DCAR_027609

Resource Type: 
Polypeptide
Name: 
DCAR_027609
Identifier: 
DCAR_027609.mRNA-protein
Sequence: 
MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKC
EALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRP
NEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCAR
DPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAA
AFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLV
RESIMASPYSEYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSY
LEGPEKYLSQMNFEDKGAFQSGLPKFTSAKNDDVKILLQCTSPLLWSHNS
AVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKA
MPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYV
RDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSG
GDSIVLIQAIISIRSIIKLDPPRHEKDYVRDSDRRFAADTVAAIGLCAQR
LPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDP
PRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTY
LACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDI
NYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKP
KSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIV
KGGTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSA
SEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALE
SWLDESPDSSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNG
LRVDYVFSSEMSSKSKFVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSE
QALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPI
KLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRC
TFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVT
TNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETV
FGLNLLNKIVSFLAEPPL*
Sequence Length: 
1219
Sequence Checksum: 
eadff44ac4da7cb2f710c8251dffb979
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, DCAR_027609, derives from mRNA, DCAR_027609.
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Blast Results: 
The following BLAST results are available for this feature:
BLAST of DCAR_027609 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_027609 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7H4D6 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})

HSP 1 Score: 1407.89 bits (3643), Expect = 0.000e+0
Identity = 758/1231 (61.58%), Postives = 912/1231 (74.09%), Query Frame = 0
 
Query:    1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASPYSEY-LDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAKND-DVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIAT-ESSIPVIFQE-FQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVKG-------GTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGN-DVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPDSSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSKF-VCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEPPL 1218
            MF QFGATA+SLSKAST+VFRIGTDAHLYDDP+DV+IAPLLDSKFDSEKCEALKRLLALIAQGFDV+N+FPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALR MAGIRLHV+AP+V+VAV KCARDPSVYVRKCAANALPKLHDLRLE+N   IEE+VGILLNDNSP VVG AAAAFASVCPNNL+LIGR+Y +LCETLPDVEEWGQIVLI ILLRYVIAR GLV+ESIM S  +     SE D PD +F +KE  +    G Y+S+L +M S+SYLEGPEKYLS+ +  D+G F   L  FTS+K++ DVKILLQCT PLLWSHNSAV+LAAAG+HWIMAP+ED++RIVKPLLFILRSS+AS YV  C + +      +  A+Y                  + +L NI     ++P +F   F+D+                 +C+     +    LE L ++ I  S+           +V+ Q                 +DY+RD DRRFAADTVAAIGLC +RLP VAN CLEGLLALT  + LN+D  S  G++ VL+QA+ISIR+II LDPP HEKVI+ LVR L+ IKVP ARAM+I M+GEYNS G I+P+ML +VL YLA CFT EA+E KLQIL  A+KV+LCA+G+D+   K++LSYVLELAKCD++YD+RDRAR ++KLL+ ++ S +L +EA+ + E+K++  ++A+ LF  + K +  EP NYRFYLPGSLSQ+V HAAPGY PLP PCSL+  +    SN V+         T+SD  GVD  +  SGS +++S S   S+ S  GSS +   G+E GS SE D+N   LI+FSDV NA   N NG  + N+ QSR +DFGELMS +ALESWLDE P  S+N+ E S  Q SSARIS+G +S RVK KS+TLLD   GNGL VDY FSSE+SS S   VC+EVSFKNCS EP  K+LL DE+   G D++EQAL ++ S    H  D   +VP+EEI  L+ GQS+K+I++V FHHHLLP+KL L C+G K PVKL PDIGYFVKPLPMD E F  KESQL GMFEY R CTF DH+ ELK+EKG+ S++KDKFL +CE+L LKMLSNANL L+SVDMPV  N DD SGL LRF+ EILSNS PCLITVT++G C EPL+ +VKVNCEETVFGLNLLN+IV+FLAEP L
Sbjct:    1 MFPQFGATAESLSKASTMVFRIGTDAHLYDDPEDVNIAPLLDSKFDSEKCEALKRLLALIAQGFDVANFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRAMAGIRLHVIAPLVLVAVGKCARDPSVYVRKCAANALPKLHDLRLEDNITEIEEMVGILLNDNSPGVVGPAAAAFASVCPNNLSLIGRNYIRLCETLPDVEEWGQIVLIGILLRYVIARHGLVKESIMLSSCATVTYHSENDDPDTNFELKENRSNKGSGTYESELAEMVSRSYLEGPEKYLSRSSHADRGFFGLDLSSFTSSKSNSDVKILLQCTLPLLWSHNSAVVLAAAGVHWIMAPREDVKRIVKPLLFILRSSNASKYV-FCTVLL---ENANTLANY------------------VLVLCNIQVFAKAMPCLFSPYFEDFF----------------ICSSDPYQIKALKLEILSSIAIDSSI-----------LVIFQEF---------------QDYIRDPDRRFAADTVAAIGLCGRRLPKVANICLEGLLALTRQELLNSDIGSVDGEAGVLVQALISIRAIINLDPPCHEKVIIQLVRGLELIKVPAARAMIIWMVGEYNSIGDIIPRMLPTVLKYLAWCFTSEAVEAKLQILNTAIKVLLCAKGEDMWTFKRILSYVLELAKCDLSYDVRDRARTLKKLLSCHIGSHDLDKEAKGLPENKHLQTVVADFLFRGQTKPL-PEPINYRFYLPGSLSQMVFHAAPGYEPLPNPCSLSCDELGCSSNDVQRIKALREEATNSDSVGVDGPDTVSGSLNEESTSDYSSQDSITGSSDSAGGGNEIGSVSETDDNADPLIHFSDVSNAC-TNQNGGLQDNNAQSRLDDFGELMSKKALESWLDEHP--SQNSSELSHVQRSSARISIGDISGRVKLKSHTLLDPAIGNGLNVDYTFSSEISSVSPLLVCVEVSFKNCSTEPMSKLLLVDEESSKGLDSAEQALASSGSPLTTHK-DGPTVVPMEEISSLDAGQSTKRILQVRFHHHLLPLKLDLWCNGKKHPVKLRPDIGYFVKPLPMDIELFTSKESQLPGMFEYIRSCTFSDHIGELKNEKGDSSILKDKFLAICESLALKMLSNANLFLVSVDMPVAANLDDASGLRLRFSSEILSNSNPCLITVTVKGKCFEPLSVSVKVNCEETVFGLNLLNRIVNFLAEPGL 1162    
BLAST of DCAR_027609 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A4L041 (AP3B1_C domain-containing protein {ECO:0000259|SMART:SM01355} (Fragment))

HSP 1 Score: 1372.07 bits (3550), Expect = 0.000e+0
Identity = 760/1286 (59.10%), Postives = 907/1286 (70.53%), Query Frame = 0
 
