNDGFLCPKPTLQGKNQMELCCTKDPKFKSNVTEDEEFLRRQDGDLTIMYDVTKTYESYYWADVTISNHNPLGRLDNWKLNWDWMRDEFIYTMKGAYPSVLDSSNCIYGRQGEFYKTMDFSTVMNCQRRPTIVDLPLTKTNDTALGLVPFCCRNGTILPPTMDPSKSISAFQMQVYKMPPDLNRSQLSPPQNWKISGRLNPDYVCGPPVRVSPSRFSDPSG-LSDSTAVASWQVVCNITQAKGSSPRCCVSFSAYYNESIIPCKTCACGCPSNTARTCSTSASALLLPSQALLVPFENRTRMSLAWADIKHLPVSNPLPCGDNCGVSINWHLLTDYRGGWSARMTVFNWEDEAFVDWFAAVELDKAALGFKEVYSFNGSALNGVNNTIFMEGLPGLNYLVGETDAPRPDRDPRVPGKQQSVISFTKKKTPGINIPAGDGFPTKVFFNGEECSLPRILPSGNSYRLHSSVSTSFVLALVILVLIQQ 644
S CN IF+SY+ ++ +++PP K + Q YRFES+ ++NN L++LKSWRVFVGF+++E LVSASNAVL+DG S+PG V NG+VF G+PN DLKT +ETAGDL+QMS +V+LVGT+FGV P+P+N+SLVNDG++CPKPT+QG +++CCT+DPKFKSNVT D EFL RQ+GDLTI+YDVT+TYES YWA V I NHNPLGRLDNW+L+WDWM DEFI+ MKGAYPSV+D+S+C++G+QG+FYK +DFS +NC RRPTIVDLPL KTNDT LG++PFCCRNGTILPP MDPSKS SAFQ+ V+KMPP+LNRS L PPQNW I GRLNPDY CGPPVRVSPS+F DPSG L DS A+ASWQVVCNITQAKGSSPRCCVSFSAYYNESIIPC+TCACGCP+NT RTCS++A ALLLPSQALLVPF+NR+ ++ AWAD+ H PV NPLPC DNCGVS+NWHL TD+RGGWSAR+T+FNW+D AF DWF AVELDKAA GF+ VYSFNG+ L GVNNTIFM+GLPGLNYLV ETDA P +DPRVPGKQQSVISFTKK TPGINIPAGDGFP+KV+FNGEECSLP++LP+ NS RL SSV SFVL + + + +QQ
Sbjct: 36 SDACNGIFLSYSYSTGRRVPPILKSDPTRQAYRFESAFSILNNDLEDLKSWRVFVGFQHDEYLVSASNAVLADGNSIPGSVVNGTVFAGFPNPDLKTAIETAGDLTQMSARVELVGTQFGVAPPDAPMPTNISLVNDGWVCPKPTMQGNRTLQVCCTRDPKFKSNVTIDGEFLPRQNGDLTIIYDVTRTYESSYWAQVMIENHNPLGRLDNWQLSWDWMEDEFIFAMKGAYPSVVDTSDCVFGKQGQFYKDLDFSNALNCDRRPTIVDLPLEKTNDTTLGMIPFCCRNGTILPPAMDPSKSKSAFQLNVFKMPPNLNRSYLIPPQNWGIKGRLNPDYKCGPPVRVSPSQFPDPSGLLPDSAAMASWQVVCNITQAKGSSPRCCVSFSAYYNESIIPCQTCACGCPANTDRTCSSTAPALLLPSQALLVPFDNRSMLARAWADLHHFPVPNPLPCSDNCGVSLNWHLFTDFRGGWSARITIFNWDDFAFADWFTAVELDKAAPGFEAVYSFNGTTLEGVNNTIFMQGLPGLNYLVAETDAANPQKDPRVPGKQQSVISFTKKLTPGINIPAGDGFPSKVYFNGEECSLPKLLPTSNSDRLGSSVFLSFVLLVFLFMFMQQ 654
BLAST of DCAR_030488 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A835D970 ((Uncharacterized protein {ECO:0000313|EMBL:KAF8394621.1}))
HSP 1 Score: 969.148 bits (2504), Expect = 0.000e+0
Identity = 444/628 (70.70%), Postives = 539/628 (85.83%), Query Frame = 0
Match: A0A835D970 ((Uncharacterized protein {ECO:0000313|EMBL:KAF8394621.1}))
HSP 1 Score: 969.148 bits (2504), Expect = 0.000e+0
Identity = 444/628 (70.70%), Postives = 539/628 (85.83%), Query Frame = 0
Query: 6 FFIITIALLLPISAPQPTVAPPPSSATCNEIFISYTVTSVKKIPPTQKRN---QPYRFESSLFVVNNGLDELKSWRVFVGFRNEEVLVSASNAVLSDGTSLPGKVGNGSVFVGYPNADLKTGVETAGDLSQMSVKVDLVGTEFGVGAGSFPLPSNVSLVNDGFLCPKPTLQGKNQMELCCTKDPKFKSNVTEDEEFLRRQDGDLTIMYDVTKTYESYYWADVTISNHNPLGRLDNWKLNWDWMRDEFIYTMKGAYPSVLDSSNCIYGRQGEFYKTMDFSTVMNCQRRPTIVDLPLTKTNDTALGLVPFCCRNGTILPPTMDPSKSISAFQMQVYKMPPDLNRSQLSPPQNWKISGRLNPDYVCGPPVRVSPSRFSDPSG-LSDSTAVASWQVVCNITQAKGSSPRCCVSFSAYYNESIIPCKTCACGCPSNTARTCSTSASALLLPSQALLVPFENRTRMSLAWADIKHLPVSNPLPCGDNCGVSINWHLLTDYRGGWSARMTVFNWEDEAFVDWFAAVELDKAALGFKEVYSFNGSALNGVNNTIFMEGLPGLNYLVGETDAPRPDRDPRVPGKQQSVISFTKKKTPGINIPAGDGFPTKVFFNGEECSLPRILPSGNSYRLHSSVS 629
FFI ++ LPIS QP AP P+S +CN +F+SY TS +++PP K + QPYRF+S++ ++NNGL+ELKSW++FVGF+N+E LVSAS+AVLSDGTSLPGKVGNG++F G+P DLKT +ETAGDL+QM V++ LVGT+FGVGA + P+PSN++L NDGF+CP+ TLQGKN+M +CCTKD FKSN+T DE FL RQ+GDL IMYDV ++Y++ YWA VTISNHNP+GRLDNW+L+WDWM+DEFI+ MKGAYPSVLD+++CI+GRQGE+YK +DFST++NC+RRP I+DLPLTK ND+ LGL+PFCCRNGTILPP+MDPSKS+S FQ+ V+KMPPDLNR+QL PPQNWKI+G LNPDY CGPPVRVSPSRF +PSG LSDSTAVASWQVVCNITQAKG+SPRCCVSFS++YN+S+IPC+TCACGCP N CSTSA ALLLPS+ALLVPFENR + S AWAD+KH V NPLPCGDNCGVSINWH+ TDYR GWSAR+++FNW++ F DWFAAV+LDKAA GF+ +YSFNGS L+G NNTIFM+GLPGLNYLV E D P+ DPRVPGKQQSVISF+KKKTPGI + +GDGFPTKVFFNGEECSLP I+P+ N YR+ + S
Sbjct: 12 FFIFINSIFLPISISQPQ-APSPASDSCNGVFLSYLYTSGERLPPILKSHPSRQPYRFQSTVTILNNGLEELKSWKIFVGFQNDEFLVSASHAVLSDGTSLPGKVGNGTLFAGFPATDLKTAIETAGDLTQMQVQIQLVGTQFGVGAPNVPMPSNITLANDGFVCPRSTLQGKNEMHVCCTKDLNFKSNITLDEGFLPRQNGDLAIMYDVIRSYDTNYWAQVTISNHNPIGRLDNWRLSWDWMKDEFIFAMKGAYPSVLDTTDCIFGRQGEYYKGLDFSTILNCERRPIIIDLPLTKANDSNLGLIPFCCRNGTILPPSMDPSKSMSVFQINVFKMPPDLNRTQLIPPQNWKINGTLNPDYQCGPPVRVSPSRFPNPSGLLSDSTAVASWQVVCNITQAKGASPRCCVSFSSFYNDSVIPCQTCACGCPHNPTNNCSTSAPALLLPSEALLVPFENRAQKSQAWADLKHQTVPNPLPCGDNCGVSINWHVYTDYRRGWSARISLFNWDETDFSDWFAAVQLDKAAPGFEAMYSFNGSVLHGANNTIFMQGLPGLNYLVAERDGANPENDPRVPGKQQSVISFSKKKTPGIKVSSGDGFPTKVFFNGEECSLPTIVPTNNGYRMAKATS 638
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7BAD9 | E-Value: 0.000e+0, PID: 70.52 | (Putative COBRA-like protein 7 {ECO:0000313|EMBL:M... [more] |
| A0A1U7YQR5 | E-Value: 0.000e+0, PID: 71.27 | (COBRA-like protein 7 {ECO:0000313|RefSeq:XP_00980... [more] |
| A0A1J6II23 | E-Value: 0.000e+0, PID: 71.01 | (Cobra-like protein 7 {ECO:0000313|EMBL:OIS98554.1... [more] |
| A0A1S4A954 | E-Value: 0.000e+0, PID: 71.10 | (COBRA-like protein 7 {ECO:0000313|RefSeq:XP_01647... [more] |
| A0A068TTY2 | E-Value: 0.000e+0, PID: 72.16 | (Uncharacterized protein {ECO:0000313|EMBL:CDO9880... [more] |
| A0A6P6WKF4 | E-Value: 0.000e+0, PID: 71.84 | (COBRA-like protein 7 {ECO:0000313|RefSeq:XP_02711... [more] |
| A0A6P6X0A1 | E-Value: 0.000e+0, PID: 71.66 | (COBRA-like protein 7 {ECO:0000313|RefSeq:XP_02712... [more] |
| A0A2Z7CXC1 | E-Value: 0.000e+0, PID: 72.37 | (COBRA-like protein 7-like {ECO:0000313|EMBL:KZV50... [more] |
| A0A6I9UNB7 | E-Value: 0.000e+0, PID: 72.21 | (COBRA-like protein 7 {ECO:0000313|RefSeq:XP_01110... [more] |
| A0A835D970 | E-Value: 0.000e+0, PID: 70.70 | (Uncharacterized protein {ECO:0000313|EMBL:KAF8394... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |