Resource Type:
Polypeptide
Name:
DCAR_031004
Identifier:
DCAR_031004.mRNA-protein
Sequence:
MAGQKNDYGKRSHYQSDYSGNGGSKRRNPTDDRESHAIGPDDTVYRYLCP
VRKIGSIIGRGGDIAKQLRQETRAKIRINETVPGCEERVVIIYSSSEETN
SFGDSGDLVSPAQDALFKVHDRIVAEDAPADDEFEEPHQVTVRMLVPSDQ
IGCVIGKGGQVIQTIRSETRAQIRVLSSEQHLPTCASNSDELLQISGEGP
VVKKALYQLACRLHDNPSRSQHLLLSSATIQRSEGAYIPSAGAPIMGVGS
LMGPYGGYRSDARDWPASVKEFSLRLVCPTENIGAVIGKGGSIIKQIRQE
SGASIKVDSSAAEGDDCIISVSAKEAFEESSPTIDATMRLQPRCSEKTEK
DSGDSVITTRLLVPSSRIGCLLGKGGSIISEMRNATRASIRILSKEDLPK
VAHEDDEMVQITGDLDVATNALLQVMMRLRSNTFEMEGALLAPAVPYLPM
PVDMSDSPRYESRDSKSRGRGYSSSSRYESNDYPPNDAYGSYGGSQGGGS
GYGAYGVYSGRSGGSGLYGESPVSYGKHHGY*
Sequence Length:
532
Sequence Checksum:
73a87809222829b0ef0543a46627c77e
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_031004, derives from mRNA, DCAR_031004. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_031004 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_031004 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7ARD2 ((Uncharacterized protein {ECO:0000313|EMBL:MPA59169.1}) (Fragment))
HSP 1 Score: 793.497 bits (2048), Expect = 0.000e+0
Identity = 404/537 (75.23%), Postives = 465/537 (86.59%), Query Frame = 0
Match: A0A5B7ARD2 ((Uncharacterized protein {ECO:0000313|EMBL:MPA59169.1}) (Fragment))
HSP 1 Score: 793.497 bits (2048), Expect = 0.000e+0
Identity = 404/537 (75.23%), Postives = 465/537 (86.59%), Query Frame = 0
Query: 1 MAGQKNDYGKRSHYQSDYSGNGGSKRRNPTDDRESHAIGPDDTVYRYLCPVRKIGSIIGRGGDIAKQLRQETRAKIRINETVPGCEERVVIIYSSSEETNSFGDSGDLVSPAQDALFKVHDRIVAEDAPADDEFEEPHQVTVRMLVPSDQIGCVIGKGGQVIQTIRSETRAQIRVLSSEQHLPTCASNSDELLQISGEGPVVKKALYQLACRLHDNPSRSQHLLLSSATIQRSEGAYI-PSAGAPIMGVGSLMGPYGGYRSDARDWPASVKEFSLRLVCPTENIGAVIGKGGSIIKQIRQESGASIKVDSSAAEGDDCIISVSAKEAFEESSPTIDATMRLQPRCSEKTEKDSGDSVITTRLLVPSSRIGCLLGKGGSIISEMRNATRASIRILSKEDLPKVAHEDDEMVQITGDLDVATNALLQVMMRLRSNTFEMEGAL--LAPAVPYLPMPVDMSDSPRYESRDSKSRGRGYSS-SSRYESNDYPPNDAYGSYGGSQGGGSGYGAYGVY--SGRSGGSGLYGESPVSYGKHHGY 531
MAGQ+ND+GKRSH QSD+SGNGGSKRRNP+D+R+ HAIG +DTVYRYLCPV++IGSIIG+GGDIAKQLR ET++KIRI ETVPGCEERVV IYSSSEETN+F D+ + VSPAQDALF+VHDR+VAE++ ADDEFEE Q TVRMLVPSDQIGC+IGKGGQVIQ +RSETRAQIRVLSSE HLP CA NSDELLQI+GE VV+ ALYQ+A RLHDNPSRSQHLLLSS+TI +S G ++ P+AGAP MGV SLMGP+GGYRSD DW ASVKEFSLRLVCPT+NIG VIGKGG+II QIRQESGASIKVDSS+AEGDDCIIS+SAKE FE++SPTIDA MRLQPRCS+K EK+SGDSV+TTRLLVPSSRIGCL+GKGG+IISEMRN TRASIRILSK++LPKVA ED+EMVQITGDL+VA+NALLQV MRL++N FEMEGAL L PA+PYLPM V +SD +Y +RD KSRG GYS+ S + S+D PP+D+YG YGG Q GG SGRSG +GL ++PVS GK+HGY
Sbjct: 90 MAGQRNDHGKRSHSQSDFSGNGGSKRRNPSDERDQHAIGSEDTVYRYLCPVKRIGSIIGKGGDIAKQLRSETQSKIRIGETVPGCEERVVTIYSSSEETNNFEDTDEHVSPAQDALFRVHDRVVAEESLADDEFEESQQFTVRMLVPSDQIGCIIGKGGQVIQNMRSETRAQIRVLSSE-HLPPCALNSDELLQITGEASVVRNALYQVASRLHDNPSRSQHLLLSSSTIYKSGGTFMGPNAGAPFMGVTSLMGPHGGYRSDVGDWSASVKEFSLRLVCPTDNIGGVIGKGGAIINQIRQESGASIKVDSSSAEGDDCIISISAKEVFEDTSPTIDAAMRLQPRCSQKAEKESGDSVLTTRLLVPSSRIGCLIGKGGAIISEMRNITRASIRILSKDNLPKVASEDEEMVQITGDLNVASNALLQVTMRLKANVFEMEGALATLPPALPYLPMSVGISDGSKYGNRDGKSRGHGYSTYSDGHGSSDLPPSDSYGGYGGVQSGGGSGYGPYGIYSSGRSGSAGLSSQNPVSRGKNHGY 625
BLAST of DCAR_031004 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AR23 ((Uncharacterized protein {ECO:0000313|EMBL:MPA59170.1}) (Fragment))
HSP 1 Score: 790.415 bits (2040), Expect = 0.000e+0
Identity = 405/537 (75.42%), Postives = 464/537 (86.41%), Query Frame = 0
Match: A0A5B7AR23 ((Uncharacterized protein {ECO:0000313|EMBL:MPA59170.1}) (Fragment))
HSP 1 Score: 790.415 bits (2040), Expect = 0.000e+0
Identity = 405/537 (75.42%), Postives = 464/537 (86.41%), Query Frame = 0
Query: 1 MAGQKNDYGKRSHYQSDYSGNGGSKRRNPTDDRESHAIGPDDTVYRYLCPVRKIGSIIGRGGDIAKQLRQETRAKIRINETVPGCEERVVIIYSSSEETNSFGDSGDLVSPAQDALFKVHDRIVAEDAPADDEFEEPHQVTVRMLVPSDQIGCVIGKGGQVIQTIRSETRAQIRVLSSEQHLPTCASNSDELLQISGEGPVVKKALYQLACRLHDNPSRSQHLLLSSATIQRSEGAYI-PSAGAPIMGVGSLMGPYGGYRSDARDWPASVKEFSLRLVCPTENIGAVIGKGGSIIKQIRQESGASIKVDSSAAEGDDCIISVSAKEAFEESSPTIDATMRLQPRCSEKTEKDSGDSVITTRLLVPSSRIGCLLGKGGSIISEMRNATRASIRILSKEDLPKVAHEDDEMVQITGDLDVATNALLQVMMRLRSNTFEMEGAL--LAPAVPYLPMPVDMSDSPRYESRDSKSRGRGYSS-SSRYESNDYPPNDAYGSYGGSQGGGSGYGAYGVY--SGRSGGSGLYGESPVSYGKHHGY 531
MAGQ+ND+GKRSH QSD+SGNGGSKRRNP+D+R+ HAIG +DTVYRYLCPV++IGSIIG+GGDIAKQLR ET++KIRI ETVPGCEERVV IYSSSEETN+F D+ + VSPAQDALF+VHDR+VAE++ ADDEFEEP QVTVRMLVP DQIGC+IGKGGQVIQ +RSET AQIRVLSSE HLP CA +SDELLQI+G+ PVV+KALYQ+A RLHDNPSRSQHLLLSS+TI +S G Y+ P+AGAP+MGV SLMGPYGGY+SD DW ASVKEFSLRLVCPTENIG VIGKGG+II QIRQESGASIKVDSS AEGDDCIIS+SAKE FE+ SPTIDA MRLQPRCS+K EK+SGDSVITTRL VPSSRIGCL+GKGGSIISEMRN TRASIRILSKE+LP+VA ED+EMVQITGDL+VA+NAL QV +RL++N FEMEGAL L PA+PYLPM V +SD +Y +RD KSRG GYS+ S + S+D PP+D+YG YGG Q GG SGRSG +GL ++PVS GK+HGY
Sbjct: 95 MAGQRNDHGKRSHSQSDFSGNGGSKRRNPSDERDQHAIGSEDTVYRYLCPVKRIGSIIGKGGDIAKQLRSETQSKIRIGETVPGCEERVVTIYSSSEETNNFEDTDEHVSPAQDALFRVHDRVVAEESLADDEFEEPQQVTVRMLVPPDQIGCIIGKGGQVIQNMRSETCAQIRVLSSE-HLPPCALSSDELLQITGDAPVVRKALYQVASRLHDNPSRSQHLLLSSSTIYKSGGTYMGPNAGAPLMGVTSLMGPYGGYKSDTGDWSASVKEFSLRLVCPTENIGGVIGKGGAIINQIRQESGASIKVDSSGAEGDDCIISISAKELFEDPSPTIDAAMRLQPRCSQKAEKESGDSVITTRLFVPSSRIGCLIGKGGSIISEMRNVTRASIRILSKENLPRVASEDEEMVQITGDLNVASNALYQVTIRLKANLFEMEGALATLPPALPYLPMSVGISDGSKYGNRDGKSRGHGYSTYSDGHGSSDLPPSDSYGGYGGVQSGGGSGYGPYGIYSSGRSGSAGLSSQNPVSRGKNHGY 630
BLAST of DCAR_031004 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AR38 ((Uncharacterized protein {ECO:0000313|EMBL:MPA59167.1}) (Fragment))
HSP 1 Score: 789.645 bits (2038), Expect = 0.000e+0
Identity = 399/535 (74.58%), Postives = 454/535 (84.86%), Query Frame = 0
Match: A0A5B7AR38 ((Uncharacterized protein {ECO:0000313|EMBL:MPA59167.1}) (Fragment))
HSP 1 Score: 789.645 bits (2038), Expect = 0.000e+0
Identity = 399/535 (74.58%), Postives = 454/535 (84.86%), Query Frame = 0
Query: 1 MAGQKNDYGKRSHYQSDYSGNGGSKRRNPTDDRESHAIGPDDTVYRYLCPVRKIGSIIGRGGDIAKQLRQETRAKIRINETVPGCEERVVIIYSSSEETNSFGDSGDLVSPAQDALFKVHDRIVAEDAPADDEFEEPHQVTVRMLVPSDQIGCVIGKGGQVIQTIRSETRAQIRVLSSEQHLPTCASNSDELLQISGEGPVVKKALYQLACRLHDNPSRSQHLLLSSATIQRSEGAYI-PSAGAPIMGVGSLMGPYGGYRSDARDWPASVKEFSLRLVCPTENIGAVIGKGGSIIKQIRQESGASIKVDSSAAEGDDCIISVSAKEAFEESSPTIDATMRLQPRCSEKTEKDSGDSVITTRLLVPSSRIGCLLGKGGSIISEMRNATRASIRILSKEDLPKVAHEDDEMVQITGDLDVATNALLQVMMRLRSNTFEMEGAL--LAPAVPYLPMPVDMSDSPRYESRDSKSRGRGYSSSSR-YESNDYPPNDAYGSYGGSQGGGSGYGAYGVYSGRSGGSGLYGESPVSYGKHHGY 531
MAGQ+ND+GKRSH QSD+SGNGGSKRRNP+D+R+ HAIG +DTVYRYLCPV++IGSIIG+GGDIAKQLR ET++KIRI ETVPGCEERVV IYSSSEETN+F D+ + VSPAQDALF+VHDR+VAE++ ADDEFEE Q TVRMLVPSDQIGC+IGKGGQVIQ +RSET AQIRVLSSE HLP CA +SDELLQI+G+ PVV+KALYQ+A RLHDNPSRSQHLLLSS+TI +S G Y+ P+AGAP+MGV SLMGPYGGY+SD DW ASVKEFSLRLVCPT+NIG VIGKGG+II QIRQESGASIKVDSS AEGDDCIIS+SAKE FE+ SPTIDA MRLQPRCS+K EK+SGDSVITTRL VPSSRIGCL+GKGGSIISEMRN TRASIRILSKE+LP+VA ED+EMVQITGDL+VA+NAL QV +RL++N FEMEGAL L PA+PYLPM VD+S+ RY +RDSKSRG GYS+ S Y S+D N S GG SGRSG +GL G + V GKHHGY
Sbjct: 95 MAGQRNDHGKRSHSQSDFSGNGGSKRRNPSDERDQHAIGSEDTVYRYLCPVKRIGSIIGKGGDIAKQLRSETQSKIRIGETVPGCEERVVTIYSSSEETNNFEDTDEHVSPAQDALFRVHDRVVAEESLADDEFEESQQFTVRMLVPSDQIGCIIGKGGQVIQNMRSETCAQIRVLSSE-HLPPCALSSDELLQITGDAPVVRKALYQVASRLHDNPSRSQHLLLSSSTIYKSGGTYMGPNAGAPLMGVTSLMGPYGGYKSDTGDWSASVKEFSLRLVCPTDNIGGVIGKGGAIINQIRQESGASIKVDSSGAEGDDCIISISAKELFEDPSPTIDAAMRLQPRCSQKAEKESGDSVITTRLFVPSSRIGCLIGKGGSIISEMRNVTRASIRILSKENLPRVASEDEEMVQITGDLNVASNALYQVTIRLKANLFEMEGALATLPPALPYLPMSVDISEGSRYGNRDSKSRGHGYSTHSDGYGSSDLRDNSGSYGGLQSGGGSGYGAYGIYSSGRSGSAGLSGHNSVPRGKHHGY 628
BLAST of DCAR_031004 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A103XVS6 ((K Homology domain-containing protein {ECO:0000313|EMBL:KVH97785.1}))
HSP 1 Score: 789.26 bits (2037), Expect = 0.000e+0
Identity = 396/537 (73.74%), Postives = 452/537 (84.17%), Query Frame = 0
Match: A0A103XVS6 ((K Homology domain-containing protein {ECO:0000313|EMBL:KVH97785.1}))
HSP 1 Score: 789.26 bits (2037), Expect = 0.000e+0
Identity = 396/537 (73.74%), Postives = 452/537 (84.17%), Query Frame = 0
Query: 1 MAGQKNDYGKRSHYQSDYSGNGGSKRRNPTDDRESHAIGPDDTVYRYLCPVRKIGSIIGRGGDIAKQLRQETRAKIRINETVPGCEERVVIIYSSSEETNSFGDSGDLVSPAQDALFKVHDRIVAEDAPADDEFEEPHQVTVRMLVPSDQIGCVIGKGGQVIQTIRSETRAQIRVLSSEQHLPTCASNSDELLQISGEGPVVKKALYQLACRLHDNPSRSQHLLLSSATIQRSEGAYI-PSAGAPIMGVGSLMGPYGGYRSDARDWPASVKEFSLRLVCPTENIGAVIGKGGSIIKQIRQESGASIKVDSSAAEGDDCIISVSAKEA---FEESSPTIDATMRLQPRCSEKTEKDSGDSVITTRLLVPSSRIGCLLGKGGSIISEMRNATRASIRILSKEDLPKVAHEDDEMVQITGDLDVATNALLQVMMRLRSNTFEMEG--ALLAPAVPYLPMPVDMSDSPRYESRDSKSRGRGYSSSSRYESNDYPPNDAYGSYGGSQGGGSGYGAYGVYSGRSGGSGLYGESPVSYGKHHGY 531
MAGQKNDY KRSHYQ D+ G+ G KR NP D+RESHAIGP+DTVYRYLCP R+IGSIIGRGG+I KQLR +T+AKIRINE+VPGCEERVVIIYSS EETNSFGDS DLVSPAQDALFKVHDRI+AE+AP DDE +E QVTVRMLVPSDQIGCVIGKGGQV+QTIRSETRAQIR+LS E HLP CA ++DELLQISGE VV+ ALYQLA RLHDNPSRSQHL LSS+ + R+ G Y+ P++G P+MGV SLMGPYG Y++D DW AS KEFSLR VCPTENIGAVIGKGG IIKQ+RQESGASIKVDSSAAEGDDC+I+VSAKEA FE+ SPTIDA MRLQPRCSEK+EKDSG V+TTRLLVPSSRIGCL+GKGGSIISEMR+ TRA+IRILS ++L KVA +D+EMVQI+GD++VA++ALLQV RLR+N FEMEG A L PA+P+LPM +DM D+ RY +RD SRGRG++S S + P D +YGGSQ SGYG+YGVYSGRS GL +PVS GKHHGY
Sbjct: 1 MAGQKNDYEKRSHYQPDFPGSEGGKRTNPVDERESHAIGPEDTVYRYLCPGRRIGSIIGRGGEIVKQLRSDTQAKIRINESVPGCEERVVIIYSSGEETNSFGDSDDLVSPAQDALFKVHDRIIAEEAPTDDELDEVQQVTVRMLVPSDQIGCVIGKGGQVVQTIRSETRAQIRILSRE-HLPNCALSTDELLQISGEATVVRNALYQLASRLHDNPSRSQHLFLSSSNLHRAGGGYVGPNSGPPLMGVVSLMGPYGSYKNDGGDWAASAKEFSLRFVCPTENIGAVIGKGGVIIKQMRQESGASIKVDSSAAEGDDCLITVSAKEACIVFEDPSPTIDAAMRLQPRCSEKSEKDSGIYVLTTRLLVPSSRIGCLIGKGGSIISEMRSLTRANIRILSNDNLTKVASDDEEMVQISGDINVASSALLQVTTRLRANVFEMEGTRAALPPAIPFLPMSMDMPDASRYGNRDGNSRGRGHASHSGRYDPELPSAD---NYGGSQIPVSGYGSYGVYSGRSASGGLSSSNPVSQGKHHGY 533
BLAST of DCAR_031004 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7ATK7 ((Uncharacterized protein {ECO:0000313|EMBL:MPA59166.1}) (Fragment))
HSP 1 Score: 774.237 bits (1998), Expect = 0.000e+0
Identity = 382/492 (77.64%), Postives = 437/492 (88.82%), Query Frame = 0
Match: A0A5B7ATK7 ((Uncharacterized protein {ECO:0000313|EMBL:MPA59166.1}) (Fragment))
HSP 1 Score: 774.237 bits (1998), Expect = 0.000e+0
Identity = 382/492 (77.64%), Postives = 437/492 (88.82%), Query Frame = 0
Query: 1 MAGQKNDYGKRSHYQSDYSGNGGSKRRNPTDDRESHAIGPDDTVYRYLCPVRKIGSIIGRGGDIAKQLRQETRAKIRINETVPGCEERVVIIYSSSEETNSFGDSGDLVSPAQDALFKVHDRIVAEDAPADDEFEEPHQVTVRMLVPSDQIGCVIGKGGQVIQTIRSETRAQIRVLSSEQHLPTCASNSDELLQISGEGPVVKKALYQLACRLHDNPSRSQHLLLSSATIQRSEGAYI-PSAGAPIMGVGSLMGPYGGYRSDARDWPASVKEFSLRLVCPTENIGAVIGKGGSIIKQIRQESGASIKVDSSAAEGDDCIISVSAKEAFEESSPTIDATMRLQPRCSEKTEKDSGDSVITTRLLVPSSRIGCLLGKGGSIISEMRNATRASIRILSKEDLPKVAHEDDEMVQITGDLDVATNALLQVMMRLRSNTFEMEGAL--LAPAVPYLPMPVDMSDSPRYESRDSKSRGRGYSS-SSRYESNDYPPNDA 488
MAGQ+ND+GKRSH QSD+SGNGGSKRRNP+D+R+ HAIG +DTVYRYLCPV++IGSIIG+GGDIAKQLR ET++KIRI ETVPGCEERVV IYSSSEETN+F D+ + VSPAQDALF+VHDR+VAE++ ADDEFEEP QVTVRMLVP DQIGC+IGKGGQVIQ +RSET AQIRVLSSE HLP CA +SDELLQI+G+ PVV+KALYQ+A RLHDNPSRSQHLLLSS+TI +S G Y+ P+AGAP+MGV SLMGPYGGY+SD DW ASVKEFSLRLVCPTENIG VIGKGG+II QIRQESGASIKVDSS AEGDDCIIS+SAKE FE+ SPTIDA MRLQPRCS+K EK+SGDSVITTRL VPSSRIGCL+GKGGSIISEMRN TRASIRILSKE+LP+VA ED+EMVQITGDL+VA+NAL QV +RL++N FEMEGAL L PA+PYLPM V +SD +Y +RD KSRG GYS+ S + S+D PP+D+
Sbjct: 93 MAGQRNDHGKRSHSQSDFSGNGGSKRRNPSDERDQHAIGSEDTVYRYLCPVKRIGSIIGKGGDIAKQLRSETQSKIRIGETVPGCEERVVTIYSSSEETNNFEDTDEHVSPAQDALFRVHDRVVAEESLADDEFEEPQQVTVRMLVPPDQIGCIIGKGGQVIQNMRSETCAQIRVLSSE-HLPPCALSSDELLQITGDAPVVRKALYQVASRLHDNPSRSQHLLLSSSTIYKSGGTYMGPNAGAPLMGVTSLMGPYGGYKSDTGDWSASVKEFSLRLVCPTENIGGVIGKGGAIINQIRQESGASIKVDSSGAEGDDCIISISAKELFEDPSPTIDAAMRLQPRCSQKAEKESGDSVITTRLFVPSSRIGCLIGKGGSIISEMRNVTRASIRILSKENLPRVASEDEEMVQITGDLNVASNALYQVTIRLKANLFEMEGALATLPPALPYLPMSVGISDGSKYGNRDGKSRGHGYSTYSDGHGSSDLPPSDS 583
BLAST of DCAR_031004 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AT39 ((Uncharacterized protein {ECO:0000313|EMBL:MPA59168.1}))
HSP 1 Score: 770.385 bits (1988), Expect = 0.000e+0
Identity = 400/535 (74.77%), Postives = 455/535 (85.05%), Query Frame = 0
Match: A0A5B7AT39 ((Uncharacterized protein {ECO:0000313|EMBL:MPA59168.1}))
HSP 1 Score: 770.385 bits (1988), Expect = 0.000e+0
Identity = 400/535 (74.77%), Postives = 455/535 (85.05%), Query Frame = 0
Query: 1 MAGQKNDYGKRSHYQSDYSGNGGSKRRNPTDDRESHAIGPDDTVYRYLCPVRKIGSIIGRGGDIAKQLRQETRAKIRINETVPGCEERVVIIYSSSEETNSFGDSGDLVSPAQDALFKVHDRIVAEDAPADDEFEEPHQVTVRMLVPSDQIGCVIGKGGQVIQTIRSETRAQIRVLSSEQHLPTCASNSDELLQISGEGPVVKKALYQLACRLHDNPSRSQHLLLSSATIQRSEGAYI-PSAGAPIMGVGSLMGPYGGYRSDARDWPASVKEFSLRLVCPTENIGAVIGKGGSIIKQIRQESGASIKVDSSAAEGDDCIISVSAKEAFEESSPTIDATMRLQPRCSEKTEKDSGDSVITTRLLVPSSRIGCLLGKGGSIISEMRNATRASIRILSKEDLPKVAHEDDEMVQITGDLDVATNALLQVMMRLRSNTFEMEGAL--LAPAVPYLPMPVDMSDSPRYESRDSKSRGRGYSSSSR-YESNDYPPNDAYGSYGGSQGGGSGYGAYGVYSGRSGGSGLYGESPVSYGKHHGY 531
MAGQ N+YGKRSH+QSDYSGNGGSKRRNPTD+R+ HAIG +DTVYRYLCPV++IGSIIG+GG IAKQLR+ET++KIRI ETVPGCEERVV +YSSSEETN F ++G+ VSPAQDALF+VHDR++AE++ ADDEFEEP QVTVRMLVP DQIGC+IGKGGQVIQ +RSET AQIRVLSSE HLP CA +SDELLQI+G+ PVV+KALYQ+A RLHDNPSRSQHLLLSS+TI +S G Y+ P+AGAP+MGV SLMGPYGGY+SD DW ASVKEFSLRLVCPTENIG VIGKGG+II QIRQESGASIKVDSS AEGDDCIIS+SAKE FE+ SPTIDA MRLQPRCS+K EK+SGDSVITTRL VPSSRIGCL+GKGGSIISEMRN TRASIRILSKE+LP+VA ED+EMVQITGDL+VA+NAL QV +RL++N FEMEGAL L PA+PYLPM VD+S+ RY +RDSKSRG GYS+ S Y S+D N S GG SGRSG +GL G + V GKHHGY
Sbjct: 1 MAGQGNNYGKRSHFQSDYSGNGGSKRRNPTDERDQHAIGSEDTVYRYLCPVKRIGSIIGKGGGIAKQLREETQSKIRIGETVPGCEERVVTLYSSSEETNDFEETGEHVSPAQDALFRVHDRVIAEESLADDEFEEPQQVTVRMLVPPDQIGCIIGKGGQVIQNMRSETCAQIRVLSSE-HLPPCALSSDELLQITGDAPVVRKALYQVASRLHDNPSRSQHLLLSSSTIYKSGGTYMGPNAGAPLMGVTSLMGPYGGYKSDTGDWSASVKEFSLRLVCPTENIGGVIGKGGAIINQIRQESGASIKVDSSGAEGDDCIISISAKELFEDPSPTIDAAMRLQPRCSQKAEKESGDSVITTRLFVPSSRIGCLIGKGGSIISEMRNVTRASIRILSKENLPRVASEDEEMVQITGDLNVASNALYQVTIRLKANLFEMEGALATLPPALPYLPMSVDISEGSRYGNRDSKSRGHGYSTHSDGYGSSDLRDNSGSYGGLQSGGGSGYGAYGIYSSGRSGSAGLSGHNSVPRGKHHGY 534
BLAST of DCAR_031004 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0HEL9 ((RNA-binding KH domain-containing protein {ECO:0000313|EMBL:GFZ21557.1}))
HSP 1 Score: 763.451 bits (1970), Expect = 0.000e+0
Identity = 370/493 (75.05%), Postives = 438/493 (88.84%), Query Frame = 0
Match: A0A7J0HEL9 ((RNA-binding KH domain-containing protein {ECO:0000313|EMBL:GFZ21557.1}))
HSP 1 Score: 763.451 bits (1970), Expect = 0.000e+0
Identity = 370/493 (75.05%), Postives = 438/493 (88.84%), Query Frame = 0
Query: 1 MAGQKNDYGKRSHYQSDYSGNGGSKRRNPTDDRESHAIGPDDTVYRYLCPVRKIGSIIGRGGDIAKQLRQETRAKIRINETVPGCEERVVIIYSSSEETNSFGDSGDLVSPAQDALFKVHDRIVAEDAPADDEFEEPHQVTVRMLVPSDQIGCVIGKGGQVIQTIRSETRAQIRVLSSEQHLPTCASNSDELLQISGEGPVVKKALYQLACRLHDNPSRSQHLLLSSATIQRSEGAYIPSAG-APIMGVGSLMGPYGGYRSDARDWPASVKEFSLRLVCPTENIGAVIGKGGSIIKQIRQESGASIKVDSSAAEGDDCIISVSAKEAFEESSPTIDATMRLQPRCSEKTEKDSGDSVITTRLLVPSSRIGCLLGKGGSIISEMRNATRASIRILSKEDLPKVAHEDDEMVQITGDLDVATNALLQVMMRLRSNTFEMEGALLA--PAVPYLPMPVDMSDSPRYESRDSKSRGRGYSS-SSRYESNDYPPNDAY 489
MAGQ+++YGKRS+ QS+Y+G+G SKRRNP+D+RE H IG +DTVYRYLCPV++IGSIIG+GG+IAKQLR ET++KIRI ETVPGCEERVV IYSSSEETN+ D+G+LVSPA DALF+VH+RIVAE++ D EFEE Q+TVRMLVPSDQIGC+IGKGGQVIQ +R+ETRAQIRV+SSE+ LP CA NSDELLQI+GE VV+KALYQ+ CRLHDNPSR+QHLLLSS++I +S G ++ +G P+MGV SLMGPYGGY+S+ DW SV+EFSLRLVCPTENIG VIGKGGSIIKQIRQESGASIKVDSS AEGDDC IS+SAKE+FE+ SPTIDA MRLQPRCS+K+EK+SGDSVITTRLLVP SRIGCL+GKGG+II+EMRNATRASIRILSKE+LPKVA ED+EMVQITGD++VA+NALLQV MRL++N FEMEGAL A PAVPYLP+ +DMSD P+Y +RD+KSRGRGYS+ S Y+S D PP+D+Y
Sbjct: 1 MAGQRSNYGKRSYSQSEYAGDGESKRRNPSDEREQHTIGSEDTVYRYLCPVKRIGSIIGKGGEIAKQLRAETQSKIRIGETVPGCEERVVTIYSSSEETNNLEDTGELVSPAHDALFRVHERIVAEESLGDGEFEESQQITVRMLVPSDQIGCIIGKGGQVIQNMRTETRAQIRVMSSER-LPPCALNSDELLQITGEASVVRKALYQVLCRLHDNPSRTQHLLLSSSSIYKSGGTFMSQSGNMPLMGVTSLMGPYGGYKSETGDWSGSVREFSLRLVCPTENIGGVIGKGGSIIKQIRQESGASIKVDSSGAEGDDCTISISAKESFEDPSPTIDAAMRLQPRCSQKSEKESGDSVITTRLLVPGSRIGCLIGKGGAIITEMRNATRASIRILSKENLPKVALEDEEMVQITGDINVASNALLQVTMRLKANVFEMEGALAAMPPAVPYLPVSIDMSDGPKYGNRDNKSRGRGYSTYSDGYDSPDLPPSDSY 492
BLAST of DCAR_031004 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: Q60D29 ((KH domain containing protein {ECO:0000313|EMBL:AAU90323.1}))
HSP 1 Score: 745.732 bits (1924), Expect = 0.000e+0
Identity = 378/536 (70.52%), Postives = 444/536 (82.84%), Query Frame = 0
Match: Q60D29 ((KH domain containing protein {ECO:0000313|EMBL:AAU90323.1}))
HSP 1 Score: 745.732 bits (1924), Expect = 0.000e+0
Identity = 378/536 (70.52%), Postives = 444/536 (82.84%), Query Frame = 0
Query: 1 MAGQKNDYGKRSHYQSDYSGNGGSKRRNPTDDRESHAIGPDDTVYRYLCPVRKIGSIIGRGGDIAKQLRQETRAKIRINETVPGCEERVVIIYSSSEETNSFGDSGDLVSPAQDALFKVHDRIVAEDAPADDEFEEPHQVTVRMLVPSDQIGCVIGKGGQVIQTIRSETRAQIRVLSSEQHLPTCASNSDELLQISGEGPVVKKALYQLACRLHDNPSRSQHLLLSSATIQRSEGAYI-PSAGAPIMGVGSLMGPYGGYRSDARDWPASVKEFSLRLVCPTENIGAVIGKGGSIIKQIRQESGASIKVDSSAAEGDDCIISVSAKEAFEESSPTIDATMRLQPRCSEKTEKDSGDSVITTRLLVPSSRIGCLLGKGGSIISEMRNATRASIRILSKEDLPKVAHEDDEMVQITGDLDVATNALLQVMMRLRSNTFEMEGAL--LAPAVPYLPMPVDMSDSPRYESRDSKSRGRGYSS-SSRYESNDYPPNDAYGSYGGSQGGGSGYGAYGVY-SGRSGGSGLYGESPVSYGKHHGY 531
MAGQ+N+YGKR +SDYS + GSKRR PTD++ES++IGP+DTV+RYLCP KIGSIIG GGDIAKQLR ET +KIRI+ET+PGCEERVV IYS SEETN D+GDL+SPAQDALF+VHDR++AED D++ E+ Q+TVRMLVPSDQIGCVIGKGGQVIQ +RSET AQIRVLSSE HLP CA NSDELLQI+GEG VVKKALYQ+A RLHDNPSRSQH LLSS +I RS ++ P AG +MGV SLMGPY Y+SD R +SVKEF++RLVCPTEN+GAVIGKGG IIKQ+RQESGASIKVDS+AAEGDDCII VSAKEAFE+ SPTIDATMRLQPR SEKTEK+SGD+++TTRLLVPSSR+GCL+GKGGSII+EMRN+TRASIR+LSKE+LPKVA EDDEMVQITGD +VATNALLQV+MRLR+NTFEMEG+ +P + Y+PM M D RY +RD++SR GYSS S ++ ND P+D+YG GGG Y YGVY SGR +G+ +P +YGK +GY
Sbjct: 1 MAGQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSE-HLPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQLLSSPSIFRSGAGFVNPHAGTQVMGVTSLMGPYASYKSDGRSKSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQSPTIDATMRLQPRSSEKTEKESGDAILTTRLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVATNALLQVLMRLRANTFEMEGSFPAFSPGLSYVPMSASMPDGSRYGNRDNRSRRHGYSSYSGGHDYNDLSPSDSYGGS--QVGGGGNYAPYGVYSSGRPSSAGVSSHNPSAYGKSYGY 533
BLAST of DCAR_031004 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4BIE5 ((KH domain-containing protein At4g18375-like isoform X1 {ECO:0000313|RefSeq:XP_016488636.1, ECO:0000313|RefSeq:XP_016488667.1}))
HSP 1 Score: 741.11 bits (1912), Expect = 0.000e+0
Identity = 378/536 (70.52%), Postives = 445/536 (83.02%), Query Frame = 0
Match: A0A1S4BIE5 ((KH domain-containing protein At4g18375-like isoform X1 {ECO:0000313|RefSeq:XP_016488636.1, ECO:0000313|RefSeq:XP_016488667.1}))
HSP 1 Score: 741.11 bits (1912), Expect = 0.000e+0
Identity = 378/536 (70.52%), Postives = 445/536 (83.02%), Query Frame = 0
Query: 1 MAGQKNDYGKRSHYQSDYSGNGGSKRRNPTDDRESHAIGPDDTVYRYLCPVRKIGSIIGRGGDIAKQLRQETRAKIRINETVPGCEERVVIIYSSSEETNSFGDSGDLVSPAQDALFKVHDRIVAEDAPADDEFEEPHQVTVRMLVPSDQIGCVIGKGGQVIQTIRSETRAQIRVLSSEQHLPTCASNSDELLQISGEGPVVKKALYQLACRLHDNPSRSQHLLLSSATIQRSEGAYI-PSAGAPIMGVGSLMGPYGGYRSDARDWPASVKEFSLRLVCPTENIGAVIGKGGSIIKQIRQESGASIKVDSSAAEGDDCIISVSAKEAFEESSPTIDATMRLQPRCSEKTEKDSGDSVITTRLLVPSSRIGCLLGKGGSIISEMRNATRASIRILSKEDLPKVAHEDDEMVQITGDLDVATNALLQVMMRLRSNTFEMEG--ALLAPAVPYLPMPVDMSDSPRYESRDSKSRGRGYSS-SSRYESNDYPPNDAYGSYGGSQGGGSGYGAYGVY-SGRSGGSGLYGESPVSYGKHHGY 531
MAGQ+N++GKR +SDY+ N GSKRRNPTD++ES++IGP+DTV+RYLCP KIGSIIG GGDIAKQLR ET +KIRI+ET+PGCEERVV IYS+SEETN + D+GDL+SPAQDAL KVHDR+ AE+ +++ E+P Q+T+RMLVPSDQIGCVIGKGGQVIQ +RSET AQIRVLSSE HLP CA +SDEL+QI+GEG VVKKALYQ+A RL DNPSRSQH LLSS +I RS + P AG +MG+ SLMGPYG Y+SD R ASVKEF++RLVCPTENIGAVIGKGGSIIKQ+RQESGASIKVDS+AAEGDDCII VSAKEA+E+ SPTIDA MRLQPR SEKTEKDSGD+++TTRLLVPSSR+GCL+GKGGSI++EMRN TRASIRILSKE+LPKVA EDDEMVQITGD++VA NALLQV+MRLR+N FEMEG A +P V YLP+ MSD RY +RD+KSR GYSS S ++ ND P+D+YG GGG GY YGVY SGRS +G+ + +YGK +GY
Sbjct: 1 MAGQRNNFGKRMQSESDYTRNDGSKRRNPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSASEETNVYEDTGDLISPAQDALLKVHDRVFAEELRMEEDLEDPQQITIRMLVPSDQIGCVIGKGGQVIQNMRSETGAQIRVLSSE-HLPPCALSSDELIQITGEGAVVKKALYQVAARLRDNPSRSQHQLLSSPSIYRSGAGLVNPHAGPQVMGMTSLMGPYGSYKSDGRSRSASVKEFAVRLVCPTENIGAVIGKGGSIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAYEDQSPTIDAIMRLQPRSSEKTEKDSGDAILTTRLLVPSSRVGCLIGKGGSIVNEMRNTTRASIRILSKENLPKVASEDDEMVQITGDVNVAANALLQVLMRLRANIFEMEGSFAAFSPPVSYLPLSPSMSDGSRYANRDNKSRRHGYSSYSGGHDYNDSSPSDSYGG--SQVGGGGGYAPYGVYSSGRSSSAGVSSHNSSAYGKSYGY 533
BLAST of DCAR_031004 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7VG98 ((KH domain-containing protein At4g18375 {ECO:0000313|RefSeq:XP_009760870.1}))
HSP 1 Score: 739.954 bits (1909), Expect = 0.000e+0
Identity = 378/536 (70.52%), Postives = 445/536 (83.02%), Query Frame = 0
Match: A0A1U7VG98 ((KH domain-containing protein At4g18375 {ECO:0000313|RefSeq:XP_009760870.1}))
HSP 1 Score: 739.954 bits (1909), Expect = 0.000e+0
Identity = 378/536 (70.52%), Postives = 445/536 (83.02%), Query Frame = 0
Query: 1 MAGQKNDYGKRSHYQSDYSGNGGSKRRNPTDDRESHAIGPDDTVYRYLCPVRKIGSIIGRGGDIAKQLRQETRAKIRINETVPGCEERVVIIYSSSEETNSFGDSGDLVSPAQDALFKVHDRIVAEDAPADDEFEEPHQVTVRMLVPSDQIGCVIGKGGQVIQTIRSETRAQIRVLSSEQHLPTCASNSDELLQISGEGPVVKKALYQLACRLHDNPSRSQHLLLSSATIQRSEGAYI-PSAGAPIMGVGSLMGPYGGYRSDARDWPASVKEFSLRLVCPTENIGAVIGKGGSIIKQIRQESGASIKVDSSAAEGDDCIISVSAKEAFEESSPTIDATMRLQPRCSEKTEKDSGDSVITTRLLVPSSRIGCLLGKGGSIISEMRNATRASIRILSKEDLPKVAHEDDEMVQITGDLDVATNALLQVMMRLRSNTFEMEG--ALLAPAVPYLPMPVDMSDSPRYESRDSKSRGRGYSS-SSRYESNDYPPNDAYGSYGGSQGGGSGYGAYGVY-SGRSGGSGLYGESPVSYGKHHGY 531
MAGQ+N++GKR +SDY+ N GSKRRNPTD++ES++IGP+DTV+RYLCP KIGSIIG GGDIAKQLR ET +KIRI+ET+PGCEERVV IYS SEETN + D+GDL+SPAQDAL KVHDR+ AE+ +++ ++P Q+T+RMLVPSDQIGCVIGKGGQVIQ +RSET AQIRVLSSE HLP CA +SDEL+QI+GEG VVKKALYQ+A RL DNPSRSQH LLSS +I RS + P AG +MG+ SLMGPYG Y+SD R ASVKEF++RLVCPTENIGAVIGKGGSIIKQ+RQESGASIKVDS+AAEGDDCII VSAKEA+E+ SPTIDATMRLQPR SEKTEKDSGD+++TTRLLVPSSR+GCL+GKGGSI++EMRN TRASIRILSKE+LPKVA EDDEMVQITGD++VA NALLQV+MRLR+N FEMEG A +P V YLP+ MSD RY +RD+KSR GYSS S ++ ND P+D+YG GGG GY YGVY SGRS +G+ + +YGK +GY
Sbjct: 1 MAGQRNNFGKRMQSESDYTRNDGSKRRNPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSLSEETNVYEDTGDLISPAQDALLKVHDRVFAEELRMEEDLDDPQQITIRMLVPSDQIGCVIGKGGQVIQNMRSETGAQIRVLSSE-HLPPCALSSDELIQITGEGAVVKKALYQVAARLRDNPSRSQHQLLSSPSIYRSGAGLVNPHAGPQVMGMTSLMGPYGSYKSDGRSRSASVKEFAVRLVCPTENIGAVIGKGGSIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAYEDQSPTIDATMRLQPRSSEKTEKDSGDAILTTRLLVPSSRVGCLIGKGGSIVNEMRNTTRASIRILSKENLPKVASEDDEMVQITGDVNVAANALLQVLMRLRANIFEMEGSFAAFSPPVSYLPLSPSMSDGSRYANRDNKSRRHGYSSYSGGHDYNDSSPSDSYGG--SQVGGGGGYAPYGVYSSGRSSSAGVSNHNSSAYGKSYGY 533
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7ARD2 | E-Value: 0.000e+0, PID: 75.23 | (Uncharacterized protein {ECO:0000313|EMBL:MPA5916... [more] |
| A0A5B7AR23 | E-Value: 0.000e+0, PID: 75.42 | (Uncharacterized protein {ECO:0000313|EMBL:MPA5917... [more] |
| A0A5B7AR38 | E-Value: 0.000e+0, PID: 74.58 | (Uncharacterized protein {ECO:0000313|EMBL:MPA5916... [more] |
| A0A103XVS6 | E-Value: 0.000e+0, PID: 73.74 | (K Homology domain-containing protein {ECO:0000313... [more] |
| A0A5B7ATK7 | E-Value: 0.000e+0, PID: 77.64 | (Uncharacterized protein {ECO:0000313|EMBL:MPA5916... [more] |
| A0A5B7AT39 | E-Value: 0.000e+0, PID: 74.77 | (Uncharacterized protein {ECO:0000313|EMBL:MPA5916... [more] |
| A0A7J0HEL9 | E-Value: 0.000e+0, PID: 75.05 | (RNA-binding KH domain-containing protein {ECO:000... [more] |
| Q60D29 | E-Value: 0.000e+0, PID: 70.52 | (KH domain containing protein {ECO:0000313|EMBL:AA... [more] |
| A0A1S4BIE5 | E-Value: 0.000e+0, PID: 70.52 | (KH domain-containing protein At4g18375-like isofo... [more] |
| A0A1U7VG98 | E-Value: 0.000e+0, PID: 70.52 | (KH domain-containing protein At4g18375 {ECO:00003... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |