DCAR_027130

Resource Type: 
Polypeptide
Name: 
DCAR_027130
Identifier: 
DCAR_027130.mRNA-protein
Sequence: 
MASMVAKACNSNSSQLSSISVQEKGSRNKRKFRADPPVSDASKTVSVPLS
DCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPF
EAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLV
DCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQD
FDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMES
DSFGSFLGDGVPNGAVTAPVQPQARTEARGSENLQISGRQNPSFACACHF
PSESSIMATVPCLHNSPEAPTMTVRSNFKPRNSSAQNGLVAEKETAGSIE
KPFTAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGS
KGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQD
TLHNDLLNTNGLPPTFSLDTVNNTISSIPKTNFVSAIPTISDQNSLPAPD
TELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDES
IMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEV
ERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLR
QEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKH
RKTQLQHKLEQATELLDHQEARCKREEMAIEELLTQAMSLKKEREQSEVS
AKSKENIIRVKAEKKLQKFKDDIEKHEKEISQLRSKMDSSKIAALRKGID
GSYASRLIDSQTPTKESTKSYSSRMVNNFEDHSGAGGVKRERECVMCLSE
EMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSTIIKRIPVHFSRS*
Sequence Length: 
899
Sequence Checksum: 
05dfca2dea60772335f88b2534c9c271
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, DCAR_027130, derives from mRNA, DCAR_027130.
Loading content
Blast Results: 
The following BLAST results are available for this feature:
BLAST of DCAR_027130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_027130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HFY2 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 1201.42 bits (3107), Expect = 0.000e+0
Identity = 618/914 (67.61%), Postives = 732/914 (80.09%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQL-SSISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSE-NLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKE----TAGSIEKPFTAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDT-LHNDLLNTN-GLPPT--FSLDTVNNTISSIPKTNFV-SAIPTISDQNSL-PAPDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQEARCKREEMAIEELLTQAMSLKKEREQSEVSAKSKENIIRVKAEKKLQKFKDDIEKHEKEISQLRSKMDSSKIAALRKGIDGSYASRLID-SQTPT-KESTKSYSSRMVNNFEDHSGAGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSTIIKRIPVHFSRS 898
            MASMVAKA  S++SQL  ++ VQEKGSRNKRKFRADPP+ D +K VS+P S+CSSYEFSAEK +I+ +HGH  GCDMC +S+ H+DALKLDLGL+ AVG  E G S+ +EE    DE HDADWSDLTESQLEELVL+NLDTIF+ AIKK+V  GY+EE AT+AVLRSGLCYGCKDTVSNIV+NTLAFLRNGQE+D +RE  F+DLQQMEKYILAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACAM+ D   S +GDG P G  + P QPQ RTEAR SE NL    + +PS AC+     E++ MA++P  H+S  E PT++   NF KP+NS   NG++ EK+    T+  ++K    VG T S A EEKF+GSRKISGITKREYILR KS+ LEKSYRTYGSKG SR GKLSSFGGLILDKK+KS++DST ++V+NA+LKISK +G  +PQD   HN  L+TN GLP +  F+++TVN  IS++PKTN + S++PT+S   +L  A DTELSLS  +KN + P+P S ++ A    Y+G P +K  GQWVPQDKKDE I+KL PRV+ELQNQ+QEWTEWAN KVMQAARRL KDKAELKTL+QEKEEVERLKK+KQ LEE+TMKKL EMENALCKASGQV+RAN AVRRLE+EN+ LRQEMEAAKL+A++SAASCQEVSKREK TLMK QSWEKQK  FQEE+VAEK +  QLQ + +QA  L D  EAR K+EE A EELL+QA S+KKEREQ E SAKS+E++I++KAE  LQK+KDDI+K E EISQLR K DSSKIAALR+GIDGSYASRL D + +PT KES     S +V  F ++SG GGVKRERECVMCLSEEMSVVFLPCAHQVVC TCNELHEKQGMKDCPSCRS I +RI V ++RS
Sbjct:    1 MASMVAKASGSSTSQLLPAMPVQEKGSRNKRKFRADPPIGDPNKIVSLPQSECSSYEFSAEKFEIIPSHGHPSGCDMCSISQDHSDALKLDLGLSTAVGSTEGGPSRSREEIEAADEFHDADWSDLTESQLEELVLSNLDTIFRGAIKKIVAHGYSEEIATKAVLRSGLCYGCKDTVSNIVDNTLAFLRNGQEIDWSREHYFEDLQQMEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDPISSLVGDGCPEGGNSVPAQPQLRTEARSSELNLPNPCKPSPSIACSHTCKCETASMASIPFAHSSQSETPTVSGIPNFVKPKNSFVVNGVIPEKDSPISTSDGVDKSVGVVGTTQSHAHEEKFVGSRKISGITKREYILRQKSLHLEKSYRTYGSKGSSRVGKLSSFGGLILDKKLKSLSDSTSVNVKNASLKISKTIGVDVPQDNGTHNLSLSTNVGLPSSVAFNVETVN-PISTLPKTNNIPSSLPTVSTPPALSAAADTELSLSFPTKNIAAPIPISSNAEANNSSYAGVPFDKSLGQWVPQDKKDEMILKLFPRVQELQNQLQEWTEWANHKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLEESTMKKLSEMENALCKASGQVDRANTAVRRLEIENAALRQEMEAAKLRASESAASCQEVSKREKKTLMKFQSWEKQKTWFQEEIVAEKRKLAQLQQEQDQAKYLRDQLEARWKQEEKAKEELLSQANSIKKEREQIEASAKSEEDMIKLKAETNLQKYKDDIKKLEIEISQLRLKTDSSKIAALRRGIDGSYASRLTDITNSPTPKESQMLCISGIVTKFPEYSGTGGVKRERECVMCLSEEMSVVFLPCAHQVVCMTCNELHEKQGMKDCPSCRSPIQRRICVRYARS 913    
BLAST of DCAR_027130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7ABU1 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 1195.65 bits (3092), Expect = 0.000e+0
Identity = 610/911 (66.96%), Postives = 717/911 (78.70%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQLS-SISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSE-NLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKETAGSI----EKPF---TAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLPP--TFSLDTVNNTISSIPKTNFVSAIPTISDQNSLPAPDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQEARCKREEMAIEELLTQAMSLKKEREQSEVSAKSKENIIRVKAEKKLQKFKDDIEKHEKEISQLRSKMDSSKIAALRKGIDGSYASRLIDSQTPTKESTKSYSSRMVNNFEDHSGAGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSTIIKRIPVHFSRS 898
            MASMVAKA +S +SQ+S +ISVQEKGSRNKRKF+ADPP+ D +K +S+P ++C SYEFSAEK +I  +HGH   CDMC +++ H DALKLDLGL+ AVG  E G S  +EE    DE HDADWSDLTESQLEELVL NLDTIF S IKK+V CGY+EE A +AVLRSGLCYGCKDTVSNIV+NTLAFLRN QE+DP+RE  F+DLQQMEKYILAELVCV+ EV+PFFSTGDAMWCLL+CDMNVS A AM+ D   S LGDG PNG  +    PQ RTE + SE NL    + NPS ACA +  SE+  MA++PC H+S  E PTM V  N  K +N    NGLV EKE   SI    +K F   +  G +HS A+EEKF GSRKISGITKREYILR KS++LE +YRTYG+KG SRAGKLS FGGL+LDKK+KSV+DS G++V+NA+LK SK MG  +PQD  +++L    GLP    F+ DTVN  + ++ KTN  SA+P+++    L A DTELSLSL +K+N   MP   ++ AP   Y+  P +K  GQW+PQDKKDE I+KL PRV+ELQNQ+QEWTEWANQKVMQAARRL KDKAELKTL+QEKEEVERLKK+KQ LEENTMKKL EMENALCKASGQVERAN+ VRRLEVEN+ LRQ+M+AAKL+AA+SAASCQEVSKREK TLMK QSWEKQK +FQEELVAEK +  QLQ  LEQA +L D  EAR K+EE A EELLT A S++KEREQ E S+KSKEN+I++KAE  L+++KDDIEK EKEIS+LR K DSSKIAALR+GIDGSYASRL D +       +SY SRMV +F+D+SG GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEK+GMKDCPSCRS I +RI V ++RS
Sbjct:    1 MASMVAKASSSITSQVSPAISVQEKGSRNKRKFQADPPLGDPNKILSLPQNECLSYEFSAEKFEITPSHGHPSVCDMCSINQDHFDALKLDLGLSSAVGSSEVGPSHPREEIEAADEFHDADWSDLTESQLEELVLRNLDTIFMSGIKKIVACGYSEEVAMKAVLRSGLCYGCKDTVSNIVDNTLAFLRNNQEVDPSREHYFEDLQQMEKYILAELVCVLHEVRPFFSTGDAMWCLLICDMNVSHAFAMDGDPLSSVLGDGAPNGISSVSAHPQLRTEVKSSELNLPNPCKPNPSGACAHNCQSETPTMASIPCAHSSQSETPTMAVVPNLTKTKNPPVLNGLVPEKEIPNSISDAVDKSFGVDSVEGTSHSPAAEEKFGGSRKISGITKREYILRQKSLRLENNYRTYGTKGSSRAGKLSGFGGLMLDKKLKSVSDSIGVNVKNASLKTSKVMGVDMPQDNGNHNLSTKIGLPSPVAFNTDTVN-VVPNLAKTNVQSALPSVNAAPVLSAADTELSLSLPTKSNDALMPIGSNAEAPNCSYARVPYDKSLGQWIPQDKKDEMILKLVPRVKELQNQLQEWTEWANQKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLEENTMKKLSEMENALCKASGQVERANSTVRRLEVENAALRQDMDAAKLRAAESAASCQEVSKREKRTLMKFQSWEKQKTVFQEELVAEKRKLVQLQQDLEQAKDLRDQLEARWKQEEKAKEELLTHASSVRKEREQIESSSKSKENMIKMKAENNLKRYKDDIEKLEKEISKLRLKTDSSKIAALRRGIDGSYASRLTDIRN-APAFKESYVSRMVTDFQDYSGTGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKKGMKDCPSCRSPIQRRICVRYARS 909    
BLAST of DCAR_027130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438F6Z1 ((Putative E3 ubiquitin-protein ligase RF298 {ECO:0000313|EMBL:RVW55686.1}))

HSP 1 Score: 1139.02 bits (2945), Expect = 0.000e+0
Identity = 587/913 (64.29%), Postives = 708/913 (77.55%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQLS-SISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFL-GDGVPNGAVTAPVQPQARTEARGSENLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKE----TAGSIEKPFTAVGPTHSSASEEKFIGSRKI-SGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLPPT--FSLDTVNNTISSIPKTNFVSAIPTISDQNSLPAP---DTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQEARCKREEMAIEELLTQAMSLKKEREQSEVSAKSKENIIRVKAEKKLQKFKDDIEKHEKEISQLRSKMDSSKIAALRKGIDGSYASRLIDSQTPT--KESTKSYSSRMVNNFEDHSGAGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSTIIKRIPVHFSR 897
            M+SM     +S  +Q S S+S QEKGSRNKRKFRADPP+ D +K VS     C SYEFSAEK ++  +HG  G C MC++++ H+D LKLDLGL+ A G  E G S+ ++E +  D+  DADWSDLTESQLEELVL+NLDTIFKSAIKK+V CGY+EE AT+AVLRSGLCYGCKDTVSNIV+NTLAFLRNGQE+DP+RE  FDDLQQ+EKYILAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACAM+ DSF S + GDG  NG+ +   QPQ++TEA+ SE                + P+  + + ++PC H+S  E P  +   N  KP+NS   NGLV+EK+    T+ + +K F+  G + S+A EEKF  SRK+ SG TKRE +LR KS+ LEK+YRTYG KG SR  KLS  G  +LDKK+KSV+DSTG++++NA+LKISK MG  +PQD  +++L   +GL  +  F+L+TVN TI S+PKTN  SA+P +   N+ P P   DTELSLSL++K+NS  +P SC++      Y+G P +K  GQWVPQDKKDE I+KL PRVRELQNQ+QEWTEWANQKVMQAARRL KDKAELKTL+QEKEEVERLKK+KQ LE+NT KKL EMENAL KASGQVERANAAVRRLEVENS+LRQEMEAAKL+AA+SAASCQEVSKREK TLMK Q+WEKQK  F EEL +EK R  QL+ +LEQATEL D  EAR K+EE A EELL QA S +KEREQ EVSAKSKE++I++KAE  LQK+KDDI+K EK+IS+LR K DSSKIAALR+GIDGSYASRL D+   +  KES   + S MV NF +++G+GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRS I +RI + ++R
Sbjct:    1 MSSMAVNGSSSCGTQGSPSVSAQEKGSRNKRKFRADPPLGDPNKIVSSQ-DQCLSYEFSAEKFEVTSSHGQPGACGMCNLNQDHSDGLKLDLGLSSAAGSSEVGPSQPRDE-LEADDFQDADWSDLTESQLEELVLSNLDTIFKSAIKKIVACGYSEEVATKAVLRSGLCYGCKDTVSNIVDNTLAFLRNGQEIDPSREHYFDDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDSFSSIVSGDGASNGSSSTSGQPQSKTEAKSSE---------------LNLPNPCNPVHSIPCAHSSQSETPIASGVPNLAKPKNSLVLNGLVSEKDGLNNTSDTTDKSFSVTGTSQSAAPEEKFGLSRKVHSGGTKRESMLRQKSLHLEKNYRTYGCKGSSRTAKLSGLGSYMLDKKLKSVSDSTGVNLKNASLKISKAMGVDVPQDNGNHNLSPNSGLSSSAAFNLETVN-TIGSLPKTNSPSALPPV---NTPPIPSGADTELSLSLTTKSNSASVPLSCNAETSNCNYTGIPYDKSLGQWVPQDKKDEMILKLVPRVRELQNQLQEWTEWANQKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLEDNTAKKLSEMENALGKASGQVERANAAVRRLEVENSSLRQEMEAAKLEAAESAASCQEVSKREKKTLMKFQTWEKQKAFFHEELTSEKRRLAQLRQELEQATELQDQLEARWKQEEKAKEELLMQASSTRKEREQIEVSAKSKEDMIKLKAEANLQKYKDDIQKLEKQISELRLKTDSSKIAALRRGIDGSYASRLTDTTNGSAHKESQAPFISEMVTNFHNYAGSGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRIRIRYAR 892    
BLAST of DCAR_027130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6HDJ7 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 1138.64 bits (2944), Expect = 0.000e+0
Identity = 586/912 (64.25%), Postives = 706/912 (77.41%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQLSSISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFL-GDGVPNGAVTAPVQPQARTEARGSENLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKE----TAGSIEKPFTAVGPTHSSASEEKFIGSRKI-SGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLPPT--FSLDTVNNTISSIPKTNFVSAIPTISDQNSLPAP---DTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQEARCKREEMAIEELLTQAMSLKKEREQSEVSAKSKENIIRVKAEKKLQKFKDDIEKHEKEISQLRSKMDSSKIAALRKGIDGSYASRLIDS--QTPTKESTKSYSSRMVNNFEDHSGAGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSTIIKRIPVHFSR 897
            MA   +  C +  S   S+S QEKGSRNKRKFRADPP+ D +K VS     C SYEFSAEK ++  +HG  G C MC++++ H+D LKLDLGL+ A G  E G S+ ++E +  D+  DADWSDLTESQLEELVL+NLDTIFKSAIKK+V CGY+EE AT+AVLRSGLCYGCKDTVSNIV+NTLAFLRNGQE+DP+RE  FDDLQQ+EKYILAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACAM+ DSF S + GDG  NG+ +   QPQ++TEA+ SE                + P+  + + ++PC H+S  E P  +   N  KP+NS   NGLV+EK+    T+ + +K F+  G + S+A EEKF  SRK+ SG TKRE +LR KS+ LEK+YRTYG KG SR  KLS  G  +LDKK+KSV+DSTG++++NA+LKISK MG  +PQD  +++L   +GL  +  F+L+TVN TI S+PKTN  SA+P +   N+ P P   DTELSLSL++K+NS P+P SC++      Y+G P +K  GQWVPQDKKDE I+KL PRVRELQNQ+QEWTEWANQKVMQAARRL KDKAELKTL+QEKEEVERLKK+KQ LE+NT KKL EMENAL KASGQVERANAAVRRLEVENS+LRQEMEAAKL+AA+SAASCQEVSKREK TLMK Q+WEKQK  F EEL +EK R  QL+ +LEQATEL D  EAR K+EE A EELL QA S +KEREQ EVSAKSKE++I++KAE  LQK+KDDI+K EK+IS+LR K DSSKIAALR+GIDGSYASRL D+   +  KES   + S MV NF +++G+GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRS I +RI + ++R
Sbjct:    1 MAVNGSSTCGTQGS--PSVSAQEKGSRNKRKFRADPPLGDPNKIVSSQ-DQCLSYEFSAEKFEVTSSHGQPGACGMCNLNQDHSDGLKLDLGLSSAAGSSEVGPSQPRDE-LEADDFQDADWSDLTESQLEELVLSNLDTIFKSAIKKIVACGYSEEVATKAVLRSGLCYGCKDTVSNIVDNTLAFLRNGQEIDPSREHYFDDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDSFSSIVSGDGASNGSSSTSGQPQSKTEAKSSE---------------LNLPNPCNPVHSIPCAHSSQSETPIASGVPNLAKPKNSLVLNGLVSEKDGLNNTSDTTDKSFSVTGTSQSAAPEEKFGLSRKVHSGGTKRESMLRQKSLHLEKNYRTYGCKGSSRTAKLSGLGSYMLDKKLKSVSDSTGVNLKNASLKISKAMGVDVPQDNGNHNLSPNSGLSSSAAFNLETVN-TIGSLPKTNSPSALPPV---NTPPIPSGADTELSLSLTTKSNSAPVPLSCNAETSNCSYTGIPYDKSLGQWVPQDKKDEMILKLVPRVRELQNQLQEWTEWANQKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLEDNTAKKLSEMENALGKASGQVERANAAVRRLEVENSSLRQEMEAAKLEAAESAASCQEVSKREKKTLMKFQTWEKQKAFFHEELTSEKRRLAQLRQELEQATELQDQLEARWKQEEKAKEELLMQASSTRKEREQIEVSAKSKEDMIKLKAEANLQKYKDDIQKLEKQISELRLKTDSSKIAALRRGIDGSYASRLTDTINGSAHKESQAPFISEMVTNFHNYAGSGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRIRIRYAR 889    
BLAST of DCAR_027130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5ACQ3 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8527526.1}))

HSP 1 Score: 1125.92 bits (2911), Expect = 0.000e+0
Identity = 582/872 (66.74%), Postives = 692/872 (79.36%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQLSSIS-VQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSE-NLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKETAGS----IEKPFTAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLPP--TFSLDTVNNTISSIPKTNFVSAIPTISDQNSLPAPDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQEARCKREEMAIEELLTQAMSLKKEREQSEVSAKSKENIIRVKAEKKLQKFKDDIEKHEKEISQLRSKMDSSKIAALRKGIDGSYASRLIDSQTPTKESTKSYSSRMVNNFEDHSGAGGVKRERECVMCLSEEMSVVFLPCAHQ 862
            MASMVAKA +S ++Q+S  + VQEKGSRNKRKF+ADPP+ D +K +S+P ++C SYEFSAEK +I  ++GH  GCDMC +S+ H+DALKLDLGL+  +G  E G S  +EE    DE HDADWSDLTESQLEELVL NLDTIFKSAIKK+   GY+EE AT+AVLRSGLCYGCKDTVSN+V+NTLAFL NGQE+DP+RE  F+DLQQMEKY+LAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACAM+ D   S LGDGV   +V+A  +PQ RTEA+ SE NL      NPS ACA +  SE   +A++PC H+S  E PTM V  N  K +NS   NGLV EKE+  S    ++KPF   G + S A EEK   SRKISGITKREY+LR KS+ LEK+YRTYGSKG SRAGKLS FGGL+LDKK+KSV+DS G++V+NA+LKISK MG  +PQD  +++L    GLP    F+L+TVN  + ++PKTN  SA+P ++    L A DTELSLSL +K+N  PMP S    AP   Y+  P +KP GQW+PQDKKDE I+KL PRV ELQNQ+QEWTEWANQKVMQAARRL KDKAELKTL+QEKEEVERLKK+KQ LEENTMKKL EMENALCKASGQV+RAN+AV+ LEVEN+ LRQEM+AAKL+AA+SAASCQEVSKREK TLMK QSWEKQK +FQEELVAEK +  QL+H+LEQA +L D  EAR K+EE A EELLTQ+ S+KKEREQ E +AKSKE++I++KAE  L+++KDDIEK EKEISQLR K DSSKIAALR+GIDGSYASRL D +     + +SY SRMV +F+D++G GGVKRERECVMCLSEEMSVVFLPCAHQ
Sbjct:   39 MASMVAKASSSITTQVSPATLVQEKGSRNKRKFQADPPLGDPNKIISLPQNECQSYEFSAEKFEIAPSNGHPSGCDMCGISQDHSDALKLDLGLSSGLGSSEVGPSHPREEIEAADEFHDADWSDLTESQLEELVLINLDTIFKSAIKKIFTYGYSEEVATKAVLRSGLCYGCKDTVSNVVDNTLAFLGNGQEIDPSREHYFEDLQQMEKYVLAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDPLSSVLGDGV--SSVSA--RPQLRTEAKSSELNLP-----NPSSACAHNCQSEIPTVASIPCSHSSQSETPTMAVVPNLTKTKNSPVPNGLVPEKESPNSSSDAVDKPFAVAGTSQSPAPEEKLGASRKISGITKREYVLRQKSLHLEKNYRTYGSKGSSRAGKLSGFGGLLLDKKLKSVSDSPGVNVKNASLKISKAMGVDMPQDNGNHNLSTKVGLPSPVAFNLETVN-AVPNLPKTNVHSALPMVNAAPLLSAADTELSLSLPTKSNDAPMPISSIPEAPNCSYARVPCDKPPGQWIPQDKKDEMILKLVPRVHELQNQLQEWTEWANQKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLEENTMKKLSEMENALCKASGQVDRANSAVQTLEVENAALRQEMDAAKLRAAESAASCQEVSKREKKTLMKFQSWEKQKTLFQEELVAEKRKLVQLRHELEQAKDLRDQLEARWKQEEKAKEELLTQSSSVKKEREQIEAAAKSKEDMIKMKAENNLKRYKDDIEKLEKEISQLRLKTDSSKIAALRRGIDGSYASRLTDIRN-APSTKESYISRMVTDFQDYAGTGGVKRERECVMCLSEEMSVVFLPCAHQ 899    
BLAST of DCAR_027130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EIF1 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 1125.15 bits (2909), Expect = 0.000e+0
Identity = 592/914 (64.77%), Postives = 701/914 (76.70%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQL-SSISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSE-NLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKE----TAGSIEKPFTAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDT-LHNDLLNTN-GLPPT--FSLDTVNNTISSIPKTNFV-SAIPTISDQNSL-PAPDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQEARCKREEMAIEELLTQAMSLKKEREQSEVSAKSKENIIRVKAEKKLQKFKDDIEKHEKEISQLRSKMDSSKIAALRKGIDGSYASRLID-SQTPT-KESTKSYSSRMVNNFEDHSGAGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSTIIKRIPVHFSRS 898
            MASMVAKA  S++SQL  ++ VQEKGSRNKRKFRADPP+ D +K VS+P S+CSSYEFSAEK +I+ +HGH  GCDMC +S+ H+DALKLDLGL+ AVG  E G S+ +EE    DE HDADWSDLTESQLEELVL+NLDTIF  AIKK+V  GY+EE AT+AVLRSGLCYGCKDTVSNIV+NTLAFLRNGQE+D +RE  F+DLQQMEKYILAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACAM+ D   S +GDG P G  + P QPQ RTEAR SE NL    + +PS AC+     E++ MA++P  H+S  E  T++   NF KP+NS   NG++ EK+    T+  ++K    VG T S A EEKF+GSRKISGITKREYILR KS+ LEKSYRTYGSKG SR GKLSSFGGLILDKK+KS++DST ++V+NA+LKISK +G  +PQD   HN  L+TN GLP +  F+++TV N IS++PKTN + S++PT+S   +L  A DTELSLS  +KN + P+P S ++ A    Y+G P +K  GQWVPQDKKDE I+KL PRV+ELQNQ+QEWTEWAN KVMQAARRL KDKAELKTL+QEKEEVERLKK+KQ LEE+TMKKL EMENALCKASGQV+RAN AVRRLE+EN+ LRQEMEAAKL+A++SAASCQEVSKREK TLMK QSWEKQK  FQEE+VAEK +  QLQ + +QA  L D  E   +R+   I E   + M+LK                          K+KDDI+K E EISQLR K DSSKIAALR+GIDGSYASRL D + +PT KES     S +V  F ++SG GGVKRERECVMCLSEEMSVVFLPCAHQVVC TCNELHEKQGMKDCPSCRS I +RI V ++RS
Sbjct:    1 MASMVAKASGSSTSQLLPAMPVQEKGSRNKRKFRADPPIGDPNKIVSLPQSECSSYEFSAEKFEIIPSHGHPSGCDMCSISQDHSDALKLDLGLSTAVGSTEGGPSRSREEIEAADEFHDADWSDLTESQLEELVLSNLDTIFTGAIKKIVAHGYSEEIATKAVLRSGLCYGCKDTVSNIVDNTLAFLRNGQEIDWSREHYFEDLQQMEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDPLSSLVGDGCPEGGNSVPAQPQLRTEARSSELNLPNPCKPSPSIACSHTCKCETASMASIPFAHSSQSETSTVSGIPNFVKPKNSFVVNGVIPEKDSPISTSDGVDKSVGVVGTTQSHAHEEKFVGSRKISGITKREYILRQKSLHLEKSYRTYGSKGSSRVGKLSSFGGLILDKKLKSLSDSTSVNVKNASLKISKTIGVDVPQDNGTHNLSLSTNVGLPSSVAFNVETV-NPISTLPKTNDIPSSLPTVSTPPALSAAADTELSLSFPTKNIAAPIPISSNADANNSSYAGVPFDKSLGQWVPQDKKDEMILKLFPRVQELQNQLQEWTEWANHKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLEESTMKKLSEMENALCKASGQVDRANTAVRRLEIENAALRQEMEAAKLRASESAASCQEVSKREKRTLMKFQSWEKQKTWFQEEIVAEKRKLAQLQQEQDQAKYLRDKLET-FRRDCSNIPE--EKFMTLK--------------------------KYKDDIKKLEIEISQLRLKTDSSKIAALRRGIDGSYASRLTDITNSPTPKESQMLCISGIVTKFPEYSGTGGVKRERECVMCLSEEMSVVFLPCAHQVVCMTCNELHEKQGMKDCPSCRSPIQRRICVRYARS 884    
BLAST of DCAR_027130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2N9IUA4 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 1123.23 bits (2904), Expect = 0.000e+0
Identity = 578/921 (62.76%), Postives = 708/921 (76.87%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQLSS-ISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSENLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKE----TAGSIEKPFTAVGPTHSSASEEKFIGSRKI-SGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLPPTFS---LDTVN-NTISSIPKTNFVSAIPTISDQNSLPAP---------DTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQEARCKREEMAIEELLTQAMSLKKEREQSEVSAKSKENIIRVKAEKKLQKFKDDIEKHEKEISQLRSKMDSSKIAALRKGIDGSYASRLIDSQT-PTKESTKS-YSSRMVNNFEDHSGAGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSTIIKRIPVHFSRS 898
            MASMVA +  S++ QLSS +S+Q+KGSRNKRKFRADPP+ D +K +S+P ++C SYEFSAEK DI   HG    CD+C VS+ H+D LKLDLGL+ A G FE G  + +EE +  DE  DADWSDLTE++LEELVL+NLD IFKSAIKK++ CG+TEE AT+AVLRSGLCYGCKDTVSNIV+N L FLR+ QE+DP+R   F+DLQQ+EKY+LAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACAM+ D   SF+GDG  +G+       Q++TE +  E                + PS S  +    C H++  EAPT+    N  K +NS   NGLV+EK+    T+ +I+K F A G + S A EEKF GSRK+ S  TKREYILR KS+ +EK YRTYGSKG +R GKLS FGGLILDKK+KSV+DS  +++++A+LKI+K +G  +PQD   N  L+TN  P + +   L++V  NTIS++ KTN ++ +  +S   +LPAP         DTELSLSL +K+NS  +P+SC++      ++G P +K  GQWVP+DKKDE I+KL PRVRELQNQ+QEWTEWANQKVMQAARRLSK+KAELKTL+QEKEEVERLKK+KQ LEENTMKKL EMENALCKASGQVERAN+ VRRLEVEN+ LRQEMEAAKL+A +SAASC EVSKREK TL+K+QSWEKQK +FQEEL+ EK + TQL  +LEQA +L +  EAR K+EE A EELL QA S++KEREQ EVSAKSKE++I+ KAEK LQK+KDDI+K EKEISQLR K DSSKIAALR+GIDGSYASRL D +  P  + ++S Y S +V +F+D++G GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRS I +RI V ++RS
Sbjct:    1 MASMVATSSGSSTCQLSSSVSIQDKGSRNKRKFRADPPLGDPNKIISLPQNECPSYEFSAEKFDIAPGHGQPSACDLCSVSQDHSDGLKLDLGLSSAAGSFEVGPRRPREE-LEADEFQDADWSDLTEAELEELVLSNLDAIFKSAIKKIIACGHTEEVATKAVLRSGLCYGCKDTVSNIVDNALTFLRSSQEIDPSRGHCFEDLQQLEKYVLAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDPLSSFMGDGASSGSSYNSTHLQSKTETKSFE---------------LNLPSPSKQLN---CPHSTQSEAPTVAGVPNIMKSKNSLVLNGLVSEKDGMTTTSETIDKSFNAAGTSQSPAVEEKFGGSRKVHSSTTKREYILRQKSLHVEKHYRTYGSKGSTRGGKLSGFGGLILDKKLKSVSDSAAVNLKSASLKINKPVGVDVPQDN-GNHSLSTNSGPSSSAASNLESVTVNTISALSKTNTLTTLAAVSSPPALPAPNTPPSLSVADTELSLSLPTKSNSAMVPSSCNAEPSNCSFAGIPYDKSLGQWVPRDKKDEMILKLVPRVRELQNQLQEWTEWANQKVMQAARRLSKEKAELKTLRQEKEEVERLKKEKQTLEENTMKKLSEMENALCKASGQVERANSTVRRLEVENAQLRQEMEAAKLRATESAASCDEVSKREKKTLIKVQSWEKQKALFQEELITEKRKVTQLLQELEQAKDLEEQLEARWKQEEKAKEELLMQANSIRKEREQIEVSAKSKEDMIKSKAEKNLQKYKDDIQKLEKEISQLRLKTDSSKIAALRRGIDGSYASRLTDIRNGPDHQKSRSPYISEVVRDFQDYAGEGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRISVRYARS 901    
BLAST of DCAR_027130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4DKM4 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 1115.14 bits (2883), Expect = 0.000e+0
Identity = 581/904 (64.27%), Postives = 689/904 (76.22%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQ--LSSISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSENLQISG---RQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKETAGSIEKPFTAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLPPTFSLDTVNNTISSIPKTNFVSAIPTISDQNSLPAPDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQEARCKREEMAIEELLTQAMSLKKEREQSEVSAKSKENIIRVKAEKKLQKFKDDIEKHEKEISQLRSKMDSSKIAALRKGIDGSYASRLID-SQTPTKESTKSYSSRMVNNFEDHSGAGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSTIIKRIPVHFS 896
            M SMVAK  +S+S+   LS++ VQEKGSRNKRK+RADPP+ D +K VS+P ++CSSYEFSAEK +I   HGHS  CD+C +S+ H DALKLDLGL  +VG  E G S+ +EE     E HDADWSD TESQLEELVL N+D IFK+AIKK+V CGY+EE AT+AVLRSGLCYGCKDTVSNIV+NTLAFLRNGQE+D +RE  F+DLQQMEKYILAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACA++ D   S  GD  PNG+  A  Q Q+RTE  GS  L +S    +QN S ACA     E + MA++P  + S  +   ++   NF KP+NS              S++K F A+G T S A EEK  GSRKISGITKREY+LR KS+ LEK YRTYGSKG SRAGKL+ FG L+LD+K+K+V+DS   +++NA+LKISK MG  +PQD   N  L+TN          V +TIS+IP+ +  S + T+S   +L A D ELS SL +KN++ PMP + ++ AP   Y+G P +K  GQWVPQDKKDE I+KL PRV+ LQNQ+QEWTEWANQKVMQAARRLS+DKAELKTL+QEKEE ERLKK+KQ LEENTMKKL EMENAL KASGQVERAN  VRRLEVEN+TLR++ME AKL+AA+SAA+CQEV KREK TLMK QSWEKQK  FQEEL A+KH+  QLQ +LEQA ++ D  EAR K EE A EELLT A  ++KEREQ E SAKSKE++I++KAE  LQK K+DIEK EKEISQLRSK DSSKIAALR+GIDGSYASRL D    P KES   Y S +   F+++SG GGVKRERECVMCLSEEMSVVFLPCAHQVVCT CNELHEKQGMKDCPSCRS I +RI VH++
Sbjct:   86 MPSMVAKTTSSSSTSQVLSAMPVQEKGSRNKRKYRADPPIGDLNKVVSLPQNECSSYEFSAEKYEITPVHGHSSECDVCCLSQDHLDALKLDLGLPTSVGSSEVGPSQPREEIEAVHEFHDADWSDFTESQLEELVLINVDMIFKNAIKKIVGCGYSEEVATKAVLRSGLCYGCKDTVSNIVDNTLAFLRNGQEIDLSREHYFEDLQQMEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAVDGDILSSSAGDVGPNGSDCASTQAQSRTET-GSSELDLSSNPCKQNSSIACAHTCQCEIANMASIPSAYGSQSQTSAISGVPNFVKPKNS------------FDSVDKSFGAIGTTQSHAPEEKIGGSRKISGITKREYLLRQKSLHLEKCYRTYGSKGSSRAGKLNGFGSLVLDRKLKAVSDSACANLKNASLKISKTMGVDVPQDN-ENRKLSTN----------VGDTISTIPEISVPSTLHTVSTPPALSAADIELSPSLPTKNDAAPMPVTVNAVAPNCSYAGIPYDKSIGQWVPQDKKDEMILKLLPRVQGLQNQLQEWTEWANQKVMQAARRLSEDKAELKTLRQEKEEAERLKKEKQTLEENTMKKLTEMENALRKASGQVERANNTVRRLEVENATLRKDMEVAKLRAAESAANCQEVLKREKKTLMKFQSWEKQKTFFQEELAAQKHKLAQLQQELEQAKDIWDQLEARWKDEEEAKEELLTLASKIRKEREQIEASAKSKEDMIKLKAEANLQKCKEDIEKLEKEISQLRSKADSSKIAALRRGIDGSYASRLTDIRNAPAKESQTPYISVIATEFKEYSGIGGVKRERECVMCLSEEMSVVFLPCAHQVVCTNCNELHEKQGMKDCPSCRSPIQRRISVHYA 965    
BLAST of DCAR_027130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7GLH5 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 1113.6 bits (2879), Expect = 0.000e+0
Identity = 580/904 (64.16%), Postives = 688/904 (76.11%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQ--LSSISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSENLQISG---RQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKETAGSIEKPFTAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLPPTFSLDTVNNTISSIPKTNFVSAIPTISDQNSLPAPDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQEARCKREEMAIEELLTQAMSLKKEREQSEVSAKSKENIIRVKAEKKLQKFKDDIEKHEKEISQLRSKMDSSKIAALRKGIDGSYASRLID-SQTPTKESTKSYSSRMVNNFEDHSGAGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSTIIKRIPVHFS 896
            M SMVAK  +S+S+   LS++ VQEKGSRNKRK+RADPP+ D +K  S+P ++CSSYEFSAEK +I   HGHS  CD+C +S+ H DALKLDLGL  +VG  E G S+ +EE     E HDADWSD TESQLEELVL N+D IFK+AIKK+V CGY+EE AT+AVLRSGLCYGCKDTVSNIV+NTLAFLRNGQE+D +RE  F+DLQQMEKYILAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACA++ D   S  GD  PNG+  A  Q Q+RTE  GS  L +S    +QN S ACA     E + MA++P  + S  +   ++   NF KP+NS              S++K F A+G T S A EEK  GSRKISGITKREY+LR KS+ LEK YRTYGSKG SRAGKL+ FG L+LD+K+K+V+DS   +++NA+LKISK MG  +PQD   N  L+TN          V +TIS+IP+ +  S + T+S   +L A D ELS SL +KN++ PMP + ++ AP   Y+G P +K  GQWVPQDKKDE I+KL PRV+ LQNQ+QEWTEWANQKVMQAARRLS+DKAELKTL+QEKEE ERLKK+KQ LEENTMKKL EMENAL KASGQVERAN  VRRLEVEN+TLR++ME AKL+AA+SAA+CQEV KREK TLMK QSWEKQK  FQEEL A+KH+  QLQ +LEQA ++ D  EAR K EE A EELLT A  ++KEREQ E SAKSKE++I++KAE  LQK K+DIEK EKEISQLRSK DSSKIAALR+GIDGSYASRL D    P KES   Y S +   F+++SG GGVKRERECVMCLSEEMSVVFLPCAHQVVCT CNELHEKQGMKDCPSCRS I +RI VH++
Sbjct:    9 MPSMVAKTTSSSSTSQVLSAMPVQEKGSRNKRKYRADPPIGDLNKVASLPQNECSSYEFSAEKYEITPVHGHSSECDVCCLSQDHLDALKLDLGLPTSVGSSEVGPSQPREEIEAVHEFHDADWSDFTESQLEELVLINVDMIFKNAIKKIVGCGYSEEVATKAVLRSGLCYGCKDTVSNIVDNTLAFLRNGQEIDLSREHYFEDLQQMEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAVDGDILSSSAGDVGPNGSDCASTQAQSRTET-GSSELDLSSNPCKQNSSIACAHTCQCEIANMASIPSAYGSQSQTSAISGVPNFVKPKNS------------FDSVDKSFGAIGTTQSHAPEEKIGGSRKISGITKREYLLRQKSLHLEKCYRTYGSKGSSRAGKLNGFGSLVLDRKLKAVSDSACANLKNASLKISKTMGVDVPQDN-ENRKLSTN----------VGDTISTIPEISVPSTLHTVSTPPALSAADIELSPSLPTKNDAAPMPVTVNAVAPNCSYAGIPYDKSIGQWVPQDKKDEMILKLLPRVQGLQNQLQEWTEWANQKVMQAARRLSEDKAELKTLRQEKEEAERLKKEKQTLEENTMKKLTEMENALRKASGQVERANNTVRRLEVENATLRKDMEVAKLRAAESAANCQEVLKREKKTLMKFQSWEKQKTFFQEELAAQKHKLAQLQQELEQAKDIWDQLEARWKDEEEAKEELLTLASKIRKEREQIEASAKSKEDMIKLKAEANLQKCKEDIEKLEKEISQLRSKADSSKIAALRRGIDGSYASRLTDIRNAPAKESQTPYISVIATEFKEYSGIGGVKRERECVMCLSEEMSVVFLPCAHQVVCTNCNELHEKQGMKDCPSCRSPIQRRISVHYA 888    
BLAST of DCAR_027130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9U0F6 ((putative E3 ubiquitin-protein ligase RF298 {ECO:0000313|RefSeq:XP_011090901.1, ECO:0000313|RefSeq:XP_011090902.1}))

HSP 1 Score: 1107.43 bits (2863), Expect = 0.000e+0
Identity = 577/912 (63.27%), Postives = 701/912 (76.86%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQLSSISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEE-NVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSENLQISGRQNPSFACACHFPSESSIMATVPCLHN-SPEAPTMTVRSNFKPRNSSAQNGLVAEKETAGSI----EKP-FTAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLP--PTFSLDTVNNTISSIPKTNFVSAIPTI--SDQNSLPAPDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNE-KPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQEARCKREEMAIEELLTQAMSLKKEREQSEVSAKSKENIIRVKAEKKLQKFKDDIEKHEKEISQLRSKMDSSKIAALRKGIDGSYASRLID-SQTPT-KESTKSYSSRMVNNFEDHSGAGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSTIIKRIPVHFSRS 898
            MASMVAKAC+S SSQ+ +++VQEKGSRNKRKFRA+PP+SD SK + +P ++C+S+EFSAEK    ++HG + GCD+C +++  +DALKLDLGL+CAVG  E G S+ +EE     DE HDADWSDLTES+LEELVLNNLDTIFKSAIKK++  GY+EE AT+A+LRSGL YGCKDTVSNIV+NTLAFLR+GQE+DP+RE  F+DLQQMEKYILAELVC+++EV+PFFSTGDAMWCLL+CDMNVS ACAM+ D  G F  D   N   T   QPQ + E     N+    + N S A A H PSE+  +A+    H+   EAP +    N K + S   +GLV +K+   S     EKP F+A G +H++ +EEKF+GSRK+SGITKREYILR KS+  EK YRTYGSKG SRAGKLSSFGGL+LD+K+K VADSTG++ +N+  KI+K +G  +P + ++++L  T G    PTF L+ V+ + SS        A+P +  +   SLP  DTELSLS  +K+ + PMP S +  +    Y G  N+ K  GQW PQD+KDE IMKL PRVRELQNQ+QEWTEWANQKVMQAARRLSKDKAELKTL+QEKEEVERLKK+KQ LEENTMKKL EMENALCKASGQVERANAAVRRLEVEN+ LR+EMEAAKL+AA+SAASCQEVSKREK TLMK QSWEKQK +FQEEL  EK +  Q+Q KL+QA ++ D  E +  +EE A  ELLTQA S +KEREQ EVS +SKE++I+++AE  LQK+KDDIEK EK+ISQLR K DSSKIAALR+GIDGSYAS+L D   +P  K+S  SY SRMV +  D +G GGVKRERECVMCLSEEMSVVFLPCAHQVVCT CNELHEKQGMKDCPSCRS I +R+ V ++ +
Sbjct:    1 MASMVAKACSSTSSQMPAMTVQEKGSRNKRKFRAEPPLSDPSKAIPLPSNECTSFEFSAEKF---ESHGRTNGCDVCCINQDGSDALKLDLGLSCAVGTSEVGVSRPREEIEASADEFHDADWSDLTESELEELVLNNLDTIFKSAIKKIIASGYSEEVATKAILRSGLWYGCKDTVSNIVDNTLAFLRSGQEIDPSREHYFEDLQQMEKYILAELVCLLKEVRPFFSTGDAMWCLLICDMNVSHACAMDGDPLGGFPSDATTNSNSTVSAQPQLKAEFNSESNIFFPCKPNTSVAYAQHCPSETPNLASSHGGHSLQSEAPKIANGPNLKSKTSFVLHGLVPDKDCQNSTPNICEKPSFSAAGISHTAVTEEKFVGSRKVSGITKREYILRQKSMHFEKHYRTYGSKGTSRAGKLSSFGGLVLDEKLKGVADSTGINAKNSPFKINKAVGFDVPPENVNHNLSTTTGFSSVPTFGLEAVDQSSSS--------ALPLVPFNTSPSLPVADTELSLSFPAKSIANPMPISYNIESANCSYLGSSNDNKTLGQWAPQDRKDEMIMKLVPRVRELQNQLQEWTEWANQKVMQAARRLSKDKAELKTLRQEKEEVERLKKEKQTLEENTMKKLSEMENALCKASGQVERANAAVRRLEVENAALRREMEAAKLRAAESAASCQEVSKREKTTLMKFQSWEKQKTIFQEELSTEKWKLMQMQQKLQQAKDVKDQVEGKLNQEEKAKTELLTQASSFRKEREQIEVSTQSKEDMIKLRAESNLQKYKDDIEKLEKDISQLRLKTDSSKIAALRRGIDGSYASKLTDLRDSPALKDSAISYISRMVIS-TDLTGNGGVKRERECVMCLSEEMSVVFLPCAHQVVCTMCNELHEKQGMKDCPSCRSPIHRRVCVRYAHT 900    
Match NameStatsDescription
A0A7J7HFY2E-Value: 0.000e+0, PID: 67.61RING-type domain-containing protein {ECO:0000259|P... [more]
A0A5B7ABU1E-Value: 0.000e+0, PID: 66.96RING-type domain-containing protein {ECO:0000259|P... [more]
A0A438F6Z1E-Value: 0.000e+0, PID: 64.29(Putative E3 ubiquitin-protein ligase RF298 {ECO:0... [more]
F6HDJ7E-Value: 0.000e+0, PID: 64.25RING-type domain-containing protein {ECO:0000259|P... [more]
A0A5J5ACQ3E-Value: 0.000e+0, PID: 66.74(Uncharacterized protein {ECO:0000313|EMBL:KAA8527... [more]
A0A4S4EIF1E-Value: 0.000e+0, PID: 64.77RING-type domain-containing protein {ECO:0000259|P... [more]
A0A2N9IUA4E-Value: 0.000e+0, PID: 62.76RING-type domain-containing protein {ECO:0000259|P... [more]
A0A4S4DKM4E-Value: 0.000e+0, PID: 64.27RING-type domain-containing protein {ECO:0000259|P... [more]
A0A7J7GLH5E-Value: 0.000e+0, PID: 64.16RING-type domain-containing protein {ECO:0000259|P... [more]
A0A6I9U0F6E-Value: 0.000e+0, PID: 63.27(putative E3 ubiquitin-protein ligase RF298 {ECO:0... [more]

Pages

back to top
Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions.

For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins.

Data from this analysis can be viewed in JBrowse here.

Loading content