MTSEDCMTGEYANRKETCICGYNLSDLVQEAQHRWLKPPEVLFILKNYED
SQLTDKPLQKPPGGSLFLFNKRVLRYFRKDGHSWRRKKDGRTVGEAHERL
KVGNAEALNCYYAHGELNPNFQRRSYWMLEPAYEHIVLVHYRDITEVRHS
GGSILQSSPGSYSTLNQSPSSYTTQVPGTTSFAPEFQEQIQILSNPGSVN
GSFQSDIKNDMINISDVIERNEEIYSSPKVDINQALKRLTQQLSLEDNCS
GDNESFYDDNGVSHDTEYNVHGQSSIFPNQLQDDSDHRIAQLFPDLCLDL
CLLSILGAITTMEIAVEVDMEGREHGGDGSRQKQGGRGGGGPRRRLRWRR
KETTDEAVVSGGVASPELWKTTGVAIKRRQWSKRSDGYSTEGDGKGHYWQ
PFEDDFSCNEENAILNELLGSYNNAAPAGSQETHLHIPNENEAFLSPSSK
KPVEEEESFEWADLAVNDTFSCPTSVLLPEEAEYFKIATYSPSMNVYGIN
SDHYSTVFEQVPTERPLEENPSLTVSQKQLFTIHEISPEWGYAHEATKPP
GCLMIECEGDMVFMKYCLNGIMPMTMSHEAIKVIVIGSFLCDPSDHVWTC
MFGEIEVPVQIIHDGVIRCQAPPSLPGKVTLCLTSSNRESCSEVREFEYR
ECPSSLPHSKLLEAEASKDSEELLFLVRFVQMLLSDPLISKREISGSGIE
LLGNVEGNEELWSGVIESLLAGNCTSSGIANWLLQELLKDKLQQWLSSRL
QQVNDLQGGSFSKKEQGIIHMVAGMGYEWALKPILNSGVNVNYRDTNGFT
ALHWAARFGREEMVAALIASGASAEAVTDPTKEAPTGKTPASIAAEYGYL
GLAGYLSEVSLTSHLSSLTIAESELSKNSASLEAERTINSISDISTITSE
DQQSFRDSLAAVRNTAEAAARIQAAFRAHSFRKRKLKEAAAAAFMANVDS
QDQYSLLSNDAQSLSAASKLFFRNTRDYNNAALSIQKKYRGWKSRRDFLA
FRQKVVKIQAHVRGHQVRKYYKVICWAVGILEKVVLRWRRGGVGLRGFRN
ESESIDGIEDKDEDIVTVFRKQKILSIDEAVARVLSMVTSSEARQQYRRM
LDKYRQAKAELGGPANAAAAGEAASTSLDMSNMESDGTY*
| Relationships |
|---|
| The polypeptide, DCAR_026454, derives from mRNA, DCAR_026454. |

Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Match: A0A2I4DIQ4 ((calmodulin-binding transcription activator 4-like isoform X1 {ECO:0000313|RefSeq:XP_018807030.1}))
HSP 1 Score: 1024.23 bits (2647), Expect = 0.000e+0
Identity = 590/1097 (53.78%), Postives = 737/1097 (67.18%), Query Frame = 0
Query: 21 GYNLSDLVQEAQHRWLKPPEVLFILKNYEDSQLTDKPLQKPPGGSLFLFNKRVLRYFRKDGHSWRRKKDGRTVGEAHERLKVGNAEALNCYYAHGELNPNFQRRSYWMLEPAYEHIVLVHYRDITEVRHSGGSILQSSPGSYSTLNQSPSSYTTQVPGTTSFAPEFQEQIQILSNPGSVNGSFQSDIKNDMINISDVIERNEEIYSSPKVDINQALKRLTQQLSLEDNCSGDNESFYDDNGVSHDT---EYNVHGQSSIFPNQLQDDSDHRIAQLFPDLCLDLCLLSILGAITTMEIAVEVDMEGREHGGDGSRQKQGGRGGGGPRRRLRWRRKETTDEAVVSGGVASPELWKTTGVAIKRRQWSKRSD-GYSTEGDGKGHYWQPFEDDFSCNEENAI-LNELLGSYNNAAPAGSQETHLHIPNENEAFLSPSSKKPVEEEESFEWADLAVNDTFSCPTSVLLPEEAEYFKIATYSPSMNVYGINSDHYSTVFEQVPTERPLEENPSLTVSQKQLFTIHEISPEWGYAHEATKPPGCLMIECEGDMVFMKYCLNGIMPMTMSHEAIKVIVIGSFLCDPSDHVWTCMFGEIEVPVQIIHDGVIRCQAPPSLPGKVTLCLTSSNRESCSEVREFEYRECPSSLPHSKLLEAEASKDSEELLFLVRFVQMLLSDPLISKREISGSGIELLGNVEGNEELWSGVIESLLAGNCTSSGIANWLLQELLKDKLQQWLSSRLQQVNDLQGGSFSKKEQGIIHMVAGMGYEWALKPILNSGVNVNYRDTNGFTALHWAARFGREEMVAALIASGASAEAVTDPTKEAPTGKTPASIAAEYGYLGLAGYLSEVSLTSHLSSLTIAESELSKNSASLEAERTINSISDISTITSEDQQSFRDSLAAVRNTAEAAARIQAAFRAHSFRKRKLKEAAAAAFMANVDSQDQYSLLSNDAQSLSAASKLFFRNTRDYNNAALSIQKKYRGWKSRRDFLAFRQKVVKIQAHVRGHQVRKYYKVICWAVGILEKVVLRWRRGGVGLRGFRNESESIDGIEDKDEDIVTVFRKQKI-LSIDEAVARVLSMVTSSEARQQYRRMLDKYRQAKAEL 1111
GY++ DL +EAQ RWLKP EVLFIL+N+E QLT++ Q+P GSLFLFNKRVLR+FRKDGH+WR+K+DG+TVGEAHERLKVGN EALNCYYAHGE NP+FQRRSYWML+PA+EHIVLVHYR +TE RH+ GS++ SPGS ST +QSP+SYTTQ PG+ S +F E Q S+PGS S + IKN+ +N D + R + SS ++++ AL++L +QLSL+++ D F + S+D+ EY N +QD S A L +D C + +E + +D E + G S + + P + R+ + + G GV D GY +GK H+ Q DF+ + ++ E+ S++ ++ SQ HL + NE LS S K P EEE S W ++ + TS+LL +EA+ F+ TY + NSD+Y+T+F+Q PLE + SLTV++KQ FTI EISPEWGY + ATK V++IGSFLCDPS+ W CMFG+IEVPVQII +GVIRC+AP LPGKVTLCLTS NRESCSEVREFEYR + H ++EA+K EELL LVRFVQMLLS+ + K + S I+LL + + + WS +IE+LL G+ TSSGI +W+ QELLKDKLQ WLSSR Q+ +D G S SKKEQGIIHM+AG+G+EWA+ PILNSGVN+N+RD G+TALHWAA+FGRE+MVAALIASGASA AVTDPT + P GKTPASIAA G+ GLAGYLSEV+LTSHLSSLT+ ESELSK SA +EAE T+N IS S DQ S +LAAVRN A+AAARIQ+AFRAHSFRKR+ +EA V S D Y + S+D +SA SKL FRN+R YN+AALSIQKKYRGWK R+DFLAFR+KVVKIQAHVRGHQVRK YKVICWAVGIL+KVVLRWRR GVGLRGFRNE+E ID E +DEDI+ VFRKQK+ ++IDEAV+ V+SMV S +ARQQY R+L+ YRQAKAEL
Sbjct: 5 GYDIKDLFREAQTRWLKPAEVLFILQNHEKYQLTEESPQQPTSGSLFLFNKRVLRFFRKDGHNWRKKRDGKTVGEAHERLKVGNVEALNCYYAHGEQNPDFQRRSYWMLDPAFEHIVLVHYRQLTEGRHTSGSVVLLSPGSSSTYSQSPTSYTTQNPGSNSMLSDFLEPYQSSSSPGSEVTS-EIAIKNNGMNDLDRMSRTGQRESSSELEVTHALRKLEEQLSLDEDSFKDINLFGNRGESSNDSYIPEYERE-------NSMQDQS---AASLHGPEYIDQCNRG-HALLRKLEKQLSLDEESFKEVGPFSNRGESPNDSDIPE----YDRENSKQDQYYRG---------HDGVQDNSNNLEILHDAGY----NGK-HHKQSLGQDFADGSKGSLSWEEVFESFDTSSCVESQRKHLFTLDGNEKPLSLSMKAPKEEEHS-HWIHSNADNIEN--TSLLLLKEADNFRFPTYHSLRETHETNSDYYTTLFDQGQIGMPLEADSSLTVAEKQKFTIREISPEWGYENVATK----------------------------------VVIIGSFLCDPSESAWACMFGDIEVPVQIIQEGVIRCEAPSHLPGKVTLCLTSGNRESCSEVREFEYRMNTRTCTHCHSQKSEATKSPEELLLLVRFVQMLLSELSMEKGDSLESDIDLLRRSKADYDSWSCIIEALLDGSGTSSGIIDWVFQELLKDKLQHWLSSRSQERSDQTGCSLSKKEQGIIHMIAGLGFEWAMSPILNSGVNINFRDIRGWTALHWAAQFGREKMVAALIASGASAGAVTDPTSQDPQGKTPASIAATSGHKGLAGYLSEVALTSHLSSLTLEESELSKGSAEVEAEMTLNKISQGSLTADGDQLSLIGTLAAVRNAAQAAARIQSAFRAHSFRKRQQREA--------VVSIDDYGINSDD---MSAMSKLAFRNSRYYNSAALSIQKKYRGWKGRQDFLAFRRKVVKIQAHVRGHQVRKSYKVICWAVGILDKVVLRWRRKGVGLRGFRNETEIID--ETEDEDILKVFRKQKVDVAIDEAVSLVMSMVESPDARQQYHRVLEGYRQAKAEL 1021