Query:    1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASP-YSEYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAK-NDDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYV----------------------------------ALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVK------------------------VVLCARG-DDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSN------IVKGGTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVG-NAAYA-NLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPDSSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEP 1216
            MF QFGATA++LSKAS++VFRIGTDAHLYDDP+DVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSN+FPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSIN FQKDLGDPNPLVRAWALR MAGIRLHV+AP+V+VAV KCARDPSVYVRKCAANALPKLHDLR+EENT  IEEIVGILLNDNSP VVGAAAAAFASVCPNNL+LIGR+Y+KLCETLPDVE+WGQ+VLI ILLRYVIAR GLV+ESIM S   +E   SE  G D DF + E  +    G Y+S+L ++ S+SYLEGPEKYL++ +   +G+ +      TSAK NDDV ILL+CTSPLLWSHNSAV+L AAG+HWIM+P++D++RIVKPLLF+LRSS AS YV                                   LCNIQVFAKAMP +FA Y EDFFICSSD YQIKALKLEILS+IAT+SSI VI +EFQDY+RD DRRFAADT+A IGLCA+RLPNVAN CLEGLL+LT  + L +D  S+ G++ + +QA+ISI+SII LDP  HEK                                   L+ L  P SL  +  S    + V+IQ                      LVR+L+ IKVP ARA+++ M+GEYNS G I+PKML +VL YL  CFT E+LE KLQIL  AVK                        V+LC+ G +D+   K++LSY+LELAKCD+NYD+RDRAR ++KLL+ +  S +L +E + +SE+KN    + + LF       S+EP N+ FYLPGSLSQIVLHAAPGY PLP P SL   +   G N       V+G T+SD YGVD S+  S S D +S S      S+   SG+  G E GSASE D++   LI  SDV  N  +    NG S +       ++F EL+S + LESWLDE P S     E    + SSARIS+G +  RVK KS+ LLD   G+GL VDY FSSE+S+ S   VC+EVSF NCS+E   K+LL DE+   G D++E AL T+ES   P + DV  +VP E+I  L+ GQ++K+I++V FHHHLLP+KLVL C+G K PVKL PDIGYFVKPLPMD + F  KESQL GMFEY R CTF DH+ ELK++KG+ SLVKDKFLV+CE+L LKMLSNANL L+SVDMPV +  DD SGLCLRF+ EILSNS+PCLITV++ G CSEPL  +VKVNCEETVFGLNLLN+ V+ LAEP
Sbjct:    1 MFTQFGATAETLSKASSMVFRIGTDAHLYDDPEDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLGDPNPLVRAWALRAMAGIRLHVIAPLVLVAVTKCARDPSVYVRKCAANALPKLHDLRMEENTTTIEEIVGILLNDNSPGVVGAAAAAFASVCPNNLSLIGRNYRKLCETLPDVEDWGQVVLIGILLRYVIARHGLVKESIMMSSCATENSHSENGGSDADFRLNETIDNKGFGVYESELAEIVSRSYLEGPEKYLARSSHAYRGSSERDFSCSTSAKSNDDVNILLRCTSPLLWSHNSAVVLGAAGVHWIMSPRDDVKRIVKPLLFVLRSSYASKYVDSPENYDGIARNPLXFLLLENIKISKEANLRRHEVLCNIQVFAKAMPRIFAPYFEDFFICSSDPYQIKALKLEILSSIATDSSISVILREFQDYIRDPDRRFAADTIATIGLCARRLPNVANMCLEGLLSLTSHEYLISDMGSADGEAGIXVQALISIKSIINLDPLCHEK-------------------------------VNHDLMELLFP-SLMENLASWSCKTYVIIQ----------------------LVRSLELIKVPAARALIVWMVGEYNSIGEIIPKMLPTVLKYLXWCFTTESLEAKLQILNTAVKVAXFYRLSIHLSVIPRFTYLSFSQVLLCSEGEEDMGIFKRILSYLLELAKCDLNYDLRDRARALKKLLSSHTASHDLEDEGKSLSENKNTQSAV-QGLFFGLQTKPSSEPINFHFYLPGSLSQIVLHAAPGYEPLPNPSSLICDELGHGPNDVQGIKAVRGPTNSDSYGVDGSDSVSESVDGESTS---DYSSQCSISGSGGGGEGGSASEIDDDADPLIQISDVSVNPDWVPQKNGESGL-------DNFDELISXKTLESWLDEHPSS-----ELIHVRRSSARISIGDIGSRVKLKSHKLLDPAIGSGLSVDYTFSSEISTVSPLLVCVEVSFTNCSSESMSKLLLLDEESSKGLDSTEHALETSESEXTP-SKDVPTLVPXEDISSLDAGQTTKRILQVRFHHHLLPLKLVLWCNGKKYPVKLRPDIGYFVKPLPMDIQLFTSKESQLPGMFEYIRSCTFTDHIMELKNDKGDSSLVKDKFLVICESLALKMLSNANLFLVSVDMPVASTLDDASGLCLRFSGEILSNSLPCLITVSVXGKCSEPLTVSVKVNCEETVFGLNLLNRTVNLLAEP 1215    
BLAST of DCAR_027609 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BEB8 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})

HSP 1 Score: 1350.11 bits (3493), Expect = 0.000e+0
Identity = 750/1229 (61.03%), Postives = 891/1229 (72.50%), Query Frame = 0
 
Query:    1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIM-ASPYSEYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAK-NDDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVK-------GGTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPD-SSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEPPL 1218
            MF QFGATA++LSKAST++FRIGTDAHLYDDP+DV+I PLLDSKFD+EKCEALKRLLALIAQGFDVSN+FPQVVKNVASQS+EVKKLVYLYLLHYAEKRPNEALLSIN FQKDLGDPNPLVRAWALR MAGIRLHV+AP+V+VAV KCARDPSVYVRK AANALPKLHDLRLEENT  IEEIVGILLNDNSP+VVGAAAAAFASVCPNNL+LIGR+Y++LCETLPDVEEWGQIVLIEILLRYVIAR GLVRESIM  S  +E    E DGP+ +FA+KE  + +  G Y+S+L  M S+SYLEGP+KYLS+ N+ D G+        TSAK NDDVKILLQCTSPLLWSHN AV+LAAAG+HWIMAP+ D++RIVKPLLF+LRSS+AS YV LCNIQVFAKA+PSLFA Y EDFFICSSD+YQIKALKLEILS+IA +SSI  IFQEFQDY+ D DRRFAADTVAAIGLCA+RLPNVANTCLEGLLALT  +SLN D  S  G++ VLIQAIISI +IIKLDPP +EK  ++                            +  L ++ +P +             ++I  +    SI  + P     V+ +L    +S  V T   ++       N++  +L             C   E L+T  +IL   +++  C    D+    ++L    +L  C                   Y+ S  L EEA+Y  E+K++SC+LAE +F  + K  S E  NYRFYLPGSLSQIVLHAAPGY PLP+PCSL   D    SN+V+       G T+S+ YG+DD +  SGS + +S S   S  S  GSS +   + SGSASEG+ + G LIN SDV N AY N NG SE N   S  +D GE+MS RALESWLDE+P  SS+++ E S  Q SSARIS+G +  RVKPKSY LLD  NGNGL VDY+FSS++SS S   VC+EVSFKNCS EP   ++L DE+   G D+++Q L T +S    H NDV  +VP+EEI  LE GQ++K+I++V FHHHLLP+KLVL C   K PVKL PDIGYFVKPL MD E F  KESQL GMFEY RRC FIDH+ +L ++KGE + VKDKFLV+CETL LKMLSNAN+ L+SVDMP+  N DD SGL LRF+CEILSNS+PCLITV++ G CSEPLN +VKVNCEETVFGLNLLN++V+FL EP L
Sbjct:   45 MFPQFGATAETLSKASTMMFRIGTDAHLYDDPEDVNIVPLLDSKFDTEKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSVEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLGDPNPLVRAWALRAMAGIRLHVIAPLVLVAVGKCARDPSVYVRKSAANALPKLHDLRLEENTTTIEEIVGILLNDNSPAVVGAAAAAFASVCPNNLSLIGRNYRRLCETLPDVEEWGQIVLIEILLRYVIARHGLVRESIMIPSCSTESYHYEKDGPETNFALKENIDDMGGGIYESELADMVSRSYLEGPDKYLSRSNYTDGGSSGLDCSSCTSAKGNDDVKILLQCTSPLLWSHNGAVVLAAAGIHWIMAPRRDVKRIVKPLLFVLRSSNASKYVVLCNIQVFAKALPSLFAPYYEDFFICSSDSYQIKALKLEILSSIAIDSSISFIFQEFQDYISDPDRRFAADTVAAIGLCAKRLPNVANTCLEGLLALTRQESLNIDVGSVDGEAGVLIQAIISIMAIIKLDPPGNEKVIIQ---------------------------LVRSLDSIKVPAA-----------RAMIIWMVGEYNSIGHIIPRMLTTVLEYLTWCFNSEAVETKLQIL-------NTAAKVL------------LCAEGEDLQTFKRILSYVLELAKCDSNYDVRDRARILK---KLTPC-------------------YMGSHGLEEEAKYQPENKDLSCVLAESIFRGQTKPTSLEHMNYRFYLPGSLSQIVLHAAPGYEPLPKPCSLIFDDLGHCSNVVQGIKSSQEGTTNSESYGIDDPDSVSGSLNGESTSGYSSRDSITGSSDSGGNNGSGSASEGEYSAGPLINLSDVSN-AYKNQNGGSEENKTHSGSDDLGEVMSKRALESWLDENPGMSSQDSSEQSHLQRSSARISIGDIGRRVKPKSYALLDPTNGNGLSVDYIFSSKISSISPLLVCVEVSFKNCSTEPMSTLILLDEESNRGLDSADQVLATTKSPLTSH-NDVPTLVPMEEITSLEAGQTTKRILQVRFHHHLLPLKLVLWCDEKKHPVKLRPDIGYFVKPLLMDIEMFTNKESQLPGMFEYIRRCAFIDHIGDLNNDKGESAQVKDKFLVICETLALKMLSNANIFLVSVDMPIAANLDDASGLRLRFSCEILSNSIPCLITVSVEGKCSEPLNLSVKVNCEETVFGLNLLNRVVNFLGEPSL 1192    
BLAST of DCAR_027609 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834Z0N7 ((Uncharacterized protein {ECO:0000313|EMBL:KAF8397480.1}))

HSP 1 Score: 1327.77 bits (3435), Expect = 0.000e+0
Identity = 713/1227 (58.11%), Postives = 877/1227 (71.48%), Query Frame = 0
 
Query:    1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIM-ASPYSEYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAKN-DDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIAT-ESSIPVIFQ-EFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVK-------GGTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPDSSRNAPESSSF-QNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDY-VFSSEMSSKSKFVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLA 1214
            MF QFGAT+++LSKAS+++FRIGTDAHLYDDP+DV+IAP LDS+FDSEKCEALKRLLALIAQGFDVSN+FPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDL D NPLVRAWALR MAGIRLHV++P+V+VAV KCARDPSVYVRKCAANALPKL+DL  EEN   +EEIVGILL+DN+P VVGAAA+AF+SVCPNNL+LIGR+YK+LCETLPDVEEWGQIVLI ILLRY++AR GLV+ESIM  S  ++  +SE D  D   A  ++T     G Y+S+L  + SK Y+EGP++YLS+ ++ ++  F      FTS K+ DDVKILLQCTSPLLWSHNSAV+LAAAG+HWIMAP+ED++RIVKPLLF++RSS AS YV   + + F + +PSL                      L++L NI     ++P +F   F+D+                 +C+     +    LE L  +    S+ N           + Q                 +DY+ D DRRF ADTVAAIGLCAQRLP V+NTCLEGLLALT  + L +D  S  G+  VL QAI+SI++IIK DP  HEKVI+ LVR LDSIKVP ARAM+I ++GEY+S G I+P+ML +V+ YLA CFT EALETK QIL    KVVL A+G+DL   K++LSYVLELAKCD+NYD+RDRARV++KLL+ ++      E  + + +  ++S LLAE +F  K    S E NNYRFYLPGSLSQIVLHAAPGY PLP+PCSL   D    S++V+       G T  + +G++D +  SGS +++S SS       +  S    GD  GS SE D+N   LI FSDVGN  Y   NG S  N+  S P+D G L+S RALESWLDE P  S  +    S  Q SSARI +  +  R+KPK+Y+LLD  NGNGLRVDY   S   S  S  +C+E+SF+N S+EP  KI L DE+     D++ QAL T ESSSA H  DV  +V +EEI  LEPG+++ +I+EV FHHHLLP+KL + C+G + PVKL PDIGYF+KPLP+D E F +KESQL GMFEY RRCTF DH+ EL  EKG+ SL+KDKFLVVC++L  KMLSNANL L+SVDMPVT N DD +GLCLRF+ EILSNS+PCLIT+T+ G CSEPLN +VKVNCEET+FGLNLLN++V+FL+
Sbjct:    1 MFPQFGATSETLSKASSMMFRIGTDAHLYDDPEDVNIAPFLDSRFDSEKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLSDSNPLVRAWALRAMAGIRLHVISPLVLVAVGKCARDPSVYVRKCAANALPKLYDLHQEENVSALEEIVGILLSDNAPGVVGAAASAFSSVCPNNLSLIGRNYKRLCETLPDVEEWGQIVLIGILLRYIVARHGLVKESIMFPSHCTQSSNSEKDVSDIYVASGKDTADTVGGTYESELTNLVSKCYIEGPDEYLSRSSYMNRNTFVLDCASFTSEKDSDDVKILLQCTSPLLWSHNSAVVLAAAGIHWIMAPREDVKRIVKPLLFVMRSSHASKYVFTVD-ERFTRHVPSL----------------------LQVLCNIQVFAKAMPFLFAPHFEDFF----------------ICSSDSYQIKALKLEILSTIATDSSILN-----------IFQEF---------------QDYITDPDRRFVADTVAAIGLCAQRLPTVSNTCLEGLLALTRKEYLTSDLGSMDGEVGVLTQAIMSIKAIIKQDPVGHEKVIIQLVRLLDSIKVPAARAMIIWVVGEYSSIGQIIPRMLATVIKYLAWCFTSEALETKHQILSTTSKVVLKAQGEDLWTFKRILSYVLELAKCDLNYDVRDRARVLKKLLSCHISQGLEEEGTQSLPQDSDLSHLLAEHIFGGKAIPPSPESNNYRFYLPGSLSQIVLHAAPGYEPLPKPCSLLYDDLGQCSDMVRGIKMPGEGSTDGESFGMNDPDTLSGSLNEESASS-----YSSRHSVTSSGDSEGSGSEVDDNANPLIQFSDVGN-PYDKPNGGSGENNAMSFPDDLGGLISKRALESWLDEQPRLSELSSSKQSLEQKSSARIFIRDIGGRIKPKTYSLLDPANGNGLRVDYSFSSEVSSISSLLLCVEISFENSSSEPLTKITLTDEESNRSPDSTNQALETYESSSASH--DVPTVVSMEEIESLEPGETTTRILEVRFHHHLLPLKLAIWCNGKRHPVKLRPDIGYFIKPLPLDVEAFTKKESQLPGMFEYTRRCTFTDHIEELNSEKGQSSLIKDKFLVVCQSLASKMLSNANLFLVSVDMPVTANFDDATGLCLRFSSEILSNSIPCLITITVEGKCSEPLNVSVKVNCEETIFGLNLLNRVVAFLS 1154    
BLAST of DCAR_027609 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5A7PQ66 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})

HSP 1 Score: 1279.23 bits (3309), Expect = 0.000e+0
Identity = 709/1220 (58.11%), Postives = 878/1220 (71.97%), Query Frame = 0
 
Query:    1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASPYSEYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAKNDDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVKGGTH---SDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPDSSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKS-KFVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEP 1216
            M  QFGATA+SLSKAST+VFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQG DVS+YFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSIN FQKDLGDPNPLVRAWALRTMAGIRLHV+A +V+VAV KCARDPSVYVRKCAA ALPKLHDLRLEE+T  IEEIVG+LL DNSP VVGAAAAAF+S+CPNN +LIGR+YK+LCETLPDVEEWGQIVLI ILLRY IA+ GLVRES+M S  +  +D+  +  + +  ++   +   I     +++ + S+SYLEGP+KYLSQM    + +         SA NDDVKILLQCT PLLWS NSAV+LAAAG+HWIMAPKEDL++IVKPLLF+LRSSS+S YV LCNIQVFAKA+PSLF+   EDFFI SSD+Y++K+LKLEILS+IAT SS+  IF EFQ  +                L  Q  P +     + LL +T+   +N +                           R EKDY+RD DR+FAADTVAAIGLCAQRLP+V+ TC+EGLL L + + LN D  S G + IVL+Q I  + +IIK DPP HEKVIVHLVR+LDS+  P ARAM++ MMGEY + G ++ KM+ +VL YLA  F+ EA++TKLQI+ + VK++L A  +D+   +  + YVLELA CD  YD+RDRA V++ LL+      +   E    +E K+++ +LA+ +F  + K + +EP +YRFYLPGSLSQ+VLHAAPGY PLPEPCS ++ D +  S     G     SD   + DSE  SGS D+++ S    + S +GSS  D   +  S S+  E  G LI+ SD   A+  N  G  E N   S   D GELM  R+ ESWL+ESP S +N         S ARIS+  +   VKPKSYTL+D  NGNGL VDY FS+E+SS S + VCL+VSF+NCS EP   ILL +E+     D+S++++ ++ES S  H   V  +VP++EI  L PGQ+  + ++VHF HHLLP+KLVL C+G K  VKL PDIGYF+KP+PM+ E F +KESQLRGMFEY R CTF DH+ +L + K + S  KD FL++CE L LKMLSNAN  L+S+++PV+ N +DVSGLCLRF+ EILSNS+PCL+T+TL+G C++PL  +VK+NCEETVFGLNLLN+IV FLAEP
Sbjct:   11 MLTQFGATAESLSKASTMVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGLDVSSYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLGDPNPLVRAWALRTMAGIRLHVIAQLVLVAVGKCARDPSVYVRKCAATALPKLHDLRLEEHTAAIEEIVGMLLKDNSPGVVGAAAAAFSSICPNNFSLIGRNYKRLCETLPDVEEWGQIVLIGILLRYAIAKHGLVRESLMMSSNTLRMDNSKEESEPNITMRNSIDGTDI-EICPEIIDVVSRSYLEGPDKYLSQMGHVTRESVGLNGSFVASANNDDVKILLQCTLPLLWSSNSAVVLAAAGVHWIMAPKEDLKKIVKPLLFLLRSSSSSKYVVLCNIQVFAKAVPSLFSPCFEDFFISSSDSYRMKSLKLEILSSIATSSSMSSIFLEFQWQL----------------LRMQSSPII----FDYLLEITMKNKMNAEE--------------------------REEKDYIRDPDRKFAADTVAAIGLCAQRLPDVSKTCMEGLLFLALSEPLNKDAASFGEEEIVLVQVIRCLMAIIKQDPPSHEKVIVHLVRSLDSMCAPAARAMIVWMMGEYCNIGSLMSKMIPTVLKYLAQRFSLEAVDTKLQIINSCVKILLHANVEDISDLRITVRYVLELANCDSKYDVRDRAHVLKNLLSHCAGLHD--SEVNDTTEFKDLTYVLAQYIFGGQIK-VPSEPFSYRFYLPGSLSQVVLHAAPGYEPLPEPCS-SVDDGNGHSPSRTEGRRTFDSDPSNISDSESVSGSLDEENTSDYSPQGSASGSSNGDSSYDRASDSDEIEEDGALIHLSDGAPASSNNNEGLVENN--SSSLMDLGELMPKRSFESWLNESPGSRQNPSAVDQVDISLARISIKDIGHLVKPKSYTLVDPSNGNGLSVDYTFSTEVSSSSPQLVCLQVSFRNCSAEPMSNILLSEEEPNQASDSSDKSVVSSESISVSHAA-VPALVPMDEIGSLGPGQTMNRKLQVHFEHHLLPLKLVLWCNGRKQAVKLRPDIGYFIKPIPMNIEIFTKKESQLRGMFEYTRSCTFTDHISQL-NVKEDSSRTKDNFLIICEKLALKMLSNANFFLVSMELPVSANLNDVSGLCLRFSAEILSNSIPCLVTLTLKGTCNQPLEVSVKMNCEETVFGLNLLNRIVVFLAEP 1175    
BLAST of DCAR_027609 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: B9T4I4 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})

HSP 1 Score: 1263.06 bits (3267), Expect = 0.000e+0
Identity = 707/1220 (57.95%), Postives = 860/1220 (70.49%), Query Frame = 0
 
Query:    1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASPYS-EYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAK-NDDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIAT-ESSIPVIFQE-FQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVKGGTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPD-SSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLA 1214
            MF QFGAT ++LSKAST++FRIGTDAHLYDDP+DV+IAPLLDSKFDSEKCEALKRLLALIAQGFDVSN+FPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSIN FQKDLGD NPLVRAWALRTMAGIRLHV+AP+V+VA+ KCARDPSVYVRKCAANALPKLHDL ++E++  I+EIVG+LL+D+SP VVGAAAAAF SVCPNN +LIGR+Y++LCE LPDVEEWGQIVLI ILLRY IAR GLV+ES+M   +S E   SE DG D +F++++E + VS   Y S+L  M S+SY+EGP++YL++ ++ D  + +    KFTS K NDDVKILLQCTSPLLWS+NSAV+LAAAG+HWIMAP ED++RIVKPLL                                  F + SS T      K  +L NI     +IP +F   F+D+  +S   +    +    LC          C+               TESS             I SI K       +DY+RDSDRRFAADTVAAIGLCAQRLP +ANTCLEGLLALT  + L     S+ G++ VL+QAI SI+ IIK  PP HEKV++ LVR+LDSIKVP ARA++I MMGEYN  G I+P+MLT+VL YLA  F+ EALETKLQIL   VKV+  A+ +DLC  KKL SYVLELA+ D+NY++RDRAR+++KLL+  L S E+ +      + +++S +LAE  F  K K  S+EP NYR YLPGSLSQIVLH APGY PLP PCS+   + S  SN +     S   G D S   SGSSD ++     SE     SSG+D GDE+GS S    +   LI  SDVG       +G+      Q   +D GELMS R+LESWLDE PD S+    E S    SSARIS+  +  RVKP SY LLD  NGNGL+VDY FSSE+SS S   VC+EVSF+NCS E   +++L DE+     D++E +L +        +NDV ++VP+EE+  LEPGQ +K+I+ V FHHHLLP+KLVL C+G KLPVKL PDIGYFVKPLPM+ E F  KES+L GMFEY R CTF  H+ EL  +KG++ L++DKFL+VCE+L +KMLSNANL L+SVDMP+  N DD SGLCLRF+ EILSNS+PCLIT+T  G C+EPLN  +KVNCEETVFGLNLLN+IV+FL+
Sbjct:    1 MFPQFGATGETLSKASTIMFRIGTDAHLYDDPEDVNIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINSFQKDLGDTNPLVRAWALRTMAGIRLHVIAPLVLVALGKCARDPSVYVRKCAANALPKLHDLHIDEHSTTIQEIVGVLLSDHSPGVVGAAAAAFTSVCPNNYSLIGRNYRRLCEVLPDVEEWGQIVLIGILLRYAIARHGLVKESLMFFLHSKESSQSEKDGSDVEFSLEKENSSVS-WKYDSELASMVSRSYIEGPDEYLARTSYADSVSSEFNGAKFTSVKSNDDVKILLQCTSPLLWSNNSAVVLAAAGVHWIMAPFEDVKRIVKPLL----------------------------------FLLRSSTTS-----KYVVLCNIQVFAKAIPSLFAPYFEDFFINSSDSYQIKALKLEILC----------CIT--------------TESS-------------ISSIFK-----EFQDYIRDSDRRFAADTVAAIGLCAQRLPKMANTCLEGLLALTRQEYLAGVFGSTDGEAGVLVQAITSIKLIIKQGPPTHEKVVIQLVRSLDSIKVPAARAIIIWMMGEYNDLGEIIPRMLTTVLKYLAWSFSSEALETKLQILNTIVKVLSGAKEEDLCTLKKLGSYVLELAEFDLNYNVRDRARLLKKLLSSKLGSQEIEDNTNSPHQVEDLSHVLAECFFRGKTKHSSSEPINYRIYLPGSLSQIVLHGAPGYEPLPNPCSILHDELSHLSNSMLETDMSG-EGTDSSGTISGSSDQETALGYSSEHCNTESSGDDAGDETGSVSGSGNDADPLIQVSDVG-------DGHINQTGVQPASSDLGELMSKRSLESWLDEQPDLSNPGTSERSQVYRSSARISIRDIGSRVKPNSYGLLDPANGNGLKVDYSFSSEISSISHLLVCVEVSFENCSTETISEVMLVDEESNKAPDSTESSLTS--------HNDVPILVPMEEMISLEPGQVTKRILHVRFHHHLLPLKLVLYCNGKKLPVKLRPDIGYFVKPLPMNIEAFTDKESRLPGMFEYMRSCTFNYHIEELNKDKGDM-LMRDKFLLVCESLAVKMLSNANLFLVSVDMPIAVNLDDASGLCLRFSSEILSNSIPCLITLTAEGKCTEPLNVCIKVNCEETVFGLNLLNRIVNFLS 1121    
BLAST of DCAR_027609 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3Q7GUI1 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})

HSP 1 Score: 1254.97 bits (3246), Expect = 0.000e+0
Identity = 714/1247 (57.26%), Postives = 871/1247 (69.85%), Query Frame = 0
 
Query:    1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASPYS-EYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAK-NDDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVKG-------GTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPDSSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNES---------------------SSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEP 1216
            MF QFGATADSLSKAS+L+FRIGTDAHLYDDPDDV+IAPLLDSKFDSEKCEALKRLLALIAQG ++SN+FPQVVKNVASQS+EVKKLVYLYLLHYAEKRPNEALLSIN FQKDLGDPNPLVRAWALRTMAGIRLHV+AP+V+VAV +CARDPSVYVRKCAANALPKLHDLRLEEN   IEE+VGILLNDN+P VVGAAAAAFAS+CPNN +LI ++Y++LCETLPDVEEWGQIVLI IL+RY IAR GLV+ES+M + +S E  DSE +G +  F +KE TN +     +S++ +M S+SYLEGP+KYLS+   E   +F S L  FTSAK NDDVKILLQCT PLLWS NSAV+LAAAG+HWIMAPKE+L+RIVKPLLF+LRSS AS YV LCNIQVFAKAMP+LF S+ EDFF+ S+D Y +KALKL+ILS IAT+SSI  IF EFQDY++D DRRFAAD VAAIGLCAQRLPN+A+ CLEGLL LT  +  + D  S   ++I+LIQAI SI++IIK +   H+K  V  + +           L + R+P+                              ++I  +    S+  + P     V+ +L  T  S  + T     ++++         +P+     + +    F KE L       Y A  V+L A G+ L   K LL+YVLELAKCD NYDIRDR R+++KLL+ Y  + EL E     S   +   +L   LF  + K + +EP  YRFYLPGSLSQ+VLHAAPGY PLP+P SL   D++  SN+V G        T S+ Y  DD+   SGS +++S S   S+ S+ GSSG      SGS S+ DE+ G LI+ SD GN A+ N  G     +  S  ND GELMS ++LESWLD++P S+ N  E ++   S ARIS+G +S RVKPKSYTLLD  NGNGL V+Y+FSSEMSS S   VC++V+F N S E    + L +E      ++S+Q L ++E                       S    NDV  +VP+EEI  LE GQ  ++I++V FHHHLLP+KL+L C+G K PVKL PDIGYFVKPLPM+   F  KESQL GMFEY RRCTFIDH+ EL   K E  L KD FLV+CETL LK+LSN+NL L+SVDMPV TN DD SG+ LRF+ EILSNS+PCLIT+TL G CSEPL+T VKVNCEETVFGLN LN++V++L EP
Sbjct:    1 MFTQFGATADSLSKASSLMFRIGTDAHLYDDPDDVNIAPLLDSKFDSEKCEALKRLLALIAQGCNISNFFPQVVKNVASQSMEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLGDPNPLVRAWALRTMAGIRLHVIAPLVLVAVGRCARDPSVYVRKCAANALPKLHDLRLEENISTIEELVGILLNDNAPGVVGAAAAAFASICPNNFSLIAKNYRRLCETLPDVEEWGQIVLIGILIRYSIARHGLVKESLMVASHSPENSDSEKEGSETYFGIKERTNDIGRVVCESEIAEMVSRSYLEGPDKYLSRPCSERAFSF-SDLSDFTSAKSNDDVKILLQCTLPLLWSQNSAVVLAAAGVHWIMAPKEELKRIVKPLLFLLRSSDASKYVVLCNIQVFAKAMPTLFVSHFEDFFVSSTDPYPVKALKLDILSLIATDSSISPIFNEFQDYIKDPDRRFAADAVAAIGLCAQRLPNIASICLEGLLVLTSSEISDVDIASMDEEAIILIQAINSIKTIIKHEHSSHDKVIVHLASK-----------LDSIRVPSA---------------------------RAMIIWMLGEYNSMGHIIPKVLPTVLKYLAWTFSSEALETK----LQILNALVKICQRVPQKYKDKMLHTRVFFEKEMLSK-----YVADLVLLHAEGEALSTFKTLLNYVLELAKCDSNYDIRDRGRLLQKLLSHYKGTHELEE-----STPDSTLPVLVGHLFGRETKPVPSEPLAYRFYLPGSLSQMVLHAAPGYEPLPQPLSLICNDTTHESNMVIGMKQPRNRATQSESYETDDANSVSGSLNEESTSGYNSQDSKTGSSGTHGSHRSGSVSDDDEHAGPLIHLSDNGN-AHGNQLGPRFYQNFDS--NDLGELMSIKSLESWLDDNPGSTHNPVELNNVCQSLARISIGDISSRVKPKSYTLLDPANGNGLSVEYIFSSEMSSISPLLVCIQVTFTNNSVEAMSNLQLIEEVSSMRVESSDQVLTSDERLLLCFAIFNIYFVGQNNTEFLCSKMSVNDVPTLVPMEEIAKLERGQVMQRILQVRFHHHLLPLKLLLWCNGKKYPVKLRPDIGYFVKPLPMEINMFSIKESQLPGMFEYIRRCTFIDHIEELN--KLESPLAKDNFLVICETLALKVLSNSNLFLLSVDMPVGTNLDDASGVRLRFSGEILSNSIPCLITITLEGRCSEPLDTKVKVNCEETVFGLNFLNRVVNYLTEP 1189    
BLAST of DCAR_027609 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4D8ZJH8 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})

HSP 1 Score: 1244.57 bits (3219), Expect = 0.000e+0
Identity = 686/1234 (55.59%), Postives = 854/1234 (69.21%), Query Frame = 0
 
Query:    1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASPYSEYLDSEIDGPDRD------FAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSA-KNDDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLL-ALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSG-----HILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVKGGTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGND-VGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPDSSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVREL--KDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEPP 1217
            M  QFGATA+SLSKAST++FRIGTDAHLYDDPDDVSIAPLLDSKF+SEKCEALKRLLALIAQGFD+SNYFPQVVKNVA+QSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLH +A +V+VAV KCARDPSVYVRKCAA ALPKLHDLRLEE+T  IEEIVG+LL DNSP VVGAAA+AFAS+CPNN +LIGR+YK+LCE LPDVEEWGQIVLI ILLRY IA+ GLVRES+M S    + D EI   ++D        V++  +  S+    +++  + ++SYLEGP+KYL+++   ++ +        TSA  NDDVKILLQCTSPLLWS+NSAV+LAAAG+HWIMAPKED+R+IVKPL+F+LRSS +S YV LCNIQVFAKAMPSLF+ Y EDFFI SSD+Y+ K LKLEILS IAT++SI  IF EFQD+VRD DRRFAADTVAAIGLCAQ+LP+V+NTCLE LL L + +S NN     G + I+L+Q + SI +IIK DP  HE+  V       + D+++A    A  +  +   C  G+L +  IP            +S+     I++                V L+        P A +++  M  EY   G      I P M+     ++  CF                +V+L A+ +D+   +  +SYVLELAK D+NYD+RDRARV++  L+ +   F  +EEA Y +E  +++ + AE +F    K + +E  +YRFYLPGSLSQIVLHAAPGY PLPEPCS    ++      V     S+   +DDS+  SGS D++ N+SD S  S +G  G+  +  +SG     DE  G LI+ SD  +A  +  +    V +  S   D GELMS RALESWL+E+ DS +N+   S  Q S ARIS+  + + VKPKSYTLLD  NGNGL V Y FSSE+S  SK   C+ VSF N S EP   I L +E      D+SE++   +ES    H+ +  +I P+EEI  L PGQ + ++++V F HHLLP+KLVL C G K  VKL PDIGYF+KPLPMD E F +KESQL GMFE  RRCTF +H+ +   KDE  +    KD FL++CE L LKMLSNANL L+SVDMPV  N DD+SG+ LR + EIL+NS+PCL+T+TL+G C+EPL  +VK+NCEETVFGLNLLN+IV+FLAEPP
Sbjct:    1 MLTQFGATAESLSKASTMMFRIGTDAHLYDDPDDVSIAPLLDSKFESEKCEALKRLLALIAQGFDISNYFPQVVKNVATQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHAIASLVLVAVGKCARDPSVYVRKCAAIALPKLHDLRLEEHTAAIEEIVGMLLKDNSPGVVGAAASAFASICPNNFSLIGRNYKRLCEILPDVEEWGQIVLIGILLRYAIAKHGLVRESLMLS----FEDLEIQSQEKDDPESSHLTVRKPFDGASLDIC-TEIADIVARSYLEGPDKYLARLGHVNQDSLGFDGSCITSATSNDDVKILLQCTSPLLWSYNSAVVLAAAGVHWIMAPKEDIRKIVKPLIFLLRSSGSSKYVVLCNIQVFAKAMPSLFSPYYEDFFISSSDSYRTKTLKLEILSTIATKTSISSIFLEFQDHVRDPDRRFAADTVAAIGLCAQKLPDVSNTCLEALLYLALSESSNNAVALMGEEEILLVQVVKSIMAIIKQDPHSHERVIVH---LVRSLDSMSAPAARAMVIWMLGEYCNIGVLTSKMIPTIFKYLAHRFHSESVETKLQIVN--------------ACVKLIGEFRLWVEPQAYSVLDLMDDEYLIHGWFWIYRINPHMVNPQSVFI--CF----------------QVLLRAKVEDISELRLAISYVLELAKYDLNYDVRDRARVLKNFLS-HCKGFNYLEEADYRTEFNDLTYVFAEYIF-GGTKKVPSESFSYRFYLPGSLSQIVLHAAPGYEPLPEPCSFADDETGHSPTNVHNDHESN--EIDDSDDISGSLDEE-NTSDYSSESVSGEGGDSYIASDSGE----DEEAGTLIHLSD--DAPDSGDHDRVSVKNTSSGLMDAGELMSKRALESWLNENSDSGQNSSNLSQVQRSLARISIKDIGQLVKPKSYTLLDPTNGNGLSVIYRFSSEVSKVSKELACIHVSFSNHSEEPMCNIFLAEEKPNPSPDSSEKSGSPSESVLVSHDKEATLI-PMEEIDRLNPGQPADRVLQVRFEHHLLPLKLVLSCDGRKQQVKLRPDIGYFIKPLPMDIESFLKKESQLPGMFENIRRCTFSEHLNQQNDKDEPPQ----KDIFLMICEKLALKMLSNANLHLVSVDMPVAANLDDLSGISLRLSGEILNNSVPCLVTLTLKGTCAEPLEVSVKINCEETVFGLNLLNRIVNFLAEPP 1178    
BLAST of DCAR_027609 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2P5B7F9 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})

HSP 1 Score: 1228.39 bits (3177), Expect = 0.000e+0
Identity = 695/1232 (56.41%), Postives = 852/1232 (69.16%), Query Frame = 0
 
Query:    1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMAS-PYSEYLDSEIDGPDRD--FAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAK-NDDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDL----CASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVKGGTHSDLYGVDDSERASGSSDDDSN---SSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDP-QSRPNDFGELMSNRALESWLDESPD-SSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEPPL 1218
            MF QFGATA++LSKAST+VFRIGTDAHLYDDP+DVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSN FPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSIN FQKDLGDPNPLVRAWALRTMAGIRLHV+APIV+VAV KCARDPSVYVRKCAANALPKLHDLRLEENT  IEEIVGILLND+SPSVVGAAAAAFAS+CPNNL+LIGR++++LCE LPDVEEWGQI+LI ILLRYVIAR GLV+ES+M S  +SE   SE DG + D  F + E+   +    Y+S L  M S+ Y+EGP++YLS+ +  +K + +     FTS + N+DVKILLQCTSPLLWS+NSAV+LAAAG+HWIMA ++D++ IVKPLLF+LRSS+AS YV LCNIQVF+KAMPSLFA Y ED F+CSSD+Y IKALKL+IL++IAT++SI  +F+EFQDY+RD DRRFAADT+AA+G+C QRLP +ANTCLEGLLALT      +D  S  G++ VL+QAI+SI+SII+ DP  HEK  ++                            +  L A+ +P +             ++I  +    S+ +L P     V+ +L          T+ A+  ++            ++L + +  L C  T+E   T  +IL   +++  C    D+    C  KKLLS                           YL    +  E   +S++K++S LLA+ +F  + KS   EP+N+R YLPGSLSQIVLHAAPGY PLP+PCSLTI      +N       S     DD +  SGS D+++    SS GS +  +GSS      E+G A+E D+    LI FSD G+A       + E ND   S   DFGELMS RALESWLDE P  S+ NA + S    SSARIS+G +   +K KSY LLD VNGNGL+VDY FSSE+SS S   VC+EVSFKNCS EP   I L DE+     D+++QAL   ESS    +N V  I  +EEI  LEP Q+  +I++V FHHHLLP+KL L  +G + PVKLWPDIGYF+K +P+D + F  KES L+GMFEY R CTF DH+ EL  +KG+ S V DKFL +C +L LKMLSNANL L+SVDMP+  N DD SGLCLRF+ EILS   PCLIT+T++G C+EPLN ++KVNCEETVFGLNLLN+IV+FL EP L
Sbjct:    1 MFPQFGATAETLSKASTMVFRIGTDAHLYDDPEDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNLFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLGDPNPLVRAWALRTMAGIRLHVIAPIVLVAVGKCARDPSVYVRKCAANALPKLHDLRLEENTTTIEEIVGILLNDHSPSVVGAAAAAFASICPNNLSLIGRNFQRLCEILPDVEEWGQIILIGILLRYVIARYGLVQESVMFSLHHSENCKSENDGLESDTKFPLGEDNGELGCN-YESDLAHMVSQCYIEGPDEYLSRSSSINKDSSEIRWQHFTSIRSNEDVKILLQCTSPLLWSNNSAVLLAAAGVHWIMASRDDVKLIVKPLLFLLRSSNASKYVVLCNIQVFSKAMPSLFAPYFEDLFVCSSDSYHIKALKLDILASIATDTSISQVFKEFQDYIRDPDRRFAADTIAALGICVQRLPKMANTCLEGLLALTRQDFFASDFGSVDGEANVLVQAIMSIKSIIRPDPLSHEKVIIQ---------------------------LVRSLDAIKVPAA-----------RAMIIWMVGEYNSLGELIPRMLTTVLKYLAWCF------TSEALETKL------------QILNTTVKVLLCARTEEDRFTIEKILSYLLELAKCDLNYDVRDRACFLKKLLS--------------------------SYLDPQGVEGEPDCLSKNKDLSRLLAKSIFGGQAKSRFPEPSNHRIYLPGSLSQIVLHAAPGYEPLPKPCSLTI--DGLETNASGNQATSGPSVTDDLDSVSGSLDEETASYYSSQGSTVDSSGSSHGSD--ETGCANENDDGIDPLIQFSDAGHA-------HKEQNDASHSGSADFGELMSKRALESWLDEQPGLSNVNANKPSPIHGSSARISIGDIRGEIKRKSYVLLDPVNGNGLKVDYSFSSEISSVSTLLVCIEVSFKNCSMEPMSSITLVDEESGNVLDSADQALTMTESSVTCQDN-VPAIASMEEITSLEPDQAMTRILQVRFHHHLLPLKLALYRNGKRHPVKLWPDIGYFIKAVPLDIDTFIDKESHLKGMFEYTRSCTFSDHIGELNSDKGDSSPVTDKFLEICRSLALKMLSNANLFLVSVDMPIAANLDDASGLCLRFSSEILSTLKPCLITITVKGKCTEPLNISIKVNCEETVFGLNLLNRIVNFLVEPSL 1137    
BLAST of DCAR_027609 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J6HL62 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})

HSP 1 Score: 1220.3 bits (3156), Expect = 0.000e+0
Identity = 672/1226 (54.81%), Postives = 829/1226 (67.62%), Query Frame = 0
 
Query:    1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMAS-PYSEYLDSEIDGPDRD--FAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAK-NDDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDL----CASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVKGGTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPD-SSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDY-VFSSEMSSKSKFVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEP 1216
            MF QFGATA++LSKAST+VFRIGTDAHLYDDP+DV+I PLLDSKFDSEKCEALKRLLALIAQGFDVSN+FPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLH++APIV+VAV KCARDPSVYVRKCAANALPKLHDLRLEENT  +EEIVGILLND+SPSVVGAAAAAFASVCPNNL L GR++++LCE LPDVEEWGQI+LI +LLRYVIAR GLV+ES+M S  +SE   SE    + +  F + E++N      Y+S+L  M S  Y+EGP+KYLS+++  +K   +      TS + N+DVK+LLQCT+PLLWSHNSAV+LAAAG+HWIMA +ED++ IVKPLLF+LRSS AS YV LCNI+VFAKA+PSLFA Y EDFF+CSSD+Y IKALKL+IL++IAT+SSI  I++EFQDY+ D DRR AADT+AAIG+C QRLP +A+TCLEGLL LT  +    +  S  G++ VL+QAI+SI+SII+ DP  HEK  +R                            +  L ++ +P +             ++I  +    S+ KL P     V+ +L     S  + T                    ++L + +  L C   ++ L T  ++L   +++  C    D+    C  KKLLS  L+    +       + R +  LL + LF+ +                           KS   +PNN+R YLPGSLSQIVLHAAPGY PLP+PCSLTI       +   G   +    V D    SGS D+++ S   S++S AGS+G    DE GSA E  ENT  LI  SD GNA  A      + +  QS   DF ELMS RALESWLDE P  S+ N  E SS   SSARIS+G +  ++K KSY LLD VNGNGLRVDY   S   S  +  VC+EV  KNCS EP   I L DE+     D+++Q L T   SS P  +DV  +  VEEI  LEP Q  ++I+ VHFHHHLLP+KL L C+G++ PVKLWPDIGYF+K +PMD + F  +ES L+GMFEY R CTF DH+  L ++KG+ S+  DKFL +C +L  KMLSNAN+ L+SVDMP+  N DD SGLCLRF+ E+LS   PCLIT+T+ G C+EPLN ++KVNCEETVFGLNLLN++V+FL EP
Sbjct:    1 MFPQFGATAETLSKASTMVFRIGTDAHLYDDPEDVNIPPLLDSKFDSEKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHLIAPIVLVAVGKCARDPSVYVRKCAANALPKLHDLRLEENTVTVEEIVGILLNDHSPSVVGAAAAAFASVCPNNLPLAGRNFQRLCEILPDVEEWGQIILIGVLLRYVIARHGLVKESVMFSLHHSENCKSENGSLESEMKFPLAEDSN------YESELAHMISHCYIEGPDKYLSRLSDMNKDFSEIRWQCVTSVRSNEDVKLLLQCTAPLLWSHNSAVLLAAAGVHWIMASREDVKGIVKPLLFVLRSSIASNYVVLCNIRVFAKAIPSLFAPYFEDFFLCSSDSYHIKALKLDILASIATDSSISQIYKEFQDYITDPDRRIAADTIAAIGICVQRLPQMAHTCLEGLLTLTRQEIFAGEFGSVDGEANVLVQAIMSIKSIIRHDPLCHEKVIIR---------------------------LVRSLDSIKVPAA-----------RAIIIWMVGEYNSLGKLVPKMLTTVLKYLAWCFTSESLETKL------------------QILNTTVKVLVCASGEDTL-TFEKVLSYLLELAKCDLNYDVRDRACFLKKLLSSHLDHQAAEAEPGGLHKNRGLSCLLAKSLFAVQ--------------------------TKSALPQPNNHRIYLPGSLSQIVLHAAPGYEPLPKPCSLTIDVRETNES---GNLATSDPSVTDDLSVSGSLDEETASDYSSQLSSAGSNGGHGSDEFGSAGENGENTSPLIQISDAGNAFQA------QNHVSQSGSADFEELMSKRALESWLDEQPGLSNVNTYEPSSRNGSSARISIGDIRGKIKRKSYVLLDPVNGNGLRVDYSFSSEISSISTILVCIEVVLKNCSTEPMSNITLVDEESGHALDSADQTL-TPSDSSTPSQDDVPTLASVEEITSLEPDQIMQRIIHVHFHHHLLPLKLALYCNGIRHPVKLWPDIGYFIKAVPMDVDAFINEESHLKGMFEYTRSCTFSDHIGGLNNDKGDCSVATDKFLEICRSLASKMLSNANIYLVSVDMPIAANLDDASGLCLRFSSEVLSTLKPCLITITVDGKCTEPLNISIKVNCEETVFGLNLLNRVVNFLVEP 1127    
Match NameStatsDescription
A0A7J7H4D6E-Value: 0.000e+0, PID: 61.58AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more]
A0A6A4L041E-Value: 0.000e+0, PID: 59.10AP3B1_C domain-containing protein {ECO:0000259|SMA... [more]
A0A5J5BEB8E-Value: 0.000e+0, PID: 61.03AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more]
A0A834Z0N7E-Value: 0.000e+0, PID: 58.11(Uncharacterized protein {ECO:0000313|EMBL:KAF8397... [more]
A0A5A7PQ66E-Value: 0.000e+0, PID: 58.11AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more]
B9T4I4E-Value: 0.000e+0, PID: 57.95AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more]
A0A3Q7GUI1E-Value: 0.000e+0, PID: 57.26AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more]
A0A4D8ZJH8E-Value: 0.000e+0, PID: 55.59AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more]
A0A2P5B7F9E-Value: 0.000e+0, PID: 56.41AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more]
A0A7J6HL62E-Value: 0.000e+0, PID: 54.81AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more]

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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions.

For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins.

Data from this analysis can be viewed in JBrowse here.

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