Match: A0A6P9E4Z6 ((calmodulin-binding transcription activator 4-like isoform X2 {ECO:0000313|RefSeq:XP_035542451.1}))
HSP 1 Score: 1018.45 bits (2632), Expect = 0.000e+0
Identity = 588/1097 (53.60%), Postives = 735/1097 (67.00%), Query Frame = 0
Query: 21 GYNLSDLVQEAQHRWLKPPEVLFILKNYEDSQLTDKPLQKPPGGSLFLFNKRVLRYFRKDGHSWRRKKDGRTVGEAHERLKVGNAEALNCYYAHGELNPNFQRRSYWMLEPAYEHIVLVHYRDITEVRHSGGSILQSSPGSYSTLNQSPSSYTTQVPGTTSFAPEFQEQIQILSNPGSVNGSFQSDIKNDMINISDVIERNEEIYSSPKVDINQALKRLTQQLSLEDNCSGDNESFYDDNGVSHDT---EYNVHGQSSIFPNQLQDDSDHRIAQLFPDLCLDLCLLSILGAITTMEIAVEVDMEGREHGGDGSRQKQGGRGGGGPRRRLRWRRKETTDEAVVSGGVASPELWKTTGVAIKRRQWSKRSD-GYSTEGDGKGHYWQPFEDDFSCNEENAI-LNELLGSYNNAAPAGSQETHLHIPNENEAFLSPSSKKPVEEEESFEWADLAVNDTFSCPTSVLLPEEAEYFKIATYSPSMNVYGINSDHYSTVFEQVPTERPLEENPSLTVSQKQLFTIHEISPEWGYAHEATKPPGCLMIECEGDMVFMKYCLNGIMPMTMSHEAIKVIVIGSFLCDPSDHVWTCMFGEIEVPVQIIHDGVIRCQAPPSLPGKVTLCLTSSNRESCSEVREFEYRECPSSLPHSKLLEAEASKDSEELLFLVRFVQMLLSDPLISKREISGSGIELLGNVEGNEELWSGVIESLLAGNCTSSGIANWLLQELLKDKLQQWLSSRLQQVNDLQGGSFSKKEQGIIHMVAGMGYEWALKPILNSGVNVNYRDTNGFTALHWAARFGREEMVAALIASGASAEAVTDPTKEAPTGKTPASIAAEYGYLGLAGYLSEVSLTSHLSSLTIAESELSKNSASLEAERTINSISDISTITSEDQQSFRDSLAAVRNTAEAAARIQAAFRAHSFRKRKLKEAAAAAFMANVDSQDQYSLLSNDAQSLSAASKLFFRNTRDYNNAALSIQKKYRGWKSRRDFLAFRQKVVKIQAHVRGHQVRKYYKVICWAVGILEKVVLRWRRGGVGLRGFRNESESIDGIEDKDEDIVTVFRKQKI-LSIDEAVARVLSMVTSSEARQQYRRMLDKYRQAKAEL 1111
GY++ DL +EAQ RWLKP EVLFIL+N+E QLT++ Q+P GSLFLFNKRVLR+FRKDGH+WR+K+DG+TVGEAHERLKVGN EALNCYYAHGE NP+FQRRSYWML+PA+EHIVLVHYR +TE RH+ GS++ SPGS ST +QSP+SYTTQ PG+ S +F E Q S+PGS S + IKN+ +N D + R + SS ++++ AL++L +QLSL+++ D F + S+D+ EY N +QD S A L +D C + +E + +D E + G S + + P + R+ + + G GV D GY +GK H+ Q DF+ + ++ E+ S++ ++ SQ HL + NE LS S K P EEE S W ++ + TS+LL +EA+ F+ TY + NSD+Y+T+F+Q PLE + SLTV++KQ FTI EISPEWGY + ATK V++IGSFLCDPS+ W CMFG+IEVPVQII +GVIRC+AP LPGKVTLCLTS NRESCSEVREFEYR + H ++EA+K EELL LVRFVQMLLS+ + K + S I+LL + + + WS +IE+LL G+ TSSGI +W+ QELLKDKLQ WLSSR Q+ +D G S SKKEQGIIHM+AG+G+EWA+ PILNSGVN+N+RD G+TALHWAA+FGRE+MVAALIASGASA AVTDPT + P GKTPASIAA G+ GLAGYLSEV+LTSHLSSLT+ ESELSK SA +EAE T+N IS S DQ S +LAAVRN A+AAARIQ+AFRAHSFRKR+ +EA V S D Y + S+D +SA SKL FRN+R YN+AALSIQKKYRGWK R+DFLAFR+KVVKIQAHVRGHQVRK YKVICWAVGIL+KVVLRWRR GVGLRGFRNE+E ID E +DEDI+ VFRKQK+ ++IDEAV+ V+SMV S +ARQQY R+L+ YRQAK L
Sbjct: 5 GYDIKDLFREAQTRWLKPAEVLFILQNHEKYQLTEESPQQPTSGSLFLFNKRVLRFFRKDGHNWRKKRDGKTVGEAHERLKVGNVEALNCYYAHGEQNPDFQRRSYWMLDPAFEHIVLVHYRQLTEGRHTSGSVVLLSPGSSSTYSQSPTSYTTQNPGSNSMLSDFLEPYQSSSSPGSEVTS-EIAIKNNGMNDLDRMSRTGQRESSSELEVTHALRKLEEQLSLDEDSFKDINLFGNRGESSNDSYIPEYERE-------NSMQDQS---AASLHGPEYIDQCNRG-HALLRKLEKQLSLDEESFKEVGPFSNRGESPNDSDIPE----YDRENSKQDQYYRG---------HDGVQDNSNNLEILHDAGY----NGK-HHKQSLGQDFADGSKGSLSWEEVFESFDTSSCVESQRKHLFTLDGNEKPLSLSMKAPKEEEHS-HWIHSNADNIEN--TSLLLLKEADNFRFPTYHSLRETHETNSDYYTTLFDQGQIGMPLEADSSLTVAEKQKFTIREISPEWGYENVATK----------------------------------VVIIGSFLCDPSESAWACMFGDIEVPVQIIQEGVIRCEAPSHLPGKVTLCLTSGNRESCSEVREFEYRMNTRTCTHCHSQKSEATKSPEELLLLVRFVQMLLSELSMEKGDSLESDIDLLRRSKADYDSWSCIIEALLDGSGTSSGIIDWVFQELLKDKLQHWLSSRSQERSDQTGCSLSKKEQGIIHMIAGLGFEWAMSPILNSGVNINFRDIRGWTALHWAAQFGREKMVAALIASGASAGAVTDPTSQDPQGKTPASIAATSGHKGLAGYLSEVALTSHLSSLTLEESELSKGSAEVEAEMTLNKISQGSLTADGDQLSLIGTLAAVRNAAQAAARIQSAFRAHSFRKRQQREA--------VVSIDDYGINSDD---MSAMSKLAFRNSRYYNSAALSIQKKYRGWKGRQDFLAFRRKVVKIQAHVRGHQVRKSYKVICWAVGILDKVVLRWRRKGVGLRGFRNETEIID--ETEDEDILKVFRKQKVDVAIDEAVSLVMSMVESPDARQQYHRVLEGYRQAKDGL 1021
Match: A0A6P6BGX0 ((calmodulin-binding transcription activator 4-like isoform X1 {ECO:0000313|RefSeq:XP_022776346.1}))
HSP 1 Score: 1006.51 bits (2601), Expect = 0.000e+0
Identity = 584/1180 (49.49%), Postives = 739/1180 (62.63%), Query Frame = 0
Query: 21 GYNLSDLVQEAQHRWLKPPEVLFILKNYEDSQLTDKPLQKPPGGSLFLFNKRVLRYFRKDGHSWRRKKDGRTVGEAHERLKVGNAEALNCYYAHGELNPNFQRRSYWMLEPAYEHIVLVHYRDITEVRHSGGSILQSSPGSYSTLNQSPSSYTTQVPGTTSFAPEFQEQIQILSNPGSVNGSFQSDIK-NDMIN-----------ISDVIERNEE---------------IYSSP-----------------------KVDINQALKRLTQQLSLEDNCSGDNESFYDDNGVSHDTEYNVHGQSSIFPNQLQDDSDHRIAQLFPDLCLDLCLLSILGAITTMEIAVEVDMEGREHGGDGSRQKQGGRGGGGPRRRLRWRRKETTDEAVVSGGVASPELWKTTGVAIKRRQWSKRSDGYS------TEGDGKGHYWQPFEDDFS-CNEENAILNELLGSYNNAAPAGSQETHLHIPNENEAFLSPSSKKPVEEEESFEWADLAVNDTFSCPTSVLLPEEAEYFKIATYSPSMNVYGINSDHYSTVFEQVPTERPLEENPSLTVSQKQLFTIHEISPEWGYAHEATKPPGCLMIECEGDMVFMKYCLNGIMPMTMSHEAIKVIVIGSFLCDPSDH--VWTCMFGEIEVPVQIIHDGVIRCQAPPSLPGKVTLCLTSSNRESCSEVREFEYRECPSSLPHSKLLEAEASKDSEELLFLVRFVQMLLSDPLISKREISGSGIELLGNVEGNEELWSGVIESLLAGNCTSSGIANWLLQELLKDKLQQWLSSRLQQVNDLQGGSFSKKEQGIIHMVAGMGYEWALKPILNSGVNVNYRDTNGFTALHWAARFGREEMVAALIASGASAEAVTDPTKEAPTGKTPASIAAEYGYLGLAGYLSEVSLTSHLSSLTIAESELSKNSASLEAERTINSISDISTITSEDQQSFRDSLAAVRNTAEAAARIQAAFRAHSFRKRKLKEAAAAAFMANVDSQDQYSLLSNDAQSLSAASKLFFRNTRDYNNAALSIQKKYRGWKSRRDFLAFRQKVVKIQAHVRGHQVRKYYKVICWAVGILEKVVLRWRRGGVGLRGFRNESESIDGIEDKDEDIVTVFRKQKI-LSIDEAVARVLSMVTSSEARQQYRRMLDKYRQAKAELGGPANAAAAGEAASTSL-DMSNMESDGTY 1139
GY++++L +EAQ RWLKP EVLFIL+N+E QLT +P QKP GSLFLFNKRVLR+FRKDGHSWR+KKDGRTVGEAHERLKVGN E LNCYYAHGE NP+FQRRSYWML+PAYEHIVLVHYR+I E +HS SI+QS P S S + SP+SY +Q PG+ S A + + Q LS+PGSV S IK N++ N +S ++R EE I SP D+++ + L+ S+E + ++ F +NG+ + EY I P LQ H + +L L L+ + +++ + D + E+G + ++Q P+ L + + + + S R + YS ++G G + Q + +D S ++E+ +L S N + SQ L S S P E++E W L N + +SVLL +EAE +I +YS ++ G NSD+Y+ + Q E PL + SLTV+QKQ FTI EISPEWGY+ EATK VI++GSFLCDPS+ W CMFGE EVP++II +GV+ C+APP LPGKVTLC+T NRESCSE+REFEYR SS L E K EELL LVRFVQMLLSD + K I LL + +++ WS VIE+LL G+ TSSGI +WLLQELLKDKLQ WL SR ++ D + SKK+QGIIHM AG+G+EWAL PILN GV++N+RD NG+TALHWAARFGRE+MVAALIASGASA AVTDPT + +GKT ASIAA G+ GLAGYLSEV+LTSHLSSLT+ ESELSK SA+++AE +NSIS S TSEDQ S +D+LAAVRN +AAARIQ AFRAHSFRKR+ KE AA A S D+Y + S++ + LS SKL F N R YN AALSIQKK+RGWK R+DFL+ RQKV+KIQAHVRG+Q+RK YKVICWAVG+L+KVVLRWRR GVGLRGFR+E E ID E +DEDI+ VFRKQK+ ++++EA++RVLSMV S +ARQQYRR+L++YRQAKAELG AASTSL D+ +MESD +
Sbjct: 5 GYDINNLFREAQARWLKPAEVLFILQNHEKYQLTQEPPQKPTSGSLFLFNKRVLRFFRKDGHSWRKKKDGRTVGEAHERLKVGNVETLNCYYAHGEQNPSFQRRSYWMLDPAYEHIVLVHYREINEAKHSLASIVQS-PVSSSAFSPSPNSYNSQNPGSNSLACDVHQTYQNLSSPGSVEVSSDIVIKHNEIDNSVEYTIPADLQVSQALKRIEEQLSLNEDSFKDSSASIVQSPVSSSAFSPSPNSYTSQNRGSNSLASDVHETFQNLSSPGSVEVS----SDIFMKNNGIDNTVEY-------ICPADLQ--VSHALKRLEEQLSLNEDSFKEMSPFCSLDGDTD-DSKFLEYGRETAKQD--------PQEDLLYEPDDIIQDHLYSQPA--------------------RVENYSNNFALLSDGGKNGEHSQVYSNDNSDGSKESLYWKNVLDSCKNQSGVDSQGRPL----------SSSRTGPTEQQEQSVW--LNFNGSDLKDSSVLLCQEAENVEIPSYSSAIQAIGTNSDYYTMLCNQDNIEIPLATDSSLTVAQKQKFTIWEISPEWGYSSEATK----------------------------------VIIVGSFLCDPSESESAWACMFGETEVPLEIIQEGVVCCKAPPHLPGKVTLCITDGNRESCSEIREFEYRVNASSCARCNLSHTEVPKSLEELLLLVRFVQMLLSDSSLQKDSIES---HLLRKSKADDDSWSHVIEALLIGSGTSSGIVDWLLQELLKDKLQLWLCSRSKETGDRSVCTMSKKDQGIIHMAAGLGFEWALNPILNHGVSINFRDINGWTALHWAARFGREKMVAALIASGASAGAVTDPTSQDLSGKTAASIAASSGHKGLAGYLSEVALTSHLSSLTLEESELSKGSAAVQAEMAVNSISKGSLATSEDQLSLKDTLAAVRNATQAAARIQNAFRAHSFRKRQQKEVAATAA-----SVDEYGISSDEIKGLSTMSKLAFGNARHYNLAALSIQKKFRGWKGRKDFLSLRQKVIKIQAHVRGYQIRKNYKVICWAVGVLDKVVLRWRRKGVGLRGFRSEPEPID--ESEDEDILKVFRKQKVDVAVNEALSRVLSMVDSPDARQQYRRLLERYRQAKAELGNTNEP-----AASTSLSDIDDMESDDFF 1080
Match: A0A2N9HFF5 (CG-1 domain-containing protein {ECO:0000259|PROSITE:PS51437})
HSP 1 Score: 982.63 bits (2539), Expect = 0.000e+0
Identity = 589/1126 (52.31%), Postives = 735/1126 (65.28%), Query Frame = 0
Query: 21 GYNLSDLVQEAQHRWLKPPEVLFILKNYEDSQLTDKPLQKPPGGSLFLFNKRVLRYFRKDGHSWRRKKDGRTVGEAHERLKVGNAEALNCYYAHGELNPNFQRRSYWMLEPAYEHIVLVHYRDITEVRHSGGSILQSSPGSYSTLNQSPSSYTTQVPGTTSFAPEFQEQIQILSNPGSVNGSFQSDIKNDMINISDVIERNEEIYSSPKVDINQALKRLTQQLSLEDNCSGDNESFYDDNGVSHDTEYNVHGQSSIFPNQLQDDSDHRIAQLFPDLCLDLCLLSILGAITTMEIAVEVDMEGREH-GGDGSRQKQGGRGGGGPRRRLRWRRKETTDEAVVSGGVASPELWKTTGVAIKRRQWSKRSDGYSTEGDGKGHYWQPFEDDFSCNEENAILNELL----GSYNNAAPAGSQETHLHIPNENEAFLSPSSKKPVEEEESFEWADLAVNDTFSCPTSVLLPEEAEYFKIATYSPSMNVYGINSDHYSTVFEQVPTERPLEENPSLTVSQKQLFTIHEISPEWGYAHEATKPPGCLMIECEGDMVFMKYCLNGIMPMTMSHEAIKVIVIGSFLCDPSDHVWTCMFGEIEVPVQIIHDGVIRCQAPPSLPGKVTLCLTSSNRESCSEVREFEYRECPSSLPHSKLLEAEASKDSEELLFLVRFVQMLLSDPLISKREISGSGIELLGNVEGNEELWSGVIESLLAGNCTSSGIANWLLQELLKDKLQQWLSSRLQQVNDLQGGSFSKKEQGIIHMVAGMGYEWALKPILNSGVNVNYRDTNGFTALHWAARFGREEMVAALIASGASAEAVTDPTKEAPTGKTPASIAAEYGYLGLAGYLSEVSLTSHLSSLTIAESELSKNSASLEAERTINSISDISTITSEDQQSFRDSLAAVRNTAEAAARIQAAFRAHSFRKRKLKEAAAAAFMANVDSQDQYSLLSNDAQSLSAASKLFFRNTRDYNNAALSIQKKYRGWKSRRDFLAFRQKVVKIQAHVRGHQVRKYYKVICWAVGILEKVVLRWRRGGVGLRGFRNESESIDGIEDKDEDIVTVFRKQKI-LSIDEAVARVLSMVTSSEARQQYRRMLDKYRQAKAELGGPANAAAAGEAASTSL-DMSNMESDGTY 1139
G++++DL QEAQ RWLKP EVLFIL+N+E QLT++P Q+P GSLFLFNKRVLR+FR+DGHSWR+KKDGRTVGEAHERLKVGN EALNCYYAHGE NP+FQRRSYWML+PAYEHIVLVHYR+I+E + S GS++ SPGS ST +QSPSSYT PG+ S +F + Q S+PGSV S +KN+ ++ D ++R + S ++++ AL+RL +QLSL ++ S FY + S+D++ Q Q +S + D C+ G +D R H G G G R R ++ E V G + P+LW+ +G + W+ D F + E L G+ N +P+G +P E E+E W + V++ + TS+ LP+EA+ FK YS + + N D+Y T F+Q T PLE + SLTV+QKQ F+I EISPEWGYA EAT KVI+IGSFLCDP + WTCMFG++EVP+QII +GV+ C+ PP LPGKVTLC+TS NRESCSEVREFEYR S+ H + EA+K EELL LVRFVQMLLSD SK++ +LL + +++LW VIE+LL G+ TSS +W+LQ LLKDKL QWL S ++ D G S SKKEQGIIHMVAG+G+EWAL PILN GVN+N+RD NG+TALHWAARFGRE+MVAALIASGASA AVTDP+ + P GKTPASIA G+ GLAGYLSEV+LTSHLSSLT+ ESELSK SA +EAE T+NSIS S ++EDQ S +D+LAAVRN A+AAARIQ+AFRAHSFRKR+ + A+AA S D Y + S+D +SA SKL FRN R YN+AALSIQKKYRGWKSR+DFLAFRQK+VK+QAHVRG+QVRK+YK ICWAVG ++KVVLRWRR GVGLRGFRN+++ ID E DEDI+ VFRKQK+ ++IDEAV+RVLSMV S EARQQY R+L+KYRQAKAELG + A STSL D+S ME + Y
Sbjct: 22 GFDINDLFQEAQTRWLKPAEVLFILQNHEKYQLTEEPPQQPTSGSLFLFNKRVLRFFRRDGHSWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNPSFQRRSYWMLDPAYEHIVLVHYREISEGKSSSGSVVLLSPGSSSTFSQSPSSYTKN-PGSNSIISDFFDPYQSSSSPGSVEVSSDMAVKNNGMDHLDTVDRRGQKDGSTELEVTHALRRLEEQLSLNED-SIKEIPFYSQDENSNDSDI----------LQYQRESAKQ----------DQCVALPHG-------PEHIDQRYRGHVGMQDDLNNLGFLSAAG--RNTRLPLLQSLGEVV--GRQSCPQLWR--------------------DGSNESLSWKEVFDSFDTSSGVEFQREHLYTMDGNGNPLSPSGK------VPKE--------------EQEHSHWLNFNVDNVEN--TSMSLPKEADRFKFPAYSSVIETHETNVDYYMTFFDQGHTGMPLESDSSLTVAQKQKFSIREISPEWGYASEAT----------------------------------KVIIIGSFLCDPLESAWTCMFGDVEVPLQIIQEGVVCCKTPPHLPGKVTLCITSGNRESCSEVREFEYRINTSACAHCNSSKTEATKSPEELLLLVRFVQMLLSDS--SKQKGDTVESQLLRRSKTDDDLWGHVIEALLVGSGTSSSTVDWILQVLLKDKLCQWLLSISKEGPDQTGCSLSKKEQGIIHMVAGLGFEWALNPILNYGVNINFRDINGWTALHWAARFGREKMVAALIASGASAGAVTDPSSQDPRGKTPASIATTSGHKGLAGYLSEVALTSHLSSLTLEESELSKGSAEVEAEITVNSISKESLTSNEDQLSLKDTLAAVRNAAQAAARIQSAFRAHSFRKRQQRRPASAA------SIDDYGINSDD---ISAMSKLAFRNPRYYNSAALSIQKKYRGWKSRKDFLAFRQKIVKLQAHVRGYQVRKHYKEICWAVGFIDKVVLRWRRKGVGLRGFRNDTQVID--ETGDEDILKVFRKQKVDVAIDEAVSRVLSMVESPEARQQYHRVLEKYRQAKAELGDIGSEA----VGSTSLGDVSEMEDEDLY 1021
Match: A0A834G7X2 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7124689.1}))
HSP 1 Score: 956.822 bits (2472), Expect = 0.000e+0
Identity = 584/1206 (48.42%), Postives = 724/1206 (60.03%), Query Frame = 0
Query: 19 ICGYNLSDLVQEAQHRWLKPPEVLFILKNYEDSQLTDKPLQKPPGGSLFLFNKRVLRYFRKDGHSWRRKKDGRTVGEAHERLKVGNAEALNCYYAHGELNPNFQRRSYWMLEPAYEHIVLVHYRDITEV-------------------------RHSGGSILQSSPGSYSTLNQSPSSYTTQVPGTTSFAPEFQEQIQILSNPGSVNGSFQSDIKNDMINISDVIERNEEIYSSPKVDINQALKRLTQQLSLEDNCSGDNESFYDDNGVSHDTEY------------NVHGQSSIFPNQLQDDSDHRIAQLFPDLCLDLCLLSILGAITTMEIAVEVDMEGREHGGDGSRQKQ----GGRGGGGPRRRLRWRRKETTDEAVVSGGVASPE----LWKTTGVAIKRRQWSKRSDGYSTEGDGKGHYWQPFEDDFSCNEENAILNELLGSYNNAAPAGSQETHLHIPNENEAFLSPSSKKPVEEEESFEWADLAVNDTFSCPTSVLLPEEAEYFKIATYSPSMNVYGINSDHYSTVFEQVPTERPLEENPSLTVSQKQLFTIHEISPEWGYAHEATKPPGCLMIECEGDMVFMKYCLNGIMPMTMSHEAIKVIVIGSFLCDPSDHVWTCMFGEIEVPVQIIHDGVIRCQAPPSLPGKVTLCLTSSNRESCSEVREFEYRECPSSLPHSKLLEAEASKDSEELLFLVRFVQMLLSDPLISKREISGSGIELLGNVEGNEELWSGVIESLLAGNCTSSGIANWLLQELLKDKLQQWLSSRLQQVNDLQGGSFSKKEQGIIHMVAGMGYEWALKPILNSGVNVNYRDTNGFTALHWAARFGR------------------------------------EEMVAALIASGASAEAVTDPTKEAPTGKTPASIAAEYGYLGLAGYLSEVSLTSHLSSLTIAESELSKNSASLEAERTINSISDI--STITSEDQQSFRDSLAAVRNTAEAAARIQAAFRAHSFRKRKLKEAAAAAFMANVDSQDQYSLLSNDAQSLSAASKLFFRNTRDYNNAALSIQKKYRGWKSRRDFLAFRQKVVKIQAHVRGHQVRKYYKVICWAVGILEKVVLRWRRGGVGLRGFRNESESIDGIEDKDEDIVTVFRKQKI-LSIDEAVARVLSMVTSSEARQQYRRMLDKYRQAKAELGGPANAAAAGEAASTSL-DMSNMESDGTY 1139
+C YNL DLVQEA+ RWLKP EVLFIL+N+ + QLT +P +KP GSL LFNKRVLR+FRKDGHSWR+KKDGRTVGEAHERLKVGN EALNCYYAHGE NP FQRRSYWML+P EHIVLVHYRDI E RHS GS SP S STL+QSPSSYT Q PG+ + E E Q +PGS+ S + K ++ +IER E+ + ++++ QAL+RL QLSL D+ + F ++N S+D+E +V + F N+ ++ +D + D C L LG + R+H G G+R++ + + L W KE D S G S E G+ R + GD + + W F+ N +++ + S N P+ S + ++ + + P+SK +E E F + + P + + +EYF +T F+Q LE + SLT++Q+Q FTI EISPEWGYA EAT KV ++GSFLCDPS+ WTCMFG+IEVPV +I GVI C APP LPGKVTLC+TS NRESCSEVREFEYR PSS H + E +K EELL LVRFVQMLLSD + K + + SGI+ G + E+ W VIE+LL G+ T+S +WL+QELLKDKLQQWLSSRLQ D G S SKKEQG+IHM+AG+G+EWAL ++NSGV+ N+RD NG+TALHWAA FGR E+MVAALIASGA+A AVTDP+ PTGKTPASIAA+ G+ GLAGYLSEV LTSHLSSL + E ELS SA +EAE +NSIS S T+ED S + +LAAVRN +AAARIQAAFRAHSFR+R+ KE A+ A S D Y++LSND Q LS ASKL FRN RD+N AALSIQKK+RGWK R+DFLAFR+KVVKIQAH RGHQVRK YKVICWAVGILEKVVLRWRR GVGLRG+R+ESESID E +DEDI+ VFRKQK+ ++ID+A +RVLSMV S ARQQY R+L++Y+QAKAE G E STS D++ ME++ Y
Sbjct: 28 VC-YNLHDLVQEAKTRWLKPAEVLFILQNHTEDQLTHEPARKPTSGSLLLFNKRVLRFFRKDGHSWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEENPLFQRRSYWMLDPTCEHIVLVHYRDIGESHMVGAIGANLSFSIDISSCIHELQGRHSSGST-SLSPESPSTLSQSPSSYTAQHPGSLTEISELNEPYQ---SPGSIEVSSDAVFKTKGMDHLGMIERKGEVVGTSELEVTQALRRLEMQLSLTDDVVEEIGPFCNENENSNDSEALRRLEMQLSLTDDVVEEIGPFCNENENSNDSEA--IISDECRSTASLDELGTLM-----------WRQHSG-GNREENPHPLAQQVMVECKDSLSW--KEMLDVNTSSPGAESQERLFPFSDENGIPHSR---------HDRLGDQERYQWMNFDGYKLSNCDDSRTPD---SNTNLQPSTS---YKYLSSSENPLILPASKLLSQEIEIFNFPAYS-------PVNNVSYSNSEYF-------------------TTFFDQGQNGMHLEADSSLTIAQEQKFTIREISPEWGYASEAT----------------------------------KVFIVGSFLCDPSEGAWTCMFGDIEVPVHMIQQGVISCLAPPHLPGKVTLCITSGNRESCSEVREFEYRVQPSSCAHCGSSQKETTKSPEELLLLVRFVQMLLSDTSMQKGDNTESGIDPWGKLRAREDSWGHVIEALLLGSWTTSSTTDWLMQELLKDKLQQWLSSRLQGECDESGCSLSKKEQGVIHMIAGLGFEWALNSVINSGVSTNFRDINGWTALHWAAHFGRYNRMTTEPPELNNHSGLLLVFCHRRASPRQGPNPAGEKMVAALIASGAAAGAVTDPSSLDPTGKTPASIAAKSGHKGLAGYLSEVELTSHLSSLKMEEKELSNGSADVEAEIAVNSISQSQRSFTTNEDHNSLKVTLAAVRNAGQAAARIQAAFRAHSFRRRQEKEVASDA-----ASVDDYNILSNDIQGLSVASKLAFRNARDHNTAALSIQKKFRGWKGRKDFLAFRKKVVKIQAHFRGHQVRKQYKVICWAVGILEKVVLRWRRKGVGLRGYRHESESID--ESEDEDIIKVFRKQKVEVAIDKAFSRVLSMVDSPNARQQYSRVLERYQQAKAEYEG-----TESEVTSTSQSDITYMENEDAY 1125
Match: A0A4U5NNK9 ((Calmodulin-binding family protein {ECO:0000313|EMBL:TKR84534.1}))
HSP 1 Score: 917.916 bits (2371), Expect = 0.000e+0
Identity = 544/1125 (48.36%), Postives = 698/1125 (62.04%), Query Frame = 0
Query: 21 GYNLSDLVQEAQHRWLKPPEVLFILKNYEDSQLTDKPLQKPPGGSLFLFNKRVLRYFRKDGHSWRRKKDGRTVGEAHERLKVGNAEALNCYYAHGELNPNFQRRSYWMLEPAYEHIVLVHYRDITEVRHSGGSILQSSP-GSYSTLNQSPSSYTTQVPGTTSFAPEFQEQIQILSNPGSVNGSFQSDIKNDMINISDVIERNEEIYSSPKVDINQALKRLTQQLSLEDNCSGDNESFYDDNGVSHDTEYNVHGQSSIFPNQLQDDSDHRIAQLFPDLCLDLCL----LSILGAITTMEIAVEVDMEGREHGGDGSRQKQGGRGGGGPRRRLRWRRKETTDEAVVSGGVASPELWKTTGVAIKRRQWSKRSDGYSTEGDGKGHYWQPFEDDFS-CNEENAILNELLGSYNNAAPAGSQETHLHIPNENEAFLSPSSKKPVEEEESFEWADLAVNDTFSCPTSVLLPEEAEYFKIATYSPSMNVYGINSDHYSTVFEQVPTERPLEENPSLTVSQKQLFTIHEISPEWGYAHEATKPPGCLMIECEGDMVFMKYCLNGIMPMTMSHEAIKVIVIGSFLCDPSDHVWTCMFGEIEVPVQIIHDGVIRCQAPPSLPGKVTLCLTSSNRESCSEVREFEYRECPSSLPHSKLLEAEASKDSEELLFLVRFVQMLLSDPLISKREISGSGIELLGNVEGNEELWSGVIESLLAGNCTSSGIANWLLQELLKDKLQQWLSSRLQQVNDLQGGSFSKKEQGIIHMVAGMGYEWALKPILNSGVNVNYRDTNGFTALHWAARFGREEMVAALIASGASAEAVTDPTKEAPTGKTPASIAAEYGYLGLAGYLSEVSLTSHLSSLTIAESELSKNSASLEAERTINSISDISTITSEDQQSFRDSLAAVRNTAEAAARIQAAFRAHSFRKRKLKEAAAAAFMANVDSQDQYSLLSNDAQSLSAASKL-FFRNTRDYNNAALSIQKKYRGWKSRRDFLAFRQKVVKIQAHVRGHQVRKYYKVICWAVGILEKVVLRWRRGGVGLRGFRNESESIDGIEDKDEDIVTVFRKQKI-LSIDEAVARVLSMVTSSEARQQYRRMLDKYRQAKAELGGPANAAAAGEAASTSL-DMSNMESD 1136
GY+++ L +EAQ RWLKP EV+FIL N++ Q T+KP +KP GSLFLFNKRVL++FR+DGH+WR+KKDGR+VGEAHERLKVGN EALNCYYAHGE N NFQRRSYWML+ A+EHIVLVHYRDITE + S GS Q SP SYS PGT N GS + IS V E + S VD++ L DNGV E++ +++ + Q F L L L +G E A+ D E+ G+ S++ Q G + + ++ GG+A G ++R + D GD G Y Q + ++ +EE NE + SY ++ QE S S +P +E+E+ W + + + +S+LLP++ E F++ YS + + NS+ Y+ +++Q P+E + +LTV+Q+Q FTIHEISPEWGYA EATK VI++GSFLCDPS+ W CMFG+ EVP+QII +GVI C++PP PGKVTLC+TS NRESCSE+R FEYR SS H L + EA+K +ELL L RFVQMLLSD + + + GI LL ++ +++ W +IE+LL G+ TSS +WLLQ+LL DKLQQWLSS+ Q+ +D G SFSKKEQGIIHMVAG+G+EWAL PIL+ GV +N+RD NG+TALHWAA FGRE+MVA+L+ASGASA AVTDP+ + P GKTPASIAA G++GLAGYLSEV+LTSHLSSL + ES+LS SA ++AERT++SIS S EDQ S +D+LAA RN A AAARIQ+AFRAHSFRKR +EA S D+Y + + + Q LS+ SKL F N+ N+AALSIQKKYRGWK+RRDFLA RQKVVKIQAHVRG+Q+RK YK+ICWAVGIL+K VLRWRR G+GLRGFRN ESID E +DEDI+ +FRKQK+ +I+EAV+RVL+MV S +ARQQY R L ++ QAKAELGG + AASTSL D + ME+D
Sbjct: 4 GYDINSLFEEAQTRWLKPAEVVFILHNHDKYQFTEKPPEKPTSGSLFLFNKRVLKFFRRDGHNWRKKKDGRSVGEAHERLKVGNVEALNCYYAHGEQNQNFQRRSYWMLDQAFEHIVLVHYRDITEGKPSPGSAAQLSPIFSYS-------------PGT---------------NTSQTQGSTSA--------ISSVYEPYQSFSSPASVDVSSGLG-------------------IKDNGVDRTAEFS-------------SSANNEVTQFFRRLEEQLSLNEDSAEEIGPFGAEEGAIN-DTRILEYVGNISKEDQSKNLLHGSQYIVDYQSY---------GGLA--------GNQLERNNLAPLQDA----GDS-GAYQQSYSHYYTDGSEEPLPWNEGIESYKTSSGIEYQEKTK----------SSLSTEPAQEQENSYWINFDEPNVIN--SSLLLPQDVEKFELPAYSSVIETHENNSNFYAMLYDQDHLGIPIEADSNLTVAQQQKFTIHEISPEWGYATEATK----------------------------------VIIVGSFLCDPSESSWMCMFGDTEVPLQIIQEGVICCESPPHHPGKVTLCITSGNRESCSEIRSFEYRAKDSSCAHCNLSQTEATKSPDELLLLFRFVQMLLSDYSLQRGDSVEMGIHLLRELKADDDTWGDIIEALLVGSGTSSMTVDWLLQQLLNDKLQQWLSSKSQEGHDQPGCSFSKKEQGIIHMVAGLGFEWALSPILSHGVGINFRDINGWTALHWAAHFGREKMVASLLASGASAGAVTDPSPQDPIGKTPASIAATRGHMGLAGYLSEVALTSHLSSLRLEESQLSIGSAEVQAERTLDSISKESFAAIEDQISLKDTLAAARNAALAAARIQSAFRAHSFRKRLQREAT---------SLDEYGICAGEIQGLSSMSKLAFHNNSHVINSAALSIQKKYRGWKNRRDFLALRQKVVKIQAHVRGYQIRKNYKIICWAVGILDKAVLRWRRKGIGLRGFRNVMESID--ESEDEDILKIFRKQKVDGAINEAVSRVLAMVKSPDARQQYHRTLKQFHQAKAELGGTSEP-----AASTSLADETEMEND 975
Match: A0A834L8F6 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7123514.1}))
HSP 1 Score: 908.672 bits (2347), Expect = 0.000e+0
Identity = 561/1108 (50.63%), Postives = 695/1108 (62.73%), Query Frame = 0
Query: 19 ICGYNLSDLVQEAQHRWLKPPEVLFILKNYEDSQLTDKPLQKPP----GGSLFLFNKRVLRYFRKDGHSWRRKKDGRTVGEAHERLKVGNAEALNCYYAHGELNPNFQRRSYWMLEPAYEHIVLVHYRDITEVRHSGGSILQSS---PGSYSTLNQSPSSYTTQVPGTTSFAPEFQEQIQILSNPGSVNGSFQSDIKNDMINISDVIERNEEIYSSPKVDINQALKRLTQQLSLEDNCSGDNESFYDDNGVSHDTEYNVHGQSSIFPNQLQDDSDHRIAQLFPDLCLDLCLLSILGAITTMEIAVEVDMEGREHGGDGSRQKQGGRGGGGPRRRLRWRRKETTDEAVVSGGVASPELWKTTGVAIKRRQWSKRSDGYSTEGDGKGHYWQ----PFEDDFSCNEENAILNELLGSYNNAAPAGSQETHLHIPNENEAFLSPSSKKPVEEEESFEWADLAVNDTFSCPTSVLLPEEAEYFKIATYSPSMNVYGINSDHYSTVFEQVPTERPLEENPSLTVSQKQLFTIHEISPEWGYAHEATKPPGCLMIECEGDMVFMKYCLNGIMPMTMSHEAIKVIVIGSFLCDPSDHVWTCMFGEIEVPVQIIHDGVIRCQAPPSLPGKVTLCLTSSNRESCSEVREFEYRECPSSLPHSKLLEAEASKDSEELLFLVRFVQMLLSDPLISKREISGSGIELLGNVEGNEELWSGVIESLLAGNCTSSGIANWLLQELLKDKLQQWLS--SRLQQVNDLQGGSFSKKEQGIIHMVAGMGYEWALKPILNSGVNVNYRDTNGFTALHWAARFGREEMVAALIASGASAEAVTDPTKEAPTGKTPASIAAEYGYLGLAGYLSEVSLTSHLSSLTIAESELSKNSASLEAERTINSISDISTITSEDQQSFRDSLAAVRNTAEAAARIQAAFRAHSFRKRKLKEAAAAAFMANVDSQDQYSLLSNDAQSLSAASKLFFRNTRDYNNAALSIQKKYRGWKSRRDFLAFRQKVVKIQAHVRGHQVRKYYKVICWAVGILEKVVLRWRRGGVGLRGFRNESESIDGIEDKDEDIVTVFRKQKI-LSIDEAVARVLSMVTSSEARQQYRRMLDKYRQAKAELG 1112
I GYN+ DLV+EAQ RWLKP EVLFIL NY++ QLT +PLQKP GGSLFLFNKRVLR+FRKDGH+WR+KKDGRTVGEAHERLKVGN EALNCYYAHGE N FQRRSYWML+PAYEHIVLVHYR+I+E R S GS+ SS GS ST NQSPS+ Q P + + E Q +P +V S + I+N+ I+ D I EI SS ++++ QAL+RL +QLSL D+ E ++N S+D + ++ Q P F D +DL L +Q+ GG G + + +E +V + P WK R ++ ++ S DG G+ Q P D N N GS N P+ S E L N F +S +E E+F K YSP N N D++ F+Q LE + LT++ KQ FTI EISP W ++ AT KV+++GSFLCDPS+ WTCMFG+IEVP+QII +GVI CQAP PGKVTLC+TS NRESCSE+REFEY + PSS HS L +E ++ EE+L LVRFV+MLLSDPL+ + +I+ S ++LG E+ W VIE LL G+ TSSG +WLL+ELLKDKL QWLS SR Q QG SKKEQG+IHMVAG+G+EWALKPILNSGV V+ RD NG+TALHWAAR+GRE+MVAAL+ASGASA A+TDP E P GKTPAS+AA G+ GLAGYLSEV+LTSHLSSLT+ E+ELSK SA++E+E ++SIS + +++D S +D+ AAVRN +AAARIQAAFR SFR+R+ +E AAAA + D++++LS+D +SAASK F + RD N AALSIQKKYRGWK R+ +LAFR KVVKIQAHVRG+QVRK Y++ICWAVG+LEKVVLRWRR GVGLRGFR E ESID E ++EDI+ VFRKQ + +IDEAV RVLSMV S +ARQQYRRMLD+YRQAKAE G
Sbjct: 12 ISGYNIDDLVREAQIRWLKPAEVLFILHNYKEDQLTHRPLQKPASRLLGGSLFLFNKRVLRFFRKDGHNWRKKKDGRTVGEAHERLKVGNIEALNCYYAHGEQNSKFQRRSYWMLDPAYEHIVLVHYREISEERQSSGSM--SSWWLAGSTSTFNQSPSALAAQHPAAAAIIGDVYEPYQ---SPEAVEVSSDAVIQNNGIDHLDRIAGTPEISSSSELEVGQALRRLEEQLSLNDDSF---EEIKNEN--SNDLDLMLNYQCRYVP--------------FSDDEIDLVL----------------------------QQETGGNG--------EFNHQPMVEEFIVERKDSLP--WKEILEFPPRAEFQEKDIHTS---DGNGYVLQVQESPRTDFGRPNSPNCNTIVSSGSVRNLQPSVSSEYPL---NSGSPFELSTSISQSQEVENF--------------------------KYPAYSPLTNFLYTNPDYFPEPFDQGQLGIDLEADSRLTIAPKQKFTIREISPGWSFSTFAT----------------------------------KVVIVGSFLCDPSEFTWTCMFGDIEVPIQIIQEGVICCQAPHRPPGKVTLCITSGNRESCSEIREFEYHDAPSSWAHSSLSHSETTRCPEEMLLLVRFVRMLLSDPLV-QGDINESVRDILGKSGAGEDSWGHVIEGLLDGSWTSSGTTDWLLEELLKDKLLQWLSFRSRCGQ----QGCFLSKKEQGVIHMVAGLGFEWALKPILNSGVIVDLRDINGWTALHWAARYGREKMVAALMASGASAGALTDPNSEDPKGKTPASLAAASGHKGLAGYLSEVALTSHLSSLTLEENELSKGSAAVESEIALSSISKRTLASNKDHLSLKDTFAAVRNAVQAAARIQAAFRTLSFRRRQKREDAAAAC-----TLDEHNILSSDILGMSAASKPAFHSARDTNTAALSIQKKYRGWKGRKGYLAFRHKVVKIQAHVRGYQVRKQYEIICWAVGVLEKVVLRWRRKGVGLRGFRPEMESID--ESEEEDILKVFRKQNVEKAIDEAVTRVLSMVDSPDARQQYRRMLDRYRQAKAEKG 979
Match: A0A6P6BGX5 ((calmodulin-binding transcription activator 4-like isoform X2 {ECO:0000313|RefSeq:XP_022776347.1}))
HSP 1 Score: 896.345 bits (2315), Expect = 0.000e+0
Identity = 546/1180 (46.27%), Postives = 698/1180 (59.15%), Query Frame = 0
Query: 21 GYNLSDLVQEAQHRWLKPPEVLFILKNYEDSQLTDKPLQKPPGGSLFLFNKRVLRYFRKDGHSWRRKKDGRTVGEAHERLKVGNAEALNCYYAHGELNPNFQRRSYWMLEPAYEHIVLVHYRDITEVRHSGGSILQSSPGSYSTLNQSPSSYTTQVPGTTSFAPEFQEQIQILSNPGSVNGSFQSDIK-NDMIN-----------ISDVIERNEE---------------IYSSP-----------------------KVDINQALKRLTQQLSLEDNCSGDNESFYDDNGVSHDTEYNVHGQSSIFPNQLQDDSDHRIAQLFPDLCLDLCLLSILGAITTMEIAVEVDMEGREHGGDGSRQKQGGRGGGGPRRRLRWRRKETTDEAVVSGGVASPELWKTTGVAIKRRQWSKRSDGYS------TEGDGKGHYWQPFEDDFS-CNEENAILNELLGSYNNAAPAGSQETHLHIPNENEAFLSPSSKKPVEEEESFEWADLAVNDTFSCPTSVLLPEEAEYFKIATYSPSMNVYGINSDHYSTVFEQVPTERPLEENPSLTVSQKQLFTIHEISPEWGYAHEATKPPGCLMIECEGDMVFMKYCLNGIMPMTMSHEAIKVIVIGSFLCDPSDH--VWTCMFGEIEVPVQIIHDGVIRCQAPPSLPGKVTLCLTSSNRESCSEVREFEYRECPSSLPHSKLLEAEASKDSEELLFLVRFVQMLLSDPLISKREISGSGIELLGNVEGNEELWSGVIESLLAGNCTSSGIANWLLQELLKDKLQQWLSSRLQQVNDLQGGSFSKKEQGIIHMVAGMGYEWALKPILNSGVNVNYRDTNGFTALHWAARFGREEMVAALIASGASAEAVTDPTKEAPTGKTPASIAAEYGYLGLAGYLSEVSLTSHLSSLTIAESELSKNSASLEAERTINSISDISTITSEDQQSFRDSLAAVRNTAEAAARIQAAFRAHSFRKRKLKEAAAAAFMANVDSQDQYSLLSNDAQSLSAASKLFFRNTRDYNNAALSIQKKYRGWKSRRDFLAFRQKVVKIQAHVRGHQVRKYYKVICWAVGILEKVVLRWRRGGVGLRGFRNESESIDGIEDKDEDIVTVFRKQKI-LSIDEAVARVLSMVTSSEARQQYRRMLDKYRQAKAELGGPANAAAAGEAASTSL-DMSNMESDGTY 1139
GY++++L +EAQ RWLKP EVLFIL+N+E QLT +P QKP GSLFLFNKRVLR+FRKDGHSWR+KKDGRTVGEAHERLK +HS SI+QS P S S + SP+SY +Q PG+ S A + + Q LS+PGSV S IK N++ N +S ++R EE I SP D+++ + L+ S+E + ++ F +NG+ + EY I P LQ H + +L L L+ + +++ + D + E+G + ++Q P+ L + + + + S R + YS ++G G + Q + +D S ++E+ +L S N + SQ L S S P E++E W L N + +SVLL +EAE +I +YS ++ G NSD+Y+ + Q E PL + SLTV+QKQ FTI EISPEWGY+ EATK VI++GSFLCDPS+ W CMFGE EVP++II +GV+ C+APP LPGKVTLC+T NRESCSE+REFEYR SS L E K EELL LVRFVQMLLSD + K I LL + +++ WS VIE+LL G+ TSSGI +WLLQELLKDKLQ WL SR ++ D + SKK+QGIIHM AG+G+EWAL PILN GV++N+RD NG+TALHWAARFGRE+MVAALIASGASA AVTDPT + +GKT ASIAA G+ GLAGYLSEV+LTSHLSSLT+ ESELSK SA+++AE +NSIS S TSEDQ S +D+LAAVRN +AAARIQ AFRAHSFRKR+ KE AA A S D+Y + S++ + LS SKL F N R YN AALSIQKK+RGWK R+DFL+ RQKV+KIQAHVRG+Q+RK YKVICWAVG+L+KVVLRWRR GVGLRGFR+E E ID E +DEDI+ VFRKQK+ ++++EA++RVLSMV S +ARQQYRR+L++YRQAKAELG AASTSL D+ +MESD +
Sbjct: 5 GYDINNLFREAQARWLKPAEVLFILQNHEKYQLTQEPPQKPTSGSLFLFNKRVLRFFRKDGHSWRKKKDGRTVGEAHERLKA---------------------------------------------KHSLASIVQS-PVSSSAFSPSPNSYNSQNPGSNSLACDVHQTYQNLSSPGSVEVSSDIVIKHNEIDNSVEYTIPADLQVSQALKRIEEQLSLNEDSFKDSSASIVQSPVSSSAFSPSPNSYTSQNRGSNSLASDVHETFQNLSSPGSVEVS----SDIFMKNNGIDNTVEY-------ICPADLQ--VSHALKRLEEQLSLNEDSFKEMSPFCSLDGDTD-DSKFLEYGRETAKQD--------PQEDLLYEPDDIIQDHLYSQPA--------------------RVENYSNNFALLSDGGKNGEHSQVYSNDNSDGSKESLYWKNVLDSCKNQSGVDSQGRPL----------SSSRTGPTEQQEQSVW--LNFNGSDLKDSSVLLCQEAENVEIPSYSSAIQAIGTNSDYYTMLCNQDNIEIPLATDSSLTVAQKQKFTIWEISPEWGYSSEATK----------------------------------VIIVGSFLCDPSESESAWACMFGETEVPLEIIQEGVVCCKAPPHLPGKVTLCITDGNRESCSEIREFEYRVNASSCARCNLSHTEVPKSLEELLLLVRFVQMLLSDSSLQKDSIES---HLLRKSKADDDSWSHVIEALLIGSGTSSGIVDWLLQELLKDKLQLWLCSRSKETGDRSVCTMSKKDQGIIHMAAGLGFEWALNPILNHGVSINFRDINGWTALHWAARFGREKMVAALIASGASAGAVTDPTSQDLSGKTAASIAASSGHKGLAGYLSEVALTSHLSSLTLEESELSKGSAAVQAEMAVNSISKGSLATSEDQLSLKDTLAAVRNATQAAARIQNAFRAHSFRKRQQKEVAATAA-----SVDEYGISSDEIKGLSTMSKLAFGNARHYNLAALSIQKKFRGWKGRKDFLSLRQKVIKIQAHVRGYQIRKNYKVICWAVGVLDKVVLRWRRKGVGLRGFRSEPEPID--ESEDEDILKVFRKQKVDVAVNEALSRVLSMVDSPDARQQYRRLLERYRQAKAELGNTNEP-----AASTSLSDIDDMESDDFF 1035
Match: A0A5J5AFJ3 (CG-1 domain-containing protein {ECO:0000259|PROSITE:PS51437})
HSP 1 Score: 830.861 bits (2145), Expect = 0.000e+0
Identity = 447/749 (59.68%), Postives = 537/749 (71.70%), Query Frame = 0
Query: 391 EGDGKGHYWQPFEDDFSCNEENAI-LNELLGSYNNAAPAGSQETHLHIPNENEAFLSPSSKKPVEEEESFEWADLAVNDTFSCPTSVLLPEEAEYFKIATYSPSMNVYGINSDHYSTVFEQVPTERPLEENPSLTVSQKQLFTIHEISPEWGYAHEATKPPGCLMIECEGDMVFMKYCLNGIMPMTMSHEAIKVIVIGSFLCDPSDHVWTCMFGEIEVPVQIIHDGVIRCQAPPSLPGKVTLCLTSSNRESCSEVREFEYRECPSSLPHSKLLEAEASKDSEELLFLVRFVQMLLSDPLISKREISGSGIELLGNVEGNEELWSGVIESLLAGNCTSSGIANWLLQELLKDKLQQWLSSRLQQVNDLQGGSFSKKEQGIIHMVAGMGYEWALKPILNSGVNVNYRDTNGFTALHWAARFGREEMVAALIASGASAEAVTDPTKEAPTGKTPASIAAEYGYLGLAGYLSEVSLTSHLSSLTIAESELSKNSASLEAERTINSISDISTITSEDQQSFRDSLAAVRNTAEAAARIQAAFRAHSFRKRKLKEAAAAAFMANVDSQDQYSLLSNDAQSLSAASKLFFRNTRDYNNAALSIQKKYRGWKSRRDFLAFRQKVVKIQAHVRGHQVRKYYKVICWAVGILEKVVLRWRRGGVGLRGFRNESESIDGIEDKDEDIVTVFRKQKI-LSIDEAVARVLSMVTSSEARQQYRRMLDKYRQAKAELGGPANAAAAGEAASTSL-DMSNMESD 1136
EG+ H Q +F + +I E+L ++ SQE HL+ + N P + P+EE E W D N+ + +S+LLP+E E F+ YSP+ N + NS +Y+T+F+Q LE + SLT+SQKQ FTI EISPEWGYA EATK VI+IGSFLCDPS+ W CMFG+IEVP+QII +GVI CQAPP LPGKVTLC+TS NRESCSEVREFEY P+S H L + EA+K +ELL LV+FVQMLL DP++ K + S I+LLG + +E+ W VIE+LL G+ TSS +WLLQELLKDKL QWLSSR Q+ ++ G S SKKEQGIIHMVAG+G+EWAL PILNSGV++N+RD NG+TALHWAARFGRE+MVAALIASGASA AVTDP + TGKT A IAA G+ GLAGYLSEV+LTSHLSSLT+ ESELSK SA +EAE T+++IS S TSEDQQS +D+LAAVRN +AAARIQ+AFRAHSFRKR+ KEAAAAA S D+Y ++SND Q +SAASKL FRN R++N AALSIQK YRGWK R+DFLAFRQKVVKIQAHVRG+QVRK YKVICWAV +LEKVVLRWRR GVGLRGFR ESE ID + DEDI+ VFRKQK+ ++I+EAV+RVLSMV S +ARQQYRRML++YRQAKAELG A E STS D+S+MESD
Sbjct: 277 EGENGEHSHQTLGHEFRVERKESISWKEMLEFCKSSHDVESQEKHLYTSDANGMIGPPLREGPIEELEDSHWLDFGGNN--AQKSSMLLPQEVENFEFPAYSPATNTHETNSGYYTTLFDQGLIGISLEADSSLTISQKQTFTIREISPEWGYASEATK----------------------------------VIIIGSFLCDPSECAWNCMFGDIEVPIQIIQEGVICCQAPPHLPGKVTLCITSGNRESCSEVREFEYCVKPTSCAHCNLPQTEATKTPDELLLLVKFVQMLLYDPMMQKGDNKKSEIDLLGKFKASEDSWDHVIEALLVGSWTSSSTTDWLLQELLKDKLHQWLSSRYQEGHEQAGCSLSKKEQGIIHMVAGLGFEWALNPILNSGVSINFRDINGWTALHWAARFGREKMVAALIASGASAGAVTDPNSQDLTGKTAAFIAATSGHKGLAGYLSEVALTSHLSSLTLEESELSKGSADVEAEITVDNISKWSLDTSEDQQSLKDTLAAVRNATQAAARIQSAFRAHSFRKRQQKEAAAAA-----ASVDEYGIVSNDIQEISAASKLAFRNVREHNTAALSIQKNYRGWKGRKDFLAFRQKVVKIQAHVRGYQVRKNYKVICWAVSVLEKVVLRWRRKGVGLRGFRQESEFID--DSDDEDILKVFRKQKVDVAIEEAVSRVLSMVESLDARQQYRRMLERYRQAKAELG-----CAETELTSTSQGDISSMESD 977
HSP 2 Score: 300.827 bits (769), Expect = 1.340e-83
Identity = 158/271 (58.30%), Postives = 192/271 (70.85%), Query Frame = 0
Query: 21 GYNLSDLVQEAQHRWLKPPEVLFILKNYEDSQLTDKPLQKPPGGSLFLFNKRVLRYFRKDGHSWRRKKDGRTVGEAHERLKVGNAEALNCYYAHGELNPNFQRRSYWMLEPAYEHIVLVHYRDITEVRHSGGSILQSSPGSYSTLNQSPSSYTTQVPGTTSFAPEFQEQIQILSNPGSVNGSFQSDIKNDMINISDVIERNEEIYSSPKVDINQALKRLTQQLSLEDNCSGDNESFYDDNGVSHDTEYNVHGQSSIFPNQLQDDSDHRIAQ 291
G N+ D QEAQ RWLKP EV IL+NY++ QLT +P Q+P GGSLFLFNKRVLR+FRKDGH+WR+KKDGRTVGEAHERLKVGN EALNCYYAHGE NP+FQRRSYWML+P YEHIVLVHYRDI+E RHS S+ S S ST +QSPSSYT Q PG+T E E Q LS+PGSV S IK++ ++ D +ER +I SS + + QALKRL +QLSL+D + F +N S+D +Y V QS + DS++ + Q
Sbjct: 4 GSNIDDFSQEAQTRWLKPAEVHSILRNYKEHQLTHEPPQRPAGGSLFLFNKRVLRFFRKDGHNWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNPSFQRRSYWMLDPVYEHIVLVHYRDISEGRHSSVSLSHLSAASPSTFSQSPSSYTAQHPGSTVVIGELYEPCQSLSSPGSVEVSSDVVIKSNGMDHLDRVERTGDISSSSEHKVTQALKRLEEQLSLDDESLEEIGPFDSENENSNDLKYIVRTQSYSGSVGMHADSNNHVLQ 274
Match: A0A5B7B5J5 ((Putative calmodulin-binding transcription activator 4 isoform X2 {ECO:0000313|EMBL:MPA64250.1}) (Fragment))
HSP 1 Score: 810.061 bits (2091), Expect = 0.000e+0
Identity = 455/750 (60.67%), Postives = 542/750 (72.27%), Query Frame = 0
Query: 391 EGDGKGHYWQPFEDDFSCNEENAILN--ELLGSYNNAAPAGSQETHLHIPNENEAFLSPSSKKPVEEEESFEWADLAVNDTFSCPTSVLLPEEAEYFKIATYSPSMNVYGINSDHYSTVFEQVPTERPLEENPSLTVSQKQLFTIHEISPEWGYAHEATKPPGCLMIECEGDMVFMKYCLNGIMPMTMSHEAIKVIVIGSFLCDPSDHVWTCMFGEIEVPVQIIHDGVIRCQAPPSLPGKVTLCLTSSNRESCSEVREFEYRECPSSLPHSKLLEAEASKDSEELLFLVRFVQMLLSDPLISKREISGSGIELLGNVEGNEELWSGVIESLLAGNCTSSGIANWLLQELLKDKLQQWLSSRLQQVNDLQGGSFSKKEQGIIHMVAGMGYEWALKPILNSGVNVNYRDTNGFTALHWAARFGREEMVAALIASGASAEAVTDPTKEAPTGKTPASIAAEYGYLGLAGYLSEVSLTSHLSSLTIAESELSKNSASLEAERTINSISDISTITSEDQQSFRDSLAAVRNTAEAAARIQAAFRAHSFRKRKLKEAAAAAFMANVDSQDQYSLLSNDAQSLSAASKLFFRNTRDYNNAALSIQKKYRGWKSRRDFLAFRQKVVKIQAHVRGHQVRKYYKVICWAVGILEKVVLRWRRGGVGLRGFRNESESIDGIEDKDEDIVTVFRKQKI-LSIDEAVARVLSMVTSSEARQQYRRMLDKYRQAKAELGGPANAAAAGEAASTSL-DMSNMESD 1136
+GD HY Q + S E N L+ E+L ++ SQE HL+ + N+ + PS K+ VEE E W D N+ + S+L P+E E FK Y+P+ N + NS +Y+T+F+Q LE + S+T+++KQ FTI EISPEWGYA EATK VI+IGSFLCDPS+ WTCMFG+IEVP+QII +GVI CQAPP LPG VTLC+TS NRESCSE+REFEY + H L + EA+K EELL LVRFVQMLLSDP++ K + S SG +LLG + E+ W VIE+LL G+ TSS +WLLQELLKDKLQ WLSSR Q+ + G S SKKEQGIIHMVAG+G+EWAL PILNSGV++N+RD NG+TALHWAARFGRE+MVAALIASGASA AVTDP + PTGKT A+IAA G+ G+AGYLSEV+L SHLSSLT+ ESELSK SA +EAE T+++IS S SEDQ S +D+LAAVRN A+AAARIQ+AFRAHSFRKR+ KEAAAAA A+V D+Y +LSND LSAASKL FRN RDYN AALSIQKKYRGWK RRDFLAFRQKVVKIQAHVRGHQVRK YKVICWAV +LEKVVLRWRR GVGLRGFR ESE ID E +DEDI+ +FRKQK+ ++I+EAV+RVLSMV S EARQQYRRML++YRQAKAEL G A EA STS D+S+ME+D
Sbjct: 153 KGDSGEHYHQTLGHE-STVESNESLSWKEMLEFSKSSPDIESQEKHLYTLDGNKMLVPPSRKESVEELEDSHWLDFCGNN--AEKASLLPPQEVENFKFPAYTPATNTHETNSGYYTTLFDQDQIAMSLEADSSITIAEKQKFTIREISPEWGYASEATK----------------------------------VIIIGSFLCDPSECEWTCMFGDIEVPIQIIQEGVICCQAPPHLPGNVTLCITSGNRESCSELREFEYCVKQTKCAHCSLQQTEATKTPEELLLLVRFVQMLLSDPMMQKGDNSESGTDLLGKFKTGEDSWGHVIEALLVGSWTSSTTTDWLLQELLKDKLQLWLSSRYQEGYEETGCSLSKKEQGIIHMVAGLGFEWALNPILNSGVSINFRDINGWTALHWAARFGREKMVAALIASGASAGAVTDPNSQDPTGKTAATIAATSGHKGIAGYLSEVALISHLSSLTLEESELSKGSADVEAEITVDNISKRSLNMSEDQLSLKDTLAAVRNAAQAAARIQSAFRAHSFRKRQQKEAAAAAAAASV---DEYGILSNDIHELSAASKLAFRNVRDYNTAALSIQKKYRGWKGRRDFLAFRQKVVKIQAHVRGHQVRKNYKVICWAVSVLEKVVLRWRRKGVGLRGFRQESEFID--EREDEDILKLFRKQKVDVAIEEAVSRVLSMVESLEARQQYRRMLERYRQAKAELEG-----AETEATSTSQGDVSSMEND 855
HSP 2 Score: 76.2554 bits (186), Expect = 2.626e-11
Identity = 63/150 (42.00%), Postives = 89/150 (59.33%), Query Frame = 0
Query: 142 RDITEVRHSGGSILQSSPGSYSTLNQSPSSYTTQVPGTTSFAPEFQEQIQILSNPGSVNGSFQSDIKNDMINISDVIERNEEIYSSPKVDINQALKRLTQQLSLEDNCSGDNESFYDDNGVSHDTEYNVHGQSSIFPNQLQDDSDHRIAQ 291
R+I+E RHS GS+ SSPGS ST +QSPSSYT Q G+ E E Q LS+PGS+ S IK++ ++ D IER +I SS + +++Q L L QLSL D+ D FY + S+D +Y VH Q+ +QD+S++ + Q
Sbjct: 1 REISEGRHSSGSLSHSSPGSPSTFSQSPSSYTAQHLGSKVVTGELYEPYQNLSSPGSLEVSSDVVIKSNGMDHLDGIERTGDISSSSEHEVSQTLGWLEAQLSLNDDSLEDIGPFYGEKENSNDLKYMVHDQNYNGSAVMQDNSNNHVLQ 150
| Match Name | Stats | Description |
|---|---|---|
| A0A2I4DIQ4 | E-Value: 0.000e+0, PID: 53.78 | (calmodulin-binding transcription activator 4-like... [more] |
| A0A6P9E4Z6 | E-Value: 0.000e+0, PID: 53.60 | (calmodulin-binding transcription activator 4-like... [more] |
| A0A6P6BGX0 | E-Value: 0.000e+0, PID: 49.49 | (calmodulin-binding transcription activator 4-like... [more] |
| A0A2N9HFF5 | E-Value: 0.000e+0, PID: 52.31 | CG-1 domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A834G7X2 | E-Value: 0.000e+0, PID: 48.42 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7124... [more] |
| A0A4U5NNK9 | E-Value: 0.000e+0, PID: 48.36 | (Calmodulin-binding family protein {ECO:0000313|EM... [more] |
| A0A834L8F6 | E-Value: 0.000e+0, PID: 50.63 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7123... [more] |
| A0A6P6BGX5 | E-Value: 0.000e+0, PID: 46.27 | (calmodulin-binding transcription activator 4-like... [more] |
| A0A5J5AFJ3 | E-Value: 1.340e-83, PID: 59.68 | CG-1 domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A5B7B5J5 | E-Value: 2.626e-11, PID: 60.67 | (Putative calmodulin-binding transcription activat... [more] |
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An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |
